Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66975.t1 | RHN50804.1 | 99.3 | 560 | 4 | 0 | 1 | 560 | 1 | 560 | 0.00E+00 | 1147.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66975.t1 | Q9FK51 | 52.7 | 334 | 154 | 2 | 28 | 358 | 16 | 348 | 3.0e-107 | 390.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66975.t1 | A0A396HG42 | 99.3 | 560 | 4 | 0 | 1 | 560 | 1 | 560 | 0.0e+00 | 1147.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene66975 | 0.833827 | 4.26E-56 | -1.69E-46 |
MS.gene049368 | MS.gene66975 | 0.807007 | 6.24E-50 | -1.69E-46 |
MS.gene049807 | MS.gene66975 | 0.801416 | 9.10E-49 | -1.69E-46 |
MS.gene049821 | MS.gene66975 | 0.833621 | 4.80E-56 | -1.69E-46 |
MS.gene049850 | MS.gene66975 | 0.813187 | 2.91E-51 | -1.69E-46 |
MS.gene050556 | MS.gene66975 | 0.822763 | 1.99E-53 | -1.69E-46 |
MS.gene050654 | MS.gene66975 | 0.813806 | 2.12E-51 | -1.69E-46 |
MS.gene050689 | MS.gene66975 | 0.804481 | 2.12E-49 | -1.69E-46 |
MS.gene050838 | MS.gene66975 | 0.829684 | 4.49E-55 | -1.69E-46 |
MS.gene051003 | MS.gene66975 | 0.831429 | 1.68E-55 | -1.69E-46 |
MS.gene051198 | MS.gene66975 | 0.808796 | 2.60E-50 | -1.69E-46 |
MS.gene051247 | MS.gene66975 | 0.805817 | 1.11E-49 | -1.69E-46 |
MS.gene051328 | MS.gene66975 | 0.802118 | 6.53E-49 | -1.69E-46 |
MS.gene051343 | MS.gene66975 | 0.848748 | 5.03E-60 | -1.69E-46 |
MS.gene051676 | MS.gene66975 | 0.803706 | 3.07E-49 | -1.69E-46 |
MS.gene051700 | MS.gene66975 | 0.807467 | 4.98E-50 | -1.69E-46 |
MS.gene051744 | MS.gene66975 | 0.807484 | 4.94E-50 | -1.69E-46 |
MS.gene05188 | MS.gene66975 | 0.818356 | 2.05E-52 | -1.69E-46 |
MS.gene051975 | MS.gene66975 | 0.839069 | 1.98E-57 | -1.69E-46 |
MS.gene052335 | MS.gene66975 | 0.840637 | 7.71E-58 | -1.69E-46 |
MS.gene052342 | MS.gene66975 | 0.818186 | 2.24E-52 | -1.69E-46 |
MS.gene052516 | MS.gene66975 | 0.812686 | 3.74E-51 | -1.69E-46 |
MS.gene052609 | MS.gene66975 | 0.811262 | 7.65E-51 | -1.69E-46 |
MS.gene052947 | MS.gene66975 | 0.804017 | 2.64E-49 | -1.69E-46 |
MS.gene053058 | MS.gene66975 | 0.830151 | 3.45E-55 | -1.69E-46 |
MS.gene053079 | MS.gene66975 | 0.843932 | 1.03E-58 | -1.69E-46 |
MS.gene053122 | MS.gene66975 | 0.81988 | 9.21E-53 | -1.69E-46 |
MS.gene05315 | MS.gene66975 | 0.803099 | 4.10E-49 | -1.69E-46 |
MS.gene053226 | MS.gene66975 | 0.831978 | 1.23E-55 | -1.69E-46 |
MS.gene053581 | MS.gene66975 | 0.80667 | 7.35E-50 | -1.69E-46 |
MS.gene054139 | MS.gene66975 | 0.831141 | 1.97E-55 | -1.69E-46 |
MS.gene05517 | MS.gene66975 | 0.824083 | 9.78E-54 | -1.69E-46 |
MS.gene055311 | MS.gene66975 | 0.823449 | 1.38E-53 | -1.69E-46 |
MS.gene055313 | MS.gene66975 | 0.827525 | 1.49E-54 | -1.69E-46 |
MS.gene055465 | MS.gene66975 | 0.809576 | 1.77E-50 | -1.69E-46 |
MS.gene055466 | MS.gene66975 | 0.805554 | 1.26E-49 | -1.69E-46 |
MS.gene055468 | MS.gene66975 | 0.823611 | 1.26E-53 | -1.69E-46 |
MS.gene055469 | MS.gene66975 | 0.838553 | 2.69E-57 | -1.69E-46 |
MS.gene055513 | MS.gene66975 | 0.843651 | 1.23E-58 | -1.69E-46 |
MS.gene055623 | MS.gene66975 | 0.805825 | 1.11E-49 | -1.69E-46 |
MS.gene056045 | MS.gene66975 | 0.802261 | 6.10E-49 | -1.69E-46 |
MS.gene056174 | MS.gene66975 | 0.820679 | 6.04E-53 | -1.69E-46 |
MS.gene056181 | MS.gene66975 | 0.815453 | 9.17E-52 | -1.69E-46 |
MS.gene056215 | MS.gene66975 | 0.812533 | 4.04E-51 | -1.69E-46 |
MS.gene056308 | MS.gene66975 | 0.851331 | 9.51E-61 | -1.69E-46 |
MS.gene056390 | MS.gene66975 | 0.822785 | 1.97E-53 | -1.69E-46 |
MS.gene056507 | MS.gene66975 | 0.800541 | 1.37E-48 | -1.69E-46 |
MS.gene056580 | MS.gene66975 | 0.801037 | 1.09E-48 | -1.69E-46 |
MS.gene056699 | MS.gene66975 | 0.805065 | 1.60E-49 | -1.69E-46 |
MS.gene056776 | MS.gene66975 | 0.82461 | 7.35E-54 | -1.69E-46 |
MS.gene056787 | MS.gene66975 | 0.818874 | 1.56E-52 | -1.69E-46 |
MS.gene05689 | MS.gene66975 | 0.806791 | 6.93E-50 | -1.69E-46 |
MS.gene056986 | MS.gene66975 | 0.819298 | 1.25E-52 | -1.69E-46 |
MS.gene057034 | MS.gene66975 | 0.806321 | 8.71E-50 | -1.69E-46 |
MS.gene057102 | MS.gene66975 | 0.812945 | 3.28E-51 | -1.69E-46 |
MS.gene057320 | MS.gene66975 | 0.812279 | 4.59E-51 | -1.69E-46 |
MS.gene057360 | MS.gene66975 | 0.820531 | 6.53E-53 | -1.69E-46 |
MS.gene057890 | MS.gene66975 | -0.803967 | 2.71E-49 | -1.69E-46 |
MS.gene057915 | MS.gene66975 | 0.809036 | 2.31E-50 | -1.69E-46 |
MS.gene05847 | MS.gene66975 | 0.813584 | 2.38E-51 | -1.69E-46 |
MS.gene058639 | MS.gene66975 | 0.812168 | 4.85E-51 | -1.69E-46 |
MS.gene059146 | MS.gene66975 | 0.818628 | 1.77E-52 | -1.69E-46 |
MS.gene059170 | MS.gene66975 | 0.821782 | 3.36E-53 | -1.69E-46 |
MS.gene059227 | MS.gene66975 | 0.809879 | 1.52E-50 | -1.69E-46 |
MS.gene059625 | MS.gene66975 | 0.810815 | 9.56E-51 | -1.69E-46 |
MS.gene059725 | MS.gene66975 | 0.840627 | 7.76E-58 | -1.69E-46 |
MS.gene059842 | MS.gene66975 | 0.800021 | 1.75E-48 | -1.69E-46 |
MS.gene05985 | MS.gene66975 | -0.801641 | 8.18E-49 | -1.69E-46 |
MS.gene060296 | MS.gene66975 | 0.808197 | 3.49E-50 | -1.69E-46 |
MS.gene060365 | MS.gene66975 | 0.819548 | 1.10E-52 | -1.69E-46 |
MS.gene060429 | MS.gene66975 | 0.823589 | 1.28E-53 | -1.69E-46 |
MS.gene060587 | MS.gene66975 | 0.800213 | 1.60E-48 | -1.69E-46 |
MS.gene060803 | MS.gene66975 | 0.803122 | 4.05E-49 | -1.69E-46 |
MS.gene061006 | MS.gene66975 | 0.836732 | 7.87E-57 | -1.69E-46 |
MS.gene061100 | MS.gene66975 | 0.838582 | 2.64E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66975.t1 | MTR_6g029530 | 99.102 | 557 | 5 | 0 | 4 | 560 | 123 | 679 | 0.0 | 1152 |
MS.gene66975.t1 | MTR_6g029470 | 63.557 | 343 | 119 | 4 | 22 | 360 | 1 | 341 | 2.30e-149 | 432 |
MS.gene66975.t1 | MTR_6g029470 | 59.690 | 258 | 98 | 4 | 22 | 275 | 1 | 256 | 5.77e-98 | 298 |
MS.gene66975.t1 | MTR_1g012760 | 39.548 | 177 | 97 | 3 | 374 | 550 | 41 | 207 | 8.44e-35 | 133 |
MS.gene66975.t1 | MTR_1g012760 | 39.548 | 177 | 97 | 3 | 374 | 550 | 30 | 196 | 1.07e-34 | 132 |
MS.gene66975.t1 | MTR_3g072200 | 41.463 | 164 | 88 | 2 | 389 | 551 | 55 | 211 | 1.25e-31 | 129 |
MS.gene66975.t1 | MTR_3g116710 | 39.881 | 168 | 93 | 4 | 374 | 538 | 71 | 233 | 1.49e-28 | 114 |
MS.gene66975.t1 | MTR_3g077875 | 36.559 | 186 | 99 | 3 | 379 | 557 | 78 | 251 | 2.07e-28 | 115 |
MS.gene66975.t1 | MTR_2g090505 | 38.150 | 173 | 101 | 3 | 379 | 550 | 83 | 250 | 5.91e-28 | 114 |
MS.gene66975.t1 | MTR_7g056020 | 37.427 | 171 | 81 | 2 | 379 | 549 | 383 | 527 | 1.18e-27 | 117 |
MS.gene66975.t1 | MTR_2g023130 | 33.708 | 178 | 71 | 1 | 373 | 550 | 18 | 148 | 1.78e-27 | 110 |
MS.gene66975.t1 | MTR_1g099140 | 36.416 | 173 | 104 | 3 | 379 | 550 | 83 | 250 | 8.94e-26 | 111 |
MS.gene66975.t1 | MTR_3g015530 | 34.783 | 161 | 97 | 3 | 379 | 538 | 49 | 202 | 1.58e-24 | 103 |
MS.gene66975.t1 | MTR_6g464570 | 38.255 | 149 | 85 | 3 | 374 | 520 | 9 | 152 | 2.30e-24 | 99.8 |
MS.gene66975.t1 | MTR_4g057300 | 41.176 | 119 | 69 | 1 | 434 | 551 | 4 | 122 | 3.25e-23 | 101 |
MS.gene66975.t1 | MTR_6g075990 | 35.294 | 170 | 101 | 3 | 379 | 547 | 78 | 239 | 1.35e-22 | 97.8 |
MS.gene66975.t1 | MTR_3g034840 | 36.601 | 153 | 84 | 3 | 380 | 528 | 69 | 212 | 1.57e-22 | 96.7 |
MS.gene66975.t1 | MTR_0599s0020 | 36.601 | 153 | 84 | 3 | 380 | 528 | 69 | 212 | 1.57e-22 | 96.7 |
MS.gene66975.t1 | MTR_4g119600 | 35.294 | 170 | 101 | 3 | 379 | 547 | 60 | 221 | 3.24e-22 | 98.6 |
MS.gene66975.t1 | MTR_5g006100 | 36.628 | 172 | 88 | 5 | 394 | 557 | 69 | 227 | 3.42e-22 | 101 |
MS.gene66975.t1 | MTR_1g058140 | 40.351 | 114 | 67 | 1 | 439 | 552 | 84 | 196 | 6.67e-22 | 95.1 |
