AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66975


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66975.t1 MTR_6g029530 99.102 557 5 0 4 560 123 679 0.0 1152
MS.gene66975.t1 MTR_6g029470 63.557 343 119 4 22 360 1 341 2.30e-149 432
MS.gene66975.t1 MTR_6g029470 59.690 258 98 4 22 275 1 256 5.77e-98 298
MS.gene66975.t1 MTR_1g012760 39.548 177 97 3 374 550 41 207 8.44e-35 133
MS.gene66975.t1 MTR_1g012760 39.548 177 97 3 374 550 30 196 1.07e-34 132
MS.gene66975.t1 MTR_3g072200 41.463 164 88 2 389 551 55 211 1.25e-31 129
MS.gene66975.t1 MTR_3g116710 39.881 168 93 4 374 538 71 233 1.49e-28 114
MS.gene66975.t1 MTR_3g077875 36.559 186 99 3 379 557 78 251 2.07e-28 115
MS.gene66975.t1 MTR_2g090505 38.150 173 101 3 379 550 83 250 5.91e-28 114
MS.gene66975.t1 MTR_7g056020 37.427 171 81 2 379 549 383 527 1.18e-27 117
MS.gene66975.t1 MTR_2g023130 33.708 178 71 1 373 550 18 148 1.78e-27 110
MS.gene66975.t1 MTR_1g099140 36.416 173 104 3 379 550 83 250 8.94e-26 111
MS.gene66975.t1 MTR_3g015530 34.783 161 97 3 379 538 49 202 1.58e-24 103
MS.gene66975.t1 MTR_6g464570 38.255 149 85 3 374 520 9 152 2.30e-24 99.8
MS.gene66975.t1 MTR_4g057300 41.176 119 69 1 434 551 4 122 3.25e-23 101
MS.gene66975.t1 MTR_6g075990 35.294 170 101 3 379 547 78 239 1.35e-22 97.8
MS.gene66975.t1 MTR_3g034840 36.601 153 84 3 380 528 69 212 1.57e-22 96.7
MS.gene66975.t1 MTR_0599s0020 36.601 153 84 3 380 528 69 212 1.57e-22 96.7
MS.gene66975.t1 MTR_4g119600 35.294 170 101 3 379 547 60 221 3.24e-22 98.6
MS.gene66975.t1 MTR_5g006100 36.628 172 88 5 394 557 69 227 3.42e-22 101
MS.gene66975.t1 MTR_1g058140 40.351 114 67 1 439 552 84 196 6.67e-22 95.1
MS.gene66975.t1 MTR_2g067930 38.462 143 80 2 410 551 59 194 1.71e-21 92.8
MS.gene66975.t1 MTR_1g081740 32.317 164 75 2 379 542 62 189 2.85e-21 92.0
MS.gene66975.t1 MTR_3g067290 29.952 207 126 6 346 545 27 221 3.09e-21 92.8
MS.gene66975.t1 MTR_3g087440 37.179 156 79 3 385 533 84 227 3.34e-21 93.2
MS.gene66975.t1 MTR_5g046160 36.000 150 72 3 394 542 55 181 7.98e-21 92.8
MS.gene66975.t1 MTR_2g461140 34.254 181 83 6 371 550 36 181 2.99e-20 89.0
MS.gene66975.t1 MTR_3g462670 37.815 119 73 1 434 551 63 181 4.75e-20 89.7
MS.gene66975.t1 MTR_5g046145 36.735 147 78 3 385 530 125 257 2.57e-19 90.1
MS.gene66975.t1 MTR_5g031650 28.807 243 137 8 302 529 4 225 4.29e-19 87.0
MS.gene66975.t1 MTR_5g032220 32.558 172 96 2 379 550 71 222 2.44e-18 88.6
MS.gene66975.t1 MTR_2g026585 31.792 173 82 2 379 551 63 199 3.05e-18 87.0
MS.gene66975.t1 MTR_8g107490 31.746 189 108 6 353 538 21 191 8.34e-18 84.7
MS.gene66975.t1 MTR_4g057975 31.429 175 98 5 351 523 37 191 1.59e-17 81.6
MS.gene66975.t1 MTR_8g445570 37.000 100 62 1 451 550 4 102 1.83e-17 78.6
MS.gene66975.t1 MTR_4g120790 33.333 168 75 3 377 544 62 192 2.22e-17 82.0
MS.gene66975.t1 MTR_8g020433 37.607 117 70 1 434 550 62 175 4.80e-17 84.3
MS.gene66975.t1 MTR_3g030230 40.541 111 64 2 420 529 61 170 4.88e-17 79.3
MS.gene66975.t1 MTR_7g065910 34.375 128 72 2 422 546 24 142 8.72e-17 82.8
MS.gene66975.t1 MTR_4g051638 36.000 125 72 2 379 502 123 240 1.40e-16 80.1
MS.gene66975.t1 MTR_0156s0040 36.434 129 79 1 432 557 2 130 1.84e-16 78.2
MS.gene66975.t1 MTR_7g050385 33.333 123 74 2 379 500 114 229 2.19e-16 79.3
MS.gene66975.t1 MTR_8g103800 37.374 99 62 0 452 550 96 194 3.27e-16 79.7
MS.gene66975.t1 MTR_4g113170 42.045 88 51 0 463 550 74 161 1.03e-15 80.9
MS.gene66975.t1 MTR_8g009330 31.953 169 93 4 350 517 65 212 1.10e-15 77.0
MS.gene66975.t1 MTR_1g080040 38.318 107 63 1 432 535 1 107 2.16e-15 73.9
MS.gene66975.t1 MTR_0528s0010 38.017 121 69 3 440 555 1 120 3.19e-15 73.2
MS.gene66975.t1 MTR_7g106560 36.449 107 60 1 453 551 75 181 8.85e-15 73.6
MS.gene66975.t1 MTR_1g043440 42.500 80 46 0 470 549 171 250 1.21e-14 75.5
MS.gene66975.t1 MTR_1g059880 36.522 115 65 2 375 488 67 174 1.30e-14 73.6
MS.gene66975.t1 MTR_7g034570 35.593 118 69 1 427 544 71 181 3.11e-14 71.6
MS.gene66975.t1 MTR_5g046245 42.222 90 50 2 462 550 6 94 5.50e-14 72.0
MS.gene66975.t1 MTR_0116s0050 25.907 193 93 3 359 551 30 172 1.96e-13 68.9
MS.gene66975.t1 MTR_4g100470 41.463 82 48 0 463 544 78 159 2.00e-13 69.7
MS.gene66975.t1 MTR_2g027000 41.975 81 45 1 470 548 94 174 2.45e-13 68.9
MS.gene66975.t1 MTR_6g089230 34.694 98 46 1 453 550 46 125 2.93e-13 70.1
MS.gene66975.t1 MTR_3g437000 36.364 99 55 2 377 474 39 130 4.06e-12 63.9
MS.gene66975.t1 MTR_7g024830 44.828 58 32 0 494 551 7 64 4.80e-12 62.0
MS.gene66975.t1 MTR_8g028020 43.590 78 40 1 482 555 4 81 5.70e-12 63.5
MS.gene66975.t1 MTR_1g098990 27.219 169 85 1 379 547 60 190 9.64e-12 66.2
MS.gene66975.t1 MTR_8g038805 38.961 77 46 1 434 509 55 131 1.53e-11 62.4
MS.gene66975.t1 MTR_3g467720 39.437 71 43 0 475 545 69 139 3.52e-11 61.6
MS.gene66975.t1 MTR_5g079560 32.308 130 64 4 379 501 74 186 4.02e-11 63.9
MS.gene66975.t1 MTR_7g060350 38.028 71 44 0 453 523 105 175 4.71e-11 62.4
MS.gene66975.t1 MTR_1g052890 35.632 87 56 0 464 550 2 88 5.99e-11 64.3
MS.gene66975.t1 MTR_2g030640 47.458 59 31 0 479 537 1 59 6.40e-11 58.5
MS.gene66975.t1 MTR_7g050365 31.034 116 55 2 437 551 20 111 7.44e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66975.t1 AT5G18200 52.695 334 154 2 28 358 16 348 1.02e-130 385

Find 126 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAAAACAACTGTGATTT+TGG 0.113532 6.4:+3910020 MS.gene66975:CDS
GAAGAAAGCTTCGGACTTTA+AGG 0.118306 6.4:+3904475 MS.gene66975:CDS
GAAAGAACGAATGGTGAATT+AGG 0.182607 6.4:-3904237 None:intergenic
TCAGAATTCAATTACCTCTT+TGG 0.260195 6.4:-3909794 None:intergenic
CCATTTCATCATCCAATTCA+TGG 0.288659 6.4:-3907698 None:intergenic
GTTGGATGGCGGTGAGGTTT+TGG 0.289225 6.4:+3904676 MS.gene66975:CDS
CTCGAGAGTATCTGCTGAAT+TGG 0.290913 6.4:+3909917 MS.gene66975:CDS
AGAATTAGAAATGGAAAATT+CGG 0.308880 6.4:+3910395 MS.gene66975:CDS
CTCTGCACACTTCCATGAAT+TGG 0.309156 6.4:+3907686 MS.gene66975:CDS
ATGAACCGAATTGGAAGATT+AGG 0.317682 6.4:+3904600 MS.gene66975:CDS
GAAACATTGTTTGGAACAAT+TGG 0.325735 6.4:-3907498 None:intergenic
GCGTTTGCCACCAACGGTTT+TGG 0.330783 6.4:-3904199 None:intergenic
AATCAACTGTTTGGAATGAA+TGG 0.338993 6.4:+3904429 MS.gene66975:CDS
CATCCATCACCATTTCTAAC+AGG 0.340093 6.4:-3910141 None:intergenic
TCGCAGTTTCAATTACTTCA+TGG 0.342193 6.4:-3910194 None:intergenic
CAGTAATAGGATCAGAGAAT+TGG 0.347025 6.4:+3904799 MS.gene66975:CDS
TTTACCGAAAATCAACTGTT+TGG 0.353650 6.4:+3904420 MS.gene66975:CDS
GCAGCATCCTCAGGCAAAAC+AGG 0.393377 6.4:-3909098 None:intergenic
CTCCTCAAAACCGCCGGATT+CGG 0.396406 6.4:-3904635 None:intergenic
AAAGAACGAATGGTGAATTA+GGG 0.400381 6.4:-3904236 None:intergenic
TGAGTCTATCAAATATGTTC+AGG 0.400935 6.4:+3904829 MS.gene66975:CDS
TGAACCGAATTGGAAGATTA+GGG 0.405403 6.4:+3904601 MS.gene66975:CDS
