Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62835.t1 | XP_003608809.2 | 96.9 | 225 | 7 | 0 | 1 | 225 | 45 | 269 | 1.40E-118 | 435.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62835.t1 | G7JLB7 | 96.9 | 225 | 7 | 0 | 1 | 225 | 1 | 225 | 9.8e-119 | 435.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene62835 | -0.82276 | 1.99E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene62835 | 0.837039 | 6.58E-57 | -1.69E-46 |
| MS.gene049865 | MS.gene62835 | -0.80622 | 9.15E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene62835 | -0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene050363 | MS.gene62835 | 0.817657 | 2.94E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene62835 | 0.829584 | 4.74E-55 | -1.69E-46 |
| MS.gene050463 | MS.gene62835 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene62835 | -0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene62835 | -0.812346 | 4.44E-51 | -1.69E-46 |
| MS.gene050528 | MS.gene62835 | 0.816478 | 5.42E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene62835 | -0.828176 | 1.04E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene62835 | -0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene62835 | -0.805898 | 1.07E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene62835 | -0.811106 | 8.26E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene62835 | -0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene62835 | 0.834246 | 3.35E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene62835 | 0.806379 | 8.47E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene62835 | 0.875127 | 3.94E-68 | -1.69E-46 |
| MS.gene052164 | MS.gene62835 | -0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene05234 | MS.gene62835 | 0.812708 | 3.70E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene62835 | -0.831177 | 1.94E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene62835 | -0.841702 | 4.05E-58 | -1.69E-46 |
| MS.gene053083 | MS.gene62835 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene62835 | -0.816394 | 5.66E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene62835 | 0.824101 | 9.69E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene62835 | 0.868989 | 4.33E-66 | -1.69E-46 |
| MS.gene053826 | MS.gene62835 | 0.819517 | 1.11E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene62835 | -0.818445 | 1.95E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene62835 | -0.810156 | 1.33E-50 | -1.69E-46 |
| MS.gene054959 | MS.gene62835 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene62835 | -0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene62835 | -0.81221 | 4.76E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene62835 | -0.808973 | 2.38E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene62835 | -0.830963 | 2.18E-55 | -1.69E-46 |
| MS.gene056310 | MS.gene62835 | 0.850608 | 1.52E-60 | -1.69E-46 |