MS.gene66975.t1 | MTR_2g067930 | 38.462 | 143 | 80 | 2 | 410 | 551 | 59 | 194 | 1.71e-21 | 92.8 |
MS.gene66975.t1 | MTR_1g081740 | 32.317 | 164 | 75 | 2 | 379 | 542 | 62 | 189 | 2.85e-21 | 92.0 |
MS.gene66975.t1 | MTR_3g067290 | 29.952 | 207 | 126 | 6 | 346 | 545 | 27 | 221 | 3.09e-21 | 92.8 |
MS.gene66975.t1 | MTR_3g087440 | 37.179 | 156 | 79 | 3 | 385 | 533 | 84 | 227 | 3.34e-21 | 93.2 |
MS.gene66975.t1 | MTR_5g046160 | 36.000 | 150 | 72 | 3 | 394 | 542 | 55 | 181 | 7.98e-21 | 92.8 |
MS.gene66975.t1 | MTR_2g461140 | 34.254 | 181 | 83 | 6 | 371 | 550 | 36 | 181 | 2.99e-20 | 89.0 |
MS.gene66975.t1 | MTR_3g462670 | 37.815 | 119 | 73 | 1 | 434 | 551 | 63 | 181 | 4.75e-20 | 89.7 |
MS.gene66975.t1 | MTR_5g046145 | 36.735 | 147 | 78 | 3 | 385 | 530 | 125 | 257 | 2.57e-19 | 90.1 |
MS.gene66975.t1 | MTR_5g031650 | 28.807 | 243 | 137 | 8 | 302 | 529 | 4 | 225 | 4.29e-19 | 87.0 |
MS.gene66975.t1 | MTR_5g032220 | 32.558 | 172 | 96 | 2 | 379 | 550 | 71 | 222 | 2.44e-18 | 88.6 |
MS.gene66975.t1 | MTR_2g026585 | 31.792 | 173 | 82 | 2 | 379 | 551 | 63 | 199 | 3.05e-18 | 87.0 |
MS.gene66975.t1 | MTR_8g107490 | 31.746 | 189 | 108 | 6 | 353 | 538 | 21 | 191 | 8.34e-18 | 84.7 |
MS.gene66975.t1 | MTR_4g057975 | 31.429 | 175 | 98 | 5 | 351 | 523 | 37 | 191 | 1.59e-17 | 81.6 |
MS.gene66975.t1 | MTR_8g445570 | 37.000 | 100 | 62 | 1 | 451 | 550 | 4 | 102 | 1.83e-17 | 78.6 |
MS.gene66975.t1 | MTR_4g120790 | 33.333 | 168 | 75 | 3 | 377 | 544 | 62 | 192 | 2.22e-17 | 82.0 |
MS.gene66975.t1 | MTR_8g020433 | 37.607 | 117 | 70 | 1 | 434 | 550 | 62 | 175 | 4.80e-17 | 84.3 |
MS.gene66975.t1 | MTR_3g030230 | 40.541 | 111 | 64 | 2 | 420 | 529 | 61 | 170 | 4.88e-17 | 79.3 |
MS.gene66975.t1 | MTR_7g065910 | 34.375 | 128 | 72 | 2 | 422 | 546 | 24 | 142 | 8.72e-17 | 82.8 |
MS.gene66975.t1 | MTR_4g051638 | 36.000 | 125 | 72 | 2 | 379 | 502 | 123 | 240 | 1.40e-16 | 80.1 |
MS.gene66975.t1 | MTR_0156s0040 | 36.434 | 129 | 79 | 1 | 432 | 557 | 2 | 130 | 1.84e-16 | 78.2 |
MS.gene66975.t1 | MTR_7g050385 | 33.333 | 123 | 74 | 2 | 379 | 500 | 114 | 229 | 2.19e-16 | 79.3 |
MS.gene66975.t1 | MTR_8g103800 | 37.374 | 99 | 62 | 0 | 452 | 550 | 96 | 194 | 3.27e-16 | 79.7 |
MS.gene66975.t1 | MTR_4g113170 | 42.045 | 88 | 51 | 0 | 463 | 550 | 74 | 161 | 1.03e-15 | 80.9 |
MS.gene66975.t1 | MTR_8g009330 | 31.953 | 169 | 93 | 4 | 350 | 517 | 65 | 212 | 1.10e-15 | 77.0 |
MS.gene66975.t1 | MTR_1g080040 | 38.318 | 107 | 63 | 1 | 432 | 535 | 1 | 107 | 2.16e-15 | 73.9 |
MS.gene66975.t1 | MTR_0528s0010 | 38.017 | 121 | 69 | 3 | 440 | 555 | 1 | 120 | 3.19e-15 | 73.2 |
MS.gene66975.t1 | MTR_7g106560 | 36.449 | 107 | 60 | 1 | 453 | 551 | 75 | 181 | 8.85e-15 | 73.6 |
MS.gene66975.t1 | MTR_1g043440 | 42.500 | 80 | 46 | 0 | 470 | 549 | 171 | 250 | 1.21e-14 | 75.5 |
MS.gene66975.t1 | MTR_1g059880 | 36.522 | 115 | 65 | 2 | 375 | 488 | 67 | 174 | 1.30e-14 | 73.6 |
MS.gene66975.t1 | MTR_7g034570 | 35.593 | 118 | 69 | 1 | 427 | 544 | 71 | 181 | 3.11e-14 | 71.6 |
MS.gene66975.t1 | MTR_5g046245 | 42.222 | 90 | 50 | 2 | 462 | 550 | 6 | 94 | 5.50e-14 | 72.0 |
MS.gene66975.t1 | MTR_0116s0050 | 25.907 | 193 | 93 | 3 | 359 | 551 | 30 | 172 | 1.96e-13 | 68.9 |
MS.gene66975.t1 | MTR_4g100470 | 41.463 | 82 | 48 | 0 | 463 | 544 | 78 | 159 | 2.00e-13 | 69.7 |
MS.gene66975.t1 | MTR_2g027000 | 41.975 | 81 | 45 | 1 | 470 | 548 | 94 | 174 | 2.45e-13 | 68.9 |
MS.gene66975.t1 | MTR_6g089230 | 34.694 | 98 | 46 | 1 | 453 | 550 | 46 | 125 | 2.93e-13 | 70.1 |
MS.gene66975.t1 | MTR_3g437000 | 36.364 | 99 | 55 | 2 | 377 | 474 | 39 | 130 | 4.06e-12 | 63.9 |
MS.gene66975.t1 | MTR_7g024830 | 44.828 | 58 | 32 | 0 | 494 | 551 | 7 | 64 | 4.80e-12 | 62.0 |
MS.gene66975.t1 | MTR_8g028020 | 43.590 | 78 | 40 | 1 | 482 | 555 | 4 | 81 | 5.70e-12 | 63.5 |
MS.gene66975.t1 | MTR_1g098990 | 27.219 | 169 | 85 | 1 | 379 | 547 | 60 | 190 | 9.64e-12 | 66.2 |
MS.gene66975.t1 | MTR_8g038805 | 38.961 | 77 | 46 | 1 | 434 | 509 | 55 | 131 | 1.53e-11 | 62.4 |
MS.gene66975.t1 | MTR_3g467720 | 39.437 | 71 | 43 | 0 | 475 | 545 | 69 | 139 | 3.52e-11 | 61.6 |
MS.gene66975.t1 | MTR_5g079560 | 32.308 | 130 | 64 | 4 | 379 | 501 | 74 | 186 | 4.02e-11 | 63.9 |
MS.gene66975.t1 | MTR_7g060350 | 38.028 | 71 | 44 | 0 | 453 | 523 | 105 | 175 | 4.71e-11 | 62.4 |
MS.gene66975.t1 | MTR_1g052890 | 35.632 | 87 | 56 | 0 | 464 | 550 | 2 | 88 | 5.99e-11 | 64.3 |
MS.gene66975.t1 | MTR_2g030640 | 47.458 | 59 | 31 | 0 | 479 | 537 | 1 | 59 | 6.40e-11 | 58.5 |
MS.gene66975.t1 | MTR_7g050365 | 31.034 | 116 | 55 | 2 | 437 | 551 | 20 | 111 | 7.44e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66975.t1 | AT5G18200 | 52.695 | 334 | 154 | 2 | 28 | 358 | 16 | 348 | 1.02e-130 | 385 |
Find 126 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGGAAAACAACTGTGATTT+TGG | 0.113532 | 6.4:+3910020 | MS.gene66975:CDS |
GAAGAAAGCTTCGGACTTTA+AGG | 0.118306 | 6.4:+3904475 | MS.gene66975:CDS |
GAAAGAACGAATGGTGAATT+AGG | 0.182607 | 6.4:-3904237 | None:intergenic |
TCAGAATTCAATTACCTCTT+TGG | 0.260195 | 6.4:-3909794 | None:intergenic |
CCATTTCATCATCCAATTCA+TGG | 0.288659 | 6.4:-3907698 | None:intergenic |
GTTGGATGGCGGTGAGGTTT+TGG | 0.289225 | 6.4:+3904676 | MS.gene66975:CDS |
CTCGAGAGTATCTGCTGAAT+TGG | 0.290913 | 6.4:+3909917 | MS.gene66975:CDS |
AGAATTAGAAATGGAAAATT+CGG | 0.308880 | 6.4:+3910395 | MS.gene66975:CDS |
CTCTGCACACTTCCATGAAT+TGG | 0.309156 | 6.4:+3907686 | MS.gene66975:CDS |
ATGAACCGAATTGGAAGATT+AGG | 0.317682 | 6.4:+3904600 | MS.gene66975:CDS |
GAAACATTGTTTGGAACAAT+TGG | 0.325735 | 6.4:-3907498 | None:intergenic |
GCGTTTGCCACCAACGGTTT+TGG | 0.330783 | 6.4:-3904199 | None:intergenic |
AATCAACTGTTTGGAATGAA+TGG | 0.338993 | 6.4:+3904429 | MS.gene66975:CDS |
CATCCATCACCATTTCTAAC+AGG | 0.340093 | 6.4:-3910141 | None:intergenic |
TCGCAGTTTCAATTACTTCA+TGG | 0.342193 | 6.4:-3910194 | None:intergenic |
CAGTAATAGGATCAGAGAAT+TGG | 0.347025 | 6.4:+3904799 | MS.gene66975:CDS |
TTTACCGAAAATCAACTGTT+TGG | 0.353650 | 6.4:+3904420 | MS.gene66975:CDS |
GCAGCATCCTCAGGCAAAAC+AGG | 0.393377 | 6.4:-3909098 | None:intergenic |
CTCCTCAAAACCGCCGGATT+CGG | 0.396406 | 6.4:-3904635 | None:intergenic |
AAAGAACGAATGGTGAATTA+GGG | 0.400381 | 6.4:-3904236 | None:intergenic |
TGAGTCTATCAAATATGTTC+AGG | 0.400935 | 6.4:+3904829 | MS.gene66975:CDS |
TGAACCGAATTGGAAGATTA+GGG | 0.405403 | 6.4:+3904601 | MS.gene66975:CDS |
AGACGGGCAGAAACATTGTT+TGG | 0.406511 | 6.4:-3907507 | None:intergenic |
AATGTCTGTAATATGTCTTT+CGG | 0.410278 | 6.4:-3910294 | None:intergenic |
AAGAAAGCTTCGGACTTTAA+GGG | 0.410858 | 6.4:+3904476 | MS.gene66975:CDS |
TTCCGTTTGATGAACCGAAT+TGG | 0.416004 | 6.4:+3904591 | MS.gene66975:CDS |
CCATGAATTGGATGATGAAA+TGG | 0.416074 | 6.4:+3907698 | MS.gene66975:CDS |
TTCTAGATTAGAATTAGAAA+TGG | 0.416916 | 6.4:+3910386 | MS.gene66975:CDS |
TTCCAATTCGGTTCATCAAA+CGG | 0.423615 | 6.4:-3904593 | None:intergenic |
CTGAATTGGGCACGAGCCAT+TGG | 0.424435 | 6.4:+3909931 | MS.gene66975:CDS |
AACAATGTTTCTGCCCGTCT+TGG | 0.431095 | 6.4:+3907510 | MS.gene66975:CDS |
GATGATGGGTTTGTGTTGGA+TGG | 0.432960 | 6.4:+3904662 | MS.gene66975:CDS |
CAGAGCTGGCATACAGTCAT+TGG | 0.433137 | 6.4:+3909006 | MS.gene66975:CDS |
GGAAGTGTGCAGAGTGATAC+CGG | 0.436493 | 6.4:-3907677 | None:intergenic |
ACTAGTCCATTGCGTGGTGA+TGG | 0.443182 | 6.4:+3908981 | MS.gene66975:CDS |
GGTGCATTCGGAGCAGTTGT+TGG | 0.443840 | 6.4:+3904736 | MS.gene66975:CDS |
CCTCAGCTGATTCCGACAAC+TGG | 0.444495 | 6.4:+3909044 | MS.gene66975:CDS |
