Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48814.t1 | RHN59424.1 | 93.4 | 558 | 33 | 2 | 1 | 558 | 66 | 619 | 3.70E-210 | 741.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48814.t1 | F4ISY0 | 39.2 | 536 | 254 | 11 | 2 | 524 | 3 | 479 | 1.3e-49 | 199.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48814.t1 | A0A072UHR5 | 93.4 | 558 | 33 | 2 | 1 | 558 | 1 | 554 | 2.7e-210 | 741.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene48814 | 0.856634 | 2.82E-62 | -1.69E-46 |
| MS.gene049159 | MS.gene48814 | 0.826736 | 2.30E-54 | -1.69E-46 |
| MS.gene049178 | MS.gene48814 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene48814 | 0.837439 | 5.20E-57 | -1.69E-46 |
| MS.gene049711 | MS.gene48814 | 0.801589 | 8.38E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene48814 | 0.807372 | 5.22E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene48814 | 0.835429 | 1.69E-56 | -1.69E-46 |
| MS.gene050020 | MS.gene48814 | 0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene48814 | 0.800641 | 1.31E-48 | -1.69E-46 |
| MS.gene050657 | MS.gene48814 | 0.81965 | 1.04E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene48814 | 0.837817 | 4.15E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene48814 | 0.823869 | 1.10E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene48814 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene050901 | MS.gene48814 | 0.809038 | 2.31E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene48814 | 0.820298 | 7.39E-53 | -1.69E-46 |
| MS.gene051021 | MS.gene48814 | 0.818045 | 2.41E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene48814 | 0.810254 | 1.26E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene48814 | 0.806627 | 7.51E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene48814 | 0.810446 | 1.15E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene48814 | 0.849583 | 2.95E-60 | -1.69E-46 |
| MS.gene051265 | MS.gene48814 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene48814 | 0.809104 | 2.23E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene48814 | 0.821239 | 4.49E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene48814 | 0.838002 | 3.72E-57 | -1.69E-46 |
| MS.gene051700 | MS.gene48814 | 0.808603 | 2.86E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene48814 | 0.877084 | 8.35E-69 | -1.69E-46 |
| MS.gene051720 | MS.gene48814 | 0.890063 | 1.38E-73 | -1.69E-46 |
| MS.gene051744 | MS.gene48814 | 0.830295 | 3.18E-55 | -1.69E-46 |
| MS.gene052020 | MS.gene48814 | 0.850204 | 1.98E-60 | -1.69E-46 |
| MS.gene052133 | MS.gene48814 | 0.830416 | 2.97E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene48814 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene48814 | 0.812818 | 3.50E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene48814 | 0.852597 | 4.16E-61 | -1.69E-46 |
| MS.gene052611 | MS.gene48814 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene052665 | MS.gene48814 | 0.861564 | 9.39E-64 | -1.69E-46 |
| MS.gene052732 | MS.gene48814 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene052773 | MS.gene48814 | 0.813455 | 2.54E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene48814 | 0.814021 | 1.90E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene48814 | 0.84507 | 5.11E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene48814 | 0.826631 | 2.44E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene48814 | 0.865222 | 6.91E-65 | -1.69E-46 |
| MS.gene053164 | MS.gene48814 | 0.820976 | 5.16E-53 | -1.69E-46 |
| MS.gene053174 | MS.gene48814 | 0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene053221 | MS.gene48814 | 0.817012 | 4.11E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene48814 | 0.824954 | 6.10E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene48814 | 0.849811 | 2.55E-60 | -1.69E-46 |
| MS.gene05423 | MS.gene48814 | 0.801805 | 7.57E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene48814 | 0.818463 | 1.93E-52 | -1.69E-46 |
| MS.gene054550 | MS.gene48814 | 0.813019 | 3.16E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene48814 | 0.868531 | 6.09E-66 | -1.69E-46 |