| MS.gene056311 | MS.gene62835 | 0.855695 | 5.31E-62 | -1.69E-46 |
| MS.gene056313 | MS.gene62835 | 0.807886 | 4.06E-50 | -1.69E-46 |
| MS.gene056408 | MS.gene62835 | 0.830314 | 3.15E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene62835 | -0.830564 | 2.74E-55 | -1.69E-46 |
| MS.gene057014 | MS.gene62835 | 0.885875 | 5.57E-72 | -1.69E-46 |
| MS.gene05726 | MS.gene62835 | 0.830658 | 2.59E-55 | -1.69E-46 |
| MS.gene057499 | MS.gene62835 | 0.803085 | 4.12E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene62835 | -0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene62835 | -0.805245 | 1.46E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene62835 | -0.830451 | 2.92E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene62835 | -0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene058493 | MS.gene62835 | 0.82194 | 3.09E-53 | -1.69E-46 |
| MS.gene058494 | MS.gene62835 | 0.830149 | 3.46E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene62835 | -0.801221 | 9.97E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene62835 | -0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene62835 | -0.831461 | 1.65E-55 | -1.69E-46 |
| MS.gene059223 | MS.gene62835 | 0.84168 | 4.10E-58 | -1.69E-46 |
| MS.gene059236 | MS.gene62835 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene62835 | -0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene62835 | -0.834178 | 3.48E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene62835 | -0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene62835 | -0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene060187 | MS.gene62835 | 0.848215 | 7.06E-60 | -1.69E-46 |
| MS.gene060593 | MS.gene62835 | 0.821076 | 4.89E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene62835 | 0.862536 | 4.73E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene62835 | -0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene62835 | -0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene62835 | -0.864536 | 1.13E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene62835 | -0.813907 | 2.02E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62835.t1 | MTR_4g102220 | 96.889 | 225 | 7 | 0 | 1 | 225 | 1 | 225 | 9.53e-160 | 441 |
| MS.gene62835.t1 | MTR_5g011800 | 59.574 | 235 | 79 | 6 | 1 | 225 | 1 | 229 | 2.59e-86 | 255 |
| MS.gene62835.t1 | MTR_5g011820 | 57.021 | 235 | 85 | 7 | 1 | 225 | 4 | 232 | 2.77e-81 | 243 |
| MS.gene62835.t1 | MTR_4g024370 | 52.521 | 238 | 92 | 8 | 1 | 224 | 1 | 231 | 3.02e-72 | 219 |
| MS.gene62835.t1 | MTR_4g024370 | 52.521 | 238 | 92 | 8 | 1 | 224 | 1 | 231 | 3.02e-72 | 219 |
| MS.gene62835.t1 | MTR_4g023950 | 32.143 | 224 | 128 | 8 | 5 | 224 | 4 | 207 | 3.96e-23 | 93.2 |
| MS.gene62835.t1 | MTR_1g076800 | 31.556 | 225 | 132 | 7 | 5 | 224 | 4 | 211 | 9.67e-23 | 92.4 |