ATCCTTCATATTTCCAAGAC+GGG | 0.444712 | 6.4:-3907523 | None:intergenic |
GATTGAAAGTCCGGTGCATT+CGG | 0.445242 | 6.4:+3904724 | MS.gene66975:CDS |
AGAATCTTTGCAGCATCCTC+AGG | 0.453021 | 6.4:-3909107 | None:intergenic |
TCATTCTCATAGTCAAATCC+TGG | 0.454234 | 6.4:+3907470 | MS.gene66975:CDS |
GATGCATTAGCTCGCAAGAC+TGG | 0.455880 | 6.4:+3910078 | MS.gene66975:CDS |
ATTTGGATCTTCTTCCTCAT+CGG | 0.456914 | 6.4:-3904393 | None:intergenic |
ACAACCCTAATCTTCCAATT+CGG | 0.457062 | 6.4:-3904605 | None:intergenic |
TGCCCGTCTTGGAAATATGA+AGG | 0.460206 | 6.4:+3907521 | MS.gene66975:CDS |
GGTTGTTGAGAGTCCGAATC+CGG | 0.461837 | 6.4:+3904622 | MS.gene66975:CDS |
ATCAACTGTTTGGAATGAAT+GGG | 0.467033 | 6.4:+3904430 | MS.gene66975:CDS |
GAGCCATTGGGAGAGAGCAC+GGG | 0.469261 | 6.4:+3909944 | MS.gene66975:CDS |
TTTGGATGATGGGTTTGTGT+TGG | 0.469528 | 6.4:+3904658 | MS.gene66975:CDS |
TTGAGATATGGGTTGTTCCC+CGG | 0.472936 | 6.4:+3907658 | MS.gene66975:CDS |
TCGAGAGTATCTGCTGAATT+GGG | 0.475872 | 6.4:+3909918 | MS.gene66975:CDS |
CTATAATCCACAATCTTAGT+TGG | 0.475886 | 6.4:-3909757 | None:intergenic |
GAATTCAATTACCTCTTTGG+TGG | 0.480591 | 6.4:-3909791 | None:intergenic |
CGTATAATACGAATCCTAGT+AGG | 0.484679 | 6.4:+3904507 | MS.gene66975:CDS |
AGAGGAAGACCTGTTAGAAA+TGG | 0.484950 | 6.4:+3910132 | MS.gene66975:CDS |
AAAACCTCGCCAACATCCTT+CGG | 0.485711 | 6.4:-3904767 | None:intergenic |
TGAATTGGGCACGAGCCATT+GGG | 0.487838 | 6.4:+3909932 | MS.gene66975:CDS |
TGATGTTGTGATTGAAAGTC+CGG | 0.491355 | 6.4:+3904715 | MS.gene66975:CDS |
CGAGCCATTGGGAGAGAGCA+CGG | 0.499186 | 6.4:+3909943 | MS.gene66975:CDS |
TTACAGGCACTTGATCTTGG+AGG | 0.500262 | 6.4:+3908888 | MS.gene66975:intron |
AAGTGGCGAAGAGAAGTCTT+TGG | 0.504021 | 6.4:+3910242 | MS.gene66975:CDS |
AAAAGACATCTTTCTAAGAG+TGG | 0.507146 | 6.4:-3908922 | None:intergenic |
GGAACAACCCATATCTCAAA+AGG | 0.510202 | 6.4:-3907654 | None:intergenic |
CCAAGCTCAAAACCAGTTGT+CGG | 0.513221 | 6.4:-3909056 | None:intergenic |
AAGTAATTGAAACTGCGATC+GGG | 0.517225 | 6.4:+3910199 | MS.gene66975:CDS |
GATGGGTTTGTGTTGGATGG+CGG | 0.517434 | 6.4:+3904665 | MS.gene66975:CDS |
GTGTGAATCATAAAGTTGTA+TGG | 0.517550 | 6.4:-3908960 | None:intergenic |
TTTACCTCCAACTAAGATTG+TGG | 0.530003 | 6.4:+3909750 | MS.gene66975:CDS |
ACCATTCGTTCTTTCAACAC+TGG | 0.531477 | 6.4:+3904245 | MS.gene66975:CDS |
GATTGAAGAAGAGGATAGGA+AGG | 0.534376 | 6.4:+3910001 | MS.gene66975:CDS |
TATTTGTGACATTCAACTTG+AGG | 0.538401 | 6.4:+3907572 | MS.gene66975:CDS |
CTAGTCCATTGCGTGGTGAT+GGG | 0.539912 | 6.4:+3908982 | MS.gene66975:CDS |
GATTTGACGCCGAAGGATGT+TGG | 0.540124 | 6.4:+3904758 | MS.gene66975:CDS |
CGGAACCAATGAAAAGAAGT+AGG | 0.542610 | 6.4:-3907616 | None:intergenic |
AGATAAAACGAAGAAAGCTT+CGG | 0.545303 | 6.4:+3904466 | MS.gene66975:CDS |
TTGGAACAATTGGCAAGCCC+AGG | 0.545421 | 6.4:-3907488 | None:intergenic |
ACACACGGCTTATTCCTACT+AGG | 0.547965 | 6.4:-3904521 | None:intergenic |
AGAAAGCTTCGGACTTTAAG+GGG | 0.551243 | 6.4:+3904477 | MS.gene66975:CDS |
GTTGTTGGATTTGACGCCGA+AGG | 0.553373 | 6.4:+3904751 | MS.gene66975:CDS |
TAATCCACAATCTTAGTTGG+AGG | 0.553577 | 6.4:-3909754 | None:intergenic |
ATGAGAACCAAAACCGTTGG+TGG | 0.555752 | 6.4:+3904192 | MS.gene66975:CDS |
CGAACGGCGTTTGCCACCAA+CGG | 0.555890 | 6.4:-3904205 | None:intergenic |
TAACAGGTCTTCCTCTCAGT+CGG | 0.558034 | 6.4:-3910125 | None:intergenic |
AACAACTGCTCCGAATGCAC+CGG | 0.558050 | 6.4:-3904734 | None:intergenic |
ACATATGCCGGTCGGCTAAG+TGG | 0.558333 | 6.4:+3910225 | MS.gene66975:CDS |
AATCCTTCATATTTCCAAGA+CGG | 0.559891 | 6.4:-3907524 | None:intergenic |
GGTCTTCCTCTCAGTCGGAA+TGG | 0.566394 | 6.4:-3910120 | None:intergenic |
TCCAAACTCCTCAAAACCGC+CGG | 0.568354 | 6.4:-3904641 | None:intergenic |
AAAGGAAATGAAGCAGCAAA+CGG | 0.568655 | 6.4:-3907636 | None:intergenic |
GAAGTGTGCAGAGTGATACC+GGG | 0.570950 | 6.4:-3907676 | None:intergenic |
GCGTGGTGATGGGTCAGAGC+TGG | 0.574501 | 6.4:+3908992 | MS.gene66975:CDS |
CATTCTCATAGTCAAATCCT+GGG | 0.575192 | 6.4:+3907471 | MS.gene66975:CDS |
GAAGTAATTGAAACTGCGAT+CGG | 0.582267 | 6.4:+3910198 | MS.gene66975:CDS |
TTCCTGTGTTTGCACATGAA+AGG | 0.585708 | 6.4:+3909144 | MS.gene66975:CDS |
AAGACTGGAACAAAGAAATG+TGG | 0.586177 | 6.4:+3910093 | MS.gene66975:CDS |
ACAATGGCGGATTGAAGAAG+AGG | 0.587218 | 6.4:+3909992 | MS.gene66975:CDS |
CTCTTCGCCACTTAGCCGAC+CGG | 0.590945 | 6.4:-3910232 | None:intergenic |
TACCTTTCATGTGCAAACAC+AGG | 0.597392 | 6.4:-3909146 | None:intergenic |
ACCATGAGAACCAAAACCGT+TGG | 0.597638 | 6.4:+3904189 | None:intergenic |
TGGAAAATATAGACAATACA+AGG | 0.599857 | 6.4:+3910056 | MS.gene66975:CDS |
AAGCCGTGTGTGTATTGCAT+TGG | 0.600783 | 6.4:+3904533 | MS.gene66975:CDS |
GTTTGTGTTGGATGGCGGTG+AGG | 0.606103 | 6.4:+3904670 | MS.gene66975:CDS |
GCGATCGGGAGCACATATGC+CGG | 0.610976 | 6.4:+3910213 | MS.gene66975:CDS |
ACCAGTGTTGAAAGAACGAA+TGG | 0.618296 | 6.4:-3904246 | None:intergenic |
CTGTTAGAAATGGTGATGGA+TGG | 0.620170 | 6.4:+3910142 | MS.gene66975:CDS |
AAACCCGTGCTCTCTCCCAA+TGG | 0.622311 | 6.4:-3909947 | None:intergenic |
AGACCTGTTAGAAATGGTGA+TGG | 0.628565 | 6.4:+3910138 | MS.gene66975:CDS |
GACGCCGAAGGATGTTGGCG+AGG | 0.629659 | 6.4:+3904763 | MS.gene66975:CDS |
TGATGCATTCACCACCAAAG+AGG | 0.630981 | 6.4:+3909780 | MS.gene66975:CDS |
TGTTGAGAGTCCGAATCCGG+CGG | 0.631477 | 6.4:+3904625 | MS.gene66975:CDS |
GGCGGATTGAAGAAGAGGAT+AGG | 0.632863 | 6.4:+3909997 | MS.gene66975:CDS |
TCTGACCCATCACCACGCAA+TGG | 0.638701 | 6.4:-3908987 | None:intergenic |
AGACTGGAACAAAGAAATGT+GGG | 0.639374 | 6.4:+3910094 | MS.gene66975:CDS |
AATTAGGGTTGATTAACGAA+CGG | 0.647083 | 6.4:-3904221 | None:intergenic |
CCAGTTGTCGGAATCAGCTG+AGG | 0.654012 | 6.4:-3909044 | None:intergenic |
TTCAGCAGATACTCTCGAGT+AGG | 0.654168 | 6.4:-3909913 | None:intergenic |
GGGTGTCCATTCCGACTGAG+AGG | 0.661322 | 6.4:+3910114 | MS.gene66975:CDS |
ATCATTCAAAGATCAGACAA+TGG | 0.661996 | 6.4:+3909976 | MS.gene66975:CDS |
TGGAAAGTGAACGTAGTGTG+TGG | 0.664110 | 6.4:+3910162 | MS.gene66975:CDS |
TGACCAATGCAATACACACA+CGG | 0.674183 | 6.4:-3904536 | None:intergenic |
TCGGGAGCACATATGCCGGT+CGG | 0.680903 | 6.4:+3910217 | MS.gene66975:CDS |
TGAATCATAAAGTTGTATGG+CGG | 0.697778 | 6.4:-3908957 | None:intergenic |
ATTCAAAGATCAGACAATGG+CGG | 0.698505 | 6.4:+3909979 | MS.gene66975:CDS |
TCATGAAGATGAATGTAGTG+AGG | 0.706412 | 6.4:+3904556 | MS.gene66975:CDS |
ATTCACACTAGTCCATTGCG+TGG | 0.708834 | 6.4:+3908975 | MS.gene66975:CDS |
AAGTGTGCAGAGTGATACCG+GGG | 0.743726 | 6.4:-3907675 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTTTTTTTTTTTA+AGG | + | chr6.4:3909817-3909836 | MS.gene66975:intron | 0.0% |
!! | TTGAAAAATTAAATAAGAAA+TGG | + | chr6.4:3907923-3907942 | MS.gene66975:intron | 10.0% |
!! | AAATAAATGTCAAGATATAA+TGG | - | chr6.4:3908869-3908888 | None:intergenic | 15.0% |
!! | ATTTATATTTATACAGAACA+AGG | - | chr6.4:3907323-3907342 | None:intergenic | 15.0% |
!! | CAATTATATATGTAAAGTAA+AGG | - | chr6.4:3906831-3906850 | None:intergenic | 15.0% |
!! | GAATATAGTTGTATTATATT+TGG | + | chr6.4:3907969-3907988 | MS.gene66975:intron | 15.0% |
!! | TTAATTTATCTATCATTACA+TGG | + | chr6.4:3909462-3909481 | MS.gene66975:intron | 15.0% |
!!! | GTATTGTTAAATTTTTTTGA+AGG | + | chr6.4:3909713-3909732 | MS.gene66975:intron | 15.0% |
!!! | GTTTATAATTGTTGTTTTAT+AGG | + | chr6.4:3904929-3904948 | MS.gene66975:intron | 15.0% |
!!! | TATAATTGTTATTTGACTTT+GGG | + | chr6.4:3907164-3907183 | MS.gene66975:intron | 15.0% |
!!! | TTATAATTGTTATTTGACTT+TGG | + | chr6.4:3907163-3907182 | MS.gene66975:intron | 15.0% |