AGACGGGCAGAAACATTGTT+TGG 0.406511 6.4:-3907507 None:intergenic
AATGTCTGTAATATGTCTTT+CGG 0.410278 6.4:-3910294 None:intergenic
AAGAAAGCTTCGGACTTTAA+GGG 0.410858 6.4:+3904476 MS.gene66975:CDS
TTCCGTTTGATGAACCGAAT+TGG 0.416004 6.4:+3904591 MS.gene66975:CDS
CCATGAATTGGATGATGAAA+TGG 0.416074 6.4:+3907698 MS.gene66975:CDS
TTCTAGATTAGAATTAGAAA+TGG 0.416916 6.4:+3910386 MS.gene66975:CDS
TTCCAATTCGGTTCATCAAA+CGG 0.423615 6.4:-3904593 None:intergenic
CTGAATTGGGCACGAGCCAT+TGG 0.424435 6.4:+3909931 MS.gene66975:CDS
AACAATGTTTCTGCCCGTCT+TGG 0.431095 6.4:+3907510 MS.gene66975:CDS
GATGATGGGTTTGTGTTGGA+TGG 0.432960 6.4:+3904662 MS.gene66975:CDS
CAGAGCTGGCATACAGTCAT+TGG 0.433137 6.4:+3909006 MS.gene66975:CDS
GGAAGTGTGCAGAGTGATAC+CGG 0.436493 6.4:-3907677 None:intergenic
ACTAGTCCATTGCGTGGTGA+TGG 0.443182 6.4:+3908981 MS.gene66975:CDS
GGTGCATTCGGAGCAGTTGT+TGG 0.443840 6.4:+3904736 MS.gene66975:CDS
CCTCAGCTGATTCCGACAAC+TGG 0.444495 6.4:+3909044 MS.gene66975:CDS
ATCCTTCATATTTCCAAGAC+GGG 0.444712 6.4:-3907523 None:intergenic
GATTGAAAGTCCGGTGCATT+CGG 0.445242 6.4:+3904724 MS.gene66975:CDS
AGAATCTTTGCAGCATCCTC+AGG 0.453021 6.4:-3909107 None:intergenic
TCATTCTCATAGTCAAATCC+TGG 0.454234 6.4:+3907470 MS.gene66975:CDS
GATGCATTAGCTCGCAAGAC+TGG 0.455880 6.4:+3910078 MS.gene66975:CDS
ATTTGGATCTTCTTCCTCAT+CGG 0.456914 6.4:-3904393 None:intergenic
ACAACCCTAATCTTCCAATT+CGG 0.457062 6.4:-3904605 None:intergenic
TGCCCGTCTTGGAAATATGA+AGG 0.460206 6.4:+3907521 MS.gene66975:CDS
GGTTGTTGAGAGTCCGAATC+CGG 0.461837 6.4:+3904622 MS.gene66975:CDS
ATCAACTGTTTGGAATGAAT+GGG 0.467033 6.4:+3904430 MS.gene66975:CDS
GAGCCATTGGGAGAGAGCAC+GGG 0.469261 6.4:+3909944 MS.gene66975:CDS
TTTGGATGATGGGTTTGTGT+TGG 0.469528 6.4:+3904658 MS.gene66975:CDS
TTGAGATATGGGTTGTTCCC+CGG 0.472936 6.4:+3907658 MS.gene66975:CDS
TCGAGAGTATCTGCTGAATT+GGG 0.475872 6.4:+3909918 MS.gene66975:CDS
CTATAATCCACAATCTTAGT+TGG 0.475886 6.4:-3909757 None:intergenic
GAATTCAATTACCTCTTTGG+TGG 0.480591 6.4:-3909791 None:intergenic
CGTATAATACGAATCCTAGT+AGG 0.484679 6.4:+3904507 MS.gene66975:CDS
AGAGGAAGACCTGTTAGAAA+TGG 0.484950 6.4:+3910132 MS.gene66975:CDS
AAAACCTCGCCAACATCCTT+CGG 0.485711 6.4:-3904767 None:intergenic
TGAATTGGGCACGAGCCATT+GGG 0.487838 6.4:+3909932 MS.gene66975:CDS
TGATGTTGTGATTGAAAGTC+CGG 0.491355 6.4:+3904715 MS.gene66975:CDS
CGAGCCATTGGGAGAGAGCA+CGG 0.499186 6.4:+3909943 MS.gene66975:CDS
TTACAGGCACTTGATCTTGG+AGG 0.500262 6.4:+3908888 MS.gene66975:intron
AAGTGGCGAAGAGAAGTCTT+TGG 0.504021 6.4:+3910242 MS.gene66975:CDS
AAAAGACATCTTTCTAAGAG+TGG 0.507146 6.4:-3908922 None:intergenic
GGAACAACCCATATCTCAAA+AGG 0.510202 6.4:-3907654 None:intergenic
CCAAGCTCAAAACCAGTTGT+CGG 0.513221 6.4:-3909056 None:intergenic
AAGTAATTGAAACTGCGATC+GGG 0.517225 6.4:+3910199 MS.gene66975:CDS
GATGGGTTTGTGTTGGATGG+CGG 0.517434 6.4:+3904665 MS.gene66975:CDS
GTGTGAATCATAAAGTTGTA+TGG 0.517550 6.4:-3908960 None:intergenic
TTTACCTCCAACTAAGATTG+TGG 0.530003 6.4:+3909750 MS.gene66975:CDS
ACCATTCGTTCTTTCAACAC+TGG 0.531477 6.4:+3904245 MS.gene66975:CDS
GATTGAAGAAGAGGATAGGA+AGG 0.534376 6.4:+3910001 MS.gene66975:CDS
TATTTGTGACATTCAACTTG+AGG 0.538401 6.4:+3907572 MS.gene66975:CDS
CTAGTCCATTGCGTGGTGAT+GGG 0.539912 6.4:+3908982 MS.gene66975:CDS
GATTTGACGCCGAAGGATGT+TGG 0.540124 6.4:+3904758 MS.gene66975:CDS
CGGAACCAATGAAAAGAAGT+AGG 0.542610 6.4:-3907616 None:intergenic
AGATAAAACGAAGAAAGCTT+CGG 0.545303 6.4:+3904466 MS.gene66975:CDS
TTGGAACAATTGGCAAGCCC+AGG 0.545421 6.4:-3907488 None:intergenic
ACACACGGCTTATTCCTACT+AGG 0.547965 6.4:-3904521 None:intergenic
AGAAAGCTTCGGACTTTAAG+GGG 0.551243 6.4:+3904477 MS.gene66975:CDS
GTTGTTGGATTTGACGCCGA+AGG 0.553373 6.4:+3904751 MS.gene66975:CDS
TAATCCACAATCTTAGTTGG+AGG 0.553577 6.4:-3909754 None:intergenic
ATGAGAACCAAAACCGTTGG+TGG 0.555752 6.4:+3904192 MS.gene66975:CDS
CGAACGGCGTTTGCCACCAA+CGG 0.555890 6.4:-3904205 None:intergenic
TAACAGGTCTTCCTCTCAGT+CGG 0.558034 6.4:-3910125 None:intergenic
AACAACTGCTCCGAATGCAC+CGG 0.558050 6.4:-3904734 None:intergenic
ACATATGCCGGTCGGCTAAG+TGG 0.558333 6.4:+3910225 MS.gene66975:CDS
AATCCTTCATATTTCCAAGA+CGG 0.559891 6.4:-3907524 None:intergenic
GGTCTTCCTCTCAGTCGGAA+TGG 0.566394 6.4:-3910120 None:intergenic
TCCAAACTCCTCAAAACCGC+CGG 0.568354 6.4:-3904641 None:intergenic
AAAGGAAATGAAGCAGCAAA+CGG 0.568655 6.4:-3907636 None:intergenic
GAAGTGTGCAGAGTGATACC+GGG 0.570950 6.4:-3907676 None:intergenic
GCGTGGTGATGGGTCAGAGC+TGG 0.574501 6.4:+3908992 MS.gene66975:CDS
CATTCTCATAGTCAAATCCT+GGG 0.575192 6.4:+3907471 MS.gene66975:CDS
GAAGTAATTGAAACTGCGAT+CGG 0.582267 6.4:+3910198 MS.gene66975:CDS
TTCCTGTGTTTGCACATGAA+AGG 0.585708 6.4:+3909144 MS.gene66975:CDS
AAGACTGGAACAAAGAAATG+TGG 0.586177 6.4:+3910093 MS.gene66975:CDS
ACAATGGCGGATTGAAGAAG+AGG 0.587218 6.4:+3909992 MS.gene66975:CDS
CTCTTCGCCACTTAGCCGAC+CGG 0.590945 6.4:-3910232 None:intergenic
TACCTTTCATGTGCAAACAC+AGG 0.597392 6.4:-3909146 None:intergenic
ACCATGAGAACCAAAACCGT+TGG 0.597638 6.4:+3904189 None:intergenic
TGGAAAATATAGACAATACA+AGG 0.599857 6.4:+3910056 MS.gene66975:CDS
AAGCCGTGTGTGTATTGCAT+TGG 0.600783 6.4:+3904533 MS.gene66975:CDS
GTTTGTGTTGGATGGCGGTG+AGG 0.606103 6.4:+3904670 MS.gene66975:CDS
GCGATCGGGAGCACATATGC+CGG 0.610976 6.4:+3910213 MS.gene66975:CDS
ACCAGTGTTGAAAGAACGAA+TGG 0.618296 6.4:-3904246 None:intergenic
CTGTTAGAAATGGTGATGGA+TGG 0.620170 6.4:+3910142 MS.gene66975:CDS
AAACCCGTGCTCTCTCCCAA+TGG 0.622311 6.4:-3909947 None:intergenic
AGACCTGTTAGAAATGGTGA+TGG 0.628565 6.4:+3910138 MS.gene66975:CDS
GACGCCGAAGGATGTTGGCG+AGG 0.629659 6.4:+3904763 MS.gene66975:CDS
TGATGCATTCACCACCAAAG+AGG 0.630981 6.4:+3909780 MS.gene66975:CDS
TGTTGAGAGTCCGAATCCGG+CGG 0.631477 6.4:+3904625 MS.gene66975:CDS
GGCGGATTGAAGAAGAGGAT+AGG 0.632863 6.4:+3909997 MS.gene66975:CDS
TCTGACCCATCACCACGCAA+TGG 0.638701 6.4:-3908987 None:intergenic
AGACTGGAACAAAGAAATGT+GGG 0.639374 6.4:+3910094 MS.gene66975:CDS
AATTAGGGTTGATTAACGAA+CGG 0.647083 6.4:-3904221 None:intergenic
CCAGTTGTCGGAATCAGCTG+AGG 0.654012 6.4:-3909044 None:intergenic
TTCAGCAGATACTCTCGAGT+AGG 0.654168 6.4:-3909913 None:intergenic
GGGTGTCCATTCCGACTGAG+AGG 0.661322 6.4:+3910114 MS.gene66975:CDS
ATCATTCAAAGATCAGACAA+TGG 0.661996 6.4:+3909976 MS.gene66975:CDS
TGGAAAGTGAACGTAGTGTG+TGG 0.664110 6.4:+3910162 MS.gene66975:CDS
TGACCAATGCAATACACACA+CGG 0.674183 6.4:-3904536 None:intergenic
TCGGGAGCACATATGCCGGT+CGG 0.680903 6.4:+3910217 MS.gene66975:CDS
TGAATCATAAAGTTGTATGG+CGG 0.697778 6.4:-3908957 None:intergenic
ATTCAAAGATCAGACAATGG+CGG 0.698505 6.4:+3909979 MS.gene66975:CDS
TCATGAAGATGAATGTAGTG+AGG 0.706412 6.4:+3904556 MS.gene66975:CDS
ATTCACACTAGTCCATTGCG+TGG 0.708834 6.4:+3908975 MS.gene66975:CDS
