Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56656.t1 | XP_003607832.1 | 100 | 164 | 0 | 0 | 1 | 164 | 227 | 390 | 7.60E-87 | 329.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56656.t1 | P42698 | 88.0 | 167 | 16 | 1 | 1 | 163 | 221 | 387 | 2.5e-78 | 292.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56656.t1 | G7JHL2 | 100.0 | 164 | 0 | 0 | 1 | 164 | 227 | 390 | 5.5e-87 | 329.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene56656 | -0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene049140 | MS.gene56656 | 0.819002 | 1.46E-52 | -1.69E-46 |
| MS.gene049255 | MS.gene56656 | 0.822651 | 2.11E-53 | -1.69E-46 |
| MS.gene049580 | MS.gene56656 | 0.80196 | 7.03E-49 | -1.69E-46 |
| MS.gene049653 | MS.gene56656 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene049951 | MS.gene56656 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene050277 | MS.gene56656 | 0.852581 | 4.20E-61 | -1.69E-46 |
| MS.gene050320 | MS.gene56656 | 0.808382 | 3.18E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene56656 | 0.808105 | 3.65E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene56656 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene050437 | MS.gene56656 | 0.845242 | 4.59E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene56656 | 0.819789 | 9.66E-53 | -1.69E-46 |
| MS.gene050752 | MS.gene56656 | 0.863207 | 2.94E-64 | -1.69E-46 |
| MS.gene050838 | MS.gene56656 | 0.819171 | 1.34E-52 | -1.69E-46 |
| MS.gene050955 | MS.gene56656 | 0.847421 | 1.17E-59 | -1.69E-46 |
| MS.gene051003 | MS.gene56656 | 0.853441 | 2.39E-61 | -1.69E-46 |
| MS.gene051233 | MS.gene56656 | 0.80611 | 9.65E-50 | -1.69E-46 |
| MS.gene051241 | MS.gene56656 | 0.803504 | 3.38E-49 | -1.69E-46 |
| MS.gene051243 | MS.gene56656 | 0.833461 | 5.26E-56 | -1.69E-46 |
| MS.gene051245 | MS.gene56656 | 0.840918 | 6.51E-58 | -1.69E-46 |
| MS.gene051328 | MS.gene56656 | 0.81871 | 1.70E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene56656 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene05134 | MS.gene56656 | 0.826597 | 2.49E-54 | -1.69E-46 |
| MS.gene051365 | MS.gene56656 | 0.808197 | 3.49E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene56656 | 0.807781 | 4.27E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene56656 | 0.830774 | 2.43E-55 | -1.69E-46 |
| MS.gene052479 | MS.gene56656 | 0.80444 | 2.16E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene56656 | 0.83122 | 1.89E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene56656 | 0.801438 | 9.00E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene56656 | 0.848921 | 4.50E-60 | -1.69E-46 |
| MS.gene053109 | MS.gene56656 | 0.830267 | 3.23E-55 | -1.69E-46 |
| MS.gene053590 | MS.gene56656 | 0.805632 | 1.22E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene56656 | 0.859859 | 3.09E-63 | -1.69E-46 |
| MS.gene055162 | MS.gene56656 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene56656 | 0.807819 | 4.20E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene56656 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene56656 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene56656 | 0.807099 | 5.96E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene56656 | 0.81589 | 7.33E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene56656 | 0.814922 | 1.20E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene56656 | 0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene56656 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene057140 | MS.gene56656 | 0.820597 | 6.31E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene56656 | 0.864126 | 1.52E-64 | -1.69E-46 |
| MS.gene057392 | MS.gene56656 | 0.822904 | 1.85E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene56656 | 0.800135 | 1.66E-48 | -1.69E-46 |
| MS.gene057705 | MS.gene56656 | 0.846501 | 2.09E-59 | -1.69E-46 |
| MS.gene05781 | MS.gene56656 | 0.848678 | 5.26E-60 | -1.69E-46 |
| MS.gene057999 | MS.gene56656 | 0.830595 | 2.69E-55 | -1.69E-46 |
| MS.gene058054 | MS.gene56656 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene56656 | 0.834956 | 2.22E-56 | -1.69E-46 |
| MS.gene058074 | MS.gene56656 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene56656 | 0.849303 | 3.53E-60 | -1.69E-46 |
| MS.gene058906 | MS.gene56656 | 0.814683 | 1.36E-51 | -1.69E-46 |
| MS.gene058976 | MS.gene56656 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene56656 | 0.829672 | 4.51E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene56656 | 0.821594 | 3.72E-53 | -1.69E-46 |
| MS.gene059898 | MS.gene56656 | 0.813801 | 2.13E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene56656 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene06118 | MS.gene56656 | 0.825442 | 4.68E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56656.t1 | MTR_4g083380 | 100.000 | 164 | 0 | 0 | 1 | 164 | 227 | 390 | 1.42e-117 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56656.t1 | AT1G30480 | 88.024 | 167 | 16 | 1 | 1 | 163 | 221 | 387 | 9.32e-103 | 300 |
Find 49 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCGTCAGTGGGAAAATT+TGG | 0.205950 | 4.4:+29427540 | None:intergenic |