!!! | TTGATTTTATTAATCTTTGA+AGG | + | chr6.4:3907407-3907426 | MS.gene66975:intron | 15.0% |
!! | AATTACATTATTGTAAGAAC+TGG | - | chr6.4:3906584-3906603 | None:intergenic | 20.0% |
!! | ACACTGAATACAAATAAAAA+AGG | - | chr6.4:3906807-3906826 | None:intergenic | 20.0% |
!! | AGAATTAGAAATGGAAAATT+CGG | + | chr6.4:3910395-3910414 | MS.gene66975:CDS | 20.0% |
!! | ATGAAATGTAATTACTACAA+TGG | + | chr6.4:3905103-3905122 | MS.gene66975:intron | 20.0% |
!! | ATTGTGAAAAATAAATCCTT+TGG | + | chr6.4:3906344-3906363 | MS.gene66975:intron | 20.0% |
!! | ATTTAAATCCAGTAAAAATC+TGG | - | chr6.4:3909550-3909569 | None:intergenic | 20.0% |
!! | ATTTAGACATGTAATATTGT+CGG | + | chr6.4:3909407-3909426 | MS.gene66975:intron | 20.0% |
!! | CACTGAATACAAATAAAAAA+GGG | - | chr6.4:3906806-3906825 | None:intergenic | 20.0% |
!! | CTTTGAATGATAAATTGAAA+TGG | - | chr6.4:3908197-3908216 | None:intergenic | 20.0% |
!! | GTGATAATAATTTCAGAAAA+TGG | + | chr6.4:3905552-3905571 | MS.gene66975:intron | 20.0% |
!! | TTAGGAATTATAGTATAACA+CGG | + | chr6.4:3908027-3908046 | MS.gene66975:intron | 20.0% |
!! | TTCACAGATTAATAAACATA+GGG | - | chr6.4:3908456-3908475 | None:intergenic | 20.0% |
!! | TTCTAGATTAGAATTAGAAA+TGG | + | chr6.4:3910386-3910405 | MS.gene66975:CDS | 20.0% |
!! | TTGTGAAAAATAAATCCTTT+GGG | + | chr6.4:3906345-3906364 | MS.gene66975:intron | 20.0% |
!! | TTTAAATCCAGTAAAAATCT+GGG | - | chr6.4:3909549-3909568 | None:intergenic | 20.0% |
!! | TTTCACAGATTAATAAACAT+AGG | - | chr6.4:3908457-3908476 | None:intergenic | 20.0% |
!!! | ATAGGACATAAATTTTGATT+AGG | + | chr6.4:3908009-3908028 | MS.gene66975:intron | 20.0% |
!!! | GGTTTCTAAAATTTATGAAT+AGG | - | chr6.4:3906704-3906723 | None:intergenic | 20.0% |
!!! | TATCTTGACATTTATTTTAC+AGG | + | chr6.4:3908872-3908891 | MS.gene66975:intron | 20.0% |
!!! | TTGTTGTTTTATAGGAAAAT+TGG | + | chr6.4:3904937-3904956 | MS.gene66975:intron | 20.0% |
!!! | TTTTGCATTTCAACATAAAT+AGG | - | chr6.4:3907747-3907766 | None:intergenic | 20.0% |
! | AATGACAAATTACATGAAAC+AGG | - | chr6.4:3907380-3907399 | None:intergenic | 25.0% |
! | AATGTCTGTAATATGTCTTT+CGG | - | chr6.4:3910297-3910316 | None:intergenic | 25.0% |
! | ACAAATAAAAAAGGGAATGA+AGG | - | chr6.4:3906798-3906817 | None:intergenic | 25.0% |
! | AGTATATGAATAACGTGAAA+AGG | - | chr6.4:3909438-3909457 | None:intergenic | 25.0% |
! | ATCAGAAATATGTGAATGTT+AGG | + | chr6.4:3908305-3908324 | MS.gene66975:intron | 25.0% |
! | ATTTATGAATAGGTCCTAAT+TGG | - | chr6.4:3906694-3906713 | None:intergenic | 25.0% |
! | CAAAAGTTTATCAAGTGTTA+TGG | + | chr6.4:3909572-3909591 | MS.gene66975:intron | 25.0% |
! | CATAGTTTCGAGAAAAAAAT+AGG | - | chr6.4:3908261-3908280 | None:intergenic | 25.0% |
! | CTTGACATCAAATAATCAAA+TGG | + | chr6.4:3909317-3909336 | MS.gene66975:intron | 25.0% |
! | GAAATCAATGTTATCAATAG+CGG | - | chr6.4:3906933-3906952 | None:intergenic | 25.0% |
! | TAAGCTATGATTTATGATCT+AGG | + | chr6.4:3907136-3907155 | MS.gene66975:intron | 25.0% |
! | TACTATTTATTCAAACCTGT+CGG | - | chr6.4:3905426-3905445 | None:intergenic | 25.0% |
! | TCAGAAATATGTGAATGTTA+GGG | + | chr6.4:3908306-3908325 | MS.gene66975:intron | 25.0% |
! | TCATAATTCCAATGTCTATT+GGG | - | chr6.4:3908688-3908707 | None:intergenic | 25.0% |
! | TGGAAAATATAGACAATACA+AGG | + | chr6.4:3910056-3910075 | MS.gene66975:CDS | 25.0% |
! | TGTGATAATTTCTTCTTTCA+GGG | - | chr6.4:3906561-3906580 | None:intergenic | 25.0% |
! | TGTTATTCAGTTACATTTGA+AGG | - | chr6.4:3908079-3908098 | None:intergenic | 25.0% |
! | TTACCAACTATATATACATG+TGG | + | chr6.4:3908804-3908823 | MS.gene66975:intron | 25.0% |
! | TTACCACATGTATATATAGT+TGG | - | chr6.4:3908810-3908829 | None:intergenic | 25.0% |
! | TTAGCATCTTGATTGAAATA+TGG | + | chr6.4:3909371-3909390 | MS.gene66975:intron | 25.0% |
! | TTATTTGATGTCAAGAACTT+AGG | - | chr6.4:3909312-3909331 | None:intergenic | 25.0% |
!! | ACTATGCTAGATCTTTTATA+AGG | + | chr6.4:3907867-3907886 | MS.gene66975:intron | 25.0% |
!! | AGATAAGAACTTTTACAACA+AGG | - | chr6.4:3906984-3907003 | None:intergenic | 25.0% |
!! | CATAACACTTGATAAACTTT+TGG | - | chr6.4:3909574-3909593 | None:intergenic | 25.0% |
!! | CTATGCTAGATCTTTTATAA+GGG | + | chr6.4:3907868-3907887 | MS.gene66975:intron | 25.0% |
!! | GATAAGAACTTTTACAACAA+GGG | - | chr6.4:3906983-3907002 | None:intergenic | 25.0% |
!! | TGAAAGGTATGAAATTTACT+CGG | + | chr6.4:3909160-3909179 | MS.gene66975:intron | 25.0% |
!!! | AAGGATTTTTTTTATCAGAC+AGG | + | chr6.4:3907540-3907559 | MS.gene66975:CDS | 25.0% |
!!! | AAGTTTTGAGATTTGGTTTT+TGG | + | chr6.4:3909632-3909651 | MS.gene66975:intron | 25.0% |
!!! | AGGATTTTTTTTATCAGACA+GGG | + | chr6.4:3907541-3907560 | MS.gene66975:CDS | 25.0% |
!!! | CATAAATTTTAGAAACCGAA+TGG | + | chr6.4:3906707-3906726 | MS.gene66975:intron | 25.0% |
!!! | GTTTCTGAGAGTTTATTTTA+AGG | + | chr6.4:3909686-3909705 | MS.gene66975:intron | 25.0% |
!!! | GTTTGTTTTTTTTGTGGATT+TGG | + | chr6.4:3904851-3904870 | MS.gene66975:intron | 25.0% |
!!! | TCTCTTTAAGTTTTGAGATT+TGG | + | chr6.4:3909625-3909644 | MS.gene66975:intron | 25.0% |
!!! | TTCATTTCCTTTTGAGATAT+GGG | + | chr6.4:3907647-3907666 | MS.gene66975:CDS | 25.0% |
!!! | TTTTTGTTGCTTTCAGTAAT+AGG | + | chr6.4:3904786-3904805 | MS.gene66975:CDS | 25.0% |
AAAGAACGAATGGTGAATTA+GGG | - | chr6.4:3904239-3904258 | None:intergenic | 30.0% | |
AACAAGATTAACTATGGTAG+AGG | + | chr6.4:3906405-3906424 | MS.gene66975:intron | 30.0% | |
AACAAGCATCATAAAACTTC+TGG | + | chr6.4:3908420-3908439 | MS.gene66975:intron | 30.0% | |
AAGTAAGCCTTCAATATAAG+TGG | + | chr6.4:3906520-3906539 | MS.gene66975:intron | 30.0% | |
AATATGCATGTTTGCCAATT+AGG | + | chr6.4:3906677-3906696 | MS.gene66975:intron | 30.0% | |
AATCCTTCATATTTCCAAGA+CGG | - | chr6.4:3907527-3907546 | None:intergenic | 30.0% | |
AATGAAAGTGAATGTGATAC+TGG | + | chr6.4:3904972-3904991 | MS.gene66975:intron | 30.0% | |
ACAATGCACACAATTGATAA+TGG | + | chr6.4:3906155-3906174 | MS.gene66975:intron | 30.0% | |
ACTGAGAGGTTTACATATTA+CGG | - | chr6.4:3906758-3906777 | None:intergenic | 30.0% | |
AGAAATATGTGAATGTTAGG+GGG | + | chr6.4:3908308-3908327 | MS.gene66975:intron | 30.0% | |
AGAGTATGAAATTGTGTAGT+TGG | + | chr6.4:3905161-3905180 | MS.gene66975:intron | 30.0% | |
AGATAAAACGAAGAAAGCTT+CGG | + | chr6.4:3904466-3904485 | MS.gene66975:CDS | 30.0% | |
AGTAAGCCTTCAATATAAGT+GGG | + | chr6.4:3906521-3906540 | MS.gene66975:intron | 30.0% | |
AGTAATACTCATTGACCATT+CGG | - | chr6.4:3906725-3906744 | None:intergenic | 30.0% | |
ATAGTTAATCTTGTTCGAGA+TGG | - | chr6.4:3906400-3906419 | None:intergenic | 30.0% | |
ATATGAATAACGTGAAAAGG+AGG | - | chr6.4:3909435-3909454 | None:intergenic | 30.0% | |
ATCATTCAAAGATCAGACAA+TGG | + | chr6.4:3909976-3909995 | MS.gene66975:CDS | 30.0% | |
ATCTCGAACAAGATTAACTA+TGG | + | chr6.4:3906399-3906418 | MS.gene66975:intron | 30.0% | |
ATGAAATAATTCAGCAGTCT+AGG | + | chr6.4:3908278-3908297 | MS.gene66975:intron | 30.0% | |
ATTAAGAAAATAAGTCCCAG+AGG | - | chr6.4:3906623-3906642 | None:intergenic | 30.0% | |
CAAAAATCTGCTATGTTAGA+TGG | - | chr6.4:3906905-3906924 | None:intergenic | 30.0% | |
CAATAGACATTGGAATTATG+AGG | + | chr6.4:3908687-3908706 | MS.gene66975:intron | 30.0% | |
CAGAAATATGTGAATGTTAG+GGG | + | chr6.4:3908307-3908326 | MS.gene66975:intron | 30.0% | |
CTATAATCCACAATCTTAGT+TGG | - | chr6.4:3909760-3909779 | None:intergenic | 30.0% | |
CTCATAATTCCAATGTCTAT+TGG | - | chr6.4:3908689-3908708 | None:intergenic | 30.0% | |