AAGTGTGCAGAGTGATACCG+GGG 0.743726 6.4:-3907675 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTA+AGG + chr6.4:3909817-3909836 MS.gene66975:intron 0.0%
!! TTGAAAAATTAAATAAGAAA+TGG + chr6.4:3907923-3907942 MS.gene66975:intron 10.0%
!! AAATAAATGTCAAGATATAA+TGG - chr6.4:3908869-3908888 None:intergenic 15.0%
!! ATTTATATTTATACAGAACA+AGG - chr6.4:3907323-3907342 None:intergenic 15.0%
!! CAATTATATATGTAAAGTAA+AGG - chr6.4:3906831-3906850 None:intergenic 15.0%
!! GAATATAGTTGTATTATATT+TGG + chr6.4:3907969-3907988 MS.gene66975:intron 15.0%
!! TTAATTTATCTATCATTACA+TGG + chr6.4:3909462-3909481 MS.gene66975:intron 15.0%
!!! GTATTGTTAAATTTTTTTGA+AGG + chr6.4:3909713-3909732 MS.gene66975:intron 15.0%
!!! GTTTATAATTGTTGTTTTAT+AGG + chr6.4:3904929-3904948 MS.gene66975:intron 15.0%
!!! TATAATTGTTATTTGACTTT+GGG + chr6.4:3907164-3907183 MS.gene66975:intron 15.0%
!!! TTATAATTGTTATTTGACTT+TGG + chr6.4:3907163-3907182 MS.gene66975:intron 15.0%
!!! TTGATTTTATTAATCTTTGA+AGG + chr6.4:3907407-3907426 MS.gene66975:intron 15.0%
!! AATTACATTATTGTAAGAAC+TGG - chr6.4:3906584-3906603 None:intergenic 20.0%
!! ACACTGAATACAAATAAAAA+AGG - chr6.4:3906807-3906826 None:intergenic 20.0%
!! AGAATTAGAAATGGAAAATT+CGG + chr6.4:3910395-3910414 MS.gene66975:CDS 20.0%
!! ATGAAATGTAATTACTACAA+TGG + chr6.4:3905103-3905122 MS.gene66975:intron 20.0%
!! ATTGTGAAAAATAAATCCTT+TGG + chr6.4:3906344-3906363 MS.gene66975:intron 20.0%
!! ATTTAAATCCAGTAAAAATC+TGG - chr6.4:3909550-3909569 None:intergenic 20.0%
!! ATTTAGACATGTAATATTGT+CGG + chr6.4:3909407-3909426 MS.gene66975:intron 20.0%
!! CACTGAATACAAATAAAAAA+GGG - chr6.4:3906806-3906825 None:intergenic 20.0%
!! CTTTGAATGATAAATTGAAA+TGG - chr6.4:3908197-3908216 None:intergenic 20.0%
!! GTGATAATAATTTCAGAAAA+TGG + chr6.4:3905552-3905571 MS.gene66975:intron 20.0%
!! TTAGGAATTATAGTATAACA+CGG + chr6.4:3908027-3908046 MS.gene66975:intron 20.0%
!! TTCACAGATTAATAAACATA+GGG - chr6.4:3908456-3908475 None:intergenic 20.0%
!! TTCTAGATTAGAATTAGAAA+TGG + chr6.4:3910386-3910405 MS.gene66975:CDS 20.0%
!! TTGTGAAAAATAAATCCTTT+GGG + chr6.4:3906345-3906364 MS.gene66975:intron 20.0%
!! TTTAAATCCAGTAAAAATCT+GGG - chr6.4:3909549-3909568 None:intergenic 20.0%
!! TTTCACAGATTAATAAACAT+AGG - chr6.4:3908457-3908476 None:intergenic 20.0%
!!! ATAGGACATAAATTTTGATT+AGG + chr6.4:3908009-3908028 MS.gene66975:intron 20.0%
!!! GGTTTCTAAAATTTATGAAT+AGG - chr6.4:3906704-3906723 None:intergenic 20.0%
!!! TATCTTGACATTTATTTTAC+AGG + chr6.4:3908872-3908891 MS.gene66975:intron 20.0%
!!! TTGTTGTTTTATAGGAAAAT+TGG + chr6.4:3904937-3904956 MS.gene66975:intron 20.0%
!!! TTTTGCATTTCAACATAAAT+AGG - chr6.4:3907747-3907766 None:intergenic 20.0%
! AATGACAAATTACATGAAAC+AGG - chr6.4:3907380-3907399 None:intergenic 25.0%
! AATGTCTGTAATATGTCTTT+CGG - chr6.4:3910297-3910316 None:intergenic 25.0%
! ACAAATAAAAAAGGGAATGA+AGG - chr6.4:3906798-3906817 None:intergenic 25.0%
! AGTATATGAATAACGTGAAA+AGG - chr6.4:3909438-3909457 None:intergenic 25.0%
! ATCAGAAATATGTGAATGTT+AGG + chr6.4:3908305-3908324 MS.gene66975:intron 25.0%
! ATTTATGAATAGGTCCTAAT+TGG - chr6.4:3906694-3906713 None:intergenic 25.0%
! CAAAAGTTTATCAAGTGTTA+TGG + chr6.4:3909572-3909591 MS.gene66975:intron 25.0%
! CATAGTTTCGAGAAAAAAAT+AGG - chr6.4:3908261-3908280 None:intergenic 25.0%
! CTTGACATCAAATAATCAAA+TGG + chr6.4:3909317-3909336 MS.gene66975:intron 25.0%
! GAAATCAATGTTATCAATAG+CGG - chr6.4:3906933-3906952 None:intergenic 25.0%
! TAAGCTATGATTTATGATCT+AGG + chr6.4:3907136-3907155 MS.gene66975:intron 25.0%
! TACTATTTATTCAAACCTGT+CGG - chr6.4:3905426-3905445 None:intergenic 25.0%
! TCAGAAATATGTGAATGTTA+GGG + chr6.4:3908306-3908325 MS.gene66975:intron 25.0%
! TCATAATTCCAATGTCTATT+GGG - chr6.4:3908688-3908707 None:intergenic 25.0%
! TGGAAAATATAGACAATACA+AGG + chr6.4:3910056-3910075 MS.gene66975:CDS 25.0%
! TGTGATAATTTCTTCTTTCA+GGG - chr6.4:3906561-3906580 None:intergenic 25.0%
! TGTTATTCAGTTACATTTGA+AGG - chr6.4:3908079-3908098 None:intergenic 25.0%
! TTACCAACTATATATACATG+TGG + chr6.4:3908804-3908823 MS.gene66975:intron 25.0%
! TTACCACATGTATATATAGT+TGG - chr6.4:3908810-3908829 None:intergenic 25.0%
! TTAGCATCTTGATTGAAATA+TGG + chr6.4:3909371-3909390 MS.gene66975:intron 25.0%
! TTATTTGATGTCAAGAACTT+AGG - chr6.4:3909312-3909331 None:intergenic 25.0%
!! ACTATGCTAGATCTTTTATA+AGG + chr6.4:3907867-3907886 MS.gene66975:intron 25.0%
!! AGATAAGAACTTTTACAACA+AGG - chr6.4:3906984-3907003 None:intergenic 25.0%
!! CATAACACTTGATAAACTTT+TGG - chr6.4:3909574-3909593 None:intergenic 25.0%
!! CTATGCTAGATCTTTTATAA+GGG + chr6.4:3907868-3907887 MS.gene66975:intron 25.0%
!! GATAAGAACTTTTACAACAA+GGG - chr6.4:3906983-3907002 None:intergenic 25.0%
!! TGAAAGGTATGAAATTTACT+CGG + chr6.4:3909160-3909179 MS.gene66975:intron 25.0%
!!! AAGGATTTTTTTTATCAGAC+AGG + chr6.4:3907540-3907559 MS.gene66975:CDS 25.0%
!!! AAGTTTTGAGATTTGGTTTT+TGG + chr6.4:3909632-3909651 MS.gene66975:intron 25.0%
!!! AGGATTTTTTTTATCAGACA+GGG + chr6.4:3907541-3907560 MS.gene66975:CDS 25.0%
!!! CATAAATTTTAGAAACCGAA+TGG + chr6.4:3906707-3906726 MS.gene66975:intron 25.0%
!!! GTTTCTGAGAGTTTATTTTA+AGG + chr6.4:3909686-3909705 MS.gene66975:intron 25.0%
!!! GTTTGTTTTTTTTGTGGATT+TGG + chr6.4:3904851-3904870 MS.gene66975:intron 25.0%
!!! TCTCTTTAAGTTTTGAGATT+TGG + chr6.4:3909625-3909644 MS.gene66975:intron 25.0%
!!! TTCATTTCCTTTTGAGATAT+GGG + chr6.4:3907647-3907666 MS.gene66975:CDS 25.0%
!!! TTTTTGTTGCTTTCAGTAAT+AGG + chr6.4:3904786-3904805 MS.gene66975:CDS 25.0%
AAAGAACGAATGGTGAATTA+GGG - chr6.4:3904239-3904258 None:intergenic 30.0%
AACAAGATTAACTATGGTAG+AGG + chr6.4:3906405-3906424 MS.gene66975:intron 30.0%
AACAAGCATCATAAAACTTC+TGG + chr6.4:3908420-3908439 MS.gene66975:intron 30.0%
AAGTAAGCCTTCAATATAAG+TGG + chr6.4:3906520-3906539 MS.gene66975:intron 30.0%
AATATGCATGTTTGCCAATT+AGG + chr6.4:3906677-3906696 MS.gene66975:intron 30.0%
AATCCTTCATATTTCCAAGA+CGG - chr6.4:3907527-3907546 None:intergenic 30.0%
AATGAAAGTGAATGTGATAC+TGG + chr6.4:3904972-3904991 MS.gene66975:intron 30.0%
ACAATGCACACAATTGATAA+TGG + chr6.4:3906155-3906174 MS.gene66975:intron 30.0%
ACTGAGAGGTTTACATATTA+CGG - chr6.4:3906758-3906777 None:intergenic 30.0%
AGAAATATGTGAATGTTAGG+GGG + chr6.4:3908308-3908327 MS.gene66975:intron 30.0%
AGAGTATGAAATTGTGTAGT+TGG + chr6.4:3905161-3905180 MS.gene66975:intron 30.0%
AGATAAAACGAAGAAAGCTT+CGG + chr6.4:3904466-3904485 MS.gene66975:CDS 30.0%
AGTAAGCCTTCAATATAAGT+GGG + chr6.4:3906521-3906540 MS.gene66975:intron 30.0%
AGTAATACTCATTGACCATT+CGG - chr6.4:3906725-3906744 None:intergenic 30.0%
ATAGTTAATCTTGTTCGAGA+TGG - chr6.4:3906400-3906419 None:intergenic 30.0%
ATATGAATAACGTGAAAAGG+AGG - chr6.4:3909435-3909454 None:intergenic 30.0%