| MS.gene05458 | MS.gene48814 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene48814 | 0.803685 | 3.10E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene48814 | 0.81522 | 1.03E-51 | -1.69E-46 |
| MS.gene05468 | MS.gene48814 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene48814 | 0.826411 | 2.75E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene48814 | 0.884005 | 2.77E-71 | -1.69E-46 |
| MS.gene055466 | MS.gene48814 | 0.884049 | 2.67E-71 | -1.69E-46 |
| MS.gene055467 | MS.gene48814 | 0.801838 | 7.45E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene48814 | 0.872583 | 2.84E-67 | -1.69E-46 |
| MS.gene055469 | MS.gene48814 | 0.863445 | 2.48E-64 | -1.69E-46 |
| MS.gene055512 | MS.gene48814 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene48814 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene48814 | 0.853813 | 1.86E-61 | -1.69E-46 |
| MS.gene055580 | MS.gene48814 | -0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene055608 | MS.gene48814 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene48814 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene48814 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene055861 | MS.gene48814 | -0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene055890 | MS.gene48814 | 0.816033 | 6.81E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene48814 | 0.817776 | 2.77E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene48814 | -0.831895 | 1.29E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene48814 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene48814 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene48814 | 0.828685 | 7.83E-55 | -1.69E-46 |
| MS.gene056553 | MS.gene48814 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene48814 | 0.808518 | 2.98E-50 | -1.69E-46 |
| MS.gene057446 | MS.gene48814 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene48814 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene48814 | 0.832234 | 1.06E-55 | -1.69E-46 |
| MS.gene058087 | MS.gene48814 | 0.828211 | 1.02E-54 | -1.69E-46 |
| MS.gene058339 | MS.gene48814 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene48814 | 0.842377 | 2.68E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene48814 | 0.817214 | 3.70E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene48814 | 0.811471 | 6.88E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene48814 | 0.814424 | 1.55E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene48814 | 0.836211 | 1.07E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene48814 | 0.824466 | 7.95E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene48814 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene48814 | 0.828062 | 1.11E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene48814 | 0.811268 | 7.62E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene48814 | -0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene48814 | 0.819049 | 1.42E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene48814 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene48814 | 0.842541 | 2.43E-58 | -1.69E-46 |
| MS.gene060637 | MS.gene48814 | 0.832363 | 9.86E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene48814 | 0.811611 | 6.42E-51 | -1.69E-46 |
| MS.gene060884 | MS.gene48814 | 0.819326 | 1.23E-52 | -1.69E-46 |
| MS.gene060886 | MS.gene48814 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene48814 | 0.807894 | 4.04E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48814.t1 | MTR_4g029090 | 95.878 | 558 | 19 | 3 | 1 | 558 | 1 | 554 | 0.0 | 1070 |
| MS.gene48814.t1 | MTR_7g072550 | 64.921 | 573 | 160 | 14 | 12 | 558 | 13 | 570 | 0.0 | 635 |
| MS.gene48814.t1 | MTR_3g072350 | 37.213 | 610 | 292 | 14 | 1 | 551 | 1 | 578 | 3.81e-81 | 265 |
| MS.gene48814.t1 | MTR_5g083980 | 36.136 | 559 | 288 | 15 | 18 | 551 | 20 | 534 | 1.18e-68 | 231 |
| MS.gene48814.t1 | MTR_3g072350 | 38.160 | 511 | 243 | 12 | 1 | 449 | 1 | 500 | 1.37e-66 | 224 |
| MS.gene48814.t1 | MTR_3g101660 | 30.597 | 402 | 244 | 9 | 98 | 486 | 534 | 913 | 1.86e-33 | 136 |
| MS.gene48814.t1 | MTR_1g019490 | 31.173 | 324 | 205 | 4 | 109 | 427 | 528 | 838 | 4.24e-26 | 114 |