| ACCTTGATGGTCGATACTTT+GGG | 0.229758 | 4.4:-29427461 | MS.gene56656:CDS |
| AGGGCAAGGGCTTGGGAAAC+AGG | 0.324519 | 4.4:-29431781 | MS.gene56656:CDS |
| AAAGCGCTTGTTGACCTTGA+TGG | 0.335789 | 4.4:-29427474 | MS.gene56656:CDS |
| TGGAAACAAGGGCAAGGGCT+TGG | 0.353102 | 4.4:-29431789 | MS.gene56656:CDS |
| GGATCAGAATGTGCCAAGTA+TGG | 0.369716 | 4.4:-29427600 | MS.gene56656:CDS |
| TCGGGTTACTGTTCCATACT+TGG | 0.373407 | 4.4:+29427587 | None:intergenic |
| GGAAACAAGGGCAAGGGCTT+GGG | 0.385410 | 4.4:-29431788 | MS.gene56656:CDS |
| GACCTTGATGGTCGATACTT+TGG | 0.416405 | 4.4:-29427462 | MS.gene56656:CDS |
| CTTATCAGACTTACTGTCAC+TGG | 0.458476 | 4.4:+29431692 | None:intergenic |
| TCAGAGGATGATGGCAAAGA+TGG | 0.461946 | 4.4:-29431814 | None:intergenic |
| AGGGATTACAACTCCGTTGA+TGG | 0.463810 | 4.4:-29431754 | MS.gene56656:CDS |
| CCAGGAATTTCTCCTGGCAT+TGG | 0.472680 | 4.4:+29427378 | None:intergenic |
| GTTAAGAGTGTTAACATCAA+TGG | 0.478275 | 4.4:-29431666 | MS.gene56656:CDS |
| AGATGATGAGCTGGAAGATG+AGG | 0.483402 | 4.4:-29427625 | MS.gene56656:CDS |
| CCAATGCCAGGAGAAATTCC+TGG | 0.492382 | 4.4:-29427378 | MS.gene56656:CDS |
| GCAAAGATGGGGTGGAAACA+AGG | 0.492416 | 4.4:-29431801 | MS.gene56656:CDS |
| AAGAAAACCGATAGACGGGC+TGG | 0.499615 | 4.4:-29431729 | MS.gene56656:CDS |
| CTGTTCTTCTAGGTGAAGCC+AGG | 0.500844 | 4.4:+29427360 | None:intergenic |
| ATTCTTACTGCTTCGTCAGT+GGG | 0.509933 | 4.4:+29427531 | None:intergenic |
| CCTTGATGGTCGATACTTTG+GGG | 0.511583 | 4.4:-29427460 | MS.gene56656:CDS |
| GGCGAAGAAAACCGATAGAC+GGG | 0.530747 | 4.4:-29431733 | MS.gene56656:CDS |
| AGAAAACCGATAGACGGGCT+GGG | 0.532383 | 4.4:-29431728 | MS.gene56656:CDS |
| CAGAGGATGATGGCAAAGAT+GGG | 0.541874 | 4.4:-29431813 | None:intergenic |
| GTGAAGCCAGGAATTTCTCC+TGG | 0.553408 | 4.4:+29427372 | None:intergenic |
| AATGAGTTAGCTCCAATGCC+AGG | 0.554584 | 4.4:-29427390 | MS.gene56656:CDS |
| AGCTCATCATCTACCTCACC+AGG | 0.554865 | 4.4:+29427636 | None:intergenic |
| TTATCTCAAATATCAGAACT+CGG | 0.555140 | 4.4:+29427568 | None:intergenic |
| GTTTCTAAGTAGCAGTACTC+TGG | 0.558301 | 4.4:+29431635 | None:intergenic |
| GAAAACCGATAGACGGGCTG+GGG | 0.568144 | 4.4:-29431727 | MS.gene56656:CDS |
| GGGCTTGGGAAACAGGAGCA+AGG | 0.568284 | 4.4:-29431774 | MS.gene56656:CDS |
| TTTGAAGGTGGGGCCTGGTG+AGG | 0.568793 | 4.4:-29427649 | MS.gene56656:intron |
| GATTCTTACTGCTTCGTCAG+TGG | 0.572897 | 4.4:+29427530 | None:intergenic |
| TGGTGAGGTAGATGATGAGC+TGG | 0.574351 | 4.4:-29427634 | MS.gene56656:CDS |
| GGCTTGGGAAACAGGAGCAA+GGG | 0.578046 | 4.4:-29431773 | MS.gene56656:CDS |
| AATAACCCCAGCCCGTCTAT+CGG | 0.581849 | 4.4:+29431722 | None:intergenic |
| CAAAGATGGGGTGGAAACAA+GGG | 0.583228 | 4.4:-29431800 | MS.gene56656:CDS |
| CTTGTCCTCGTCGTAAAATG+TGG | 0.599106 | 4.4:+29427422 | None:intergenic |
| GGATGATGGCAAAGATGGGG+TGG | 0.606439 | 4.4:-29431809 | MS.gene56656:CDS |
| CTAAGTAGCAGTACTCTGGT+AGG | 0.610209 | 4.4:+29431639 | None:intergenic |
| CCCCAAAGTATCGACCATCA+AGG | 0.612071 | 4.4:+29427460 | None:intergenic |
| TATCTCAAATATCAGAACTC+GGG | 0.612442 | 4.4:+29427569 | None:intergenic |
| ATGGGGTGGAAACAAGGGCA+AGG | 0.615661 | 4.4:-29431795 | MS.gene56656:CDS |
| TGGCGAAGAAAACCGATAGA+CGG | 0.618277 | 4.4:-29431734 | MS.gene56656:CDS |
| GATGAGCTGGAAGATGAGGT+AGG | 0.638199 | 4.4:-29427621 | MS.gene56656:CDS |
| TGGGGTGGAAACAAGGGCAA+GGG | 0.650980 | 4.4:-29431794 | MS.gene56656:CDS |
| CTTGATGGTCGATACTTTGG+GGG | 0.673875 | 4.4:-29427459 | MS.gene56656:CDS |
| AGAGGATGATGGCAAAGATG+GGG | 0.674521 | 4.4:-29431812 | None:intergenic |
| AGTACTGCTACTTAGAAACA+TGG | 0.680250 | 4.4:-29431631 | MS.gene56656:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGTTTATAATTATTAATA+TGG | - | chr4.4:29430355-29430374 | MS.gene56656:intron | 10.0% |
| !!! | AATAAATTAAACATCATTTT+AGG | + | chr4.4:29431476-29431495 | None:intergenic | 10.0% |
| !! | TATATATTAGATTAGAAGAA+AGG | - | chr4.4:29428076-29428095 | MS.gene56656:intron | 15.0% |
| !! | TCTCAATAAATTTAAAGAAT+TGG | - | chr4.4:29429889-29429908 | MS.gene56656:intron | 15.0% |
| !! | AAAGAACTGTAATTCTTAAA+AGG | + | chr4.4:29430521-29430540 | None:intergenic | 20.0% |
| !! | ATGACAAAAGATTAACAATA+AGG | + | chr4.4:29431422-29431441 | None:intergenic | 20.0% |
| !! | GAAAGAATGAAAAAGAATTT+CGG | + | chr4.4:29430751-29430770 | None:intergenic | 20.0% |
| !! | TATTTCTTTCTTTCTTTCTT+AGG | + | chr4.4:29431069-29431088 | None:intergenic | 20.0% |
| !! | TTATTATGGAAAGAATTCAA+TGG | + | chr4.4:29429139-29429158 | None:intergenic | 20.0% |
| !! | TTCAATGCCAATAAAAATAA+TGG | + | chr4.4:29430084-29430103 | None:intergenic | 20.0% |
| !! | TTTAATGTTAAATGCTTGTT+TGG | - | chr4.4:29427577-29427596 | MS.gene56656:CDS | 20.0% |
| !!! | AAAGTATTTGGTAGAAATTA+CGG | + | chr4.4:29429399-29429418 | None:intergenic | 20.0% |
| !!! | AATTTTCTGATTATATGACT+TGG | - | chr4.4:29430231-29430250 | MS.gene56656:intron | 20.0% |
| !!! | ACATGTTCCATTATTTTTAT+TGG | - | chr4.4:29430074-29430093 | MS.gene56656:intron | 20.0% |
| !!! | ATTTTATGGTTTAGTTTAGA+AGG | - | chr4.4:29429995-29430014 | MS.gene56656:intron | 20.0% |