GACACTTCTAATATGAAAGT+AGG | + | chr6.4:3907068-3907087 | MS.gene66975:intron | 30.0% | |
GGTTAATGAAAACGATGAAT+GGG | - | chr6.4:3904293-3904312 | None:intergenic | 30.0% | |
GTAAAGATATGTTCCTTAGT+GGG | + | chr6.4:3906303-3906322 | MS.gene66975:intron | 30.0% | |
GTGTGAATCATAAAGTTGTA+TGG | - | chr6.4:3908963-3908982 | None:intergenic | 30.0% | |
GTGTGATAATTTCTTCTTTC+AGG | - | chr6.4:3906562-3906581 | None:intergenic | 30.0% | |
TAGTTAATCTTGTTCGAGAT+GGG | - | chr6.4:3906399-3906418 | None:intergenic | 30.0% | |
TATCTGGACATGACTTTAAT+TGG | + | chr6.4:3905634-3905653 | MS.gene66975:intron | 30.0% | |
TATTTGTGACATTCAACTTG+AGG | + | chr6.4:3907572-3907591 | MS.gene66975:CDS | 30.0% | |
TCAGAATTCAATTACCTCTT+TGG | - | chr6.4:3909797-3909816 | None:intergenic | 30.0% | |
TCGTATCACACATGATTTAA+AGG | + | chr6.4:3907797-3907816 | MS.gene66975:intron | 30.0% | |
TGAATCATAAAGTTGTATGG+CGG | - | chr6.4:3908960-3908979 | None:intergenic | 30.0% | |
TGAGTCTATCAAATATGTTC+AGG | + | chr6.4:3904829-3904848 | MS.gene66975:CDS | 30.0% | |
TGTAAAGATATGTTCCTTAG+TGG | + | chr6.4:3906302-3906321 | MS.gene66975:intron | 30.0% | |
TTTACCGAAAATCAACTGTT+TGG | + | chr6.4:3904420-3904439 | MS.gene66975:CDS | 30.0% | |
TTTAGACAATAACCTCCAAA+CGG | - | chr6.4:3908839-3908858 | None:intergenic | 30.0% | |
TTTATCAAGTGTTATGGCAT+TGG | + | chr6.4:3909578-3909597 | MS.gene66975:intron | 30.0% | |
TTTGGAGGTTATTGTCTAAA+AGG | + | chr6.4:3908839-3908858 | MS.gene66975:intron | 30.0% | |
! | AAAAGACATCTTTCTAAGAG+TGG | - | chr6.4:3908925-3908944 | None:intergenic | 30.0% |
! | AAGGAAAACAACTGTGATTT+TGG | + | chr6.4:3910020-3910039 | MS.gene66975:CDS | 30.0% |
! | AATCAACTGTTTGGAATGAA+TGG | + | chr6.4:3904429-3904448 | MS.gene66975:CDS | 30.0% |
! | AATGTAGTGAGGAGATTTTT+AGG | + | chr6.4:3904567-3904586 | MS.gene66975:CDS | 30.0% |
! | AATTAGGGTTGATTAACGAA+CGG | - | chr6.4:3904224-3904243 | None:intergenic | 30.0% |
! | ACGTTTTTGATAGACTCAAA+AGG | - | chr6.4:3905738-3905757 | None:intergenic | 30.0% |
! | AGGAAAACAACTGTGATTTT+GGG | + | chr6.4:3910021-3910040 | MS.gene66975:CDS | 30.0% |
! | ATCAACTGTTTGGAATGAAT+GGG | + | chr6.4:3904430-3904449 | MS.gene66975:CDS | 30.0% |
! | ATCTTCCTACTTCTTTTCAT+TGG | + | chr6.4:3907611-3907630 | MS.gene66975:CDS | 30.0% |
! | ATGTAGTGAGGAGATTTTTA+GGG | + | chr6.4:3904568-3904587 | MS.gene66975:CDS | 30.0% |
! | CATCTAACATAGCAGATTTT+TGG | + | chr6.4:3906903-3906922 | MS.gene66975:intron | 30.0% |
! | CTTGATTGAAATATGGACTA+TGG | + | chr6.4:3909378-3909397 | MS.gene66975:intron | 30.0% |
! | GAAACATTGTTTGGAACAAT+TGG | - | chr6.4:3907501-3907520 | None:intergenic | 30.0% |
! | GATTTTCGGTAAATTGGATT+TGG | - | chr6.4:3904413-3904432 | None:intergenic | 30.0% |
! | GGCATTGGAATTTAAATTCT+GGG | + | chr6.4:3909593-3909612 | MS.gene66975:intron | 30.0% |
! | TATATGTGTAAGTGTTGTGT+CGG | + | chr6.4:3905592-3905611 | MS.gene66975:intron | 30.0% |
! | TATGTGAGCTTGAATCTTTT+TGG | + | chr6.4:3907015-3907034 | MS.gene66975:intron | 30.0% |
! | TGAGATTTTTCTCTCTTGTT+TGG | + | chr6.4:3906026-3906045 | MS.gene66975:intron | 30.0% |
! | TGGCATTGGAATTTAAATTC+TGG | + | chr6.4:3909592-3909611 | MS.gene66975:intron | 30.0% |
! | TTTTTATCTGACCAGAGAAT+AGG | + | chr6.4:3905131-3905150 | MS.gene66975:intron | 30.0% |
!! | ACAGTTGATTTTCGGTAAAT+TGG | - | chr6.4:3904419-3904438 | None:intergenic | 30.0% |
!! | ACTTTAATTGGAAGTGTCAA+TGG | + | chr6.4:3905646-3905665 | MS.gene66975:intron | 30.0% |
!! | CATTCCAAACAGTTGATTTT+CGG | - | chr6.4:3904427-3904446 | None:intergenic | 30.0% |
!! | TTGAAGGTGTTTAAAAACCA+TGG | + | chr6.4:3907423-3907442 | MS.gene66975:intron | 30.0% |
!!! | CTATCTGTTTTGAAATTGTG+TGG | + | chr6.4:3905335-3905354 | MS.gene66975:intron | 30.0% |
!!! | CTTCATTTCCTTTTGAGATA+TGG | + | chr6.4:3907646-3907665 | MS.gene66975:CDS | 30.0% |
!!! | GTTCAGGTTTGTTTTTTTTG+TGG | + | chr6.4:3904845-3904864 | MS.gene66975:intron | 30.0% |
!!! | TAAATTTTTTTGAAGGCGCA+TGG | + | chr6.4:3909720-3909739 | MS.gene66975:intron | 30.0% |
!!! | TCTGAGAGTTTATTTTAAGG+TGG | + | chr6.4:3909689-3909708 | MS.gene66975:intron | 30.0% |
AAAAACCATGGTGAAAAAGC+TGG | + | chr6.4:3907435-3907454 | MS.gene66975:CDS | 35.0% | |
AAAGGAAATGAAGCAGCAAA+CGG | - | chr6.4:3907639-3907658 | None:intergenic | 35.0% | |
AACACAACATAACACAATCC+AGG | - | chr6.4:3908136-3908155 | None:intergenic | 35.0% | |
AAGAAAGCTTCGGACTTTAA+GGG | + | chr6.4:3904476-3904495 | MS.gene66975:CDS | 35.0% | |
AAGACTGGAACAAAGAAATG+TGG | + | chr6.4:3910093-3910112 | MS.gene66975:CDS | 35.0% | |
AAGATTAACTATGGTAGAGG+AGG | + | chr6.4:3906408-3906427 | MS.gene66975:intron | 35.0% | |
AAGTAATTGAAACTGCGATC+GGG | + | chr6.4:3910199-3910218 | MS.gene66975:CDS | 35.0% | |
ACAACCCTAATCTTCCAATT+CGG | - | chr6.4:3904608-3904627 | None:intergenic | 35.0% | |
ACATGGCAATAATTAGCAAG+AGG | + | chr6.4:3908628-3908647 | MS.gene66975:intron | 35.0% | |
AGACTGGAACAAAGAAATGT+GGG | + | chr6.4:3910094-3910113 | MS.gene66975:CDS | 35.0% | |
AGCATCATAAAACTTCTGGT+TGG | + | chr6.4:3908424-3908443 | MS.gene66975:intron | 35.0% | |
ATAACCCCCACTTATATTGA+AGG | - | chr6.4:3906530-3906549 | None:intergenic | 35.0% | |
ATAGATAAACCCTGTTAGGT+TGG | + | chr6.4:3905910-3905929 | MS.gene66975:intron | 35.0% | |
ATCACACAAACACTATGCAT+CGG | - | chr6.4:3906465-3906484 | None:intergenic | 35.0% | |
ATCCTTCATATTTCCAAGAC+GGG | - | chr6.4:3907526-3907545 | None:intergenic | 35.0% | |
ATGAACCGAATTGGAAGATT+AGG | + | chr6.4:3904600-3904619 | MS.gene66975:CDS | 35.0% | |
ATGTGGTAATTTCTTCCGTT+TGG | + | chr6.4:3908821-3908840 | MS.gene66975:intron | 35.0% | |
ATTCAAACCAGATACATTGC+CGG | - | chr6.4:3905304-3905323 | None:intergenic | 35.0% | |
ATTCAAAGATCAGACAATGG+CGG | + | chr6.4:3909979-3909998 | MS.gene66975:CDS | 35.0% | |
ATTTGGATCTTCTTCCTCAT+CGG | - | chr6.4:3904396-3904415 | None:intergenic | 35.0% | |
CAAGGGACACAAAATTTACA+AGG | - | chr6.4:3906966-3906985 | None:intergenic | 35.0% | |
CAGTAATAGGATCAGAGAAT+TGG | + | chr6.4:3904799-3904818 | MS.gene66975:CDS | 35.0% | |
CATTCTCATAGTCAAATCCT+GGG | + | chr6.4:3907471-3907490 | MS.gene66975:CDS | 35.0% | |
CCATGAATTGGATGATGAAA+TGG | + | chr6.4:3907698-3907717 | MS.gene66975:CDS | 35.0% | |
CCATTTCATCATCCAATTCA+TGG | - | chr6.4:3907701-3907720 | None:intergenic | 35.0% | |
CGTATAATACGAATCCTAGT+AGG | + | chr6.4:3904507-3904526 | MS.gene66975:CDS | 35.0% | |
CTCTCAAATGCACCTAAATA+GGG | - | chr6.4:3909279-3909298 | None:intergenic | 35.0% | |
CTTGATAGATAAACCCTGTT+AGG | + | chr6.4:3905906-3905925 | MS.gene66975:intron | 35.0% | |
GAAAGAACGAATGGTGAATT+AGG | - | chr6.4:3904240-3904259 | None:intergenic | 35.0% | |
GAAATGGTGTTTGAATGTCA+TGG | + | chr6.4:3907939-3907958 | MS.gene66975:intron | 35.0% | |
GAAGTAATTGAAACTGCGAT+CGG | + | chr6.4:3910198-3910217 | MS.gene66975:CDS | 35.0% | |
GAATTCAATTACCTCTTTGG+TGG | - | chr6.4:3909794-3909813 | None:intergenic | 35.0% | |
GAGTCTATCAAAAACGTTCA+AGG | + | chr6.4:3905741-3905760 | MS.gene66975:intron | 35.0% | |
GATATTAGTCCTTGTTCACT+TGG | + | chr6.4:3906050-3906069 | MS.gene66975:intron | 35.0% | |
GCAAAAAGGGGTGAAAATTA+GGG | - | chr6.4:3904367-3904386 | None:intergenic | 35.0% | |
GCACTTGATAAATAAACCCT+AGG | + | chr6.4:3905679-3905698 | MS.gene66975:intron | 35.0% | |
GGGTTAATGAAAACGATGAA+TGG | - | chr6.4:3904294-3904313 | None:intergenic | 35.0% | |
GTAAGCCTTCAATATAAGTG+GGG | + | chr6.4:3906522-3906541 | MS.gene66975:intron | 35.0% | |
GTTAGTTAAGTAAAGCCTCT+GGG | + | chr6.4:3906605-3906624 | MS.gene66975:intron | 35.0% | |