| MS.gene48814.t1 | MTR_8g070840 | 30.479 | 292 | 180 | 4 | 168 | 437 | 284 | 574 | 6.75e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48814.t1 | AT2G38370 | 45.422 | 557 | 235 | 13 | 2 | 544 | 3 | 504 | 9.79e-119 | 361 |
| MS.gene48814.t1 | AT2G38370 | 45.422 | 557 | 235 | 13 | 2 | 544 | 20 | 521 | 2.38e-118 | 360 |
| MS.gene48814.t1 | AT2G40480 | 38.503 | 561 | 249 | 20 | 6 | 551 | 36 | 515 | 1.78e-73 | 243 |
| MS.gene48814.t1 | AT3G51720 | 37.453 | 534 | 176 | 15 | 18 | 544 | 6 | 388 | 6.54e-68 | 225 |
| MS.gene48814.t1 | AT3G56270 | 34.898 | 490 | 221 | 17 | 3 | 476 | 13 | 420 | 9.44e-43 | 159 |
| MS.gene48814.t1 | AT2G26570 | 33.533 | 334 | 206 | 5 | 98 | 427 | 408 | 729 | 1.80e-34 | 139 |
| MS.gene48814.t1 | AT2G26570 | 39.716 | 141 | 63 | 6 | 10 | 138 | 148 | 278 | 2.77e-12 | 70.1 |
| MS.gene48814.t1 | AT2G26570 | 33.533 | 334 | 206 | 5 | 98 | 427 | 408 | 729 | 1.80e-34 | 139 |
| MS.gene48814.t1 | AT2G26570 | 39.716 | 141 | 63 | 6 | 10 | 138 | 148 | 278 | 2.77e-12 | 70.1 |
| MS.gene48814.t1 | AT4G33390 | 35.897 | 273 | 170 | 2 | 168 | 436 | 459 | 730 | 3.34e-27 | 117 |
| MS.gene48814.t1 | AT5G42880 | 30.597 | 268 | 157 | 4 | 168 | 428 | 423 | 668 | 6.12e-21 | 97.4 |
| MS.gene48814.t1 | AT1G45545 | 29.682 | 283 | 182 | 6 | 176 | 443 | 424 | 704 | 8.39e-18 | 87.8 |
| MS.gene48814.t1 | AT1G45545 | 29.682 | 283 | 182 | 6 | 176 | 443 | 425 | 705 | 8.62e-18 | 87.4 |
Find 93 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGAACATTTCAAGAAAA+TGG | 0.171368 | 4.4:+73768070 | MS.gene48814:CDS |
| TGAGGCAAATTTGAACATTA+AGG | 0.232714 | 4.4:+73767656 | MS.gene48814:CDS |
| TCTCGGTTATTCGAAGTAAA+TGG | 0.237011 | 4.4:+73768617 | MS.gene48814:CDS |
| GGTTCGGTGGTGTTGGTTAT+TGG | 0.246121 | 4.4:+73766367 | MS.gene48814:CDS |
| CGAAGCAAATGTATCGAAAA+TGG | 0.273101 | 4.4:+73768391 | MS.gene48814:CDS |
| TCTCTGGCATCATCAGTTTC+CGG | 0.279858 | 4.4:-73768709 | None:intergenic |
| TTGAAGAGGCTTTAAGAAAA+TGG | 0.291438 | 4.4:+73768522 | MS.gene48814:CDS |
| TCCTTCGAACCCGGTTCAAC+CGG | 0.303359 | 4.4:-73766279 | None:intergenic |
| TCTGCTAAGAGAAAGAAATT+TGG | 0.309514 | 4.4:+73768872 | MS.gene48814:CDS |
| AGAGCTTGATGCTGGAAAAT+TGG | 0.325183 | 4.4:+73767500 | MS.gene48814:CDS |
| CTCGGCAAGTGCGGCTGCTT+CGG | 0.333228 | 4.4:-73768216 | None:intergenic |
| AAGAGAAAGAAATTTGGTTT+TGG | 0.353841 | 4.4:+73768878 | MS.gene48814:CDS |
| GAAGGCTCTTGAAGAAGCTT+TGG | 0.361979 | 4.4:+73768463 | MS.gene48814:CDS |
| CCTGCAATTTAAGTCTTGTT+TGG | 0.362896 | 4.4:-73767968 | None:intergenic |
| GGTGGTGAACCCGGTTGAAC+CGG | 0.365920 | 4.4:+73766269 | MS.gene48814:CDS |
| GCAGAATTTGTGTGATGATA+AGG | 0.369186 | 4.4:+73767683 | MS.gene48814:CDS |
| TAAACCTGGACTCGCCGAAT+TGG | 0.386010 | 4.4:-73767760 | None:intergenic |
| GGAGGAACAAGCAGTGGAAT+TGG | 0.401433 | 4.4:+73767521 | MS.gene48814:CDS |
| AGCAGCAACTAATCTAAATT+CGG | 0.412648 | 4.4:-73768165 | None:intergenic |
| CAGCGATATCGTTTGTAGTT+CGG | 0.432690 | 4.4:-73767821 | None:intergenic |
| CCTTCCAATTCGGCGAGTCC+AGG | 0.438140 | 4.4:+73767756 | MS.gene48814:CDS |
| AAAGAAGCTGTTACTCGGTT+CGG | 0.446194 | 4.4:+73766351 | MS.gene48814:CDS |
| GATAGAGTCGGCTTTAGAAC+TGG | 0.446529 | 4.4:-73768668 | None:intergenic |
| GCAGAACATTTCAAGAAAAT+GGG | 0.446538 | 4.4:+73768071 | MS.gene48814:CDS |
| TGCCTATCAAATTCAAAAGA+TGG | 0.449343 | 4.4:-73768818 | None:intergenic |
| CCAAACAAGACTTAAATTGC+AGG | 0.452110 | 4.4:+73767968 | MS.gene48814:CDS |
| CTCGGTTATTCGAAGTAAAT+GGG | 0.458269 | 4.4:+73768618 | MS.gene48814:CDS |
| ACGAAAGAATCTCGATGAAA+AGG | 0.462368 | 4.4:+73768753 | MS.gene48814:CDS |
| AAGAGCTTATCGTTAAAGAA+AGG | 0.463956 | 4.4:+73767547 | MS.gene48814:CDS |
| CATCACCTCAAGTTCAAAGT+TGG | 0.465116 | 4.4:-73768944 | None:intergenic |
| ATCCCACCTTCAAACTTCTC+TGG | 0.472004 | 4.4:-73768725 | None:intergenic |
| GTTACTCGGTTCGGTGGTGT+TGG | 0.473117 | 4.4:+73766360 | MS.gene48814:CDS |
| TTATTATGATGATTAAGAAC+AGG | 0.476495 | 4.4:-73766393 | None:intergenic |
| GAACCGGGTTCGAAGGAGAA+TGG | 0.477509 | 4.4:+73766285 | MS.gene48814:CDS |
| AGAGTAGAGGCTGCAAATAG+AGG | 0.481776 | 4.4:+73768488 | MS.gene48814:CDS |
| AAGTCGTGTTCCTTCCAATT+CGG | 0.489945 | 4.4:+73767746 | MS.gene48814:CDS |
