Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71705.t1 | XP_013470094.1 | 95.6 | 768 | 33 | 1 | 1 | 768 | 1 | 767 | 0.00E+00 | 1196.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71705.t1 | Q2TBE0 | 27.9 | 706 | 367 | 21 | 194 | 765 | 196 | 893 | 3.2e-51 | 204.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71705.t1 | A0A072VQQ5 | 95.6 | 768 | 33 | 1 | 1 | 768 | 1 | 767 | 0.0e+00 | 1196.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene71705 | 0.833573 | 4.94E-56 | -1.69E-46 |
| MS.gene049159 | MS.gene71705 | 0.857339 | 1.75E-62 | -1.69E-46 |
| MS.gene049254 | MS.gene71705 | 0.820983 | 5.14E-53 | -1.69E-46 |
| MS.gene049343 | MS.gene71705 | 0.831794 | 1.36E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene71705 | 0.809456 | 1.88E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene71705 | 0.842466 | 2.54E-58 | -1.69E-46 |
| MS.gene049452 | MS.gene71705 | 0.801123 | 1.04E-48 | -1.69E-46 |
| MS.gene049850 | MS.gene71705 | 0.80336 | 3.62E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene71705 | 0.82752 | 1.49E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene71705 | 0.833684 | 4.63E-56 | -1.69E-46 |
| MS.gene050799 | MS.gene71705 | 0.806882 | 6.63E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene71705 | 0.840029 | 1.11E-57 | -1.69E-46 |
| MS.gene051365 | MS.gene71705 | 0.823944 | 1.05E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene71705 | 0.804852 | 1.77E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene71705 | 0.822998 | 1.75E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene71705 | 0.801657 | 8.12E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene71705 | 0.838879 | 2.21E-57 | -1.69E-46 |
| MS.gene052518 | MS.gene71705 | 0.820968 | 5.18E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene71705 | 0.852626 | 4.08E-61 | -1.69E-46 |
| MS.gene052582 | MS.gene71705 | 0.801619 | 8.27E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene71705 | 0.815762 | 7.83E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene71705 | 0.818668 | 1.74E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene71705 | 0.834503 | 2.89E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene71705 | 0.862577 | 4.59E-64 | -1.69E-46 |
| MS.gene052896 | MS.gene71705 | 0.817393 | 3.38E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene71705 | 0.868418 | 6.63E-66 | -1.69E-46 |
| MS.gene053079 | MS.gene71705 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene71705 | 0.855045 | 8.21E-62 | -1.69E-46 |
| MS.gene053541 | MS.gene71705 | 0.802738 | 4.87E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene71705 | 0.81317 | 2.93E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene71705 | 0.824507 | 7.78E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene71705 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene054142 | MS.gene71705 | 0.813271 | 2.79E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene71705 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene71705 | 0.826703 | 2.35E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene71705 | 0.861116 | 1.29E-63 | -1.69E-46 |