TAAGCCTTCAATATAAGTGG+GGG | + | chr6.4:3906523-3906542 | MS.gene66975:intron | 35.0% | |
TAATCCACAATCTTAGTTGG+AGG | - | chr6.4:3909757-3909776 | None:intergenic | 35.0% | |
TCATGAAGATGAATGTAGTG+AGG | + | chr6.4:3904556-3904575 | MS.gene66975:CDS | 35.0% | |
TCATTCTCATAGTCAAATCC+TGG | + | chr6.4:3907470-3907489 | MS.gene66975:CDS | 35.0% | |
TCGCAGTTTCAATTACTTCA+TGG | - | chr6.4:3910197-3910216 | None:intergenic | 35.0% | |
TCTCTCAAATGCACCTAAAT+AGG | - | chr6.4:3909280-3909299 | None:intergenic | 35.0% | |
TGAACCGAATTGGAAGATTA+GGG | + | chr6.4:3904601-3904620 | MS.gene66975:CDS | 35.0% | |
TGATGTTGTGATTGAAAGTC+CGG | + | chr6.4:3904715-3904734 | MS.gene66975:CDS | 35.0% | |
TGCAAAAAGGGGTGAAAATT+AGG | - | chr6.4:3904368-3904387 | None:intergenic | 35.0% | |
TGCATAAAAACTCTGAGCTT+TGG | + | chr6.4:3908572-3908591 | MS.gene66975:intron | 35.0% | |
TGTCCTATCCTGTATGATTA+AGG | - | chr6.4:3907997-3908016 | None:intergenic | 35.0% | |
TGTTAGTTAAGTAAAGCCTC+TGG | + | chr6.4:3906604-3906623 | MS.gene66975:intron | 35.0% | |
TTATGACTGTTGTCTTCTTC+TGG | + | chr6.4:3907352-3907371 | MS.gene66975:intron | 35.0% | |
TTCCAATTCGGTTCATCAAA+CGG | - | chr6.4:3904596-3904615 | None:intergenic | 35.0% | |
TTTACCTCCAACTAAGATTG+TGG | + | chr6.4:3909750-3909769 | MS.gene66975:CDS | 35.0% | |
! | ATGAAATTGTGTAGTTGGTG+TGG | + | chr6.4:3905166-3905185 | MS.gene66975:intron | 35.0% |
! | ATTTTACAGGCACTTGATCT+TGG | + | chr6.4:3908885-3908904 | MS.gene66975:intron | 35.0% |
! | CAAGACTGTGATGCATTTTA+TGG | - | chr6.4:3908230-3908249 | None:intergenic | 35.0% |
! | CAGCAGACAAGTTTGAAATT+AGG | - | chr6.4:3909189-3909208 | None:intergenic | 35.0% |
! | GCATCATAAAACTTCTGGTT+GGG | + | chr6.4:3908425-3908444 | MS.gene66975:intron | 35.0% |
! | TAATTTTCACCCCTTTTTGC+AGG | + | chr6.4:3904367-3904386 | MS.gene66975:intron | 35.0% |
! | TTGAGCTATAGACACAGTTT+TGG | + | chr6.4:3908758-3908777 | MS.gene66975:intron | 35.0% |
! | TTTGAAATTGTGTGGTTGGT+GGG | + | chr6.4:3905343-3905362 | MS.gene66975:intron | 35.0% |
!! | ATTTGGTGCCTTAATCATAC+AGG | + | chr6.4:3907986-3908005 | MS.gene66975:intron | 35.0% |
!! | CACAATTGATAATGGATGTG+TGG | + | chr6.4:3906163-3906182 | MS.gene66975:intron | 35.0% |
!! | GTAGTCGAACTTTTTCTAGT+TGG | + | chr6.4:3906213-3906232 | MS.gene66975:intron | 35.0% |
!! | TAATGGATGTGTGGTCATTT+TGG | + | chr6.4:3906172-3906191 | MS.gene66975:intron | 35.0% |
!! | TTTTGAGGAGTTTGGATGAT+GGG | + | chr6.4:3904648-3904667 | MS.gene66975:CDS | 35.0% |
!!! | ATCTAGAACGTTTTAGCTGT+TGG | - | chr6.4:3910374-3910393 | None:intergenic | 35.0% |
!!! | ATGTGTGGTCATTTTGGAAT+AGG | + | chr6.4:3906178-3906197 | MS.gene66975:intron | 35.0% |
!!! | CTGTTTTGAAATTGTGTGGT+TGG | + | chr6.4:3905339-3905358 | MS.gene66975:intron | 35.0% |
!!! | GAATCTTTTTGGCTGCTTTA+CGG | + | chr6.4:3907026-3907045 | MS.gene66975:intron | 35.0% |
!!! | TTTTGAAATTGTGTGGTTGG+TGG | + | chr6.4:3905342-3905361 | MS.gene66975:intron | 35.0% |
AAACCAAATACCTCCCACTA+AGG | - | chr6.4:3906319-3906338 | None:intergenic | 40.0% | |
AAGATATGTTCCTTAGTGGG+AGG | + | chr6.4:3906306-3906325 | MS.gene66975:intron | 40.0% | |
AAGGGGTGAAAATTAGGGTT+AGG | - | chr6.4:3904362-3904381 | None:intergenic | 40.0% | |
AATCCAGGTTTACCACACAA+AGG | - | chr6.4:3908121-3908140 | None:intergenic | 40.0% | |
ACAGATGCAACAGCTGAATT+TGG | + | chr6.4:3908516-3908535 | MS.gene66975:intron | 40.0% | |
ACCATTCGTTCTTTCAACAC+TGG | + | chr6.4:3904245-3904264 | MS.gene66975:CDS | 40.0% | |
AGAAAGCTTCGGACTTTAAG+GGG | + | chr6.4:3904477-3904496 | MS.gene66975:CDS | 40.0% | |
AGACCTGTTAGAAATGGTGA+TGG | + | chr6.4:3910138-3910157 | MS.gene66975:CDS | 40.0% | |
AGAGGAAGACCTGTTAGAAA+TGG | + | chr6.4:3910132-3910151 | MS.gene66975:CDS | 40.0% | |
AGCATGTTGGATATGCAAGT+AGG | + | chr6.4:3905942-3905961 | MS.gene66975:intron | 40.0% | |
AGGATGTATAGGGATACAAG+TGG | + | chr6.4:3906428-3906447 | MS.gene66975:intron | 40.0% | |
AGGGGTGAAAATTAGGGTTA+GGG | - | chr6.4:3904361-3904380 | None:intergenic | 40.0% | |
ATACAGAACAAGGCAAGACT+AGG | - | chr6.4:3907313-3907332 | None:intergenic | 40.0% | |
ATAGTGTTGCCAGCAAATAG+CGG | - | chr6.4:3906879-3906898 | None:intergenic | 40.0% | |
ATGCAAGTAGGAAGAATGTG+CGG | + | chr6.4:3905954-3905973 | MS.gene66975:intron | 40.0% | |
ATGGCTAGACATCAATCCTA+AGG | - | chr6.4:3905989-3906008 | None:intergenic | 40.0% | |
ATGGTAGAGGAGGATGTATA+GGG | + | chr6.4:3906418-3906437 | MS.gene66975:intron | 40.0% | |
CACTACTCTCACATTACCTA+TGG | - | chr6.4:3906008-3906027 | None:intergenic | 40.0% | |
CAGATACATTGTCAATGTCG+CGG | - | chr6.4:3905044-3905063 | None:intergenic | 40.0% | |
CATCCATCACCATTTCTAAC+AGG | - | chr6.4:3910144-3910163 | None:intergenic | 40.0% | |
CATTACATGGATACGAGAAG+AGG | + | chr6.4:3909475-3909494 | MS.gene66975:intron | 40.0% | |
CGGAACCAATGAAAAGAAGT+AGG | - | chr6.4:3907619-3907638 | None:intergenic | 40.0% | |
CTCTCAAATCACCTATTCTC+TGG | - | chr6.4:3905145-3905164 | None:intergenic | 40.0% | |
CTGTATGCGATGGACATTTA+GGG | + | chr6.4:3908662-3908681 | MS.gene66975:intron | 40.0% | |
CTTTACGGCTGTGTTTGTAT+GGG | + | chr6.4:3907041-3907060 | MS.gene66975:intron | 40.0% | |
GAAGAAAGCTTCGGACTTTA+AGG | + | chr6.4:3904475-3904494 | MS.gene66975:CDS | 40.0% | |
GATTGAAGAAGAGGATAGGA+AGG | + | chr6.4:3910001-3910020 | MS.gene66975:CDS | 40.0% | |
GGAACAACCCATATCTCAAA+AGG | - | chr6.4:3907657-3907676 | None:intergenic | 40.0% | |
GTGAGACTAAGTCCCTATTT+AGG | + | chr6.4:3909264-3909283 | MS.gene66975:intron | 40.0% | |
GTGCCTTAATCATACAGGAT+AGG | + | chr6.4:3907991-3908010 | MS.gene66975:intron | 40.0% | |
TAACAGGTGAACTCAGAACA+TGG | + | chr6.4:3908611-3908630 | MS.gene66975:intron | 40.0% | |
TACCTTTCATGTGCAAACAC+AGG | - | chr6.4:3909149-3909168 | None:intergenic | 40.0% | |
TAGGATTGATGTCTAGCCAT+AGG | + | chr6.4:3905989-3906008 | MS.gene66975:intron | 40.0% | |
TATATGTGTCAGTGTCGTGT+TGG | + | chr6.4:3905814-3905833 | MS.gene66975:intron | 40.0% | |
TATGGTAGAGGAGGATGTAT+AGG | + | chr6.4:3906417-3906436 | MS.gene66975:intron | 40.0% | |
TCACACAAACACTATGCATC+GGG | - | chr6.4:3906464-3906483 | None:intergenic | 40.0% | |
TCAGTTGTTAGTATCGTGTC+TGG | - | chr6.4:3905021-3905040 | None:intergenic | 40.0% | |
TCTGTTGCTCAAACAACCTA+GGG | - | chr6.4:3905698-3905717 | None:intergenic | 40.0% | |
TGACCAATGCAATACACACA+CGG | - | chr6.4:3904539-3904558 | None:intergenic | 40.0% | |
TGGCTTAGTGGAACTATTCT+AGG | + | chr6.4:3906085-3906104 | MS.gene66975:intron | 40.0% | |
TGGTAATTTCTTCCGTTTGG+AGG | + | chr6.4:3908824-3908843 | MS.gene66975:intron | 40.0% | |
TGTCAATATCCTGTATGCGA+TGG | + | chr6.4:3908652-3908671 | MS.gene66975:intron | 40.0% | |
TTCCGTTTGATGAACCGAAT+TGG | + | chr6.4:3904591-3904610 | MS.gene66975:CDS | 40.0% | |
TTCCTGTGTTTGCACATGAA+AGG | + | chr6.4:3909144-3909163 | MS.gene66975:CDS | 40.0% | |
TTCTGTTGCTCAAACAACCT+AGG | - | chr6.4:3905699-3905718 | None:intergenic | 40.0% | |
TTTACGGCTGTGTTTGTATG+GGG | + | chr6.4:3907042-3907061 | MS.gene66975:intron | 40.0% | |
! | AAATAGCGGAAGCTACAAAG+TGG | - | chr6.4:3906865-3906884 | None:intergenic | 40.0% |
! | ACCAGTGTTGAAAGAACGAA+TGG | - | chr6.4:3904249-3904268 | None:intergenic | 40.0% |
! | ATTTAGGGCCCAATAGACAT+TGG | + | chr6.4:3908677-3908696 | MS.gene66975:intron | 40.0% |
! | CGGATCTAATCTGAAGTATC+TGG | + | chr6.4:3905618-3905637 | MS.gene66975:intron | 40.0% |
! | GTTTTTATGCAGTTCCAGTC+AGG | - | chr6.4:3908563-3908582 | None:intergenic | 40.0% |
! | TTGAAATTGTGTGGTTGGTG+GGG | + | chr6.4:3905344-3905363 | MS.gene66975:intron | 40.0% |