ATCATTCAAAGATCAGACAA+TGG + chr6.4:3909976-3909995 MS.gene66975:CDS 30.0%
ATCTCGAACAAGATTAACTA+TGG + chr6.4:3906399-3906418 MS.gene66975:intron 30.0%
ATGAAATAATTCAGCAGTCT+AGG + chr6.4:3908278-3908297 MS.gene66975:intron 30.0%
ATTAAGAAAATAAGTCCCAG+AGG - chr6.4:3906623-3906642 None:intergenic 30.0%
CAAAAATCTGCTATGTTAGA+TGG - chr6.4:3906905-3906924 None:intergenic 30.0%
CAATAGACATTGGAATTATG+AGG + chr6.4:3908687-3908706 MS.gene66975:intron 30.0%
CAGAAATATGTGAATGTTAG+GGG + chr6.4:3908307-3908326 MS.gene66975:intron 30.0%
CTATAATCCACAATCTTAGT+TGG - chr6.4:3909760-3909779 None:intergenic 30.0%
CTCATAATTCCAATGTCTAT+TGG - chr6.4:3908689-3908708 None:intergenic 30.0%
GACACTTCTAATATGAAAGT+AGG + chr6.4:3907068-3907087 MS.gene66975:intron 30.0%
GGTTAATGAAAACGATGAAT+GGG - chr6.4:3904293-3904312 None:intergenic 30.0%
GTAAAGATATGTTCCTTAGT+GGG + chr6.4:3906303-3906322 MS.gene66975:intron 30.0%
GTGTGAATCATAAAGTTGTA+TGG - chr6.4:3908963-3908982 None:intergenic 30.0%
GTGTGATAATTTCTTCTTTC+AGG - chr6.4:3906562-3906581 None:intergenic 30.0%
TAGTTAATCTTGTTCGAGAT+GGG - chr6.4:3906399-3906418 None:intergenic 30.0%
TATCTGGACATGACTTTAAT+TGG + chr6.4:3905634-3905653 MS.gene66975:intron 30.0%
TATTTGTGACATTCAACTTG+AGG + chr6.4:3907572-3907591 MS.gene66975:CDS 30.0%
TCAGAATTCAATTACCTCTT+TGG - chr6.4:3909797-3909816 None:intergenic 30.0%
TCGTATCACACATGATTTAA+AGG + chr6.4:3907797-3907816 MS.gene66975:intron 30.0%
TGAATCATAAAGTTGTATGG+CGG - chr6.4:3908960-3908979 None:intergenic 30.0%
TGAGTCTATCAAATATGTTC+AGG + chr6.4:3904829-3904848 MS.gene66975:CDS 30.0%
TGTAAAGATATGTTCCTTAG+TGG + chr6.4:3906302-3906321 MS.gene66975:intron 30.0%
TTTACCGAAAATCAACTGTT+TGG + chr6.4:3904420-3904439 MS.gene66975:CDS 30.0%
TTTAGACAATAACCTCCAAA+CGG - chr6.4:3908839-3908858 None:intergenic 30.0%
TTTATCAAGTGTTATGGCAT+TGG + chr6.4:3909578-3909597 MS.gene66975:intron 30.0%
TTTGGAGGTTATTGTCTAAA+AGG + chr6.4:3908839-3908858 MS.gene66975:intron 30.0%
! AAAAGACATCTTTCTAAGAG+TGG - chr6.4:3908925-3908944 None:intergenic 30.0%
! AAGGAAAACAACTGTGATTT+TGG + chr6.4:3910020-3910039 MS.gene66975:CDS 30.0%
! AATCAACTGTTTGGAATGAA+TGG + chr6.4:3904429-3904448 MS.gene66975:CDS 30.0%
! AATGTAGTGAGGAGATTTTT+AGG + chr6.4:3904567-3904586 MS.gene66975:CDS 30.0%
! AATTAGGGTTGATTAACGAA+CGG - chr6.4:3904224-3904243 None:intergenic 30.0%
! ACGTTTTTGATAGACTCAAA+AGG - chr6.4:3905738-3905757 None:intergenic 30.0%
! AGGAAAACAACTGTGATTTT+GGG + chr6.4:3910021-3910040 MS.gene66975:CDS 30.0%
! ATCAACTGTTTGGAATGAAT+GGG + chr6.4:3904430-3904449 MS.gene66975:CDS 30.0%
! ATCTTCCTACTTCTTTTCAT+TGG + chr6.4:3907611-3907630 MS.gene66975:CDS 30.0%
! ATGTAGTGAGGAGATTTTTA+GGG + chr6.4:3904568-3904587 MS.gene66975:CDS 30.0%
! CATCTAACATAGCAGATTTT+TGG + chr6.4:3906903-3906922 MS.gene66975:intron 30.0%
! CTTGATTGAAATATGGACTA+TGG + chr6.4:3909378-3909397 MS.gene66975:intron 30.0%
! GAAACATTGTTTGGAACAAT+TGG - chr6.4:3907501-3907520 None:intergenic 30.0%
! GATTTTCGGTAAATTGGATT+TGG - chr6.4:3904413-3904432 None:intergenic 30.0%
! GGCATTGGAATTTAAATTCT+GGG + chr6.4:3909593-3909612 MS.gene66975:intron 30.0%
! TATATGTGTAAGTGTTGTGT+CGG + chr6.4:3905592-3905611 MS.gene66975:intron 30.0%
! TATGTGAGCTTGAATCTTTT+TGG + chr6.4:3907015-3907034 MS.gene66975:intron 30.0%
! TGAGATTTTTCTCTCTTGTT+TGG + chr6.4:3906026-3906045 MS.gene66975:intron 30.0%
! TGGCATTGGAATTTAAATTC+TGG + chr6.4:3909592-3909611 MS.gene66975:intron 30.0%
! TTTTTATCTGACCAGAGAAT+AGG + chr6.4:3905131-3905150 MS.gene66975:intron 30.0%
!! ACAGTTGATTTTCGGTAAAT+TGG - chr6.4:3904419-3904438 None:intergenic 30.0%
!! ACTTTAATTGGAAGTGTCAA+TGG + chr6.4:3905646-3905665 MS.gene66975:intron 30.0%
!! CATTCCAAACAGTTGATTTT+CGG - chr6.4:3904427-3904446 None:intergenic 30.0%
!! TTGAAGGTGTTTAAAAACCA+TGG + chr6.4:3907423-3907442 MS.gene66975:intron 30.0%
!!! CTATCTGTTTTGAAATTGTG+TGG + chr6.4:3905335-3905354 MS.gene66975:intron 30.0%
!!! CTTCATTTCCTTTTGAGATA+TGG + chr6.4:3907646-3907665 MS.gene66975:CDS 30.0%
!!! GTTCAGGTTTGTTTTTTTTG+TGG + chr6.4:3904845-3904864 MS.gene66975:intron 30.0%
!!! TAAATTTTTTTGAAGGCGCA+TGG + chr6.4:3909720-3909739 MS.gene66975:intron 30.0%
!!! TCTGAGAGTTTATTTTAAGG+TGG + chr6.4:3909689-3909708 MS.gene66975:intron 30.0%
AAAAACCATGGTGAAAAAGC+TGG + chr6.4:3907435-3907454 MS.gene66975:CDS 35.0%
AAAGGAAATGAAGCAGCAAA+CGG - chr6.4:3907639-3907658 None:intergenic 35.0%
AACACAACATAACACAATCC+AGG - chr6.4:3908136-3908155 None:intergenic 35.0%
AAGAAAGCTTCGGACTTTAA+GGG + chr6.4:3904476-3904495 MS.gene66975:CDS 35.0%
AAGACTGGAACAAAGAAATG+TGG + chr6.4:3910093-3910112 MS.gene66975:CDS 35.0%
AAGATTAACTATGGTAGAGG+AGG + chr6.4:3906408-3906427 MS.gene66975:intron 35.0%
AAGTAATTGAAACTGCGATC+GGG + chr6.4:3910199-3910218 MS.gene66975:CDS 35.0%
ACAACCCTAATCTTCCAATT+CGG - chr6.4:3904608-3904627 None:intergenic 35.0%
ACATGGCAATAATTAGCAAG+AGG + chr6.4:3908628-3908647 MS.gene66975:intron 35.0%
AGACTGGAACAAAGAAATGT+GGG + chr6.4:3910094-3910113 MS.gene66975:CDS 35.0%
AGCATCATAAAACTTCTGGT+TGG + chr6.4:3908424-3908443 MS.gene66975:intron 35.0%
ATAACCCCCACTTATATTGA+AGG - chr6.4:3906530-3906549 None:intergenic 35.0%
ATAGATAAACCCTGTTAGGT+TGG + chr6.4:3905910-3905929 MS.gene66975:intron 35.0%
ATCACACAAACACTATGCAT+CGG - chr6.4:3906465-3906484 None:intergenic 35.0%
ATCCTTCATATTTCCAAGAC+GGG - chr6.4:3907526-3907545 None:intergenic 35.0%
ATGAACCGAATTGGAAGATT+AGG + chr6.4:3904600-3904619 MS.gene66975:CDS 35.0%
ATGTGGTAATTTCTTCCGTT+TGG + chr6.4:3908821-3908840 MS.gene66975:intron 35.0%
ATTCAAACCAGATACATTGC+CGG - chr6.4:3905304-3905323 None:intergenic 35.0%
ATTCAAAGATCAGACAATGG+CGG + chr6.4:3909979-3909998 MS.gene66975:CDS 35.0%
ATTTGGATCTTCTTCCTCAT+CGG - chr6.4:3904396-3904415 None:intergenic 35.0%
CAAGGGACACAAAATTTACA+AGG - chr6.4:3906966-3906985 None:intergenic 35.0%
CAGTAATAGGATCAGAGAAT+TGG + chr6.4:3904799-3904818 MS.gene66975:CDS 35.0%
CATTCTCATAGTCAAATCCT+GGG + chr6.4:3907471-3907490 MS.gene66975:CDS 35.0%
CCATGAATTGGATGATGAAA+TGG + chr6.4:3907698-3907717 MS.gene66975:CDS 35.0%
CCATTTCATCATCCAATTCA+TGG - chr6.4:3907701-3907720 None:intergenic 35.0%
CGTATAATACGAATCCTAGT+AGG + chr6.4:3904507-3904526 MS.gene66975:CDS 35.0%
CTCTCAAATGCACCTAAATA+GGG - chr6.4:3909279-3909298 None:intergenic 35.0%
CTTGATAGATAAACCCTGTT+AGG + chr6.4:3905906-3905925 MS.gene66975:intron 35.0%
GAAAGAACGAATGGTGAATT+AGG - chr6.4:3904240-3904259 None:intergenic 35.0%
GAAATGGTGTTTGAATGTCA+TGG + chr6.4:3907939-3907958 MS.gene66975:intron 35.0%
GAAGTAATTGAAACTGCGAT+CGG + chr6.4:3910198-3910217 MS.gene66975:CDS 35.0%
GAATTCAATTACCTCTTTGG+TGG - chr6.4:3909794-3909813 None:intergenic 35.0%
GAGTCTATCAAAAACGTTCA+AGG + chr6.4:3905741-3905760 MS.gene66975:intron 35.0%