| AGGGAAATTAGTAGTTGAAG+AGG | 0.491762 | 4.4:+73768508 | MS.gene48814:CDS |
| CCCGGTTGAACCGGGTTCGA+AGG | 0.495467 | 4.4:+73766278 | MS.gene48814:CDS |
| GGGTTCACCACCATAGCTTC+AGG | 0.496885 | 4.4:-73766258 | None:intergenic |
| TGTTAACCTCATTATTCCTC+AGG | 0.502587 | 4.4:+73766425 | MS.gene48814:CDS |
| AACACAGAAGAGCTTGATGC+TGG | 0.508566 | 4.4:+73767492 | MS.gene48814:CDS |
| AATTCCCTTAAAATTAAACC+TGG | 0.512515 | 4.4:-73767774 | None:intergenic |
| GAATATCACTCGAGAAAACC+AGG | 0.513568 | 4.4:+73767892 | MS.gene48814:CDS |
| CCTTCGAACCCGGTTCAACC+GGG | 0.516653 | 4.4:-73766278 | None:intergenic |
| ATTCTGAGTTAAACTCTCCC+TGG | 0.516756 | 4.4:-73767910 | None:intergenic |
| AGAGCTTATCGTTAAAGAAA+GGG | 0.516851 | 4.4:+73767548 | MS.gene48814:CDS |
| GGCGATCCGATGGTAACAAA+AGG | 0.520619 | 4.4:+73768543 | MS.gene48814:CDS |
| GCTTCTTTAACAGACTCAAA+TGG | 0.523386 | 4.4:-73766336 | None:intergenic |
| CGCTGATGTTCGAGTTTCTG+TGG | 0.525095 | 4.4:+73767839 | MS.gene48814:CDS |
| AAACCATTCTCCTTCGAACC+CGG | 0.525478 | 4.4:-73766288 | None:intergenic |
| TGGAAGGAACACGACTTCCA+TGG | 0.528830 | 4.4:-73767740 | None:intergenic |
| CTCACTATCGGAGAGGCTCT+CGG | 0.529431 | 4.4:+73768600 | MS.gene48814:CDS |
| GGCAAGTGCGGCTGCTTCGG+CGG | 0.530741 | 4.4:-73768213 | None:intergenic |
| CTGTTAAAGAAGCTGTTACT+CGG | 0.535629 | 4.4:+73766346 | MS.gene48814:CDS |
| TTTCTTGAAATGTTCTGCCT+CGG | 0.538325 | 4.4:-73768066 | None:intergenic |
| CGATAGGTCAAATATTGAGC+CGG | 0.541111 | 4.4:+73768690 | MS.gene48814:CDS |
| AAGAGTTGGAAAGTACCAAA+AGG | 0.544666 | 4.4:+73767589 | MS.gene48814:CDS |
| GCTTGATGCTGGAAAATTGG+AGG | 0.546478 | 4.4:+73767503 | MS.gene48814:CDS |
| AGAAGCCAACTTTGAACTTG+AGG | 0.546691 | 4.4:+73768939 | MS.gene48814:CDS |
| GAGTAGAGGCTGCAAATAGA+GGG | 0.548246 | 4.4:+73768489 | MS.gene48814:CDS |
| TATGGAAATTCCTGAAGCTA+TGG | 0.550003 | 4.4:+73766248 | None:intergenic |
| CCTGGACTCGCCGAATTGGA+AGG | 0.552132 | 4.4:-73767756 | None:intergenic |
| ATGAAAAGGAAAGTGTCGTT+AGG | 0.553678 | 4.4:+73768767 | MS.gene48814:CDS |
| AAAGCGTTATCTTATTATGA+CGG | 0.559732 | 4.4:+73768242 | MS.gene48814:CDS |
| TAGAGCATTATACTCTTCAA+AGG | 0.563624 | 4.4:-73768300 | None:intergenic |
| AGCTCTTTCGTAATATCAGA+AGG | 0.563753 | 4.4:-73768029 | None:intergenic |
| GTGGTGAACCCGGTTGAACC+GGG | 0.565751 | 4.4:+73766270 | MS.gene48814:CDS |
| TAAATACCTGAGGAATAATG+AGG | 0.573109 | 4.4:-73766431 | None:intergenic |
| TGAAGCTATGGTGGTGAACC+CGG | 0.581093 | 4.4:+73766260 | MS.gene48814:CDS |
| AGAAGCTTTGGAAAGAGTAG+AGG | 0.581826 | 4.4:+73768475 | MS.gene48814:CDS |
| GAGCCTCTCCGATAGTGAGA+AGG | 0.587530 | 4.4:-73768596 | None:intergenic |
| GATGAAGAAAAGGAAAACCA+TGG | 0.590053 | 4.4:+73767723 | MS.gene48814:CDS |
| ACAAGCAGAAGAAGAATCTG+AGG | 0.594341 | 4.4:+73767638 | MS.gene48814:CDS |
| AGCCTCTCCGATAGTGAGAA+GGG | 0.595428 | 4.4:-73768595 | None:intergenic |
| ATGCCAGAGAAGTTTGAAGG+TGG | 0.600167 | 4.4:+73768722 | MS.gene48814:CDS |
| ATTTGACCTATCGATAGAGT+CGG | 0.604595 | 4.4:-73768680 | None:intergenic |
| TTAAGAAAATGGCGATCCGA+TGG | 0.604950 | 4.4:+73768533 | MS.gene48814:CDS |
| CTAAAGCCGACTCTATCGAT+AGG | 0.608619 | 4.4:+73768674 | MS.gene48814:CDS |
| AAAATTGGAGGAACAAGCAG+TGG | 0.610904 | 4.4:+73767515 | MS.gene48814:CDS |
| GGAAATTCCTGAAGCTATGG+TGG | 0.613833 | 4.4:+73766251 | MS.gene48814:CDS |
| ATGATGCCAGAGAAGTTTGA+AGG | 0.619171 | 4.4:+73768719 | MS.gene48814:CDS |
| GAAGCTGTTACTCGGTTCGG+TGG | 0.622084 | 4.4:+73766354 | MS.gene48814:CDS |
| GATTGTGTGCAAAAGTGTGA+TGG | 0.628452 | 4.4:+73768266 | MS.gene48814:CDS |
| GTGTCGTTAGGTCAGATGCT+TGG | 0.631037 | 4.4:+73768779 | MS.gene48814:CDS |
| TCTAACATGCAAAGCTCGAG+AGG | 0.633623 | 4.4:+73768319 | MS.gene48814:CDS |
| ACTCAACAAGAAACTTCAGA+AGG | 0.651200 | 4.4:+73767866 | MS.gene48814:CDS |
| GAAGGAGAATGGTTTAAGAG+CGG | 0.656453 | 4.4:+73766296 | MS.gene48814:CDS |
| AACCCTTCTCACTATCGGAG+AGG | 0.666150 | 4.4:+73768593 | MS.gene48814:CDS |
| GCTTCAACGATTGAGTTCCG+AGG | 0.676528 | 4.4:+73768049 | MS.gene48814:CDS |
| AACAAGACTTAAATTGCAGG+TGG | 0.677444 | 4.4:+73767971 | MS.gene48814:CDS |
| AAAGATGCTGAAATCGAATG+TGG | 0.689065 | 4.4:+73767996 | MS.gene48814:CDS |
| AATATCACTCGAGAAAACCA+GGG | 0.694657 | 4.4:+73767893 | MS.gene48814:CDS |