| MS.gene054657 | MS.gene71705 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene71705 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene054939 | MS.gene71705 | 0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene71705 | 0.825731 | 3.99E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene71705 | 0.814042 | 1.88E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene71705 | 0.814894 | 1.22E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene71705 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene055694 | MS.gene71705 | 0.825083 | 5.69E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene71705 | 0.844434 | 7.58E-59 | -1.69E-46 |
| MS.gene055841 | MS.gene71705 | 0.815805 | 7.66E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene71705 | 0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene71705 | 0.802052 | 6.73E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene71705 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene71705 | 0.80962 | 1.73E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene71705 | 0.820473 | 6.73E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene71705 | 0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene71705 | 0.844189 | 8.82E-59 | -1.69E-46 |
| MS.gene05690 | MS.gene71705 | 0.823225 | 1.55E-53 | -1.69E-46 |
| MS.gene057034 | MS.gene71705 | 0.81715 | 3.83E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene71705 | 0.809127 | 2.21E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene71705 | 0.863676 | 2.10E-64 | -1.69E-46 |
| MS.gene057444 | MS.gene71705 | 0.816972 | 4.20E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene71705 | 0.833841 | 4.23E-56 | -1.69E-46 |
| MS.gene057693 | MS.gene71705 | 0.807076 | 6.03E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene71705 | 0.835074 | 2.07E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene71705 | 0.847154 | 1.38E-59 | -1.69E-46 |
| MS.gene058008 | MS.gene71705 | 0.818646 | 1.76E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene71705 | 0.841853 | 3.69E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene71705 | 0.811243 | 7.72E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene71705 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene71705 | 0.8075 | 4.90E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene71705 | 0.840632 | 7.74E-58 | -1.69E-46 |
| MS.gene058781 | MS.gene71705 | 0.846353 | 2.29E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene71705 | 0.861253 | 1.17E-63 | -1.69E-46 |
| MS.gene058829 | MS.gene71705 | 0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene71705 | 0.847825 | 9.05E-60 | -1.69E-46 |
| MS.gene059151 | MS.gene71705 | 0.801447 | 8.97E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene71705 | 0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene05978 | MS.gene71705 | 0.818544 | 1.85E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene71705 | 0.860448 | 2.05E-63 | -1.69E-46 |