GATATTAGTCCTTGTTCACT+TGG + chr6.4:3906050-3906069 MS.gene66975:intron 35.0%
GCAAAAAGGGGTGAAAATTA+GGG - chr6.4:3904367-3904386 None:intergenic 35.0%
GCACTTGATAAATAAACCCT+AGG + chr6.4:3905679-3905698 MS.gene66975:intron 35.0%
GGGTTAATGAAAACGATGAA+TGG - chr6.4:3904294-3904313 None:intergenic 35.0%
GTAAGCCTTCAATATAAGTG+GGG + chr6.4:3906522-3906541 MS.gene66975:intron 35.0%
GTTAGTTAAGTAAAGCCTCT+GGG + chr6.4:3906605-3906624 MS.gene66975:intron 35.0%
TAAGCCTTCAATATAAGTGG+GGG + chr6.4:3906523-3906542 MS.gene66975:intron 35.0%
TAATCCACAATCTTAGTTGG+AGG - chr6.4:3909757-3909776 None:intergenic 35.0%
TCATGAAGATGAATGTAGTG+AGG + chr6.4:3904556-3904575 MS.gene66975:CDS 35.0%
TCATTCTCATAGTCAAATCC+TGG + chr6.4:3907470-3907489 MS.gene66975:CDS 35.0%
TCGCAGTTTCAATTACTTCA+TGG - chr6.4:3910197-3910216 None:intergenic 35.0%
TCTCTCAAATGCACCTAAAT+AGG - chr6.4:3909280-3909299 None:intergenic 35.0%
TGAACCGAATTGGAAGATTA+GGG + chr6.4:3904601-3904620 MS.gene66975:CDS 35.0%
TGATGTTGTGATTGAAAGTC+CGG + chr6.4:3904715-3904734 MS.gene66975:CDS 35.0%
TGCAAAAAGGGGTGAAAATT+AGG - chr6.4:3904368-3904387 None:intergenic 35.0%
TGCATAAAAACTCTGAGCTT+TGG + chr6.4:3908572-3908591 MS.gene66975:intron 35.0%
TGTCCTATCCTGTATGATTA+AGG - chr6.4:3907997-3908016 None:intergenic 35.0%
TGTTAGTTAAGTAAAGCCTC+TGG + chr6.4:3906604-3906623 MS.gene66975:intron 35.0%
TTATGACTGTTGTCTTCTTC+TGG + chr6.4:3907352-3907371 MS.gene66975:intron 35.0%
TTCCAATTCGGTTCATCAAA+CGG - chr6.4:3904596-3904615 None:intergenic 35.0%
TTTACCTCCAACTAAGATTG+TGG + chr6.4:3909750-3909769 MS.gene66975:CDS 35.0%
! ATGAAATTGTGTAGTTGGTG+TGG + chr6.4:3905166-3905185 MS.gene66975:intron 35.0%
! ATTTTACAGGCACTTGATCT+TGG + chr6.4:3908885-3908904 MS.gene66975:intron 35.0%
! CAAGACTGTGATGCATTTTA+TGG - chr6.4:3908230-3908249 None:intergenic 35.0%
! CAGCAGACAAGTTTGAAATT+AGG - chr6.4:3909189-3909208 None:intergenic 35.0%
! GCATCATAAAACTTCTGGTT+GGG + chr6.4:3908425-3908444 MS.gene66975:intron 35.0%
! TAATTTTCACCCCTTTTTGC+AGG + chr6.4:3904367-3904386 MS.gene66975:intron 35.0%
! TTGAGCTATAGACACAGTTT+TGG + chr6.4:3908758-3908777 MS.gene66975:intron 35.0%
! TTTGAAATTGTGTGGTTGGT+GGG + chr6.4:3905343-3905362 MS.gene66975:intron 35.0%
!! ATTTGGTGCCTTAATCATAC+AGG + chr6.4:3907986-3908005 MS.gene66975:intron 35.0%
!! CACAATTGATAATGGATGTG+TGG + chr6.4:3906163-3906182 MS.gene66975:intron 35.0%
!! GTAGTCGAACTTTTTCTAGT+TGG + chr6.4:3906213-3906232 MS.gene66975:intron 35.0%
!! TAATGGATGTGTGGTCATTT+TGG + chr6.4:3906172-3906191 MS.gene66975:intron 35.0%
!! TTTTGAGGAGTTTGGATGAT+GGG + chr6.4:3904648-3904667 MS.gene66975:CDS 35.0%
!!! ATCTAGAACGTTTTAGCTGT+TGG - chr6.4:3910374-3910393 None:intergenic 35.0%
!!! ATGTGTGGTCATTTTGGAAT+AGG + chr6.4:3906178-3906197 MS.gene66975:intron 35.0%
!!! CTGTTTTGAAATTGTGTGGT+TGG + chr6.4:3905339-3905358 MS.gene66975:intron 35.0%
!!! GAATCTTTTTGGCTGCTTTA+CGG + chr6.4:3907026-3907045 MS.gene66975:intron 35.0%
!!! TTTTGAAATTGTGTGGTTGG+TGG + chr6.4:3905342-3905361 MS.gene66975:intron 35.0%
AAACCAAATACCTCCCACTA+AGG - chr6.4:3906319-3906338 None:intergenic 40.0%
AAGATATGTTCCTTAGTGGG+AGG + chr6.4:3906306-3906325 MS.gene66975:intron 40.0%
AAGGGGTGAAAATTAGGGTT+AGG - chr6.4:3904362-3904381 None:intergenic 40.0%
AATCCAGGTTTACCACACAA+AGG - chr6.4:3908121-3908140 None:intergenic 40.0%
ACAGATGCAACAGCTGAATT+TGG + chr6.4:3908516-3908535 MS.gene66975:intron 40.0%
ACCATTCGTTCTTTCAACAC+TGG + chr6.4:3904245-3904264 MS.gene66975:CDS 40.0%
AGAAAGCTTCGGACTTTAAG+GGG + chr6.4:3904477-3904496 MS.gene66975:CDS 40.0%
AGACCTGTTAGAAATGGTGA+TGG + chr6.4:3910138-3910157 MS.gene66975:CDS 40.0%
AGAGGAAGACCTGTTAGAAA+TGG + chr6.4:3910132-3910151 MS.gene66975:CDS 40.0%
AGCATGTTGGATATGCAAGT+AGG + chr6.4:3905942-3905961 MS.gene66975:intron 40.0%
AGGATGTATAGGGATACAAG+TGG + chr6.4:3906428-3906447 MS.gene66975:intron 40.0%
AGGGGTGAAAATTAGGGTTA+GGG - chr6.4:3904361-3904380 None:intergenic 40.0%
ATACAGAACAAGGCAAGACT+AGG - chr6.4:3907313-3907332 None:intergenic 40.0%
ATAGTGTTGCCAGCAAATAG+CGG - chr6.4:3906879-3906898 None:intergenic 40.0%
ATGCAAGTAGGAAGAATGTG+CGG + chr6.4:3905954-3905973 MS.gene66975:intron 40.0%
ATGGCTAGACATCAATCCTA+AGG - chr6.4:3905989-3906008 None:intergenic 40.0%
ATGGTAGAGGAGGATGTATA+GGG + chr6.4:3906418-3906437 MS.gene66975:intron 40.0%
CACTACTCTCACATTACCTA+TGG - chr6.4:3906008-3906027 None:intergenic 40.0%
CAGATACATTGTCAATGTCG+CGG - chr6.4:3905044-3905063 None:intergenic 40.0%
CATCCATCACCATTTCTAAC+AGG - chr6.4:3910144-3910163 None:intergenic 40.0%
CATTACATGGATACGAGAAG+AGG + chr6.4:3909475-3909494 MS.gene66975:intron 40.0%
CGGAACCAATGAAAAGAAGT+AGG - chr6.4:3907619-3907638 None:intergenic 40.0%
CTCTCAAATCACCTATTCTC+TGG - chr6.4:3905145-3905164 None:intergenic 40.0%
CTGTATGCGATGGACATTTA+GGG + chr6.4:3908662-3908681 MS.gene66975:intron 40.0%
CTTTACGGCTGTGTTTGTAT+GGG + chr6.4:3907041-3907060 MS.gene66975:intron 40.0%
GAAGAAAGCTTCGGACTTTA+AGG + chr6.4:3904475-3904494 MS.gene66975:CDS 40.0%
GATTGAAGAAGAGGATAGGA+AGG + chr6.4:3910001-3910020 MS.gene66975:CDS 40.0%
GGAACAACCCATATCTCAAA+AGG - chr6.4:3907657-3907676 None:intergenic 40.0%
GTGAGACTAAGTCCCTATTT+AGG + chr6.4:3909264-3909283 MS.gene66975:intron 40.0%
GTGCCTTAATCATACAGGAT+AGG + chr6.4:3907991-3908010 MS.gene66975:intron 40.0%
TAACAGGTGAACTCAGAACA+TGG + chr6.4:3908611-3908630 MS.gene66975:intron 40.0%
TACCTTTCATGTGCAAACAC+AGG - chr6.4:3909149-3909168 None:intergenic 40.0%
TAGGATTGATGTCTAGCCAT+AGG + chr6.4:3905989-3906008 MS.gene66975:intron 40.0%
TATATGTGTCAGTGTCGTGT+TGG + chr6.4:3905814-3905833 MS.gene66975:intron 40.0%
TATGGTAGAGGAGGATGTAT+AGG + chr6.4:3906417-3906436 MS.gene66975:intron 40.0%
TCACACAAACACTATGCATC+GGG - chr6.4:3906464-3906483 None:intergenic 40.0%
TCAGTTGTTAGTATCGTGTC+TGG - chr6.4:3905021-3905040 None:intergenic 40.0%
TCTGTTGCTCAAACAACCTA+GGG - chr6.4:3905698-3905717 None:intergenic 40.0%
TGACCAATGCAATACACACA+CGG - chr6.4:3904539-3904558 None:intergenic 40.0%
TGGCTTAGTGGAACTATTCT+AGG + chr6.4:3906085-3906104 MS.gene66975:intron 40.0%
TGGTAATTTCTTCCGTTTGG+AGG + chr6.4:3908824-3908843 MS.gene66975:intron 40.0%
TGTCAATATCCTGTATGCGA+TGG + chr6.4:3908652-3908671 MS.gene66975:intron 40.0%
TTCCGTTTGATGAACCGAAT+TGG + chr6.4:3904591-3904610 MS.gene66975:CDS 40.0%
TTCCTGTGTTTGCACATGAA+AGG + chr6.4:3909144-3909163 MS.gene66975:CDS 40.0%
TTCTGTTGCTCAAACAACCT+AGG - chr6.4:3905699-3905718 None:intergenic 40.0%
TTTACGGCTGTGTTTGTATG+GGG + chr6.4:3907042-3907061 MS.gene66975:intron 40.0%
! AAATAGCGGAAGCTACAAAG+TGG - chr6.4:3906865-3906884 None:intergenic 40.0%
! ACCAGTGTTGAAAGAACGAA+TGG - chr6.4:3904249-3904268 None:intergenic 40.0%
! ATTTAGGGCCCAATAGACAT+TGG + chr6.4:3908677-3908696 MS.gene66975:intron 40.0%