| TGCCAGAGAAGTTTGAAGGT+GGG | 0.696821 | 4.4:+73768723 | MS.gene48814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAATTATTATTATTT+TGG | + | chr4.4:73766530-73766549 | MS.gene48814:intron | 0.0% |
| !!! | ATTTTATTATTATTTTTTAT+AGG | + | chr4.4:73766556-73766575 | MS.gene48814:intron | 0.0% |
| !! | TCATATGAAAATAATATATT+TGG | + | chr4.4:73766726-73766745 | MS.gene48814:intron | 10.0% |
| !!! | TTATTATTATTTTTTATAGG+TGG | + | chr4.4:73766559-73766578 | MS.gene48814:intron | 10.0% |
| !!! | TTGTGTATTTTTTTAATTTT+AGG | + | chr4.4:73766609-73766628 | MS.gene48814:intron | 10.0% |
| !! | TGAAAATAATATATTTGGAT+AGG | + | chr4.4:73766731-73766750 | MS.gene48814:intron | 15.0% |
| !!! | TTTTACATAAATGTAAACTT+TGG | - | chr4.4:73766514-73766533 | None:intergenic | 15.0% |
| !! | AACATAAAAATAAATACCTG+AGG | - | chr4.4:73766444-73766463 | None:intergenic | 20.0% |
| !! | ATACATTCGTTGAAAAAATA+GGG | - | chr4.4:73767150-73767169 | None:intergenic | 20.0% |
| !! | TTATTATGATGATTAAGAAC+AGG | - | chr4.4:73766396-73766415 | None:intergenic | 20.0% |
| !!! | AACCTCTAAGTTTTATATTA+TGG | + | chr4.4:73767279-73767298 | MS.gene48814:intron | 20.0% |
| !!! | ATGAACATAGTTCTAAATTA+TGG | - | chr4.4:73767324-73767343 | None:intergenic | 20.0% |
| !!! | ATTCATATTTTCTAACTAAG+TGG | - | chr4.4:73766952-73766971 | None:intergenic | 20.0% |
| !!! | GAAAATGGATGTTTTAAAAA+GGG | + | chr4.4:73768406-73768425 | MS.gene48814:CDS | 20.0% |
| !!! | TTTTTAATTTTAGGAAGACT+TGG | + | chr4.4:73766618-73766637 | MS.gene48814:intron | 20.0% |
| ! | AAAATACCGATAAATGTGAT+CGG | + | chr4.4:73767230-73767249 | MS.gene48814:intron | 25.0% |
| ! | AAATTAGTTAAAGCGATTTC+TGG | + | chr4.4:73766649-73766668 | MS.gene48814:intron | 25.0% |
| ! | AATATCAAGATTCAAAGCAT+AGG | - | chr4.4:73767205-73767224 | None:intergenic | 25.0% |
| ! | AATTCCCTTAAAATTAAACC+TGG | - | chr4.4:73767777-73767796 | None:intergenic | 25.0% |
| ! | AGCCATAATATAAAACTTAG+AGG | - | chr4.4:73767284-73767303 | None:intergenic | 25.0% |
| ! | CATACATTCGTTGAAAAAAT+AGG | - | chr4.4:73767151-73767170 | None:intergenic | 25.0% |
| ! | GAAAAAAGAAGATGAAGAAA+AGG | + | chr4.4:73767713-73767732 | MS.gene48814:CDS | 25.0% |
| ! | TCATAAGAATCAAAACCTTA+TGG | + | chr4.4:73767340-73767359 | MS.gene48814:intron | 25.0% |
| ! | TGAAATCCAAAAAAACCATA+AGG | - | chr4.4:73767358-73767377 | None:intergenic | 25.0% |
| ! | TTCAAAAATAACTTCACTAG+AGG | + | chr4.4:73767935-73767954 | MS.gene48814:CDS | 25.0% |
| !! | AAAGCGTTATCTTATTATGA+CGG | + | chr4.4:73768242-73768261 | MS.gene48814:CDS | 25.0% |
| !! | ATAAGATAACGCTTTTATCT+CGG | - | chr4.4:73768237-73768256 | None:intergenic | 25.0% |
| !! | ATCCATCTTTTGAATTTGAT+AGG | + | chr4.4:73768816-73768835 | MS.gene48814:CDS | 25.0% |
| !! | TATGATTCATATGATGATGT+TGG | + | chr4.4:73766780-73766799 | MS.gene48814:intron | 25.0% |
| !! | TTTTACCATGATTATTACAG+CGG | + | chr4.4:73767122-73767141 | MS.gene48814:intron | 25.0% |
| !!! | AAGAGAAAGAAATTTGGTTT+TGG | + | chr4.4:73768878-73768897 | MS.gene48814:CDS | 25.0% |
| !!! | CGAAAATGGATGTTTTAAAA+AGG | + | chr4.4:73768405-73768424 | MS.gene48814:CDS | 25.0% |
| !!! | TCAAAACCTTATGGTTTTTT+TGG | + | chr4.4:73767349-73767368 | MS.gene48814:intron | 25.0% |
| !!! | TTGGATTTCATACGTTTTTT+GGG | + | chr4.4:73767368-73767387 | MS.gene48814:intron | 25.0% |
| !!! | TTTGGATTTCATACGTTTTT+TGG | + | chr4.4:73767367-73767386 | MS.gene48814:intron | 25.0% |
| AAGAGCTTATCGTTAAAGAA+AGG | + | chr4.4:73767547-73767566 | MS.gene48814:CDS | 30.0% | |
| AGAGCTTATCGTTAAAGAAA+GGG | + | chr4.4:73767548-73767567 | MS.gene48814:CDS | 30.0% | |
| AGCAGCAACTAATCTAAATT+CGG | - | chr4.4:73768168-73768187 | None:intergenic | 30.0% | |
| GCAGAACATTTCAAGAAAAT+GGG | + | chr4.4:73768071-73768090 | MS.gene48814:CDS | 30.0% | |
| TAAATACCTGAGGAATAATG+AGG | - | chr4.4:73766434-73766453 | None:intergenic | 30.0% | |
| TATGAATTATGAATGCTCTC+TGG | + | chr4.4:73766965-73766984 | MS.gene48814:intron | 30.0% | |
| TCTGCTAAGAGAAAGAAATT+TGG | + | chr4.4:73768872-73768891 | MS.gene48814:CDS | 30.0% | |
| TGAGGCAAATTTGAACATTA+AGG | + | chr4.4:73767656-73767675 | MS.gene48814:CDS | 30.0% | |