| !!! | ATTTTTATTGGCATTGAAAT+TGG | - | chr4.4:29430086-29430105 | MS.gene56656:intron | 20.0% |
| !!! | GAAATTCTTTTTCATTCTTT+CGG | - | chr4.4:29430750-29430769 | MS.gene56656:intron | 20.0% |
| !!! | TATTTCTTACTATGGAATTT+TGG | - | chr4.4:29430456-29430475 | MS.gene56656:intron | 20.0% |
| !!! | TTCCTTTCATAATATTTTGA+AGG | - | chr4.4:29430692-29430711 | MS.gene56656:intron | 20.0% |
| !!! | TTTTAATTTGAAAATAGCAC+AGG | - | chr4.4:29427767-29427786 | MS.gene56656:intron | 20.0% |
| ! | AAAATTGGTTGGAGATTTAT+AGG | + | chr4.4:29429300-29429319 | None:intergenic | 25.0% |
| ! | AATATGGTGTAGTTGTAAAT+CGG | - | chr4.4:29430371-29430390 | MS.gene56656:intron | 25.0% |
| ! | ATATTAGATTAGAAGAAAGG+AGG | - | chr4.4:29428079-29428098 | MS.gene56656:intron | 25.0% |
| ! | ATGATGTTAATACAGTATGA+GGG | - | chr4.4:29430329-29430348 | MS.gene56656:intron | 25.0% |
| ! | ATGTTACAAAGCAATTATGT+TGG | + | chr4.4:29429698-29429717 | None:intergenic | 25.0% |
| ! | CTCCTTCAAAATATTATGAA+AGG | + | chr4.4:29430697-29430716 | None:intergenic | 25.0% |
| ! | GCATTAATAATATGCAAATG+AGG | + | chr4.4:29430922-29430941 | None:intergenic | 25.0% |
| ! | TAAATGTCCATGATAAATAC+TGG | - | chr4.4:29428677-29428696 | MS.gene56656:intron | 25.0% |
| ! | TATAGAAACGTTGAAAGAAA+AGG | - | chr4.4:29428709-29428728 | MS.gene56656:intron | 25.0% |
| ! | TATGATGTTAATACAGTATG+AGG | - | chr4.4:29430328-29430347 | MS.gene56656:intron | 25.0% |
| ! | TCAATGAAAATAAGCTCATT+TGG | + | chr4.4:29430651-29430670 | None:intergenic | 25.0% |
| ! | TCATTCTTTCGGTAATTTAT+GGG | - | chr4.4:29430761-29430780 | MS.gene56656:intron | 25.0% |
| ! | TTAAATCTGATCTATTGCTT+TGG | + | chr4.4:29430963-29430982 | None:intergenic | 25.0% |
| ! | TTATCTCAAATATCAGAACT+CGG | + | chr4.4:29431610-29431629 | None:intergenic | 25.0% |
| ! | TTCATTCTTTCGGTAATTTA+TGG | - | chr4.4:29430760-29430779 | MS.gene56656:intron | 25.0% |
| ! | TTCTAACTCATAAAACAGAA+TGG | + | chr4.4:29427973-29427992 | None:intergenic | 25.0% |
| ! | TTTGCATATTATTAATGCTG+AGG | - | chr4.4:29430924-29430943 | MS.gene56656:intron | 25.0% |
| !! | AAATTTTCTTAGAAAGAGGA+TGG | - | chr4.4:29431027-29431046 | MS.gene56656:intron | 25.0% |
| !! | AATCTCCAACCAATTTTTAA+AGG | - | chr4.4:29429303-29429322 | MS.gene56656:intron | 25.0% |
| !! | AATTTTCTTAGAAAGAGGAT+GGG | - | chr4.4:29431028-29431047 | MS.gene56656:intron | 25.0% |
| !! | ATCTCCAACCAATTTTTAAA+GGG | - | chr4.4:29429304-29429323 | MS.gene56656:intron | 25.0% |
| !! | ATGGTATATTTTCTTTCTTG+GGG | - | chr4.4:29430554-29430573 | MS.gene56656:intron | 25.0% |
| !! | CATGGTATATTTTCTTTCTT+GGG | - | chr4.4:29430553-29430572 | MS.gene56656:intron | 25.0% |
| !! | GAAGAAATTTTCTTAGAAAG+AGG | - | chr4.4:29431023-29431042 | MS.gene56656:intron | 25.0% |
| !! | TACACAGACACATAATTTTA+TGG | - | chr4.4:29429981-29430000 | MS.gene56656:intron | 25.0% |
| !! | TAGACCTTTCAAGAAAATTT+TGG | - | chr4.4:29429457-29429476 | MS.gene56656:intron | 25.0% |
| !! | TTACTATGGAATTTTGGATT+AGG | - | chr4.4:29430462-29430481 | MS.gene56656:intron | 25.0% |
| !!! | ATGCTTGTTTGTTATGAAAA+TGG | + | chr4.4:29430043-29430062 | None:intergenic | 25.0% |
| !!! | TTATTGTTGCTTTGTTTTGA+AGG | - | chr4.4:29431511-29431530 | MS.gene56656:intron | 25.0% |
| !!! | TTTTAGAAGGAAAGATTTCA+GGG | + | chr4.4:29428784-29428803 | None:intergenic | 25.0% |
| !!! | TTTTATGTTTTGTTGGAGAT+TGG | + | chr4.4:29428807-29428826 | None:intergenic | 25.0% |
| AAAATTCCACGTGATATTGA+TGG | + | chr4.4:29429050-29429069 | None:intergenic | 30.0% | |
| AAACAATGTCTAACTAACAG+AGG | + | chr4.4:29428119-29428138 | None:intergenic | 30.0% | |
| AAAGAATTCAATGGAGATTC+AGG | + | chr4.4:29429130-29429149 | None:intergenic | 30.0% | |
| AAAGGTAGTAGTATACAAAG+AGG | - | chr4.4:29428207-29428226 | MS.gene56656:intron | 30.0% | |
| AAGGTAGTAGTATACAAAGA+GGG | - | chr4.4:29428208-29428227 | MS.gene56656:intron | 30.0% | |
| ACTACCTTTACTATTGTGTT+AGG | + | chr4.4:29428196-29428215 | None:intergenic | 30.0% | |
| AGATATTTGTGAGAAGAACA+AGG | + | chr4.4:29429367-29429386 | None:intergenic | 30.0% | |
| AGTTGATCAATGTCAAACAA+AGG | + | chr4.4:29431003-29431022 | None:intergenic | 30.0% | |
| AGTTGTAGTAACAAATGTCA+AGG | - | chr4.4:29428647-29428666 | MS.gene56656:intron | 30.0% | |
| ATAAACGTTCTTAATCACAC+AGG | - | chr4.4:29428301-29428320 | MS.gene56656:intron | 30.0% | |
| ATAATCGATATGACTACATC+CGG | + | chr4.4:29427847-29427866 | None:intergenic | 30.0% | |
| ATATGGTGTAGTTGTAAATC+GGG | - | chr4.4:29430372-29430391 | MS.gene56656:intron | 30.0% | |
| ATCATGTAACGAAACTTGTA+AGG | + | chr4.4:29429858-29429877 | None:intergenic | 30.0% | |
| ATGTTGTATGAACAAATGCT+AGG | - | chr4.4:29428486-29428505 | MS.gene56656:intron | 30.0% | |
| ATTTCTACCAAATACTTTGC+TGG | - | chr4.4:29429401-29429420 | MS.gene56656:intron | 30.0% | |
| CATTCTTTCGGTAATTTATG+GGG | - | chr4.4:29430762-29430781 | MS.gene56656:intron | 30.0% | |
| CCAAGAAAGAAAATATACCA+TGG | + | chr4.4:29430555-29430574 | None:intergenic | 30.0% | |
| CTACCTTTACTATTGTGTTA+GGG | + | chr4.4:29428195-29428214 | None:intergenic | 30.0% | |
| TAAACGTTCTTAATCACACA+GGG | - | chr4.4:29428302-29428321 | MS.gene56656:intron | 30.0% | |