| MS.gene62835.t1 | MTR_6g060390 | 30.837 | 227 | 132 | 10 | 5 | 224 | 4 | 212 | 1.11e-22 | 92.0 |
| MS.gene62835.t1 | MTR_6g060440 | 28.444 | 225 | 138 | 7 | 5 | 224 | 4 | 210 | 2.21e-22 | 91.3 |
| MS.gene62835.t1 | MTR_7g117380 | 31.466 | 232 | 134 | 11 | 5 | 224 | 3 | 221 | 4.45e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62835.t1 | AT2G45360 | 54.867 | 226 | 90 | 4 | 1 | 225 | 1 | 215 | 6.92e-72 | 218 |
| MS.gene62835.t1 | AT3G60780 | 51.316 | 228 | 98 | 5 | 1 | 225 | 1 | 218 | 4.50e-69 | 211 |
| MS.gene62835.t1 | AT1G62840 | 49.569 | 232 | 102 | 5 | 1 | 225 | 1 | 224 | 1.00e-60 | 190 |
| MS.gene62835.t1 | AT1G12320 | 47.788 | 226 | 99 | 5 | 1 | 223 | 1 | 210 | 1.50e-51 | 166 |
| MS.gene62835.t1 | AT5G62280 | 29.487 | 234 | 138 | 10 | 5 | 224 | 4 | 224 | 4.10e-16 | 75.1 |
Find 44 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAGATTGTGAGGGAATTA+AGG | 0.232972 | 8.1:+21385975 | MS.gene62835:CDS |
| TAAGGTCACGTCGTGTTGTT+AGG | 0.340628 | 8.1:+21386121 | MS.gene62835:CDS |
| TAGCACATGTTTCAGCTGTT+GGG | 0.366973 | 8.1:+21386178 | MS.gene62835:CDS |
| GGTGGCTAAGTTAAGTGTTA+AGG | 0.386848 | 8.1:+21386017 | MS.gene62835:CDS |
| TTGTTGAGGAAGGAGGATTA+AGG | 0.425189 | 8.1:+21386103 | MS.gene62835:CDS |
| AGGTCGGTGTTTCTTCCTGT+TGG | 0.430254 | 8.1:+21386141 | MS.gene62835:CDS |
| TGCGTTCCATCCTGCTGCCA+TGG | 0.440434 | 8.1:-21385725 | None:intergenic |
| AAGCATGTTGATCAACGGTC+AGG | 0.453278 | 8.1:+21386252 | MS.gene62835:CDS |
| ATGTCAAGTCCCTTCCCAAC+AGG | 0.460059 | 8.1:-21386156 | None:intergenic |
| GGGAATTAAGGATTTGATGA+AGG | 0.460412 | 8.1:+21385987 | MS.gene62835:CDS |
| GGTCGGTGTTTCTTCCTGTT+GGG | 0.463683 | 8.1:+21386142 | MS.gene62835:CDS |
| GTGGCTAAGTTAAGTGTTAA+GGG | 0.463703 | 8.1:+21386018 | MS.gene62835:CDS |
| GTGTTTCTTCCTGTTGGGAA+GGG | 0.468303 | 8.1:+21386147 | MS.gene62835:CDS |
| ATAGCACATGTTTCAGCTGT+TGG | 0.469433 | 8.1:+21386177 | MS.gene62835:CDS |
| AAGAGAAAATGAAACTTGTC+TGG | 0.470997 | 8.1:+21385420 | None:intergenic |
| GGTGTTTCTTCCTGTTGGGA+AGG | 0.479058 | 8.1:+21386146 | MS.gene62835:CDS |
| CATTGAAGAGATAGATTTCG+TGG | 0.482218 | 8.1:+21385951 | MS.gene62835:CDS |
| CTGATTTCAGCCATGGCAGC+AGG | 0.486556 | 8.1:+21385715 | MS.gene62835:CDS |
| GATATTATTGTTGAGGAAGG+AGG | 0.500593 | 8.1:+21386096 | MS.gene62835:CDS |
| TGAAATCAGCTCCGCCATGC+CGG | 0.504005 | 8.1:-21385701 | None:intergenic |
| ACATCAACAGAAATCATTGT+AGG | 0.506787 | 8.1:+21385901 | MS.gene62835:CDS |
| GGTGTAATCGAAACAAGCTT+AGG | 0.508623 | 8.1:+21385778 | MS.gene62835:CDS |
| AGCACATGTTTCAGCTGTTG+GGG | 0.510606 | 8.1:+21386179 | MS.gene62835:CDS |
| GAGGATATTATTGTTGAGGA+AGG | 0.517535 | 8.1:+21386093 | MS.gene62835:CDS |
| GGCGGAGCTGATTTCAGCCA+TGG | 0.524952 | 8.1:+21385708 | MS.gene62835:CDS |
| GGAAAAGATGGTCATGGTCG+TGG | 0.531446 | 8.1:+21386210 | MS.gene62835:CDS |
| GTCACGTCGTGTTGTTAGGT+CGG | 0.536069 | 8.1:+21386125 | MS.gene62835:CDS |