| TGCCTATCAAATTCAAAAGA+TGG | - | chr4.4:73768821-73768840 | None:intergenic | 30.0% | |
| TTAAAAACCCTTCTCACTAT+CGG | + | chr4.4:73768588-73768607 | MS.gene48814:CDS | 30.0% | |
| ! | GGAAGTATATTATGGTAATC+CGG | + | chr4.4:73766821-73766840 | MS.gene48814:intron | 30.0% |
| ! | TAGAGCATTATACTCTTCAA+AGG | - | chr4.4:73768303-73768322 | None:intergenic | 30.0% |
| ! | TGCTTTGAATCTTGATATTG+TGG | + | chr4.4:73767206-73767225 | MS.gene48814:intron | 30.0% |
| !! | GAGTCCAGGTTTAATTTTAA+GGG | + | chr4.4:73767770-73767789 | MS.gene48814:CDS | 30.0% |
| !! | TTGAAGAGGCTTTAAGAAAA+TGG | + | chr4.4:73768522-73768541 | MS.gene48814:CDS | 30.0% |
| !!! | TCTCGATGTTTTAAAAGAGT+TGG | + | chr4.4:73767575-73767594 | MS.gene48814:CDS | 30.0% |
| !!! | TGGATTTCATACGTTTTTTG+GGG | + | chr4.4:73767369-73767388 | MS.gene48814:intron | 30.0% |
| AAAAATGAAGGAAGCTGCTA+GGG | + | chr4.4:73768190-73768209 | MS.gene48814:CDS | 35.0% | |
| AAAGATGCTGAAATCGAATG+TGG | + | chr4.4:73767996-73768015 | MS.gene48814:CDS | 35.0% | |
| AACAACCTAGTTGTCAGTTT+GGG | + | chr4.4:73767024-73767043 | MS.gene48814:intron | 35.0% | |
| AACAAGACTTAAATTGCAGG+TGG | + | chr4.4:73767971-73767990 | MS.gene48814:CDS | 35.0% | |
| AATATCACTCGAGAAAACCA+GGG | + | chr4.4:73767893-73767912 | MS.gene48814:CDS | 35.0% | |
| ACGAAAGAATCTCGATGAAA+AGG | + | chr4.4:73768753-73768772 | MS.gene48814:CDS | 35.0% | |
| ACTCAACAAGAAACTTCAGA+AGG | + | chr4.4:73767866-73767885 | MS.gene48814:CDS | 35.0% | |
| AGCTCTTTCGTAATATCAGA+AGG | - | chr4.4:73768032-73768051 | None:intergenic | 35.0% | |
| AGGGAAATTAGTAGTTGAAG+AGG | + | chr4.4:73768508-73768527 | MS.gene48814:CDS | 35.0% | |
| AGGTGGTTGTTTGTGATTTA+GGG | + | chr4.4:73766576-73766595 | MS.gene48814:intron | 35.0% | |
| ATTTGACCTATCGATAGAGT+CGG | - | chr4.4:73768683-73768702 | None:intergenic | 35.0% | |
| CCAAACAAGACTTAAATTGC+AGG | + | chr4.4:73767968-73767987 | MS.gene48814:CDS | 35.0% | |
| CGAAGCAAATGTATCGAAAA+TGG | + | chr4.4:73768391-73768410 | MS.gene48814:CDS | 35.0% | |
| CGAAGTAAAAACAAGCAAGA+AGG | + | chr4.4:73768445-73768464 | MS.gene48814:CDS | 35.0% | |
| CTCGGTTATTCGAAGTAAAT+GGG | + | chr4.4:73768618-73768637 | MS.gene48814:CDS | 35.0% | |
| CTGTTAAAGAAGCTGTTACT+CGG | + | chr4.4:73766346-73766365 | MS.gene48814:CDS | 35.0% | |
| GATGAAGAAAAGGAAAACCA+TGG | + | chr4.4:73767723-73767742 | MS.gene48814:CDS | 35.0% | |
| GCAGAATTTGTGTGATGATA+AGG | + | chr4.4:73767683-73767702 | MS.gene48814:CDS | 35.0% | |
| GCTTCTTTAACAGACTCAAA+TGG | - | chr4.4:73766339-73766358 | None:intergenic | 35.0% | |
| GGCAGAACATTTCAAGAAAA+TGG | + | chr4.4:73768070-73768089 | MS.gene48814:CDS | 35.0% | |
| GTTCCAAATCATTCGTCATT+AGG | + | chr4.4:73766899-73766918 | MS.gene48814:intron | 35.0% | |
| TACCATAATATACTTCCCCT+AGG | - | chr4.4:73766818-73766837 | None:intergenic | 35.0% | |
| TAGGTGGTTGTTTGTGATTT+AGG | + | chr4.4:73766575-73766594 | MS.gene48814:intron | 35.0% | |
| TATTATGGTAATCCGGAGTT+AGG | + | chr4.4:73766828-73766847 | MS.gene48814:intron | 35.0% | |
| TCTCGGTTATTCGAAGTAAA+TGG | + | chr4.4:73768617-73768636 | MS.gene48814:CDS | 35.0% | |
| TGTTAACCTCATTATTCCTC+AGG | + | chr4.4:73766425-73766444 | MS.gene48814:CDS | 35.0% | |
| TTTCTATGTGGAACAACTCT+AGG | - | chr4.4:73766866-73766885 | None:intergenic | 35.0% | |
| TTTCTTGAAATGTTCTGCCT+CGG | - | chr4.4:73768069-73768088 | None:intergenic | 35.0% | |
| ! | CAGATTTTCAACAAGCCTTT+TGG | - | chr4.4:73767607-73767626 | None:intergenic | 35.0% |
| ! | GATTCATATGATGATGTTGG+TGG | + | chr4.4:73766783-73766802 | MS.gene48814:intron | 35.0% |
| ! | TTCCTAGGGGAAGTATATTA+TGG | + | chr4.4:73766813-73766832 | MS.gene48814:intron | 35.0% |
| !! | AAGAGTTGGAAAGTACCAAA+AGG | + | chr4.4:73767589-73767608 | MS.gene48814:CDS | 35.0% |
| !! | ACTCGAGTTCTATTTCTATG+TGG | - | chr4.4:73766878-73766897 | None:intergenic | 35.0% |
| !! | ATGAAAAGGAAAGTGTCGTT+AGG | + | chr4.4:73768767-73768786 | MS.gene48814:CDS | 35.0% |
| !! | ATTTTAGGAAGACTTGGATC+TGG | + | chr4.4:73766624-73766643 | MS.gene48814:intron | 35.0% |
| !! | CCTGCAATTTAAGTCTTGTT+TGG | - | chr4.4:73767971-73767990 | None:intergenic | 35.0% |
| !! | CGAGTCCAGGTTTAATTTTA+AGG | + | chr4.4:73767769-73767788 | MS.gene48814:CDS | 35.0% |