| TATATTCAGAAACACAGTGA+AGG | + | chr4.4:29428034-29428053 | None:intergenic | 30.0% | |
| TATCTCAAATATCAGAACTC+GGG | + | chr4.4:29431609-29431628 | None:intergenic | 30.0% | |
| TCAACCAATAATTACAATGC+AGG | + | chr4.4:29430810-29430829 | None:intergenic | 30.0% | |
| TCATGTAACGAAACTTGTAA+GGG | + | chr4.4:29429857-29429876 | None:intergenic | 30.0% | |
| TGAATATTTGGCATATGATG+TGG | - | chr4.4:29427794-29427813 | MS.gene56656:intron | 30.0% | |
| TGATGTTAATACAGTATGAG+GGG | - | chr4.4:29430330-29430349 | MS.gene56656:intron | 30.0% | |
| TTAAAGAATTGGCCACTTAT+AGG | - | chr4.4:29429900-29429919 | MS.gene56656:intron | 30.0% | |
| TTCAACGTTTCTATATTCTC+TGG | + | chr4.4:29428704-29428723 | None:intergenic | 30.0% | |
| TTCTTTCCATAATAACTAGC+CGG | - | chr4.4:29429144-29429163 | MS.gene56656:intron | 30.0% | |
| TTGTTCTTCTCACAAATATC+TGG | - | chr4.4:29429366-29429385 | MS.gene56656:intron | 30.0% | |
| TTTCTACCAAATACTTTGCT+GGG | - | chr4.4:29429402-29429421 | MS.gene56656:intron | 30.0% | |
| ! | AAAATAAGCTCATTTGGCTT+TGG | + | chr4.4:29430645-29430664 | None:intergenic | 30.0% |
| ! | AACATTCCAATTTTCACGAT+TGG | + | chr4.4:29431169-29431188 | None:intergenic | 30.0% |
| ! | ACCACCAAAATTTTCTTGAA+AGG | + | chr4.4:29429464-29429483 | None:intergenic | 30.0% |
| ! | ACCTTTCAAGAAAATTTTGG+TGG | - | chr4.4:29429460-29429479 | MS.gene56656:intron | 30.0% |
| ! | ATGGTTTAGTTTAGAAGGAA+GGG | - | chr4.4:29430000-29430019 | MS.gene56656:intron | 30.0% |
| ! | ATTTTCTTAGAAAGAGGATG+GGG | - | chr4.4:29431029-29431048 | MS.gene56656:intron | 30.0% |
| ! | CCATGGTATATTTTCTTTCT+TGG | - | chr4.4:29430552-29430571 | MS.gene56656:intron | 30.0% |
| ! | GTTAAATGCTTGTTTGGTTT+CGG | - | chr4.4:29427583-29427602 | MS.gene56656:CDS | 30.0% |
| ! | TATATGACTTGGATGTATCT+TGG | - | chr4.4:29430242-29430261 | MS.gene56656:intron | 30.0% |
| ! | TATGGTTTAGTTTAGAAGGA+AGG | - | chr4.4:29429999-29430018 | MS.gene56656:intron | 30.0% |
| ! | TGGTATATTTTCTTTCTTGG+GGG | - | chr4.4:29430555-29430574 | MS.gene56656:intron | 30.0% |
| ! | TTTTAAACTGTTTAGGCACT+GGG | - | chr4.4:29430866-29430885 | MS.gene56656:intron | 30.0% |
| ! | TTTTTCATTCTTGCAAACAC+AGG | - | chr4.4:29429067-29429086 | MS.gene56656:intron | 30.0% |
| !! | AACACATCACACTTTTTACT+AGG | - | chr4.4:29427932-29427951 | MS.gene56656:intron | 30.0% |
| !! | GTTAAGAGTGTTAACATCAA+TGG | - | chr4.4:29427509-29427528 | MS.gene56656:CDS | 30.0% |
| !! | TGTGGCTTTATTTCTTACTA+TGG | - | chr4.4:29430448-29430467 | MS.gene56656:intron | 30.0% |
| !! | TTCTTTGAGTTGAATATCCA+TGG | - | chr4.4:29430535-29430554 | MS.gene56656:intron | 30.0% |
| !! | TTTGGGGTTTTATGTTTTGT+TGG | + | chr4.4:29428814-29428833 | None:intergenic | 30.0% |
| !!! | GTTTTAGAAGGAAAGATTTC+AGG | + | chr4.4:29428785-29428804 | None:intergenic | 30.0% |
| !!! | TCTAGTCAATTTTGACTTCT+TGG | - | chr4.4:29431216-29431235 | MS.gene56656:intron | 30.0% |
| !!! | TCTGTTTTAGGTTTTTGTCA+GGG | + | chr4.4:29431113-29431132 | None:intergenic | 30.0% |
| !!! | TTCTGTTTTAGGTTTTTGTC+AGG | + | chr4.4:29431114-29431133 | None:intergenic | 30.0% |
| AAACATCACGACTATTGACA+TGG | - | chr4.4:29429923-29429942 | MS.gene56656:intron | 35.0% | |
| AACAAACAAGCATGCATCTA+TGG | - | chr4.4:29430050-29430069 | MS.gene56656:intron | 35.0% | |
| AACAGCTTCCAAATTAAGTG+TGG | + | chr4.4:29428362-29428381 | None:intergenic | 35.0% | |
| AACCTAAAGTTCCAGTATAC+AGG | + | chr4.4:29431332-29431351 | None:intergenic | 35.0% | |
| AAGAACACAGTAATCTCATG+TGG | - | chr4.4:29428419-29428438 | MS.gene56656:intron | 35.0% | |
| AATAAAGCCACAATCTATCC+AGG | + | chr4.4:29430440-29430459 | None:intergenic | 35.0% | |
| AATCCCTGTGAATTACTCTT+GGG | + | chr4.4:29429553-29429572 | None:intergenic | 35.0% | |
| AGAAATCAGAATCCCTCATA+TGG | + | chr4.4:29429625-29429644 | None:intergenic | 35.0% | |
| AGCACAGGCTAATGAATATT+TGG | - | chr4.4:29427782-29427801 | MS.gene56656:intron | 35.0% | |
| AGGTAGTAGTATACAAAGAG+GGG | - | chr4.4:29428209-29428228 | MS.gene56656:intron | 35.0% | |
| ATAAAGCCACAATCTATCCA+GGG | + | chr4.4:29430439-29430458 | None:intergenic | 35.0% | |
| ATACATTCCTTACCTTTGTC+AGG | - | chr4.4:29429251-29429270 | MS.gene56656:intron | 35.0% | |
| ATTGATGGAGGAATATTCGA+GGG | + | chr4.4:29429035-29429054 | None:intergenic | 35.0% | |
| CAAGTTTCGTTACATGATTG+AGG | - | chr4.4:29429860-29429879 | MS.gene56656:intron | 35.0% | |
| CTAGGATTCATTAGCAGATT+GGG | - | chr4.4:29430397-29430416 | MS.gene56656:intron | 35.0% | |
| CTTCCCTAACACAATAGTAA+AGG | - | chr4.4:29428189-29428208 | MS.gene56656:intron | 35.0% | |
| CTTGAAACAAGTGATTCTTG+TGG | + | chr4.4:29429530-29429549 | None:intergenic | 35.0% | |
| CTTTACTATTGTGTTAGGGA+AGG | + | chr4.4:29428191-29428210 | None:intergenic | 35.0% | |
| GAAACGTTGAAAGAAAAGGT+TGG | - | chr4.4:29428713-29428732 | MS.gene56656:intron | 35.0% | |
| GAAATCAGAATCCCTCATAT+GGG | + | chr4.4:29429624-29429643 | None:intergenic | 35.0% | |
| GCTCAATACTAGACATGTAA+TGG | + | chr4.4:29431277-29431296 | None:intergenic | 35.0% | |
| GGTTGGAGATTTATAGGTTT+AGG | + | chr4.4:29429294-29429313 | None:intergenic | 35.0% | |
| TACATTCAGTTGTTCCTTTC+AGG | - | chr4.4:29428749-29428768 | MS.gene56656:intron | 35.0% | |