! | TTGAAATTGTGTGGTTGGTG+TGG | + | chr6.4:3905344-3905363 | MS.gene66975:intron | 40.0% |
!! | CTGTTAGAAATGGTGATGGA+TGG | + | chr6.4:3910142-3910161 | MS.gene66975:CDS | 40.0% |
!! | GTGATTGTTTTGCATCTCGA+AGG | + | chr6.4:3906480-3906499 | MS.gene66975:intron | 40.0% |
!! | TCATCGGTTTCCTGCAAAAA+GGG | - | chr6.4:3904380-3904399 | None:intergenic | 40.0% |
!! | TCGAGAGTATCTGCTGAATT+GGG | + | chr6.4:3909918-3909937 | MS.gene66975:CDS | 40.0% |
!! | TTGGTAGCCCAGATTTTTAC+TGG | + | chr6.4:3909539-3909558 | MS.gene66975:intron | 40.0% |
!! | TTTGGATGATGGGTTTGTGT+TGG | + | chr6.4:3904658-3904677 | MS.gene66975:CDS | 40.0% |
!!! | ATTTTGGGTTGCGAAAGAAG+TGG | + | chr6.4:3910036-3910055 | MS.gene66975:CDS | 40.0% |
!!! | ATTTTTTTGAAGGCGCATGG+TGG | + | chr6.4:3909723-3909742 | MS.gene66975:intron | 40.0% |
!!! | GTTTTGAGGAGTTTGGATGA+TGG | + | chr6.4:3904647-3904666 | MS.gene66975:CDS | 40.0% |
!!! | TTTTTTTGAAGGCGCATGGT+GGG | + | chr6.4:3909724-3909743 | MS.gene66975:intron | 40.0% |
AAAACCTCGCCAACATCCTT+CGG | - | chr6.4:3904770-3904789 | None:intergenic | 45.0% | |
AAGCCGTGTGTGTATTGCAT+TGG | + | chr6.4:3904533-3904552 | MS.gene66975:CDS | 45.0% | |
AAGTGGCGAAGAGAAGTCTT+TGG | + | chr6.4:3910242-3910261 | MS.gene66975:CDS | 45.0% | |
ACACACGGCTTATTCCTACT+AGG | - | chr6.4:3904524-3904543 | None:intergenic | 45.0% | |
ACCTTGTTGCTGAGTGCTTA+AGG | - | chr6.4:3906247-3906266 | None:intergenic | 45.0% | |
ACTTCCTACTTTCAGCAGCA+TGG | - | chr6.4:3906283-3906302 | None:intergenic | 45.0% | |
AGAACAAGCTGTGGTGTAAC+AGG | + | chr6.4:3908595-3908614 | MS.gene66975:intron | 45.0% | |
AGAATCTTTGCAGCATCCTC+AGG | - | chr6.4:3909110-3909129 | None:intergenic | 45.0% | |
AGACGGGCAGAAACATTGTT+TGG | - | chr6.4:3907510-3907529 | None:intergenic | 45.0% | |
AGTATCGTGTCTATCGTGTC+TGG | - | chr6.4:3905271-3905290 | None:intergenic | 45.0% | |
ATGAGAACCAAAACCGTTGG+TGG | + | chr6.4:3904192-3904211 | MS.gene66975:CDS | 45.0% | |
ATTCACACTAGTCCATTGCG+TGG | + | chr6.4:3908975-3908994 | MS.gene66975:CDS | 45.0% | |
CATTGCATGCCAAGTGAACA+AGG | - | chr6.4:3906062-3906081 | None:intergenic | 45.0% | |
CCAAGCTCAAAACCAGTTGT+CGG | - | chr6.4:3909059-3909078 | None:intergenic | 45.0% | |
CCTAAATGTCCATCGCATAC+AGG | - | chr6.4:3908664-3908683 | None:intergenic | 45.0% | |
CCTGTATGCGATGGACATTT+AGG | + | chr6.4:3908661-3908680 | MS.gene66975:intron | 45.0% | |
CTCTGCACACTTCCATGAAT+TGG | + | chr6.4:3907686-3907705 | MS.gene66975:CDS | 45.0% | |
GAGTCAAGCCTAGACATTGT+TGG | + | chr6.4:3909520-3909539 | MS.gene66975:intron | 45.0% | |
GATGCAACAGCTGAATTTGG+TGG | + | chr6.4:3908519-3908538 | MS.gene66975:intron | 45.0% | |
GATTGAAAGTCCGGTGCATT+CGG | + | chr6.4:3904724-3904743 | MS.gene66975:CDS | 45.0% | |
GCTTTACGGCTGTGTTTGTA+TGG | + | chr6.4:3907040-3907059 | MS.gene66975:intron | 45.0% | |
GGCACGTGACAATTAGAACT+TGG | - | chr6.4:3908058-3908077 | None:intergenic | 45.0% | |
GTCACTATCAGTATCGTGTC+TGG | - | chr6.4:3905280-3905299 | None:intergenic | 45.0% | |
GTGACTCTTTGTGTCAGCTT+AGG | + | chr6.4:3909237-3909256 | MS.gene66975:intron | 45.0% | |
GTGTGCATTGTTCGTCCTTA+AGG | - | chr6.4:3906146-3906165 | None:intergenic | 45.0% | |
GTTAGTATCGTGTCTGGTGT+CGG | - | chr6.4:3905015-3905034 | None:intergenic | 45.0% | |
GTTCCAGTCAGGTCATCTAA+CGG | - | chr6.4:3908552-3908571 | None:intergenic | 45.0% | |
TAACAGGTCTTCCTCTCAGT+CGG | - | chr6.4:3910128-3910147 | None:intergenic | 45.0% | |
TAAGCACTCAGCAACAAGGT+CGG | + | chr6.4:3906247-3906266 | MS.gene66975:intron | 45.0% | |
TAATATCACCCCATCGTGTC+TGG | - | chr6.4:3905224-3905243 | None:intergenic | 45.0% | |
TCCACTCTACCAACCTAACA+GGG | - | chr6.4:3905922-3905941 | None:intergenic | 45.0% | |
TCCTTAAGCACTCAGCAACA+AGG | + | chr6.4:3906243-3906262 | MS.gene66975:intron | 45.0% | |
TGATGCATTCACCACCAAAG+AGG | + | chr6.4:3909780-3909799 | MS.gene66975:CDS | 45.0% | |
TGCCCGTCTTGGAAATATGA+AGG | + | chr6.4:3907521-3907540 | MS.gene66975:CDS | 45.0% | |
TGCGACACTGACAATGTAGA+TGG | + | chr6.4:3905530-3905549 | MS.gene66975:intron | 45.0% | |
TGGAAAGTGAACGTAGTGTG+TGG | + | chr6.4:3910162-3910181 | MS.gene66975:CDS | 45.0% | |
TGTTCACTTGGCATGCAATG+AGG | + | chr6.4:3906062-3906081 | MS.gene66975:intron | 45.0% | |
TTACAGGCACTTGATCTTGG+AGG | + | chr6.4:3908888-3908907 | MS.gene66975:intron | 45.0% | |
TTCACACATCTGCCTTTGTG+TGG | + | chr6.4:3908106-3908125 | MS.gene66975:intron | 45.0% | |
TTCAGCAGATACTCTCGAGT+AGG | - | chr6.4:3909916-3909935 | None:intergenic | 45.0% | |
TTCCACTCTACCAACCTAAC+AGG | - | chr6.4:3905923-3905942 | None:intergenic | 45.0% | |
TTGTAGCTTCCGCTATTTGC+TGG | + | chr6.4:3906867-3906886 | MS.gene66975:intron | 45.0% | |
! | AACAATGTTTCTGCCCGTCT+TGG | + | chr6.4:3907510-3907529 | MS.gene66975:CDS | 45.0% |
! | ATACTGATAGTGACACCGAC+AGG | + | chr6.4:3905408-3905427 | MS.gene66975:intron | 45.0% |
! | CACGATACTGATAGTGACAC+CGG | + | chr6.4:3905282-3905301 | MS.gene66975:intron | 45.0% |
! | CATCAATCCTGTTTTGCCTG+AGG | + | chr6.4:3909091-3909110 | MS.gene66975:CDS | 45.0% |
! | CTTTTTGCAGGAAACCGATG+AGG | + | chr6.4:3904379-3904398 | MS.gene66975:intron | 45.0% |
! | GATAGTGGCTAAGAGCATGA+TGG | + | chr6.4:3908349-3908368 | MS.gene66975:intron | 45.0% |
! | GTGCTTCACATCACTGACTA+TGG | + | chr6.4:3907225-3907244 | MS.gene66975:intron | 45.0% |
! | TCAGTGTCGTGTTGGTGTTT+GGG | + | chr6.4:3905822-3905841 | MS.gene66975:intron | 45.0% |
! | TGTAAGTGTTGTGTCGGTGT+CGG | + | chr6.4:3905598-3905617 | MS.gene66975:intron | 45.0% |
! | TTGAGATATGGGTTGTTCCC+CGG | + | chr6.4:3907658-3907677 | MS.gene66975:CDS | 45.0% |
! | TTGGTAGAGTGGAAGCATGT+TGG | + | chr6.4:3905929-3905948 | MS.gene66975:intron | 45.0% |
!! | ACAATGGCGGATTGAAGAAG+AGG | + | chr6.4:3909992-3910011 | MS.gene66975:CDS | 45.0% |
!! | CATCGGTTTCCTGCAAAAAG+GGG | - | chr6.4:3904379-3904398 | None:intergenic | 45.0% |
!! | CTCATCGGTTTCCTGCAAAA+AGG | - | chr6.4:3904381-3904400 | None:intergenic | 45.0% |
!! | CTCGAGAGTATCTGCTGAAT+TGG | + | chr6.4:3909917-3909936 | MS.gene66975:CDS | 45.0% |
!! | GATGATGGGTTTGTGTTGGA+TGG | + | chr6.4:3904662-3904681 | MS.gene66975:CDS | 45.0% |
!! | GTTCCTTAGTGGGAGGTATT+TGG | + | chr6.4:3906313-3906332 | MS.gene66975:intron | 45.0% |
!!! | ACTGGTTTTGAGCTTGGAAC+TGG | + | chr6.4:3909062-3909081 | MS.gene66975:CDS | 45.0% |
!!! | CTGGTTTTGAGCTTGGAACT+GGG | + | chr6.4:3909063-3909082 | MS.gene66975:CDS | 45.0% |
!!! | GAATGGGAGTGTCGTTTTGA+AGG | - | chr6.4:3904277-3904296 | None:intergenic | 45.0% |
!!! | GTGAGGTTTTGGATGGGTTT+GGG | + | chr6.4:3904687-3904706 | MS.gene66975:CDS | 45.0% |
!! | AAAAAATTGAAAAAAAAATT+AGG | - | chr6.4:3904315-3904334 | None:intergenic | 5.0% |
!! | AAAAATTGAAAAAAAAATTA+GGG | - | chr6.4:3904314-3904333 | None:intergenic | 5.0% |
!!! | ATAGAAATTTTAAATTTTTA+GGG | + | chr6.4:3904907-3904926 | MS.gene66975:intron | 5.0% |
!!! | TATAGAAATTTTAAATTTTT+AGG | + | chr6.4:3904906-3904925 | MS.gene66975:intron | 5.0% |
!!! | TTCTATTAATTTTTATTTTT+AGG | + | chr6.4:3909885-3909904 | MS.gene66975:intron | 5.0% |
AACAACTGCTCCGAATGCAC+CGG | - | chr6.4:3904737-3904756 | None:intergenic | 50.0% | |
AAGTGTGCAGAGTGATACCG+GGG | - | chr6.4:3907678-3907697 | None:intergenic | 50.0% | |
ACTAGTCCATTGCGTGGTGA+TGG | + | chr6.4:3908981-3909000 | MS.gene66975:CDS | 50.0% | |
AGCACAGTGAGTCGTGATAG+TGG | + | chr6.4:3908334-3908353 | MS.gene66975:intron | 50.0% | |
AGCGTGGCTCAATTACTGAG+AGG | - | chr6.4:3906772-3906791 | None:intergenic | 50.0% | |
AGTAGGAAGAATGTGCGGAG+TGG | + | chr6.4:3905959-3905978 | MS.gene66975:intron | 50.0% | |