| !! | TTGGTGGTTGTTATTTCCTA+GGG | + | chr4.4:73766799-73766818 | MS.gene48814:intron | 35.0% |
| !!! | GGATTTCATACGTTTTTTGG+GGG | + | chr4.4:73767370-73767389 | MS.gene48814:intron | 35.0% |
| AAAATTGGAGGAACAAGCAG+TGG | + | chr4.4:73767515-73767534 | MS.gene48814:CDS | 40.0% | |
| AAAGAAGCTGTTACTCGGTT+CGG | + | chr4.4:73766351-73766370 | MS.gene48814:CDS | 40.0% | |
| AAGTCGTGTTCCTTCCAATT+CGG | + | chr4.4:73767746-73767765 | MS.gene48814:CDS | 40.0% | |
| ACAAGCAGAAGAAGAATCTG+AGG | + | chr4.4:73767638-73767657 | MS.gene48814:CDS | 40.0% | |
| AGAAGCCAACTTTGAACTTG+AGG | + | chr4.4:73768939-73768958 | MS.gene48814:CDS | 40.0% | |
| AGAGCTTGATGCTGGAAAAT+TGG | + | chr4.4:73767500-73767519 | MS.gene48814:CDS | 40.0% | |
| AGTTGCTGCTCGAAAAATGA+AGG | + | chr4.4:73768178-73768197 | MS.gene48814:CDS | 40.0% | |
| ATGATGCCAGAGAAGTTTGA+AGG | + | chr4.4:73768719-73768738 | MS.gene48814:CDS | 40.0% | |
| ATTCTGAGTTAAACTCTCCC+TGG | - | chr4.4:73767913-73767932 | None:intergenic | 40.0% | |
| CAACAACCTAGTTGTCAGTT+TGG | + | chr4.4:73767023-73767042 | MS.gene48814:intron | 40.0% | |
| CAGAAAACCAAAACTGCAGT+TGG | - | chr4.4:73767257-73767276 | None:intergenic | 40.0% | |
| CAGCGATATCGTTTGTAGTT+CGG | - | chr4.4:73767824-73767843 | None:intergenic | 40.0% | |
| CCAAATCATTCGTCATTAGG+TGG | + | chr4.4:73766902-73766921 | MS.gene48814:intron | 40.0% | |
| CCACCTAATGACGAATGATT+TGG | - | chr4.4:73766905-73766924 | None:intergenic | 40.0% | |
| CGATAGGTCAAATATTGAGC+CGG | + | chr4.4:73768690-73768709 | MS.gene48814:CDS | 40.0% | |
| CTAACTAAGTGGTTAGACTC+AGG | - | chr4.4:73766941-73766960 | None:intergenic | 40.0% | |
| GAAAAATGAAGGAAGCTGCT+AGG | + | chr4.4:73768189-73768208 | MS.gene48814:CDS | 40.0% | |
| GAAGGAGAATGGTTTAAGAG+CGG | + | chr4.4:73766296-73766315 | MS.gene48814:CDS | 40.0% | |
| GAATATCACTCGAGAAAACC+AGG | + | chr4.4:73767892-73767911 | MS.gene48814:CDS | 40.0% | |
| GTTGGACCGATCACATTTAT+CGG | - | chr4.4:73767239-73767258 | None:intergenic | 40.0% | |
| TTAAGAAAATGGCGATCCGA+TGG | + | chr4.4:73768533-73768552 | MS.gene48814:CDS | 40.0% | |
| TTTGGATAGGCAAATGCTTG+TGG | + | chr4.4:73766744-73766763 | MS.gene48814:intron | 40.0% | |
| ! | ATCGAAGGAGTTCTAACTAG+AGG | - | chr4.4:73766992-73767011 | None:intergenic | 40.0% |
| ! | CATAGGTGTGACTGCAATTT+TGG | - | chr4.4:73767188-73767207 | None:intergenic | 40.0% |
| ! | GATTGTGTGCAAAAGTGTGA+TGG | + | chr4.4:73768266-73768285 | MS.gene48814:CDS | 40.0% |
| ! | GTGACTGCAATTTTGGATCA+CGG | - | chr4.4:73767181-73767200 | None:intergenic | 40.0% |
| ! | TGATCGCCTTTTGTTACCAT+CGG | - | chr4.4:73768552-73768571 | None:intergenic | 40.0% |
| !! | AGAAGCTTTGGAAAGAGTAG+AGG | + | chr4.4:73768475-73768494 | MS.gene48814:CDS | 40.0% |
| !! | GTTGGTGGTTGTTATTTCCT+AGG | + | chr4.4:73766798-73766817 | MS.gene48814:intron | 40.0% |
| !! | TGGTGGTTGTTATTTCCTAG+GGG | + | chr4.4:73766800-73766819 | MS.gene48814:intron | 40.0% |
| AAACCATTCTCCTTCGAACC+CGG | - | chr4.4:73766291-73766310 | None:intergenic | 45.0% | |
| AACACAGAAGAGCTTGATGC+TGG | + | chr4.4:73767492-73767511 | MS.gene48814:CDS | 45.0% | |
| ACAACTAGGTTGTTGAGCTG+GGG | - | chr4.4:73767018-73767037 | None:intergenic | 45.0% | |
| ACAACTCTAGGTCAGACTTC+CGG | - | chr4.4:73766854-73766873 | None:intergenic | 45.0% | |
| ACTAAGTGGTTAGACTCAGG+TGG | - | chr4.4:73766938-73766957 | None:intergenic | 45.0% | |
| AGAGTAGAGGCTGCAAATAG+AGG | + | chr4.4:73768488-73768507 | MS.gene48814:CDS | 45.0% | |
| ATCCCACCTTCAAACTTCTC+TGG | - | chr4.4:73768728-73768747 | None:intergenic | 45.0% | |
| ATGCCAGAGAAGTTTGAAGG+TGG | + | chr4.4:73768722-73768741 | MS.gene48814:CDS | 45.0% | |
| GAAGGCTCTTGAAGAAGCTT+TGG | + | chr4.4:73768463-73768482 | MS.gene48814:CDS | 45.0% | |
| GACAACTAGGTTGTTGAGCT+GGG | - | chr4.4:73767019-73767038 | None:intergenic | 45.0% | |
| GAGTAGAGGCTGCAAATAGA+GGG | + | chr4.4:73768489-73768508 | MS.gene48814:CDS | 45.0% | |
| GCTTGATGCTGGAAAATTGG+AGG | + | chr4.4:73767503-73767522 | MS.gene48814:CDS | 45.0% | |
| GGAAATTCCTGAAGCTATGG+TGG | + | chr4.4:73766251-73766270 | MS.gene48814:CDS | 45.0% | |
| TAGGCAAATGCTTGTGGCTT+TGG | + | chr4.4:73766750-73766769 | MS.gene48814:intron | 45.0% | |