| MS.gene060310 | MS.gene71705 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene71705 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene71705 | 0.873917 | 1.01E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene71705 | 0.853596 | 2.15E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71705.t1 | MTR_1g107575 | 96.484 | 768 | 26 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1522 |
| MS.gene71705.t1 | MTR_4g126260 | 24.111 | 253 | 185 | 5 | 508 | 759 | 356 | 602 | 1.97e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71705.t1 | AT1G56290 | 58.805 | 636 | 226 | 12 | 151 | 765 | 72 | 692 | 0.0 | 731 |
| MS.gene71705.t1 | AT5G56900 | 25.472 | 318 | 212 | 11 | 450 | 759 | 200 | 500 | 2.22e-15 | 80.1 |
| MS.gene71705.t1 | AT5G56900 | 25.472 | 318 | 212 | 11 | 450 | 759 | 101 | 401 | 3.59e-15 | 79.0 |
| MS.gene71705.t1 | AT5G56900 | 25.472 | 318 | 212 | 11 | 450 | 759 | 293 | 593 | 4.26e-15 | 79.7 |
Find 173 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACCACTTCTTCTTTC+TGG | 0.127155 | 1.1:-77353306 | None:intergenic |
| AATGCAGAACAAGCAGTTTA+AGG | 0.165236 | 1.1:+77357347 | MS.gene71705:CDS |
| TAAATCTAGAAAATGCTTTC+TGG | 0.175819 | 1.1:+77353003 | None:intergenic |
| GATAATGAATCTTGCACTTT+AGG | 0.203429 | 1.1:-77356390 | None:intergenic |
| AGATGGCAGTGATGGTTCTT+TGG | 0.217013 | 1.1:+77353475 | MS.gene71705:CDS |
| AAAAGAGGCAACGTTCTTTC+TGG | 0.231869 | 1.1:-77357494 | None:intergenic |
| CTATCCAACGGGATTCTAAA+AGG | 0.246272 | 1.1:+77356176 | MS.gene71705:CDS |
| TTCTATCGTCCTCCCTTGTT+GGG | 0.271017 | 1.1:+77355585 | MS.gene71705:CDS |
| AGCCTCTTTAGCAACATCTT+TGG | 0.273963 | 1.1:-77358290 | None:intergenic |
| TTAACTCCATCCCTTTCTTC+TGG | 0.275995 | 1.1:-77355545 | None:intergenic |
| CCAAATTCTACATGAAAATA+AGG | 0.288504 | 1.1:-77359965 | None:intergenic |
| GTCAAAATGATCCCAGTCTT+TGG | 0.291825 | 1.1:-77360152 | None:intergenic |
| GCCTCTTTAGCAACATCTTT+GGG | 0.302529 | 1.1:-77358289 | None:intergenic |
| ATCAGATATTAGGAGGAAAA+AGG | 0.309597 | 1.1:+77353208 | MS.gene71705:CDS |
| TAACTCCGATGGCTCTGTTT+TGG | 0.313770 | 1.1:+77356542 | MS.gene71705:CDS |
| CTTCTATCGTCCTCCCTTGT+TGG | 0.323231 | 1.1:+77355584 | MS.gene71705:CDS |
| ACAAGATGCATAGGCCGATT+TGG | 0.336873 | 1.1:-77357528 | None:intergenic |
| CGATATTGCAAGAAAAGAAA+TGG | 0.349250 | 1.1:+77353571 | MS.gene71705:CDS |
| ACTCGTATCAATGAGTCTTT+TGG | 0.351937 | 1.1:-77359906 | None:intergenic |
| CTGACCTTCTTAAAGTATAA+AGG | 0.363032 | 1.1:-77358313 | None:intergenic |
| AAATCTAGAAAATGCTTTCT+GGG | 0.367835 | 1.1:+77353004 | None:intergenic |
| TTAAATAAATTTGCTAATGA+TGG | 0.373787 | 1.1:+77356483 | MS.gene71705:CDS |
| GATGGCAGTGATGGTTCTTT+GGG | 0.376486 | 1.1:+77353476 | MS.gene71705:CDS |
| AAGGAGTTTAAGAGTAGTCT+TGG | 0.378970 | 1.1:+77360025 | MS.gene71705:CDS |
| TAACTCCATCCCTTTCTTCT+GGG | 0.389734 | 1.1:-77355544 | None:intergenic |