AGTCCGTTAGATGACCTGAC+TGG | + | chr6.4:3908546-3908565 | MS.gene66975:intron | 50.0% | |
AGTGACACCGGCAATGTATC+TGG | + | chr6.4:3905294-3905313 | MS.gene66975:intron | 50.0% | |
CAAGGCTTGACATCACCCAA+AGG | - | chr6.4:3906363-3906382 | None:intergenic | 50.0% | |
CAGAGCTGGCATACAGTCAT+TGG | + | chr6.4:3909006-3909025 | MS.gene66975:CDS | 50.0% | |
CATGCAATGAGGTGGCTTAG+TGG | + | chr6.4:3906073-3906092 | MS.gene66975:intron | 50.0% | |
CTAGTCCATTGCGTGGTGAT+GGG | + | chr6.4:3908982-3909001 | MS.gene66975:CDS | 50.0% | |
CTGCCTTTGTGTGGTAAACC+TGG | + | chr6.4:3908115-3908134 | MS.gene66975:intron | 50.0% | |
CTGGGCTACCAACAATGTCT+AGG | - | chr6.4:3909531-3909550 | None:intergenic | 50.0% | |
GAAGTGTGCAGAGTGATACC+GGG | - | chr6.4:3907679-3907698 | None:intergenic | 50.0% | |
GATGCATTAGCTCGCAAGAC+TGG | + | chr6.4:3910078-3910097 | MS.gene66975:CDS | 50.0% | |
GATTTGACGCCGAAGGATGT+TGG | + | chr6.4:3904758-3904777 | MS.gene66975:CDS | 50.0% | |
GCTTCCTTGTTGCTGCCTTA+AGG | + | chr6.4:3906128-3906147 | MS.gene66975:intron | 50.0% | |
GGAACCATGCTGCTGAAAGT+AGG | + | chr6.4:3906276-3906295 | MS.gene66975:intron | 50.0% | |
GGTTGTTGAGAGTCCGAATC+CGG | + | chr6.4:3904622-3904641 | MS.gene66975:CDS | 50.0% | |
GTGTCTATCGTGTCTGGTGT+CGG | - | chr6.4:3905265-3905284 | None:intergenic | 50.0% | |
GTTGTTGGATTTGACGCCGA+AGG | + | chr6.4:3904751-3904770 | MS.gene66975:CDS | 50.0% | |
TCACTTGGCATGCAATGAGG+TGG | + | chr6.4:3906065-3906084 | MS.gene66975:intron | 50.0% | |
TCCAAACTCCTCAAAACCGC+CGG | - | chr6.4:3904644-3904663 | None:intergenic | 50.0% | |
TCGTCCTTAAGGCAGCAACA+AGG | - | chr6.4:3906135-3906154 | None:intergenic | 50.0% | |
TGAATTGGGCACGAGCCATT+GGG | + | chr6.4:3909932-3909951 | MS.gene66975:CDS | 50.0% | |
TGTGCGGAGTGGTATACCTT+AGG | + | chr6.4:3905970-3905989 | MS.gene66975:intron | 50.0% | |
TTGGAACAATTGGCAAGCCC+AGG | - | chr6.4:3907491-3907510 | None:intergenic | 50.0% | |
! | GATGGGTTTGTGTTGGATGG+CGG | + | chr6.4:3904665-3904684 | MS.gene66975:CDS | 50.0% |
! | GGAAGTGTGCAGAGTGATAC+CGG | - | chr6.4:3907680-3907699 | None:intergenic | 50.0% |
! | GTCAGTGTCGTGTTGGTGTT+TGG | + | chr6.4:3905821-3905840 | MS.gene66975:intron | 50.0% |
! | TCGTGTTGGTGTTTGGGCAT+TGG | + | chr6.4:3905828-3905847 | MS.gene66975:intron | 50.0% |
! | TGTCTGGTGTCAGTGCTTCA+TGG | - | chr6.4:3905208-3905227 | None:intergenic | 50.0% |
!! | ACCCTGTTAGGTTGGTAGAG+TGG | + | chr6.4:3905918-3905937 | MS.gene66975:intron | 50.0% |
!! | GAGCTTTGGAGAACAAGCTG+TGG | + | chr6.4:3908586-3908605 | MS.gene66975:intron | 50.0% |
!! | GGCGGATTGAAGAAGAGGAT+AGG | + | chr6.4:3909997-3910016 | MS.gene66975:CDS | 50.0% |
!!! | ATGGCGGTGAGGTTTTGGAT+GGG | + | chr6.4:3904681-3904700 | MS.gene66975:CDS | 50.0% |
!!! | CCGACAACTGGTTTTGAGCT+TGG | + | chr6.4:3909056-3909075 | MS.gene66975:CDS | 50.0% |
!!! | CTGCACCAGCTTTTTCACCA+TGG | - | chr6.4:3907443-3907462 | None:intergenic | 50.0% |
!!! | GGTGAGGTTTTGGATGGGTT+TGG | + | chr6.4:3904686-3904705 | MS.gene66975:CDS | 50.0% |
AAACCCGTGCTCTCTCCCAA+TGG | - | chr6.4:3909950-3909969 | None:intergenic | 55.0% | |
AAGGGAATGAAGGCAGAGCG+TGG | - | chr6.4:3906788-3906807 | None:intergenic | 55.0% | |
ACATATGCCGGTCGGCTAAG+TGG | + | chr6.4:3910225-3910244 | MS.gene66975:CDS | 55.0% | |
CACTGACACCAGACACGATG+GGG | + | chr6.4:3905213-3905232 | MS.gene66975:intron | 55.0% | |
CCAGTTGTCGGAATCAGCTG+AGG | - | chr6.4:3909047-3909066 | None:intergenic | 55.0% | |
CTCCTCAAAACCGCCGGATT+CGG | - | chr6.4:3904638-3904657 | None:intergenic | 55.0% | |
CTGAATTGGGCACGAGCCAT+TGG | + | chr6.4:3909931-3909950 | MS.gene66975:CDS | 55.0% | |
GCAGCATCCTCAGGCAAAAC+AGG | - | chr6.4:3909101-3909120 | None:intergenic | 55.0% | |
GGTCTTCCTCTCAGTCGGAA+TGG | - | chr6.4:3910123-3910142 | None:intergenic | 55.0% | |
GGTGCATTCGGAGCAGTTGT+TGG | + | chr6.4:3904736-3904755 | MS.gene66975:CDS | 55.0% | |
TCTGACCCATCACCACGCAA+TGG | - | chr6.4:3908990-3909009 | None:intergenic | 55.0% | |
TGTTGAGAGTCCGAATCCGG+CGG | + | chr6.4:3904625-3904644 | MS.gene66975:CDS | 55.0% | |
! | ATGGGCTGAGCTGAGCAACA+AGG | - | chr6.4:3906381-3906400 | None:intergenic | 55.0% |
! | CAGCAACAAGGTCGGCTTAG+TGG | + | chr6.4:3906255-3906274 | MS.gene66975:intron | 55.0% |
! | CCTCAGCTGATTCCGACAAC+TGG | + | chr6.4:3909044-3909063 | MS.gene66975:CDS | 55.0% |
! | GCACTGACACCAGACACGAT+GGG | + | chr6.4:3905212-3905231 | MS.gene66975:intron | 55.0% |
! | GCGTTTGCCACCAACGGTTT+TGG | - | chr6.4:3904202-3904221 | None:intergenic | 55.0% |
! | GTTTGTGTTGGATGGCGGTG+AGG | + | chr6.4:3904670-3904689 | MS.gene66975:CDS | 55.0% |
!! | AGCACTGACACCAGACACGA+TGG | + | chr6.4:3905211-3905230 | MS.gene66975:intron | 55.0% |
!! | GTTGGATGGCGGTGAGGTTT+TGG | + | chr6.4:3904676-3904695 | MS.gene66975:CDS | 55.0% |
!!! | GATGGCGGTGAGGTTTTGGA+TGG | + | chr6.4:3904680-3904699 | MS.gene66975:CDS | 55.0% |
!!! | TCCGGCGGTTTTGAGGAGTT+TGG | + | chr6.4:3904640-3904659 | MS.gene66975:CDS | 55.0% |
CGAACGGCGTTTGCCACCAA+CGG | - | chr6.4:3904208-3904227 | None:intergenic | 60.0% | |
CGAGCCATTGGGAGAGAGCA+CGG | + | chr6.4:3909943-3909962 | MS.gene66975:CDS | 60.0% | |
CTCTTCGCCACTTAGCCGAC+CGG | - | chr6.4:3910235-3910254 | None:intergenic | 60.0% | |
GGGTGTCCATTCCGACTGAG+AGG | + | chr6.4:3910114-3910133 | MS.gene66975:CDS | 60.0% | |
! | GAGCCATTGGGAGAGAGCAC+GGG | + | chr6.4:3909944-3909963 | MS.gene66975:CDS | 60.0% |
! | GCGATCGGGAGCACATATGC+CGG | + | chr6.4:3910213-3910232 | MS.gene66975:CDS | 60.0% |
! | GTCCGAATCCGGCGGTTTTG+AGG | + | chr6.4:3904633-3904652 | MS.gene66975:CDS | 60.0% |
! | TCGGGAGCACATATGCCGGT+CGG | + | chr6.4:3910217-3910236 | MS.gene66975:CDS | 60.0% |
!! | GTTTGGGCATTGGCACGCGT+CGG | + | chr6.4:3905838-3905857 | MS.gene66975:intron | 60.0% |
CATTGGCACGCGTCGGAGTC+TGG | + | chr6.4:3905845-3905864 | MS.gene66975:intron | 65.0% | |
GACGCCGAAGGATGTTGGCG+AGG | + | chr6.4:3904763-3904782 | MS.gene66975:CDS | 65.0% | |
!! | GCGTGGTGATGGGTCAGAGC+TGG | + | chr6.4:3908992-3909011 | MS.gene66975:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 3904192 | 3910422 | 3904192 | ID=MS.gene66975 |
chr6.4 | mRNA | 3904192 | 3910422 | 3904192 | ID=MS.gene66975.t1;Parent=MS.gene66975 |
chr6.4 | exon | 3904192 | 3904266 | 3904192 | ID=MS.gene66975.t1.exon1;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3904192 | 3904266 | 3904192 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
chr6.4 | exon | 3904389 | 3904850 | 3904389 | ID=MS.gene66975.t1.exon2;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3904389 | 3904850 | 3904389 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
chr6.4 | exon | 3907429 | 3907719 | 3907429 | ID=MS.gene66975.t1.exon3;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3907429 | 3907719 | 3907429 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
chr6.4 | exon | 3908894 | 3909165 | 3908894 | ID=MS.gene66975.t1.exon4;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3908894 | 3909165 | 3908894 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
chr6.4 | exon | 3909735 | 3909801 | 3909735 | ID=MS.gene66975.t1.exon5;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3909735 | 3909801 | 3909735 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
chr6.4 | exon | 3909907 | 3910422 | 3909907 | ID=MS.gene66975.t1.exon6;Parent=MS.gene66975.t1 |
chr6.4 | CDS | 3909907 | 3910422 | 3909907 | ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1 |
Gene Sequence |
Protein sequence |