| TATTGATGGAGGAATATTCG+AGG | + | chr4.4:29429036-29429055 | None:intergenic | 35.0% | |
| TCAATGTCCTGTTCTTAGAA+TGG | - | chr4.4:29430305-29430324 | MS.gene56656:intron | 35.0% | |
| TCTCATGTGGAATATCTTTC+TGG | - | chr4.4:29428432-29428451 | MS.gene56656:intron | 35.0% | |
| TCTTGCAAATGTAACGAGTA+AGG | + | chr4.4:29429330-29429349 | None:intergenic | 35.0% | |
| TGAGATTACTGTGTTCTTTC+TGG | + | chr4.4:29428417-29428436 | None:intergenic | 35.0% | |
| TGTAATTGAGGGATGTTAGT+TGG | - | chr4.4:29428237-29428256 | MS.gene56656:intron | 35.0% | |
| TGTGCCTGCATTGTAATTAT+TGG | - | chr4.4:29430803-29430822 | MS.gene56656:intron | 35.0% | |
| TTACTCGTTACATTTGCAAG+AGG | - | chr4.4:29429329-29429348 | MS.gene56656:intron | 35.0% | |
| ! | AACAGTTTAAAACAGACGCA+AGG | + | chr4.4:29430858-29430877 | None:intergenic | 35.0% |
| ! | AAGGCCCTTTAAAAATTGGT+TGG | + | chr4.4:29429311-29429330 | None:intergenic | 35.0% |
| ! | AGGTTTAGGTTTCCACTAAT+GGG | + | chr4.4:29429280-29429299 | None:intergenic | 35.0% |
| ! | AGTACTGCTACTTAGAAACA+TGG | - | chr4.4:29427544-29427563 | MS.gene56656:CDS | 35.0% |
| ! | CATCATACCATTCTAAGAAC+AGG | + | chr4.4:29430315-29430334 | None:intergenic | 35.0% |
| ! | GAGTAAGGCCCTTTAAAAAT+TGG | + | chr4.4:29429315-29429334 | None:intergenic | 35.0% |
| ! | TAGGTTTAGGTTTCCACTAA+TGG | + | chr4.4:29429281-29429300 | None:intergenic | 35.0% |
| ! | TGTCACAAGACTTCTGTTTT+AGG | + | chr4.4:29431125-29431144 | None:intergenic | 35.0% |
| ! | TTTAAACTGTTTAGGCACTG+GGG | - | chr4.4:29430867-29430886 | MS.gene56656:intron | 35.0% |
| !! | AGCTTATTTTCATTGAGAGC+GGG | - | chr4.4:29430655-29430674 | MS.gene56656:intron | 35.0% |
| !! | GAGCTTATTTTCATTGAGAG+CGG | - | chr4.4:29430654-29430673 | MS.gene56656:intron | 35.0% |
| !! | GCGTCTGTTTTAAACTGTTT+AGG | - | chr4.4:29430859-29430878 | MS.gene56656:intron | 35.0% |
| !! | GTTAGTTGGTCAGTTTGTTT+TGG | - | chr4.4:29428251-29428270 | MS.gene56656:intron | 35.0% |
| !! | GTTTTAAACTGTTTAGGCAC+TGG | - | chr4.4:29430865-29430884 | MS.gene56656:intron | 35.0% |
| !!! | CTCATTGTCTTTTCAAGTGT+TGG | - | chr4.4:29430168-29430187 | MS.gene56656:intron | 35.0% |
| !!! | TGTTGCTTTGTTTTGAAGGT+GGG | - | chr4.4:29431515-29431534 | MS.gene56656:intron | 35.0% |
| !!! | TGTTGGAGATTGGTTTTAGA+AGG | + | chr4.4:29428797-29428816 | None:intergenic | 35.0% |
| !!! | TTCAGCTGCATTGTTTTGAT+GGG | - | chr4.4:29427676-29427695 | MS.gene56656:intron | 35.0% |
| !!! | TTGTTGCTTTGTTTTGAAGG+TGG | - | chr4.4:29431514-29431533 | MS.gene56656:intron | 35.0% |
| !!! | TTTCAGCTGCATTGTTTTGA+TGG | - | chr4.4:29427675-29427694 | MS.gene56656:intron | 35.0% |
| !!! | TTTGTGCTTGTTTTTGTGGT+GGG | + | chr4.4:29429660-29429679 | None:intergenic | 35.0% |
| AAAAGCTTGTGCCTGTATAC+TGG | - | chr4.4:29431318-29431337 | MS.gene56656:intron | 40.0% | |
| AAGAGAAGGGAGAGAAGATT+TGG | + | chr4.4:29428832-29428851 | None:intergenic | 40.0% | |
| AAGCCCAAGAGTAATTCACA+GGG | - | chr4.4:29429547-29429566 | MS.gene56656:intron | 40.0% | |
| AATGCAGGCACAAAGTCAAA+AGG | + | chr4.4:29430795-29430814 | None:intergenic | 40.0% | |
| AGAGAAGGGAGAGAAGATTT+GGG | + | chr4.4:29428831-29428850 | None:intergenic | 40.0% | |
| AGCAATTATGTTGGCCATGA+AGG | + | chr4.4:29429689-29429708 | None:intergenic | 40.0% | |
| AGCTCTCCAATCGTGAAAAT+TGG | - | chr4.4:29431160-29431179 | MS.gene56656:intron | 40.0% | |
| ATATGGATGGCTGACAAAGA+TGG | + | chr4.4:29429741-29429760 | None:intergenic | 40.0% | |
| ATGGCTGACAAAGATGGAAA+GGG | + | chr4.4:29429735-29429754 | None:intergenic | 40.0% | |
| ATTATGTTGGCCATGAAGGT+TGG | + | chr4.4:29429685-29429704 | None:intergenic | 40.0% | |
| ATTCAGAGCAGCACTAATAG+AGG | + | chr4.4:29429597-29429616 | None:intergenic | 40.0% | |
| ATTCCACGTGATATTGATGG+AGG | + | chr4.4:29429047-29429066 | None:intergenic | 40.0% | |
| ATTCCTCCATCAATATCACG+TGG | - | chr4.4:29429041-29429060 | MS.gene56656:intron | 40.0% | |
| ATTCTTACTGCTTCGTCAGT+GGG | + | chr4.4:29431647-29431666 | None:intergenic | 40.0% | |
| ATTGGAGAGCTCTTTACAGA+GGG | + | chr4.4:29431151-29431170 | None:intergenic | 40.0% | |
| CACCAAGTCAAAACATCAGA+AGG | + | chr4.4:29427820-29427839 | None:intergenic | 40.0% | |
| CACCACAAAAACAAGCACAA+AGG | - | chr4.4:29429659-29429678 | MS.gene56656:intron | 40.0% | |
| CAGTTGTTCCTTTCAGGATT+TGG | - | chr4.4:29428755-29428774 | MS.gene56656:intron | 40.0% | |
| CTAGGAAATGAAGTGTGAAC+AGG | - | chr4.4:29428504-29428523 | MS.gene56656:intron | 40.0% | |
| CTCTGGACCAGTATTTATCA+TGG | + | chr4.4:29428687-29428706 | None:intergenic | 40.0% | |
| CTTATCAGACTTACTGTCAC+TGG | + | chr4.4:29427486-29427505 | None:intergenic | 40.0% | |
| CTTGGCTTCCACACTTAATT+TGG | - | chr4.4:29428351-29428370 | MS.gene56656:intron | 40.0% | |
| GAAAAACAGTTGCTCATCCA+CGG | + | chr4.4:29430287-29430306 | None:intergenic | 40.0% | |
| GAAACAAGTGATTCTTGTGG+AGG | + | chr4.4:29429527-29429546 | None:intergenic | 40.0% | |
| GAATATTCGAGGGAAGGATA+AGG | + | chr4.4:29429025-29429044 | None:intergenic | 40.0% | |
| GAATCCCTGTGAATTACTCT+TGG | + | chr4.4:29429554-29429573 | None:intergenic | 40.0% | |
| GAGGAGAAGGGAAAATTTCA+GGG | + | chr4.4:29428949-29428968 | None:intergenic | 40.0% | |