| CTTCCATCATCCTTTAGATA+AGG | 0.393080 | 1.1:-77355515 | None:intergenic |
| CATTAGAGGCATGCTGCATT+TGG | 0.401828 | 1.1:+77360057 | MS.gene71705:CDS |
| AGAAATTAAACTCACGTGAA+TGG | 0.401995 | 1.1:-77357628 | None:intergenic |
| CTTGGGTTGAATGTCATTAG+AGG | 0.406348 | 1.1:+77360043 | MS.gene71705:CDS |
| CAGTGGCAGCCCGTGGTGCC+TGG | 0.410325 | 1.1:+77357588 | MS.gene71705:CDS |
| CACCCTCAGCTACAGCAAAC+TGG | 0.415469 | 1.1:-77356431 | None:intergenic |
| GATATTGCCAGAGGAGGTTC+CGG | 0.417230 | 1.1:+77353652 | MS.gene71705:CDS |
| AAAGAGGCAACGTTCTTTCT+GGG | 0.420692 | 1.1:-77357493 | None:intergenic |
| AAGTGCAAGATTCATTATCT+TGG | 0.421374 | 1.1:+77356394 | MS.gene71705:CDS |
| GGAGAAAGGTGGGGTTCTCT+TGG | 0.424757 | 1.1:+77356037 | MS.gene71705:CDS |
| TCCTTTGTTTCTGAAACAGC+TGG | 0.426347 | 1.1:-77353629 | None:intergenic |
| CAAAAGTCACGTACAAAAGA+TGG | 0.426378 | 1.1:+77353515 | MS.gene71705:CDS |
| GCCAGAGGAGGTTCCGGTTG+AGG | 0.427345 | 1.1:+77353658 | MS.gene71705:CDS |
| CTTTAGGTGCTTTCATTTCA+CGG | 0.429416 | 1.1:-77356374 | None:intergenic |
| CTAAGACATACCTCCTCAAC+CGG | 0.430215 | 1.1:-77353671 | None:intergenic |
| GCATGGCCTTAGCTGCCAAC+TGG | 0.432433 | 1.1:-77356650 | None:intergenic |
| TCCTCAACCGGAACCTCCTC+TGG | 0.432540 | 1.1:-77353659 | None:intergenic |
| TAAAGCAGCTGCACCAGCTC+GGG | 0.436695 | 1.1:+77356084 | MS.gene71705:CDS |
| TGGATAGGCTTATCAGAATC+TGG | 0.438375 | 1.1:-77356160 | None:intergenic |
| TCTTCTTCAGATGGCAGTGA+TGG | 0.448835 | 1.1:+77353467 | MS.gene71705:CDS |
| GAAATTAAACTCACGTGAAT+GGG | 0.449576 | 1.1:-77357627 | None:intergenic |
| GGCTCCTTTATACTTTAAGA+AGG | 0.451038 | 1.1:+77358309 | MS.gene71705:CDS |
| TCGTCCTCCCTTGTTGGGGA+TGG | 0.451524 | 1.1:+77355590 | MS.gene71705:CDS |
| TTAGCAACATCTTTGGGTAC+AGG | 0.452375 | 1.1:-77358283 | None:intergenic |
| ATGAAAATAAGGAAAGTCCT+TGG | 0.453332 | 1.1:-77359954 | None:intergenic |
| TGCAAACCAGTTGGCAGCTA+AGG | 0.457599 | 1.1:+77356644 | MS.gene71705:CDS |
| AGATAAGGATTCAATTCCTT+AGG | 0.459784 | 1.1:-77355500 | None:intergenic |
| TTCTGATAAGCCTATCCAAC+GGG | 0.465145 | 1.1:+77356165 | MS.gene71705:CDS |
| ACCCAAAGATGTTGCTAAAG+AGG | 0.465690 | 1.1:+77358288 | MS.gene71705:CDS |
| TGCAAGAAAAGAAATGGGAT+TGG | 0.466865 | 1.1:+77353577 | MS.gene71705:CDS |
| AACTCTACAAACCTGGTCAC+GGG | 0.470379 | 1.1:-77353040 | None:intergenic |
| TGGGATTGGATTGGATGCTT+AGG | 0.475574 | 1.1:+77353591 | MS.gene71705:CDS |
| AGGGAAGTTCTAGTTCTAGA+AGG | 0.477096 | 1.1:+77356958 | MS.gene71705:CDS |
| TGAAGAAGCTGATAGACTAA+TGG | 0.482397 | 1.1:+77356695 | MS.gene71705:CDS |
| GAAAAGAAATGGGATTGGAT+TGG | 0.486728 | 1.1:+77353582 | MS.gene71705:CDS |
| TGAAAATAAGGAAAGTCCTT+GGG | 0.489950 | 1.1:-77359953 | None:intergenic |
| TCACCAGGTATGTCTACATC+TGG | 0.490912 | 1.1:-77356591 | None:intergenic |
| AATCCTTATCTAAAGGATGA+TGG | 0.493135 | 1.1:+77355512 | MS.gene71705:CDS |
| TGCTTAGGTCTGAAAGTAAG+AGG | 0.494397 | 1.1:+77353606 | MS.gene71705:CDS |