| TCTAACATGCAAAGCTCGAG+AGG | + | chr4.4:73768319-73768338 | MS.gene48814:CDS | 45.0% | |
| TCTCTGGCATCATCAGTTTC+CGG | - | chr4.4:73768712-73768731 | None:intergenic | 45.0% | |
| TGACAACTAGGTTGTTGAGC+TGG | - | chr4.4:73767020-73767039 | None:intergenic | 45.0% | |
| TGCCAGAGAAGTTTGAAGGT+GGG | + | chr4.4:73768723-73768742 | MS.gene48814:CDS | 45.0% | |
| TTCGTCCCAAACTGACAACT+AGG | - | chr4.4:73767032-73767051 | None:intergenic | 45.0% | |
| ! | CTAAAGCCGACTCTATCGAT+AGG | + | chr4.4:73768674-73768693 | MS.gene48814:CDS | 45.0% |
| ! | TTGTCAGTTTGGGACGAATG+TGG | + | chr4.4:73767034-73767053 | MS.gene48814:intron | 45.0% |
| !! | GATAGAGTCGGCTTTAGAAC+TGG | - | chr4.4:73768671-73768690 | None:intergenic | 45.0% |
| AACCCTTCTCACTATCGGAG+AGG | + | chr4.4:73768593-73768612 | MS.gene48814:CDS | 50.0% | |
| AGCCTCTCCGATAGTGAGAA+GGG | - | chr4.4:73768598-73768617 | None:intergenic | 50.0% | |
| ATGGTAATCCGGAGTTAGGC+CGG | + | chr4.4:73766832-73766851 | MS.gene48814:intron | 50.0% | |
| GCTTCAACGATTGAGTTCCG+AGG | + | chr4.4:73768049-73768068 | MS.gene48814:CDS | 50.0% | |
| GGAGGAACAAGCAGTGGAAT+TGG | + | chr4.4:73767521-73767540 | MS.gene48814:CDS | 50.0% | |
| GGCGATCCGATGGTAACAAA+AGG | + | chr4.4:73768543-73768562 | MS.gene48814:CDS | 50.0% | |
| GGGAGCCGCTGTAATAATCA+TGG | - | chr4.4:73767130-73767149 | None:intergenic | 50.0% | |
| TAAACCTGGACTCGCCGAAT+TGG | - | chr4.4:73767763-73767782 | None:intergenic | 50.0% | |
| TGGAAGGAACACGACTTCCA+TGG | - | chr4.4:73767743-73767762 | None:intergenic | 50.0% | |
| ! | CGCTGATGTTCGAGTTTCTG+TGG | + | chr4.4:73767839-73767858 | MS.gene48814:CDS | 50.0% |
| ! | CGCTTTTATCTCGGCAAGTG+CGG | - | chr4.4:73768228-73768247 | None:intergenic | 50.0% |
| ! | GATCGGTCCAACTGCAGTTT+TGG | + | chr4.4:73767247-73767266 | MS.gene48814:intron | 50.0% |
| ! | GTGTCGTTAGGTCAGATGCT+TGG | + | chr4.4:73768779-73768798 | MS.gene48814:CDS | 50.0% |
| ! | TGAAGCTATGGTGGTGAACC+CGG | + | chr4.4:73766260-73766279 | MS.gene48814:CDS | 50.0% |
| !! | GGTTCGGTGGTGTTGGTTAT+TGG | + | chr4.4:73766367-73766386 | MS.gene48814:CDS | 50.0% |
| CTCACTATCGGAGAGGCTCT+CGG | + | chr4.4:73768600-73768619 | MS.gene48814:CDS | 55.0% | |
| GAACCGGGTTCGAAGGAGAA+TGG | + | chr4.4:73766285-73766304 | MS.gene48814:CDS | 55.0% | |
| GAGCCTCTCCGATAGTGAGA+AGG | - | chr4.4:73768599-73768618 | None:intergenic | 55.0% | |
| GGGTTCACCACCATAGCTTC+AGG | - | chr4.4:73766261-73766280 | None:intergenic | 55.0% | |
| GTTGAGCTGGGGAACATCGA+AGG | - | chr4.4:73767007-73767026 | None:intergenic | 55.0% | |
| TCAGACTTCCGGCCTAACTC+CGG | - | chr4.4:73766843-73766862 | None:intergenic | 55.0% | |
| TCCTTCGAACCCGGTTCAAC+CGG | - | chr4.4:73766282-73766301 | None:intergenic | 55.0% | |
| !! | GAAGCTGTTACTCGGTTCGG+TGG | + | chr4.4:73766354-73766373 | MS.gene48814:CDS | 55.0% |
| !! | GTTACTCGGTTCGGTGGTGT+TGG | + | chr4.4:73766360-73766379 | MS.gene48814:CDS | 55.0% |
| CCTGGACTCGCCGAATTGGA+AGG | - | chr4.4:73767759-73767778 | None:intergenic | 60.0% | |
| CCTTCCAATTCGGCGAGTCC+AGG | + | chr4.4:73767756-73767775 | MS.gene48814:CDS | 60.0% | |
| CCTTCGAACCCGGTTCAACC+GGG | - | chr4.4:73766281-73766300 | None:intergenic | 60.0% | |
| GGTGGTGAACCCGGTTGAAC+CGG | + | chr4.4:73766269-73766288 | MS.gene48814:CDS | 60.0% | |
| GTGGTGAACCCGGTTGAACC+GGG | + | chr4.4:73766270-73766289 | MS.gene48814:CDS | 60.0% | |
| CCCGGTTGAACCGGGTTCGA+AGG | + | chr4.4:73766278-73766297 | MS.gene48814:CDS | 65.0% | |
| CTCGGCAAGTGCGGCTGCTT+CGG | - | chr4.4:73768219-73768238 | None:intergenic | 65.0% | |
| GGCAAGTGCGGCTGCTTCGG+CGG | - | chr4.4:73768216-73768235 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 73766249 | 73768964 | 73766249 | ID=MS.gene48814 |
| chr4.4 | mRNA | 73766249 | 73768964 | 73766249 | ID=MS.gene48814.t1;Parent=MS.gene48814 |
| chr4.4 | exon | 73766249 | 73766446 | 73766249 | ID=MS.gene48814.t1.exon1;Parent=MS.gene48814.t1 |
| chr4.4 | CDS | 73766249 | 73766446 | 73766249 | ID=cds.MS.gene48814.t1;Parent=MS.gene48814.t1 |
| chr4.4 | exon | 73767486 | 73768964 | 73767486 | ID=MS.gene48814.t1.exon2;Parent=MS.gene48814.t1 |
| chr4.4 | CDS | 73767486 | 73768964 | 73767486 | ID=cds.MS.gene48814.t1;Parent=MS.gene48814.t1 |
| Gene Sequence |
| Protein sequence |