| GATGAGGGATAACTGATGTA+CGG | - | chr4.4:29429209-29429228 | MS.gene56656:intron | 40.0% | |
| GCTAGGATTCATTAGCAGAT+TGG | - | chr4.4:29430396-29430415 | MS.gene56656:intron | 40.0% | |
| GGTAGTAGTATACAAAGAGG+GGG | - | chr4.4:29428210-29428229 | MS.gene56656:intron | 40.0% | |
| GGTTAGAATTCCAACAGGTT+TGG | + | chr4.4:29428870-29428889 | None:intergenic | 40.0% | |
| GTAACGAAACTTGTAAGGGA+AGG | + | chr4.4:29429853-29429872 | None:intergenic | 40.0% | |
| GTAGTAGTATACAAAGAGGG+GGG | - | chr4.4:29428211-29428230 | MS.gene56656:intron | 40.0% | |
| GTATCACTTCATGATGCTGA+CGG | - | chr4.4:29430602-29430621 | MS.gene56656:intron | 40.0% | |
| GTCGTGATGTTTCCTATAAG+TGG | + | chr4.4:29429915-29429934 | None:intergenic | 40.0% | |
| GTTTCTAAGTAGCAGTACTC+TGG | + | chr4.4:29427543-29427562 | None:intergenic | 40.0% | |
| GTTTGTGTCTGTACCTCAAA+GGG | - | chr4.4:29429482-29429501 | MS.gene56656:intron | 40.0% | |
| TAAAGAATCCACACTCACAC+CGG | + | chr4.4:29429166-29429185 | None:intergenic | 40.0% | |
| TAGTAGTATACAAAGAGGGG+GGG | - | chr4.4:29428212-29428231 | MS.gene56656:intron | 40.0% | |
| TCAGAAACACAGTGAAGGAA+TGG | + | chr4.4:29428029-29428048 | None:intergenic | 40.0% | |
| TCCATTCTTCTCTTGTTCAG+AGG | - | chr4.4:29429797-29429816 | MS.gene56656:intron | 40.0% | |
| TCCTCTGAACAAGAGAAGAA+TGG | + | chr4.4:29429801-29429820 | None:intergenic | 40.0% | |
| TCTGAATTCTGCCCATATGA+GGG | - | chr4.4:29429610-29429629 | MS.gene56656:intron | 40.0% | |
| TGAAACTGTTAGAGAAGCTG+TGG | - | chr4.4:29428148-29428167 | MS.gene56656:intron | 40.0% | |
| TGAGGAGAAGGGAAAATTTC+AGG | + | chr4.4:29428950-29428969 | None:intergenic | 40.0% | |
| TGCCTGTATACTGGAACTTT+AGG | - | chr4.4:29431327-29431346 | MS.gene56656:intron | 40.0% | |
| TTCAGAGTGCAGTCAAGTTT+GGG | - | chr4.4:29430490-29430509 | MS.gene56656:intron | 40.0% | |
| TTGGAAATCAGCAATGCCAT+TGG | - | chr4.4:29430187-29430206 | MS.gene56656:intron | 40.0% | |
| TTGTTCAGAGGAGATTCAGA+CGG | - | chr4.4:29429809-29429828 | MS.gene56656:intron | 40.0% | |
| ! | ACATTTGCAAGAGGCTTTGT+TGG | - | chr4.4:29429338-29429357 | MS.gene56656:intron | 40.0% |
| ! | ACCTTGATGGTCGATACTTT+GGG | - | chr4.4:29431714-29431733 | MS.gene56656:CDS | 40.0% |
| ! | GAATGTATTGACAGCAACTG+AGG | + | chr4.4:29429239-29429258 | None:intergenic | 40.0% |
| ! | GAGTTGGTTAGAATTCCAAC+AGG | + | chr4.4:29428875-29428894 | None:intergenic | 40.0% |
| ! | GGTTTAGGTTTCCACTAATG+GGG | + | chr4.4:29429279-29429298 | None:intergenic | 40.0% |
| ! | GTTACACCCAGCAAAGTATT+TGG | + | chr4.4:29429411-29429430 | None:intergenic | 40.0% |
| ! | TGAAGTTAGCTTGAGGAGAA+GGG | + | chr4.4:29428961-29428980 | None:intergenic | 40.0% |
| ! | TTAGGTTTTTGTCAGGGAGA+GGG | + | chr4.4:29431107-29431126 | None:intergenic | 40.0% |
| !! | CATTTGCAAGAGGCTTTGTT+GGG | - | chr4.4:29429339-29429358 | MS.gene56656:intron | 40.0% |
| !! | TTTAGGTTTTTGTCAGGGAG+AGG | + | chr4.4:29431108-29431127 | None:intergenic | 40.0% |
| !!! | AGTTGGTCAGTTTGTTTTGG+TGG | - | chr4.4:29428254-29428273 | MS.gene56656:intron | 40.0% |
| !!! | CTTTGTGCTTGTTTTTGTGG+TGG | + | chr4.4:29429661-29429680 | None:intergenic | 40.0% |
| !!! | GTTGCTTTGTTTTGAAGGTG+GGG | - | chr4.4:29431516-29431535 | MS.gene56656:intron | 40.0% |
| !!! | GTTTTTTGATATGCTGTCCC+TGG | - | chr4.4:29430419-29430438 | MS.gene56656:intron | 40.0% |
| !!! | TGTTTTGACTTGGTGATCAC+CGG | - | chr4.4:29427825-29427844 | MS.gene56656:intron | 40.0% |
| AAGAGAAGAATGGACAGCAG+AGG | + | chr4.4:29429791-29429810 | None:intergenic | 45.0% | |
| AATCAGCAATGCCATTGGTC+TGG | - | chr4.4:29430192-29430211 | MS.gene56656:intron | 45.0% | |
| AATGAGTTAGCTCCAATGCC+AGG | - | chr4.4:29431785-29431804 | MS.gene56656:CDS | 45.0% | |
| ACTCATGTTCCTCTTGGATG+AGG | - | chr4.4:29429193-29429212 | MS.gene56656:intron | 45.0% | |
| AGAAATTCCTGGCTTCACCT+AGG | - | chr4.4:29431808-29431827 | MS.gene56656:CDS | 45.0% | |
| AGAAGAAAGGAGGTCCAAGT+GGG | - | chr4.4:29428089-29428108 | MS.gene56656:intron | 45.0% | |
| AGAATTCCAACAGGTTTGGC+AGG | + | chr4.4:29428866-29428885 | None:intergenic | 45.0% | |
| AGATGATGAGCTGGAAGATG+AGG | - | chr4.4:29431550-29431569 | MS.gene56656:intron | 45.0% | |
| AGGGATTACAACTCCGTTGA+TGG | - | chr4.4:29427421-29427440 | MS.gene56656:CDS | 45.0% | |
| ATCCAAGAGGAACATGAGTC+TGG | + | chr4.4:29429192-29429211 | None:intergenic | 45.0% | |
| ATGGAGGAATATTCGAGGGA+AGG | + | chr4.4:29429031-29429050 | None:intergenic | 45.0% | |
| ATTCTCAGGGGAGATGCATA+TGG | + | chr4.4:29429758-29429777 | None:intergenic | 45.0% | |
| CAAAGATGGGGTGGAAACAA+GGG | - | chr4.4:29427375-29427394 | MS.gene56656:CDS | 45.0% | |
| CAAGCCCAAGAGTAATTCAC+AGG | - | chr4.4:29429546-29429565 | MS.gene56656:intron | 45.0% | |
| CTAAGTAGCAGTACTCTGGT+AGG | + | chr4.4:29427539-29427558 | None:intergenic | 45.0% | |
| CTAGTCAGCATGGATAGAGT+TGG | + | chr4.4:29428891-29428910 | None:intergenic | 45.0% | |
| CTCATGTTCCTCTTGGATGA+GGG | - | chr4.4:29429194-29429213 | MS.gene56656:intron | 45.0% | |
| CTCTGAATTCTGCCCATATG+AGG | - | chr4.4:29429609-29429628 | MS.gene56656:intron | 45.0% | |
| CTTCAGAGTGCAGTCAAGTT+TGG | - | chr4.4:29430489-29430508 | MS.gene56656:intron | 45.0% | |