| AGCATGTTGATCAACGGTCA+GGG | 0.549561 | 8.1:+21386253 | MS.gene62835:CDS |
| ATGGGAGGATATTATTGTTG+AGG | 0.550906 | 8.1:+21386089 | MS.gene62835:CDS |
| TTTCGTGGTGGTAGATTGTG+AGG | 0.551539 | 8.1:+21385966 | MS.gene62835:CDS |
| GTCGTGGTGGTAGTAAGAGA+TGG | 0.579545 | 8.1:+21386226 | MS.gene62835:CDS |
| TTTCAGCCATGGCAGCAGGA+TGG | 0.596118 | 8.1:+21385719 | MS.gene62835:CDS |
| ATAGTGGAAACATGGTCAGA+AGG | 0.600619 | 8.1:+21385754 | MS.gene62835:CDS |
| TTCGTGGTGGTAGATTGTGA+GGG | 0.604870 | 8.1:+21385967 | MS.gene62835:CDS |
| GGGAGGTGCATGTTATTAGA+CGG | 0.626486 | 8.1:+21386274 | MS.gene62835:CDS |
| GCATGTTGATCAACGGTCAG+GGG | 0.633202 | 8.1:+21386254 | MS.gene62835:CDS |
| GGATTAAGCATGTTGATCAA+CGG | 0.643256 | 8.1:+21386247 | MS.gene62835:CDS |
| TGTTGATCAACGGTCAGGGG+AGG | 0.647427 | 8.1:+21386257 | MS.gene62835:CDS |
| GTGGAAACATGGTCAGAAGG+AGG | 0.667051 | 8.1:+21385757 | MS.gene62835:CDS |
| AAAGATGGTCATGGTCGTGG+TGG | 0.675881 | 8.1:+21386213 | MS.gene62835:CDS |
| AATTTGGGAAAAGATGGTCA+TGG | 0.694637 | 8.1:+21386204 | MS.gene62835:CDS |
| GCACATGTTTCAGCTGTTGG+GGG | 0.717069 | 8.1:+21386180 | MS.gene62835:CDS |
| TGAAGAGATAGATTTCGTGG+TGG | 0.721855 | 8.1:+21385954 | MS.gene62835:CDS |
| TTTACGTGGATCCGGCATGG+CGG | 0.735740 | 8.1:+21385690 | MS.gene62835:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTATTCAAGATTAATA+TGG | - | chr8.1:21385547-21385566 | None:intergenic | 10.0% |
| !! | ATTATTATTAACAACAGTAA+CGG | - | chr8.1:21385645-21385664 | None:intergenic | 15.0% |
| !!! | TATGTAAGAATGTTAATTTT+AGG | + | chr8.1:21386052-21386071 | MS.gene62835:CDS | 15.0% |
| !! | ACTAGAGTACTCTAAAAAAA+TGG | + | chr8.1:21385867-21385886 | MS.gene62835:CDS | 25.0% |
| !! | CTAGAGTACTCTAAAAAAAT+GGG | + | chr8.1:21385868-21385887 | MS.gene62835:CDS | 25.0% |
| !!! | AAGAATGTTAATTTTAGGAG+TGG | + | chr8.1:21386057-21386076 | MS.gene62835:CDS | 25.0% |
| !!! | AGAATGTTAATTTTAGGAGT+GGG | + | chr8.1:21386058-21386077 | MS.gene62835:CDS | 25.0% |
| ACATCAACAGAAATCATTGT+AGG | + | chr8.1:21385901-21385920 | MS.gene62835:CDS | 30.0% | |
| TCTAAAAAAATGGGTGAACA+AGG | + | chr8.1:21385877-21385896 | MS.gene62835:CDS | 30.0% | |
| ! | ATAGCAAAAAAGCACACAAA+TGG | + | chr8.1:21385808-21385827 | MS.gene62835:CDS | 30.0% |
| ! | TAGCAAAAAAGCACACAAAT+GGG | + | chr8.1:21385809-21385828 | MS.gene62835:CDS | 30.0% |
| ! | TAGGAGTGGGAATTTTAAAT+GGG | + | chr8.1:21386071-21386090 | MS.gene62835:CDS | 30.0% |
| ! | TTAGGAGTGGGAATTTTAAA+TGG | + | chr8.1:21386070-21386089 | MS.gene62835:CDS | 30.0% |
| !! | CAAAAATGATAGTGGAAACA+TGG | + | chr8.1:21385746-21385765 | MS.gene62835:CDS | 30.0% |
| !!! | TCTAGTTTTGATATCTCGTT+TGG | - | chr8.1:21385853-21385872 | None:intergenic | 30.0% |
| AATTTGGGAAAAGATGGTCA+TGG | + | chr8.1:21386204-21386223 | MS.gene62835:CDS | 35.0% | |
| ATGGAACGCAAAAATGATAG+TGG | + | chr8.1:21385738-21385757 | MS.gene62835:CDS | 35.0% | |