! CGGATCTAATCTGAAGTATC+TGG + chr6.4:3905618-3905637 MS.gene66975:intron 40.0%
! GTTTTTATGCAGTTCCAGTC+AGG - chr6.4:3908563-3908582 None:intergenic 40.0%
! TTGAAATTGTGTGGTTGGTG+GGG + chr6.4:3905344-3905363 MS.gene66975:intron 40.0%
! TTGAAATTGTGTGGTTGGTG+TGG + chr6.4:3905344-3905363 MS.gene66975:intron 40.0%
!! CTGTTAGAAATGGTGATGGA+TGG + chr6.4:3910142-3910161 MS.gene66975:CDS 40.0%
!! GTGATTGTTTTGCATCTCGA+AGG + chr6.4:3906480-3906499 MS.gene66975:intron 40.0%
!! TCATCGGTTTCCTGCAAAAA+GGG - chr6.4:3904380-3904399 None:intergenic 40.0%
!! TCGAGAGTATCTGCTGAATT+GGG + chr6.4:3909918-3909937 MS.gene66975:CDS 40.0%
!! TTGGTAGCCCAGATTTTTAC+TGG + chr6.4:3909539-3909558 MS.gene66975:intron 40.0%
!! TTTGGATGATGGGTTTGTGT+TGG + chr6.4:3904658-3904677 MS.gene66975:CDS 40.0%
!!! ATTTTGGGTTGCGAAAGAAG+TGG + chr6.4:3910036-3910055 MS.gene66975:CDS 40.0%
!!! ATTTTTTTGAAGGCGCATGG+TGG + chr6.4:3909723-3909742 MS.gene66975:intron 40.0%
!!! GTTTTGAGGAGTTTGGATGA+TGG + chr6.4:3904647-3904666 MS.gene66975:CDS 40.0%
!!! TTTTTTTGAAGGCGCATGGT+GGG + chr6.4:3909724-3909743 MS.gene66975:intron 40.0%
AAAACCTCGCCAACATCCTT+CGG - chr6.4:3904770-3904789 None:intergenic 45.0%
AAGCCGTGTGTGTATTGCAT+TGG + chr6.4:3904533-3904552 MS.gene66975:CDS 45.0%
AAGTGGCGAAGAGAAGTCTT+TGG + chr6.4:3910242-3910261 MS.gene66975:CDS 45.0%
ACACACGGCTTATTCCTACT+AGG - chr6.4:3904524-3904543 None:intergenic 45.0%
ACCTTGTTGCTGAGTGCTTA+AGG - chr6.4:3906247-3906266 None:intergenic 45.0%
ACTTCCTACTTTCAGCAGCA+TGG - chr6.4:3906283-3906302 None:intergenic 45.0%
AGAACAAGCTGTGGTGTAAC+AGG + chr6.4:3908595-3908614 MS.gene66975:intron 45.0%
AGAATCTTTGCAGCATCCTC+AGG - chr6.4:3909110-3909129 None:intergenic 45.0%
AGACGGGCAGAAACATTGTT+TGG - chr6.4:3907510-3907529 None:intergenic 45.0%
AGTATCGTGTCTATCGTGTC+TGG - chr6.4:3905271-3905290 None:intergenic 45.0%
ATGAGAACCAAAACCGTTGG+TGG + chr6.4:3904192-3904211 MS.gene66975:CDS 45.0%
ATTCACACTAGTCCATTGCG+TGG + chr6.4:3908975-3908994 MS.gene66975:CDS 45.0%
CATTGCATGCCAAGTGAACA+AGG - chr6.4:3906062-3906081 None:intergenic 45.0%
CCAAGCTCAAAACCAGTTGT+CGG - chr6.4:3909059-3909078 None:intergenic 45.0%
CCTAAATGTCCATCGCATAC+AGG - chr6.4:3908664-3908683 None:intergenic 45.0%
CCTGTATGCGATGGACATTT+AGG + chr6.4:3908661-3908680 MS.gene66975:intron 45.0%
CTCTGCACACTTCCATGAAT+TGG + chr6.4:3907686-3907705 MS.gene66975:CDS 45.0%
GAGTCAAGCCTAGACATTGT+TGG + chr6.4:3909520-3909539 MS.gene66975:intron 45.0%
GATGCAACAGCTGAATTTGG+TGG + chr6.4:3908519-3908538 MS.gene66975:intron 45.0%
GATTGAAAGTCCGGTGCATT+CGG + chr6.4:3904724-3904743 MS.gene66975:CDS 45.0%
GCTTTACGGCTGTGTTTGTA+TGG + chr6.4:3907040-3907059 MS.gene66975:intron 45.0%
GGCACGTGACAATTAGAACT+TGG - chr6.4:3908058-3908077 None:intergenic 45.0%
GTCACTATCAGTATCGTGTC+TGG - chr6.4:3905280-3905299 None:intergenic 45.0%
GTGACTCTTTGTGTCAGCTT+AGG + chr6.4:3909237-3909256 MS.gene66975:intron 45.0%
GTGTGCATTGTTCGTCCTTA+AGG - chr6.4:3906146-3906165 None:intergenic 45.0%
GTTAGTATCGTGTCTGGTGT+CGG - chr6.4:3905015-3905034 None:intergenic 45.0%
GTTCCAGTCAGGTCATCTAA+CGG - chr6.4:3908552-3908571 None:intergenic 45.0%
TAACAGGTCTTCCTCTCAGT+CGG - chr6.4:3910128-3910147 None:intergenic 45.0%
TAAGCACTCAGCAACAAGGT+CGG + chr6.4:3906247-3906266 MS.gene66975:intron 45.0%
TAATATCACCCCATCGTGTC+TGG - chr6.4:3905224-3905243 None:intergenic 45.0%
TCCACTCTACCAACCTAACA+GGG - chr6.4:3905922-3905941 None:intergenic 45.0%
TCCTTAAGCACTCAGCAACA+AGG + chr6.4:3906243-3906262 MS.gene66975:intron 45.0%
TGATGCATTCACCACCAAAG+AGG + chr6.4:3909780-3909799 MS.gene66975:CDS 45.0%
TGCCCGTCTTGGAAATATGA+AGG + chr6.4:3907521-3907540 MS.gene66975:CDS 45.0%
TGCGACACTGACAATGTAGA+TGG + chr6.4:3905530-3905549 MS.gene66975:intron 45.0%
TGGAAAGTGAACGTAGTGTG+TGG + chr6.4:3910162-3910181 MS.gene66975:CDS 45.0%
TGTTCACTTGGCATGCAATG+AGG + chr6.4:3906062-3906081 MS.gene66975:intron 45.0%
TTACAGGCACTTGATCTTGG+AGG + chr6.4:3908888-3908907 MS.gene66975:intron 45.0%
TTCACACATCTGCCTTTGTG+TGG + chr6.4:3908106-3908125 MS.gene66975:intron 45.0%
TTCAGCAGATACTCTCGAGT+AGG - chr6.4:3909916-3909935 None:intergenic 45.0%
TTCCACTCTACCAACCTAAC+AGG - chr6.4:3905923-3905942 None:intergenic 45.0%
TTGTAGCTTCCGCTATTTGC+TGG + chr6.4:3906867-3906886 MS.gene66975:intron 45.0%
! AACAATGTTTCTGCCCGTCT+TGG + chr6.4:3907510-3907529 MS.gene66975:CDS 45.0%
! ATACTGATAGTGACACCGAC+AGG + chr6.4:3905408-3905427 MS.gene66975:intron 45.0%
! CACGATACTGATAGTGACAC+CGG + chr6.4:3905282-3905301 MS.gene66975:intron 45.0%
! CATCAATCCTGTTTTGCCTG+AGG + chr6.4:3909091-3909110 MS.gene66975:CDS 45.0%
! CTTTTTGCAGGAAACCGATG+AGG + chr6.4:3904379-3904398 MS.gene66975:intron 45.0%
! GATAGTGGCTAAGAGCATGA+TGG + chr6.4:3908349-3908368 MS.gene66975:intron 45.0%
! GTGCTTCACATCACTGACTA+TGG + chr6.4:3907225-3907244 MS.gene66975:intron 45.0%
! TCAGTGTCGTGTTGGTGTTT+GGG + chr6.4:3905822-3905841 MS.gene66975:intron 45.0%
! TGTAAGTGTTGTGTCGGTGT+CGG + chr6.4:3905598-3905617 MS.gene66975:intron 45.0%
! TTGAGATATGGGTTGTTCCC+CGG + chr6.4:3907658-3907677 MS.gene66975:CDS 45.0%
! TTGGTAGAGTGGAAGCATGT+TGG + chr6.4:3905929-3905948 MS.gene66975:intron 45.0%
!! ACAATGGCGGATTGAAGAAG+AGG + chr6.4:3909992-3910011 MS.gene66975:CDS 45.0%
!! CATCGGTTTCCTGCAAAAAG+GGG - chr6.4:3904379-3904398 None:intergenic 45.0%
!! CTCATCGGTTTCCTGCAAAA+AGG - chr6.4:3904381-3904400 None:intergenic 45.0%
!! CTCGAGAGTATCTGCTGAAT+TGG + chr6.4:3909917-3909936 MS.gene66975:CDS 45.0%
!! GATGATGGGTTTGTGTTGGA+TGG + chr6.4:3904662-3904681 MS.gene66975:CDS 45.0%
!! GTTCCTTAGTGGGAGGTATT+TGG + chr6.4:3906313-3906332 MS.gene66975:intron 45.0%
!!! ACTGGTTTTGAGCTTGGAAC+TGG + chr6.4:3909062-3909081 MS.gene66975:CDS 45.0%
!!! CTGGTTTTGAGCTTGGAACT+GGG + chr6.4:3909063-3909082 MS.gene66975:CDS 45.0%
!!! GAATGGGAGTGTCGTTTTGA+AGG - chr6.4:3904277-3904296 None:intergenic 45.0%
!!! GTGAGGTTTTGGATGGGTTT+GGG + chr6.4:3904687-3904706 MS.gene66975:CDS 45.0%
!! AAAAAATTGAAAAAAAAATT+AGG - chr6.4:3904315-3904334 None:intergenic 5.0%
!! AAAAATTGAAAAAAAAATTA+GGG - chr6.4:3904314-3904333 None:intergenic 5.0%
!!! ATAGAAATTTTAAATTTTTA+GGG + chr6.4:3904907-3904926 MS.gene66975:intron 5.0%
!!! TATAGAAATTTTAAATTTTT+AGG + chr6.4:3904906-3904925 MS.gene66975:intron 5.0%
!!! TTCTATTAATTTTTATTTTT+AGG + chr6.4:3909885-3909904 MS.gene66975:intron 5.0%
AACAACTGCTCCGAATGCAC+CGG - chr6.4:3904737-3904756 None:intergenic 50.0%
AAGTGTGCAGAGTGATACCG+GGG - chr6.4:3907678-3907697 None:intergenic 50.0%
ACTAGTCCATTGCGTGGTGA+TGG + chr6.4:3908981-3909000 MS.gene66975:CDS 50.0%
AGCACAGTGAGTCGTGATAG+TGG + chr6.4:3908334-3908353 MS.gene66975:intron 50.0%
AGCGTGGCTCAATTACTGAG+AGG - chr6.4:3906772-3906791 None:intergenic 50.0%
AGTAGGAAGAATGTGCGGAG+TGG + chr6.4:3905959-3905978 MS.gene66975:intron 50.0%