| CTTCTCCTCAAGCTAACTTC+AGG | - | chr4.4:29428960-29428979 | MS.gene56656:intron | 45.0% | |
| CTTGTCCTCGTCGTAAAATG+TGG | + | chr4.4:29431756-29431775 | None:intergenic | 45.0% | |
| GAATTCCAACAGGTTTGGCA+GGG | + | chr4.4:29428865-29428884 | None:intergenic | 45.0% | |
| GAGAAGGGAAAATTTCAGGG+TGG | + | chr4.4:29428946-29428965 | None:intergenic | 45.0% | |
| GAGAAGGGAGAGAAGATTTG+GGG | + | chr4.4:29428830-29428849 | None:intergenic | 45.0% | |
| GAGAGATTGCTGCATGACAA+TGG | + | chr4.4:29429001-29429020 | None:intergenic | 45.0% | |
| GATGGCTGACAAAGATGGAA+AGG | + | chr4.4:29429736-29429755 | None:intergenic | 45.0% | |
| GATTCTTACTGCTTCGTCAG+TGG | + | chr4.4:29431648-29431667 | None:intergenic | 45.0% | |
| GATTGGAGAGCTCTTTACAG+AGG | + | chr4.4:29431152-29431171 | None:intergenic | 45.0% | |
| GCTTCGTCAGTGGGAAAATT+TGG | + | chr4.4:29431638-29431657 | None:intergenic | 45.0% | |
| GGATCAGAATGTGCCAAGTA+TGG | - | chr4.4:29431575-29431594 | MS.gene56656:intron | 45.0% | |
| GGTTTGTGTCTGTACCTCAA+AGG | - | chr4.4:29429481-29429500 | MS.gene56656:intron | 45.0% | |
| GTAGTTGTAAATCGGGAGCT+AGG | - | chr4.4:29430379-29430398 | MS.gene56656:intron | 45.0% | |
| TAGAAGAAAGGAGGTCCAAG+TGG | - | chr4.4:29428088-29428107 | MS.gene56656:intron | 45.0% | |
| TCAGTTATCCCTCATCCAAG+AGG | + | chr4.4:29429205-29429224 | None:intergenic | 45.0% | |
| TCCAAGAGGAACATGAGTCT+GGG | + | chr4.4:29429191-29429210 | None:intergenic | 45.0% | |
| TCGGGTTACTGTTCCATACT+TGG | + | chr4.4:29431591-29431610 | None:intergenic | 45.0% | |
| TCTTAGAAAGAGGATGGGGA+AGG | - | chr4.4:29431033-29431052 | MS.gene56656:intron | 45.0% | |
| TCTTCTCTCCCTTCTCTTTG+TGG | - | chr4.4:29428834-29428853 | MS.gene56656:intron | 45.0% | |
| TGAAAGGAAACTCAACTCCC+AGG | + | chr4.4:29430681-29430700 | None:intergenic | 45.0% | |
| TGCTACATACACCAGACCAA+TGG | + | chr4.4:29430206-29430225 | None:intergenic | 45.0% | |
| TGCTGCATGACAATGGATGA+AGG | + | chr4.4:29428994-29429013 | None:intergenic | 45.0% | |
| TGGCGAAGAAAACCGATAGA+CGG | - | chr4.4:29427441-29427460 | MS.gene56656:CDS | 45.0% | |
| TTCACAGGGATTCTGCATCA+TGG | - | chr4.4:29429561-29429580 | MS.gene56656:intron | 45.0% | |
| TTGGTCTGGTGTATGTAGCA+TGG | - | chr4.4:29430206-29430225 | MS.gene56656:intron | 45.0% | |
| TTTGTCAGGTACCCCATTAG+TGG | - | chr4.4:29429265-29429284 | MS.gene56656:intron | 45.0% | |
| ! | AAAGCGCTTGTTGACCTTGA+TGG | - | chr4.4:29431701-29431720 | MS.gene56656:CDS | 45.0% |
| ! | ACTAATGGGGTACCTGACAA+AGG | + | chr4.4:29429266-29429285 | None:intergenic | 45.0% |
| ! | ACTCTCCTGAAGTTAGCTTG+AGG | + | chr4.4:29428968-29428987 | None:intergenic | 45.0% |
| ! | CCTTGATGGTCGATACTTTG+GGG | - | chr4.4:29431715-29431734 | MS.gene56656:CDS | 45.0% |
| ! | CTCACACCGGCTAGTTATTA+TGG | + | chr4.4:29429153-29429172 | None:intergenic | 45.0% |
| ! | CTGAAGTTAGCTTGAGGAGA+AGG | + | chr4.4:29428962-29428981 | None:intergenic | 45.0% |
| ! | CTTGATGGTCGATACTTTGG+GGG | - | chr4.4:29431716-29431735 | MS.gene56656:CDS | 45.0% |
| ! | GACCTTGATGGTCGATACTT+TGG | - | chr4.4:29431713-29431732 | MS.gene56656:CDS | 45.0% |
| ! | GGAGGAGTAAAAGAGTATGC+TGG | + | chr4.4:29429509-29429528 | None:intergenic | 45.0% |
| ! | TAGGTTTTTGTCAGGGAGAG+GGG | + | chr4.4:29431106-29431125 | None:intergenic | 45.0% |
| ! | TCGGTTTTCTTCGCCATCAA+CGG | + | chr4.4:29427437-29427456 | None:intergenic | 45.0% |
| ! | TGGAAGCCAAGTTGAGCAAT+GGG | + | chr4.4:29428342-29428361 | None:intergenic | 45.0% |
| !! | TTTCAGGGTGGAGTATTGTC+AGG | + | chr4.4:29428934-29428953 | None:intergenic | 45.0% |
| !!! | GGCCTTCTGATGTTTTGACT+TGG | - | chr4.4:29427815-29427834 | MS.gene56656:intron | 45.0% |
| !!! | GGCCTTTGTGCTTGTTTTTG+TGG | + | chr4.4:29429664-29429683 | None:intergenic | 45.0% |
| AAACAGTTGCTCATCCACGG+AGG | + | chr4.4:29430284-29430303 | None:intergenic | 50.0% | |
| AACAGTTGCTCATCCACGGA+GGG | + | chr4.4:29430283-29430302 | None:intergenic | 50.0% | |
| AAGAAAACCGATAGACGGGC+TGG | - | chr4.4:29427446-29427465 | MS.gene56656:CDS | 50.0% | |
| AATAACCCCAGCCCGTCTAT+CGG | + | chr4.4:29427456-29427475 | None:intergenic | 50.0% | |
| ACAGCTCCCATTGCTCAACT+TGG | - | chr4.4:29428333-29428352 | MS.gene56656:intron | 50.0% | |
| ACAGGGATTCTGCATCATGG+AGG | - | chr4.4:29429564-29429583 | MS.gene56656:intron | 50.0% | |
| ACTGTTAGAGAAGCTGTGGC+CGG | - | chr4.4:29428152-29428171 | MS.gene56656:intron | 50.0% | |
| AGAATGGACAGCAGAGGCAA+AGG | + | chr4.4:29429785-29429804 | None:intergenic | 50.0% | |
| AGAGGGGGGGAATGTAATTG+AGG | - | chr4.4:29428225-29428244 | MS.gene56656:intron | 50.0% | |
| AGAGTATGCTGGTCCCTTTG+AGG | + | chr4.4:29429498-29429517 | None:intergenic | 50.0% | |
| AGCACAAAGGCCAACCTTCA+TGG | - | chr4.4:29429672-29429691 | MS.gene56656:intron | 50.0% | |
| AGCTCATCATCTACCTCACC+AGG | + | chr4.4:29431542-29431561 | None:intergenic | 50.0% | |
| AGGCAAAGGCCTCATTCTCA+GGG | + | chr4.4:29429771-29429790 | None:intergenic | 50.0% | |
| AGGGATAGGCCACAAAGAGA+AGG | + | chr4.4:29428846-29428865 | None:intergenic | 50.0% | |
| ATAACTAGCCGGTGTGAGTG+TGG | - | chr4.4:29429155-29429174 | MS.gene56656:intron | 50.0% | |