| ATGGGAGGATATTATTGTTG+AGG | + | chr8.1:21386089-21386108 | MS.gene62835:CDS | 35.0% | |
| CATGTATGTGTGTAAGGATT+TGG | - | chr8.1:21385499-21385518 | None:intergenic | 35.0% | |
| CATTGAAGAGATAGATTTCG+TGG | + | chr8.1:21385951-21385970 | MS.gene62835:CDS | 35.0% | |
| GAGGATATTATTGTTGAGGA+AGG | + | chr8.1:21386093-21386112 | MS.gene62835:CDS | 35.0% | |
| GATATTATTGTTGAGGAAGG+AGG | + | chr8.1:21386096-21386115 | MS.gene62835:CDS | 35.0% | |
| GGATTAAGCATGTTGATCAA+CGG | + | chr8.1:21386247-21386266 | MS.gene62835:CDS | 35.0% | |
| GGGAATTAAGGATTTGATGA+AGG | + | chr8.1:21385987-21386006 | MS.gene62835:CDS | 35.0% | |
| GTGGCTAAGTTAAGTGTTAA+GGG | + | chr8.1:21386018-21386037 | MS.gene62835:CDS | 35.0% | |
| TTCATGCATGTATGTGTGTA+AGG | - | chr8.1:21385505-21385524 | None:intergenic | 35.0% | |
| !! | GGATTTGATGAAGGTTTTGA+AGG | + | chr8.1:21385996-21386015 | MS.gene62835:CDS | 35.0% |
| !!! | ATGCTTTTGATGCTGTTTCA+GGG | - | chr8.1:21385448-21385467 | None:intergenic | 35.0% |
| !!! | TATGCTTTTGATGCTGTTTC+AGG | - | chr8.1:21385449-21385468 | None:intergenic | 35.0% |
| !!! | TTTGATGAAGGTTTTGAAGG+TGG | + | chr8.1:21385999-21386018 | MS.gene62835:CDS | 35.0% |
| ATAGCACATGTTTCAGCTGT+TGG | + | chr8.1:21386177-21386196 | MS.gene62835:CDS | 40.0% | |
| GGTAGATTGTGAGGGAATTA+AGG | + | chr8.1:21385975-21385994 | MS.gene62835:CDS | 40.0% | |
| GGTGGCTAAGTTAAGTGTTA+AGG | + | chr8.1:21386017-21386036 | MS.gene62835:CDS | 40.0% | |
| GGTGTAATCGAAACAAGCTT+AGG | + | chr8.1:21385778-21385797 | MS.gene62835:CDS | 40.0% | |
| TAGCACATGTTTCAGCTGTT+GGG | + | chr8.1:21386178-21386197 | MS.gene62835:CDS | 40.0% | |
| TGAAGAGATAGATTTCGTGG+TGG | + | chr8.1:21385954-21385973 | MS.gene62835:CDS | 40.0% | |
| TTGTTGAGGAAGGAGGATTA+AGG | + | chr8.1:21386103-21386122 | MS.gene62835:CDS | 40.0% | |
| ! | ATAGTGGAAACATGGTCAGA+AGG | + | chr8.1:21385754-21385773 | MS.gene62835:CDS | 40.0% |
| ! | GAGTGGGAATTTTAAATGGG+AGG | + | chr8.1:21386074-21386093 | MS.gene62835:CDS | 40.0% |
| ! | GTAAAACCTTGCACTGATGT+AGG | - | chr8.1:21385675-21385694 | None:intergenic | 40.0% |
| !!! | TGCTTTTGATGCTGTTTCAG+GGG | - | chr8.1:21385447-21385466 | None:intergenic | 40.0% |
| AAGCATGTTGATCAACGGTC+AGG | + | chr8.1:21386252-21386271 | MS.gene62835:CDS | 45.0% | |
| AGCACATGTTTCAGCTGTTG+GGG | + | chr8.1:21386179-21386198 | MS.gene62835:CDS | 45.0% | |
| AGCATGTTGATCAACGGTCA+GGG | + | chr8.1:21386253-21386272 | MS.gene62835:CDS | 45.0% | |
| GGGGGTAATTTGGGAAAAGA+TGG | + | chr8.1:21386198-21386217 | MS.gene62835:CDS | 45.0% | |
| GTGTTTCTTCCTGTTGGGAA+GGG | + | chr8.1:21386147-21386166 | MS.gene62835:CDS | 45.0% | |
| TCAGCTGTTGGGGGTAATTT+GGG | + | chr8.1:21386189-21386208 | MS.gene62835:CDS | 45.0% | |
| TTCAGCTGTTGGGGGTAATT+TGG | + | chr8.1:21386188-21386207 | MS.gene62835:CDS | 45.0% | |
| TTCGTGGTGGTAGATTGTGA+GGG | + | chr8.1:21385967-21385986 | MS.gene62835:CDS | 45.0% | |