AGTCCGTTAGATGACCTGAC+TGG + chr6.4:3908546-3908565 MS.gene66975:intron 50.0%
AGTGACACCGGCAATGTATC+TGG + chr6.4:3905294-3905313 MS.gene66975:intron 50.0%
CAAGGCTTGACATCACCCAA+AGG - chr6.4:3906363-3906382 None:intergenic 50.0%
CAGAGCTGGCATACAGTCAT+TGG + chr6.4:3909006-3909025 MS.gene66975:CDS 50.0%
CATGCAATGAGGTGGCTTAG+TGG + chr6.4:3906073-3906092 MS.gene66975:intron 50.0%
CTAGTCCATTGCGTGGTGAT+GGG + chr6.4:3908982-3909001 MS.gene66975:CDS 50.0%
CTGCCTTTGTGTGGTAAACC+TGG + chr6.4:3908115-3908134 MS.gene66975:intron 50.0%
CTGGGCTACCAACAATGTCT+AGG - chr6.4:3909531-3909550 None:intergenic 50.0%
GAAGTGTGCAGAGTGATACC+GGG - chr6.4:3907679-3907698 None:intergenic 50.0%
GATGCATTAGCTCGCAAGAC+TGG + chr6.4:3910078-3910097 MS.gene66975:CDS 50.0%
GATTTGACGCCGAAGGATGT+TGG + chr6.4:3904758-3904777 MS.gene66975:CDS 50.0%
GCTTCCTTGTTGCTGCCTTA+AGG + chr6.4:3906128-3906147 MS.gene66975:intron 50.0%
GGAACCATGCTGCTGAAAGT+AGG + chr6.4:3906276-3906295 MS.gene66975:intron 50.0%
GGTTGTTGAGAGTCCGAATC+CGG + chr6.4:3904622-3904641 MS.gene66975:CDS 50.0%
GTGTCTATCGTGTCTGGTGT+CGG - chr6.4:3905265-3905284 None:intergenic 50.0%
GTTGTTGGATTTGACGCCGA+AGG + chr6.4:3904751-3904770 MS.gene66975:CDS 50.0%
TCACTTGGCATGCAATGAGG+TGG + chr6.4:3906065-3906084 MS.gene66975:intron 50.0%
TCCAAACTCCTCAAAACCGC+CGG - chr6.4:3904644-3904663 None:intergenic 50.0%
TCGTCCTTAAGGCAGCAACA+AGG - chr6.4:3906135-3906154 None:intergenic 50.0%
TGAATTGGGCACGAGCCATT+GGG + chr6.4:3909932-3909951 MS.gene66975:CDS 50.0%
TGTGCGGAGTGGTATACCTT+AGG + chr6.4:3905970-3905989 MS.gene66975:intron 50.0%
TTGGAACAATTGGCAAGCCC+AGG - chr6.4:3907491-3907510 None:intergenic 50.0%
! GATGGGTTTGTGTTGGATGG+CGG + chr6.4:3904665-3904684 MS.gene66975:CDS 50.0%
! GGAAGTGTGCAGAGTGATAC+CGG - chr6.4:3907680-3907699 None:intergenic 50.0%
! GTCAGTGTCGTGTTGGTGTT+TGG + chr6.4:3905821-3905840 MS.gene66975:intron 50.0%
! TCGTGTTGGTGTTTGGGCAT+TGG + chr6.4:3905828-3905847 MS.gene66975:intron 50.0%
! TGTCTGGTGTCAGTGCTTCA+TGG - chr6.4:3905208-3905227 None:intergenic 50.0%
!! ACCCTGTTAGGTTGGTAGAG+TGG + chr6.4:3905918-3905937 MS.gene66975:intron 50.0%
!! GAGCTTTGGAGAACAAGCTG+TGG + chr6.4:3908586-3908605 MS.gene66975:intron 50.0%
!! GGCGGATTGAAGAAGAGGAT+AGG + chr6.4:3909997-3910016 MS.gene66975:CDS 50.0%
!!! ATGGCGGTGAGGTTTTGGAT+GGG + chr6.4:3904681-3904700 MS.gene66975:CDS 50.0%
!!! CCGACAACTGGTTTTGAGCT+TGG + chr6.4:3909056-3909075 MS.gene66975:CDS 50.0%
!!! CTGCACCAGCTTTTTCACCA+TGG - chr6.4:3907443-3907462 None:intergenic 50.0%
!!! GGTGAGGTTTTGGATGGGTT+TGG + chr6.4:3904686-3904705 MS.gene66975:CDS 50.0%
AAACCCGTGCTCTCTCCCAA+TGG - chr6.4:3909950-3909969 None:intergenic 55.0%
AAGGGAATGAAGGCAGAGCG+TGG - chr6.4:3906788-3906807 None:intergenic 55.0%
ACATATGCCGGTCGGCTAAG+TGG + chr6.4:3910225-3910244 MS.gene66975:CDS 55.0%
CACTGACACCAGACACGATG+GGG + chr6.4:3905213-3905232 MS.gene66975:intron 55.0%
CCAGTTGTCGGAATCAGCTG+AGG - chr6.4:3909047-3909066 None:intergenic 55.0%
CTCCTCAAAACCGCCGGATT+CGG - chr6.4:3904638-3904657 None:intergenic 55.0%
CTGAATTGGGCACGAGCCAT+TGG + chr6.4:3909931-3909950 MS.gene66975:CDS 55.0%
GCAGCATCCTCAGGCAAAAC+AGG - chr6.4:3909101-3909120 None:intergenic 55.0%
GGTCTTCCTCTCAGTCGGAA+TGG - chr6.4:3910123-3910142 None:intergenic 55.0%
GGTGCATTCGGAGCAGTTGT+TGG + chr6.4:3904736-3904755 MS.gene66975:CDS 55.0%
TCTGACCCATCACCACGCAA+TGG - chr6.4:3908990-3909009 None:intergenic 55.0%
TGTTGAGAGTCCGAATCCGG+CGG + chr6.4:3904625-3904644 MS.gene66975:CDS 55.0%
! ATGGGCTGAGCTGAGCAACA+AGG - chr6.4:3906381-3906400 None:intergenic 55.0%
! CAGCAACAAGGTCGGCTTAG+TGG + chr6.4:3906255-3906274 MS.gene66975:intron 55.0%
! CCTCAGCTGATTCCGACAAC+TGG + chr6.4:3909044-3909063 MS.gene66975:CDS 55.0%
! GCACTGACACCAGACACGAT+GGG + chr6.4:3905212-3905231 MS.gene66975:intron 55.0%
! GCGTTTGCCACCAACGGTTT+TGG - chr6.4:3904202-3904221 None:intergenic 55.0%
! GTTTGTGTTGGATGGCGGTG+AGG + chr6.4:3904670-3904689 MS.gene66975:CDS 55.0%
!! AGCACTGACACCAGACACGA+TGG + chr6.4:3905211-3905230 MS.gene66975:intron 55.0%
!! GTTGGATGGCGGTGAGGTTT+TGG + chr6.4:3904676-3904695 MS.gene66975:CDS 55.0%
!!! GATGGCGGTGAGGTTTTGGA+TGG + chr6.4:3904680-3904699 MS.gene66975:CDS 55.0%
!!! TCCGGCGGTTTTGAGGAGTT+TGG + chr6.4:3904640-3904659 MS.gene66975:CDS 55.0%
CGAACGGCGTTTGCCACCAA+CGG - chr6.4:3904208-3904227 None:intergenic 60.0%
CGAGCCATTGGGAGAGAGCA+CGG + chr6.4:3909943-3909962 MS.gene66975:CDS 60.0%
CTCTTCGCCACTTAGCCGAC+CGG - chr6.4:3910235-3910254 None:intergenic 60.0%
GGGTGTCCATTCCGACTGAG+AGG + chr6.4:3910114-3910133 MS.gene66975:CDS 60.0%
! GAGCCATTGGGAGAGAGCAC+GGG + chr6.4:3909944-3909963 MS.gene66975:CDS 60.0%
! GCGATCGGGAGCACATATGC+CGG + chr6.4:3910213-3910232 MS.gene66975:CDS 60.0%
! GTCCGAATCCGGCGGTTTTG+AGG + chr6.4:3904633-3904652 MS.gene66975:CDS 60.0%
! TCGGGAGCACATATGCCGGT+CGG + chr6.4:3910217-3910236 MS.gene66975:CDS 60.0%
!! GTTTGGGCATTGGCACGCGT+CGG + chr6.4:3905838-3905857 MS.gene66975:intron 60.0%
CATTGGCACGCGTCGGAGTC+TGG + chr6.4:3905845-3905864 MS.gene66975:intron 65.0%
GACGCCGAAGGATGTTGGCG+AGG + chr6.4:3904763-3904782 MS.gene66975:CDS 65.0%
!! GCGTGGTGATGGGTCAGAGC+TGG + chr6.4:3908992-3909011 MS.gene66975:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 3904192 3910422 3904192 ID=MS.gene66975
chr6.4 mRNA 3904192 3910422 3904192 ID=MS.gene66975.t1;Parent=MS.gene66975
chr6.4 exon 3904192 3904266 3904192 ID=MS.gene66975.t1.exon1;Parent=MS.gene66975.t1
chr6.4 CDS 3904192 3904266 3904192 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
chr6.4 exon 3904389 3904850 3904389 ID=MS.gene66975.t1.exon2;Parent=MS.gene66975.t1
chr6.4 CDS 3904389 3904850 3904389 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
chr6.4 exon 3907429 3907719 3907429 ID=MS.gene66975.t1.exon3;Parent=MS.gene66975.t1
chr6.4 CDS 3907429 3907719 3907429 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
chr6.4 exon 3908894 3909165 3908894 ID=MS.gene66975.t1.exon4;Parent=MS.gene66975.t1
chr6.4 CDS 3908894 3909165 3908894 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
chr6.4 exon 3909735 3909801 3909735 ID=MS.gene66975.t1.exon5;Parent=MS.gene66975.t1
chr6.4 CDS 3909735 3909801 3909735 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
chr6.4 exon 3909907 3910422 3909907 ID=MS.gene66975.t1.exon6;Parent=MS.gene66975.t1
chr6.4 CDS 3909907 3910422 3909907 ID=cds.MS.gene66975.t1;Parent=MS.gene66975.t1
Gene Sequence

>MS.gene66975