| ATGCATCTCCCCTGAGAATG+AGG | - | chr4.4:29429759-29429778 | MS.gene56656:intron | 50.0% | |
| CAGGGTCTCCAAATCCTGAA+AGG | + | chr4.4:29428766-29428785 | None:intergenic | 50.0% | |
| CCAATGCCAGGAGAAATTCC+TGG | - | chr4.4:29431797-29431816 | MS.gene56656:CDS | 50.0% | |
| CCAGGAATTTCTCCTGGCAT+TGG | + | chr4.4:29431800-29431819 | None:intergenic | 50.0% | |
| GACTAGCAAACCAGCTCGTT+GGG | - | chr4.4:29428905-29428924 | MS.gene56656:intron | 50.0% | |
| GAGGGGGGGAATGTAATTGA+GGG | - | chr4.4:29428226-29428245 | MS.gene56656:intron | 50.0% | |
| GATGAGCTGGAAGATGAGGT+AGG | - | chr4.4:29431554-29431573 | MS.gene56656:intron | 50.0% | |
| GCAAAGATGGGGTGGAAACA+AGG | - | chr4.4:29427374-29427393 | MS.gene56656:CDS | 50.0% | |
| GGCGAAGAAAACCGATAGAC+GGG | - | chr4.4:29427442-29427461 | MS.gene56656:CDS | 50.0% | |
| GGGATAGGCCACAAAGAGAA+GGG | + | chr4.4:29428845-29428864 | None:intergenic | 50.0% | |
| GTGAAGCCAGGAATTTCTCC+TGG | + | chr4.4:29431806-29431825 | None:intergenic | 50.0% | |
| TCAGGGGAGATGCATATGGA+TGG | + | chr4.4:29429754-29429773 | None:intergenic | 50.0% | |
| TCCCAGACTCATGTTCCTCT+TGG | - | chr4.4:29429187-29429206 | MS.gene56656:intron | 50.0% | |
| TGACTAGCAAACCAGCTCGT+TGG | - | chr4.4:29428904-29428923 | MS.gene56656:intron | 50.0% | |
| TGCTGTCCCTGGATAGATTG+TGG | - | chr4.4:29430430-29430449 | MS.gene56656:intron | 50.0% | |
| TGGTGAGGTAGATGATGAGC+TGG | - | chr4.4:29431541-29431560 | MS.gene56656:intron | 50.0% | |
| ! | AGAAAACCGATAGACGGGCT+GGG | - | chr4.4:29427447-29427466 | MS.gene56656:CDS | 50.0% |
| ! | AGGTTTTTGTCAGGGAGAGG+GGG | + | chr4.4:29431105-29431124 | None:intergenic | 50.0% |
| ! | ATTTTCATTGAGAGCGGGCC+TGG | - | chr4.4:29430660-29430679 | MS.gene56656:intron | 50.0% |
| ! | GTGGAAGCCAAGTTGAGCAA+TGG | + | chr4.4:29428343-29428362 | None:intergenic | 50.0% |
| ! | TGCTTGTTAACGACGCTGAG+AGG | - | chr4.4:29427614-29427633 | MS.gene56656:CDS | 50.0% |
| ! | TGGGGTACCTGACAAAGGTA+AGG | + | chr4.4:29429261-29429280 | None:intergenic | 50.0% |
| ! | TTTTCATTGAGAGCGGGCCT+GGG | - | chr4.4:29430661-29430680 | MS.gene56656:intron | 50.0% |
| !! | AAACTGTTTAGGCACTGGGG+TGG | - | chr4.4:29430870-29430889 | MS.gene56656:intron | 50.0% |
| !! | AGCTGGTTTGCTAGTCAGCA+TGG | + | chr4.4:29428901-29428920 | None:intergenic | 50.0% |
| !! | CCCCAAAGTATCGACCATCA+AGG | + | chr4.4:29431718-29431737 | None:intergenic | 50.0% |
| !!! | TTTGTTTTGAAGGTGGGGCC+TGG | - | chr4.4:29431521-29431540 | MS.gene56656:intron | 50.0% |
| ATGGGGTGGAAACAAGGGCA+AGG | - | chr4.4:29427380-29427399 | MS.gene56656:CDS | 55.0% | |
| CCAACAGGTTTGGCAGGGAT+AGG | + | chr4.4:29428860-29428879 | None:intergenic | 55.0% | |
| CCTATCCCTGCCAAACCTGT+TGG | - | chr4.4:29428857-29428876 | MS.gene56656:intron | 55.0% | |
| GAGGCAAAGGCCTCATTCTC+AGG | + | chr4.4:29429772-29429791 | None:intergenic | 55.0% | |
| GGAAACAAGGGCAAGGGCTT+GGG | - | chr4.4:29427387-29427406 | MS.gene56656:CDS | 55.0% | |
| GGAAGGCTAACGAACACGTC+CGG | + | chr4.4:29428174-29428193 | None:intergenic | 55.0% | |
| GGCAAAGGCCTCATTCTCAG+GGG | + | chr4.4:29429770-29429789 | None:intergenic | 55.0% | |
| GGCTTGGGAAACAGGAGCAA+GGG | - | chr4.4:29427402-29427421 | MS.gene56656:CDS | 55.0% | |
| GGGATTCTGCATCATGGAGG+AGG | - | chr4.4:29429567-29429586 | MS.gene56656:intron | 55.0% | |
| TGGAAACAAGGGCAAGGGCT+TGG | - | chr4.4:29427386-29427405 | MS.gene56656:CDS | 55.0% | |
| TGGGGTGGAAACAAGGGCAA+GGG | - | chr4.4:29427381-29427400 | MS.gene56656:CDS | 55.0% | |
| ! | GCGTGCCACATTTTACGACG+AGG | - | chr4.4:29431748-29431767 | MS.gene56656:CDS | 55.0% |
| ! | TTTTTGTCAGGGAGAGGGGG+TGG | + | chr4.4:29431102-29431121 | None:intergenic | 55.0% |
| !! | GAAAACCGATAGACGGGCTG+GGG | - | chr4.4:29427448-29427467 | MS.gene56656:CDS | 55.0% |
| !! | GATCACTTTTCCTCCCTCCG+TGG | - | chr4.4:29430267-29430286 | MS.gene56656:intron | 55.0% |
| AGGGCAAGGGCTTGGGAAAC+AGG | - | chr4.4:29427394-29427413 | MS.gene56656:CDS | 60.0% | |
| AGTTGCTCATCCACGGAGGG+AGG | + | chr4.4:29430280-29430299 | None:intergenic | 60.0% | |
| CTAACAGAGGCCAGCCCACT+TGG | + | chr4.4:29428106-29428125 | None:intergenic | 60.0% | |
| GAAAGGAGGTCCAAGTGGGC+TGG | - | chr4.4:29428093-29428112 | MS.gene56656:intron | 60.0% | |
| GGGCTTGGGAAACAGGAGCA+AGG | - | chr4.4:29427401-29427420 | MS.gene56656:CDS | 60.0% | |
| TGTCAGGACACCCAACGAGC+TGG | + | chr4.4:29428918-29428937 | None:intergenic | 60.0% | |
| TTTGAAGGTGGGGCCTGGTG+AGG | - | chr4.4:29431526-29431545 | MS.gene56656:intron | 60.0% | |
| TTGTCAGGGAGAGGGGGTGG+AGG | + | chr4.4:29431099-29431118 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 29427368 | 29431829 | 29427368 | ID=MS.gene56656 |
| chr4.4 | mRNA | 29427368 | 29431829 | 29427368 | ID=MS.gene56656.t1;Parent=MS.gene56656 |
| chr4.4 | exon | 29431632 | 29431829 | 29431632 | ID=MS.gene56656.t1.exon1;Parent=MS.gene56656.t1 |
| chr4.4 | CDS | 29431632 | 29431829 | 29431632 | ID=cds.MS.gene56656.t1;Parent=MS.gene56656.t1 |
| chr4.4 | exon | 29427368 | 29427664 | 29427368 | ID=MS.gene56656.t1.exon2;Parent=MS.gene56656.t1 |
| chr4.4 | CDS | 29427368 | 29427664 | 29427368 | ID=cds.MS.gene56656.t1;Parent=MS.gene56656.t1 |
| Gene Sequence |
| Protein sequence |