| TTCTGACCTACATCAGTGCA+AGG | + | chr8.1:21385666-21385685 | MS.gene62835:intron | 45.0% | |
| TTTCGTGGTGGTAGATTGTG+AGG | + | chr8.1:21385966-21385985 | MS.gene62835:CDS | 45.0% | |
| ! | CATCAGTGCAAGGTTTTACG+TGG | + | chr8.1:21385676-21385695 | MS.gene62835:intron | 45.0% |
| ! | GGGAGGTGCATGTTATTAGA+CGG | + | chr8.1:21386274-21386293 | MS.gene62835:CDS | 45.0% |
| ! | TAAGGTCACGTCGTGTTGTT+AGG | + | chr8.1:21386121-21386140 | MS.gene62835:CDS | 45.0% |
| ! | TGCAAGGTTTTACGTGGATC+CGG | + | chr8.1:21385682-21385701 | MS.gene62835:CDS | 45.0% |
| AAAGATGGTCATGGTCGTGG+TGG | + | chr8.1:21386213-21386232 | MS.gene62835:CDS | 50.0% | |
| ATGTCAAGTCCCTTCCCAAC+AGG | - | chr8.1:21386159-21386178 | None:intergenic | 50.0% | |
| GCACATGTTTCAGCTGTTGG+GGG | + | chr8.1:21386180-21386199 | MS.gene62835:CDS | 50.0% | |
| GCATGTTGATCAACGGTCAG+GGG | + | chr8.1:21386254-21386273 | MS.gene62835:CDS | 50.0% | |
| GGAAAAGATGGTCATGGTCG+TGG | + | chr8.1:21386210-21386229 | MS.gene62835:CDS | 50.0% | |
| GGTGTTTCTTCCTGTTGGGA+AGG | + | chr8.1:21386146-21386165 | MS.gene62835:CDS | 50.0% | |
| GTCGTGGTGGTAGTAAGAGA+TGG | + | chr8.1:21386226-21386245 | MS.gene62835:CDS | 50.0% | |
| GTGGAAACATGGTCAGAAGG+AGG | + | chr8.1:21385757-21385776 | MS.gene62835:CDS | 50.0% | |
| ! | AGGTCGGTGTTTCTTCCTGT+TGG | + | chr8.1:21386141-21386160 | MS.gene62835:CDS | 50.0% |
| ! | GGTCGGTGTTTCTTCCTGTT+GGG | + | chr8.1:21386142-21386161 | MS.gene62835:CDS | 50.0% |
| ! | GTCACGTCGTGTTGTTAGGT+CGG | + | chr8.1:21386125-21386144 | MS.gene62835:CDS | 50.0% |
| CTGATTTCAGCCATGGCAGC+AGG | + | chr8.1:21385715-21385734 | MS.gene62835:CDS | 55.0% | |
| TGAAATCAGCTCCGCCATGC+CGG | - | chr8.1:21385704-21385723 | None:intergenic | 55.0% | |
| TGTTGATCAACGGTCAGGGG+AGG | + | chr8.1:21386257-21386276 | MS.gene62835:CDS | 55.0% | |
| TTTACGTGGATCCGGCATGG+CGG | + | chr8.1:21385690-21385709 | MS.gene62835:CDS | 55.0% | |
| TTTCAGCCATGGCAGCAGGA+TGG | + | chr8.1:21385719-21385738 | MS.gene62835:CDS | 55.0% | |
| ! | GGTTTTACGTGGATCCGGCA+TGG | + | chr8.1:21385687-21385706 | MS.gene62835:CDS | 55.0% |
| TGCGTTCCATCCTGCTGCCA+TGG | - | chr8.1:21385728-21385747 | None:intergenic | 60.0% | |
| ! | GGCGGAGCTGATTTCAGCCA+TGG | + | chr8.1:21385708-21385727 | MS.gene62835:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 21385428 | 21386299 | 21385428 | ID=MS.gene62835 |
| chr8.1 | mRNA | 21385428 | 21386299 | 21385428 | ID=MS.gene62835.t1;Parent=MS.gene62835 |
| chr8.1 | exon | 21385428 | 21385487 | 21385428 | ID=MS.gene62835.t1.exon1;Parent=MS.gene62835.t1 |
| chr8.1 | CDS | 21385428 | 21385487 | 21385428 | ID=cds.MS.gene62835.t1;Parent=MS.gene62835.t1 |
| chr8.1 | exon | 21385682 | 21386299 | 21385682 | ID=MS.gene62835.t1.exon2;Parent=MS.gene62835.t1 |
| chr8.1 | CDS | 21385682 | 21386299 | 21385682 | ID=cds.MS.gene62835.t1;Parent=MS.gene62835.t1 |
| Gene Sequence |
| Protein sequence |