ATGAGAACCAAAACCGTTGGTGGCAAACGCCGTTCGTTAATCAACCCTAATTCACCATTCGTTCTTTCAACACTGGTAAGTACCTTCAAAACGACACTCCCATTCATCGTTTTCATTAACCCTAATTTTTTTTTCAATTTTTTTGAAATTTTTGAAATTTTTGAAACCCTAACCCTAATTTTCACCCCTTTTTGCAGGAAACCGATGAGGAAGAAGATCCAAATCCAATTTACCGAAAATCAACTGTTTGGAATGAATGGGTTATCTTCAAGCAAGATAAAACGAAGAAAGCTTCGGACTTTAAGGGGAAATCGACGTATAATACGAATCCTAGTAGGAATAAGCCGTGTGTGTATTGCATTGGTCATGAAGATGAATGTAGTGAGGAGATTTTTAGGGTTCCGTTTGATGAACCGAATTGGAAGATTAGGGTTGTTGAGAGTCCGAATCCGGCGGTTTTGAGGAGTTTGGATGATGGGTTTGTGTTGGATGGCGGTGAGGTTTTGGATGGGTTTGGGATTCATGATGTTGTGATTGAAAGTCCGGTGCATTCGGAGCAGTTGTTGGATTTGACGCCGAAGGATGTTGGCGAGGTTTTTGTTGCTTTCAGTAATAGGATCAGAGAATTGGTTCATCTTGAGTCTATCAAATATGTTCAGGTTTGTTTTTTTTGTGGATTTGGATTTTTTGTTTTGTTAAAGTTTTGATTTTTATTATAGAAATTTTAAATTTTTAGGGTTTATAATTGTTGTTTTATAGGAAAATTGGTGATTTGAGAGTAATGAAAGTGAATGTGATACTGGTCGTTATCTATGAAGCACCGACACCAGACACGATACTAACAACTGACCGCGACATTGACAATGTATCTGTTTTCAATAAATATTAGTGAATATTTTTTAAACAATGAAATGAAATGTAATTACTACAATGGAACGTTTTTTATCTGACCAGAGAATAGGTGATTTGAGAGTATGAAATTGTGTAGTTGGTGTGGTGATATTAGTCGATATCCATGAAGCACTGACACCAGACACGATGGGGTGATATTAGTCGTTATCTATGAAGCACCGACACCAGACACGATAGACACGATACTGATAGTGACACCGGCAATGTATCTGGTTTGAATAAATAGTAGCACTATCTGTTTTGAAATTGTGTGGTTGGTGGGGTGATATTAGTTGTTATCTACGAAGCACTGACACCAGACACGATACTGATAGTGACACCGACAGGTTTGAATAAATAGTAGTACTATCTGTTTTGAAATTGTGTGGTTGGTGTGGTGATATTTGTCTTCATCTATGAAGCACAGACACTAGACATGATATTGATTGCGACACTGACAATGTAGATGGTGATAATAATTTCAGAAAATGGAAGTGATTAAATGTATCTATATGTGTAAGTGTTGTGTCGGTGTCGGATCTAATCTGAAGTATCTGGACATGACTTTAATTGGAAGTGTCAATGGTATGTATTATGCACTTGATAAATAAACCCTAGGTTGTTTGAGCAACAGAATTCAAGAACTTGTTATCCTTTTGAGTCTATCAAAAACGTTCAAGGACTTTTAAAAAAAATAAAATAATTGAATTTTGTTGTTGATTAAATGTAACTATATGTGTCAGTGTCGTGTTGGTGTTTGGGCATTGGCACGCGTCGGAGTCTGGACACGATTTCAGTTTTGAAGTGTTAGTGTCAGTGTGTACTTGATAGATAAACCCTGTTAGGTTGGTAGAGTGGAAGCATGTTGGATATGCAAGTAGGAAGAATGTGCGGAGTGGTATACCTTAGGATTGATGTCTAGCCATAGGTAATGTGAGAGTAGTGAGATTTTTCTCTCTTGTTTGGTGATATTAGTCCTTGTTCACTTGGCATGCAATGAGGTGGCTTAGTGGAACTATTCTAGGTCTGCTAGTAACAAGAGTGTGCTTCCTTGTTGCTGCCTTAAGGACGAACAATGCACACAATTGATAATGGATGTGTGGTCATTTTGGAATAGGTAATGTGAGAGAGTAGTCGAACTTTTTCTAGTTGGTGATGAGTCCTTAAGCACTCAGCAACAAGGTCGGCTTAGTGGAACCATGCTGCTGAAAGTAGGAAGTGTAAAGATATGTTCCTTAGTGGGAGGTATTTGGTTTGATTCATTGTGAAAAATAAATCCTTTGGGTGATGTCAAGCCTTGTTGCTCAGCTCAGCCCATCTCGAACAAGATTAACTATGGTAGAGGAGGATGTATAGGGATACAAGTGGTCAGTTTTCACCCGATGCATAGTGTTTGTGTGATTGTTTTGCATCTCGAAGGCTAATGTGATAATTTTGAAGTAAGCCTTCAATATAAGTGGGGGTTATATATTCATCCCTGAAAGAAGAAATTATCACACCAGTTCTTACAATAATGTAATTTGTTAGTTAAGTAAAGCCTCTGGGACTTATTTTCTTAATTTCATTCAGTATTTTCTAAAATAATAAACTGAAGAATATGCATGTTTGCCAATTAGGACCTATTCATAAATTTTAGAAACCGAATGGTCAATGAGTATTACTTATATATTCACCGTAATATGTAAACCTCTCAGTAATTGAGCCACGCTCTGCCTTCATTCCCTTTTTTATTTGTATTCAGTGTGCCTTTACTTTACATATATAATTGACTTATTTCAACCACTTTGTAGCTTCCGCTATTTGCTGGCAACACTATTTGCCATCTAACATAGCAGATTTTTGGCGTTCCGCTATTGATAACATTGATTTCACTATCTATTCCTTGTAAATTTTGTGTCCCTTGTTGTAAAAGTTCTTATCTTCTTCAAAAGTTATGTGAGCTTGAATCTTTTTGGCTGCTTTACGGCTGTGTTTGTATGGGGTTTGACACTTCTAATATGAAAGTAGGAAGTTTTGATATACTACTTTTTATTTTATTTGCAGTGTGCTGTAGTAAGCTATGATTTATGATCTAGGCATATTATAATTGTTATTTGACTTTGGGTAATGAGAGCATCTGAGCAAGTAAGCAGTGTTGCTTGTGTGCTTCACATCACTGACTATGGTTCTATTTACTTTTACAGTTTTAGTTATTATTTTCTACAATAAGACTAATAATTGCAGTTAACCTAGTCTTGCCTTGTTCTGTATAAATATAAATATAAATATATTATGACTGTTGTCTTCTTCTGGCACCTGTTTCATGTAATTTGTCATTTCTAAACTTGATTTTATTAATCTTTGAAGGTGTTTAAAAACCATGGTGAAAAAGCTGGTGCAGCGATGAGTCATTCTCATAGTCAAATCCTGGGCTTGCCAATTGTTCCAAACAATGTTTCTGCCCGTCTTGGAAATATGAAGGATTTTTTTTATCAGACAGGGAAGTGCTGTATTTGTGACATTCAACTTGAGGATCTTTTGATTGATTCATCTTCCTACTTCTTTTCATTGGTTCCGTTTGCTGCTTCATTTCCTTTTGAGATATGGGTTGTTCCCCGGTATCACTCTGCACACTTCCATGAATTGGATGATGAAATGGTAACAATTCATTCTATGCAAAGTCCTATTTATGTTGAAATGCAAAATGTGTAGTTTGATTATAATGTAAATGCATCTCGTATCACACATGATTTAAAGGCTTTGTATTAGTTGTTTTGTGAGACTTGCAGCTGATTGTTAGATGCTACTATGCTAGATCTTTTATAAGGGTGATTACATGCGACACACGTGACAGAAGCACATTGAAAAATTAAATAAGAAATGGTGTTTGAATGTCATGGTATTTTAGAATATAGTTGTATTATATTTGGTGCCTTAATCATACAGGATAGGACATAAATTTTGATTAGGAATTATAGTATAACACGGAGATGCCAAGTTCTAATTGTCACGTGCCTTCAAATGTAACTGAATAACAAATGTTTTTCACACATCTGCCTTTGTGTGGTAAACCTGGATTGTGTTATGTTGTGTTTCAAATTTAATATTTATGAACAAATTAAAAATATAACTCCATTTCAATTTATCATTCAAAGTTTTAGTTAACCATAAAATGCATCACAGTCTTGAATCATGACCTATTTTTTTCTCGAAACTATGAAATAATTCAGCAGTCTAGGTGTTATCAGAAATATGTGAATGTTAGGGGGATAAGCACAGTGAGTCGTGATAGTGGCTAAGAGCATGATGGAGAGTGTTTTGACAGTGAAAGACAGTACAGAAACTGAATAATACAACTAACAAGCATCATAAAACTTCTGGTTGGGAAGAACCCTATGTTTATTAATCTGTGAAAAAACGAGAATAAATATAGTGGAAGAAAATAAAAGGTTCAACAGATGCAACAGCTGAATTTGGTGGTCACAGTCCGTTAGATGACCTGACTGGAACTGCATAAAAACTCTGAGCTTTGGAGAACAAGCTGTGGTGTAACAGGTGAACTCAGAACATGGCAATAATTAGCAAGAGGATGTCAATATCCTGTATGCGATGGACATTTAGGGCCCAATAGACATTGGAATTATGAGGATTTATCATAATAGTACTTGCTGATTCAACATACTCGTTACTCATAGCTTGAGCTATAGACACAGTTTTGGATTTTGCAATGCATTGCACACTATTACCAACTATATATACATGTGGTAATTTCTTCCGTTTGGAGGTTATTGTCTAAAAGGCTGACCATTATATCTTGACATTTATTTTACAGGCACTTGATCTTGGAGGTTTGATGAGAACCACTCTTAGAAAGATGTCTTTTCAATTGAACAATCCGCCATACAACTTTATGATTCACACTAGTCCATTGCGTGGTGATGGGTCAGAGCTGGCATACAGTCATTGGTTTATACAGATAATACCTCAGCTGATTCCGACAACTGGTTTTGAGCTTGGAACTGGGTCTCACATCAATCCTGTTTTGCCTGAGGATGCTGCAAAGATTCTAAGAGAAGTGATTGTTCCTGTGTTTGCACATGAAAGGTATGAAATTTACTCGGTGACCTAATTTCAAACTTGTCTGCTGATAAAATATTTATTTCAATTTATTGTAAGTGACTCTTTGTGTCAGCTTAGGCGCTGTGAGACTAAGTCCCTATTTAGGTGCATTTGAGAGAATTGATTCTCCTAAGTTCTTGACATCAAATAATCAAATGGTTGCTGTCTTTAGTTACTGCTAATTATAATATTAGCATCTTGATTGAAATATGGACTATGGAGAATCATTTAGACATGTAATATTGTCGGTTCCTCCTTTTCACGTTATTCATATACTTTTTTTAATTTATCTATCATTACATGGATACGAGAAGAGGAAGAGATTAGAACACAGTAAATGAGTCAAGCCTAGACATTGTTGGTAGCCCAGATTTTTACTGGATTTAAATTCCAAAAGTTTATCAAGTGTTATGGCATTGGAATTTAAATTCTGGGAGTTCATTATCTCTTTAAGTTTTGAGATTTGGTTTTTGGAAGTTTATTTTTTGTTTTGTAGTGAAATTTAGTTTCTGAGAGTTTATTTTAAGGTGGTGTATTGTTAAATTTTTTTGAAGGCGCATGGTGGGATTTTTACCTCCAACTAAGATTGTGGATTATAGTGATGCATTCACCACCAAAGAGGTAATTGAATTCTGAATTTTTTTTTTTTTTTTTTAAGGAAAAGTTATTGTTGTCATGTTATGATGATTCTGTGAACATAATAGTTCTATTAATTTTTATTTTTAGGTGTTTCCTACTCGAGAGTATCTGCTGAATTGGGCACGAGCCATTGGGAGAGAGCACGGGTTTACTGTTATCATTCAAAGATCAGACAATGGCGGATTGAAGAAGAGGATAGGAAGGAAAACAACTGTGATTTTGGGTTGCGAAAGAAGTGGAAAATATAGACAATACAAGGATGCATTAGCTCGCAAGACTGGAACAAAGAAATGTGGGTGTCCATTCCGACTGAGAGGAAGACCTGTTAGAAATGGTGATGGATGGAAAGTGAACGTAGTGTGTGGATTTCACAACCATGAAGTAATTGAAACTGCGATCGGGAGCACATATGCCGGTCGGCTAAGTGGCGAAGAGAAGTCTTTGGTCGATGATCTGACAAGAAGCAATTACAAACCGAAAGACATATTACAGACATTGAAAGAACGTAATGAAGAGAATCTCACTTCTATCAAGCAGATTTATAATTTGCGCCAACAGCTAAAACGTTCTAGATTAGAATTAGAAATGGAAAATTCGGCATAG

Protein sequence

>MS.gene66975.t1

MRTKTVGGKRRSLINPNSPFVLSTLETDEEEDPNPIYRKSTVWNEWVIFKQDKTKKASDFKGKSTYNTNPSRNKPCVYCIGHEDECSEEIFRVPFDEPNWKIRVVESPNPAVLRSLDDGFVLDGGEVLDGFGIHDVVIESPVHSEQLLDLTPKDVGEVFVAFSNRIRELVHLESIKYVQVFKNHGEKAGAAMSHSHSQILGLPIVPNNVSARLGNMKDFFYQTGKCCICDIQLEDLLIDSSSYFFSLVPFAASFPFEIWVVPRYHSAHFHELDDEMALDLGGLMRTTLRKMSFQLNNPPYNFMIHTSPLRGDGSELAYSHWFIQIIPQLIPTTGFELGTGSHINPVLPEDAAKILREVIVPVFAHERRMVGFLPPTKIVDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDALARKTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGEEKSLVDDLTRSNYKPKDILQTLKERNEENLTSIKQIYNLRQQLKRSRLELEMENSA