| ACAGGTTGTGGGAGAAAGGT+GGG | 0.494592 | 1.1:+77356027 | MS.gene71705:intron |
| AGGAGTTTAAGAGTAGTCTT+GGG | 0.500080 | 1.1:+77360026 | MS.gene71705:CDS |
| ACGGTCAAGGAGTGGTAAAA+AGG | 0.500765 | 1.1:+77353421 | MS.gene71705:CDS |
| GATATTGCAAGAAAAGAAAT+GGG | 0.506087 | 1.1:+77353572 | MS.gene71705:CDS |
| GGAATTGAATCCTTATCTAA+AGG | 0.506348 | 1.1:+77355505 | MS.gene71705:CDS |
| CTAGGTACAAGATGAGGACT+TGG | 0.508187 | 1.1:+77353154 | MS.gene71705:intron |
| GAAATTCATTCCCCGTGACC+AGG | 0.508309 | 1.1:+77353029 | MS.gene71705:CDS |
| TCTTGAAACTGTGATGGGAT+TGG | 0.510705 | 1.1:+77358225 | MS.gene71705:CDS |
| ACAAGATGAGGACTTGGATA+AGG | 0.511436 | 1.1:+77353160 | MS.gene71705:CDS |
| ACGTACAGGTTGTGGGAGAA+AGG | 0.512724 | 1.1:+77356023 | MS.gene71705:intron |
| TCCTTTCAAACGAAGTTGCA+TGG | 0.513085 | 1.1:-77356667 | None:intergenic |
| GCCATGCAACTTCGTTTGAA+AGG | 0.516217 | 1.1:+77356666 | MS.gene71705:CDS |
| TCCTCCCTTGTTGGGGATGG+AGG | 0.516820 | 1.1:+77355593 | MS.gene71705:CDS |
| CTAAAGCAGCTGCACCAGCT+CGG | 0.518101 | 1.1:+77356083 | MS.gene71705:CDS |
| GAAGTGGTTACCCAGAAGAA+AGG | 0.519164 | 1.1:+77355534 | MS.gene71705:CDS |
| GCCTTCGTTTCTTATCATCC+CGG | 0.519609 | 1.1:-77353373 | None:intergenic |
| CCATGTTATTGATGATGAAA+AGG | 0.522343 | 1.1:+77360006 | MS.gene71705:CDS |
| GCCAGCTGTTTCAGAAACAA+AGG | 0.526710 | 1.1:+77353628 | MS.gene71705:CDS |
| ATATCTTCTGAGCAGAAGAA+AGG | 0.527325 | 1.1:+77357288 | MS.gene71705:CDS |
| TTGGATTCTCTAGACAAAAG+AGG | 0.527728 | 1.1:-77357509 | None:intergenic |
| GCAGTTTAAGGTTTATACTC+AGG | 0.528525 | 1.1:+77357359 | MS.gene71705:CDS |
| ACGTCAAAGGTACGAGAAAG+TGG | 0.530885 | 1.1:+77360099 | MS.gene71705:CDS |
| TATCCAACGGGATTCTAAAA+GGG | 0.536857 | 1.1:+77356177 | MS.gene71705:CDS |
| CAACTGAAAGTGAAAGCGAC+CGG | 0.538228 | 1.1:+77353354 | MS.gene71705:CDS |
| TTGGTGGGCAGGAAGAGGCA+AGG | 0.538902 | 1.1:+77356883 | MS.gene71705:intron |
| GTCAAAGAAGGCAAATCCTA+AGG | 0.538930 | 1.1:+77355484 | MS.gene71705:intron |
| TGGTGGGCAGGAAGAGGCAA+GGG | 0.540113 | 1.1:+77356884 | MS.gene71705:intron |
| GTAGAATTTGGTCTAAACAA+AGG | 0.541254 | 1.1:+77359977 | MS.gene71705:CDS |
| GAAGACTCTTCTTCTTCAGA+TGG | 0.541678 | 1.1:+77353458 | MS.gene71705:CDS |
| GCAGCAACGGAGGCATTGCA+TGG | 0.542294 | 1.1:+77358249 | MS.gene71705:CDS |
| CAGCAATGACCAGGCACCAC+GGG | 0.542710 | 1.1:-77357597 | None:intergenic |
| TGATGGGATTGGCGCAGCAA+CGG | 0.543497 | 1.1:+77358236 | MS.gene71705:CDS |
| TTTGTCTAGAGAATCCAAAT+CGG | 0.546300 | 1.1:+77357514 | MS.gene71705:CDS |
| TTCATTTCACGGTCCCGAGA+AGG | 0.548726 | 1.1:-77356363 | None:intergenic |
| TATGGATACGTACAGGTTGT+GGG | 0.551919 | 1.1:+77356016 | MS.gene71705:intron |
| CTCATTGATACGAGTCAGAA+GGG | 0.552831 | 1.1:+77359914 | MS.gene71705:CDS |
| AGGCATGCTGCATTTGGCTG+AGG | 0.559862 | 1.1:+77360063 | MS.gene71705:CDS |
| TAACTCTACAAACCTGGTCA+CGG | 0.560136 | 1.1:-77353041 | None:intergenic |
| AAGTGGTTACCCAGAAGAAA+GGG | 0.560758 | 1.1:+77355535 | MS.gene71705:CDS |
| TATCTAAAGGATGATGGAAG+TGG | 0.562789 | 1.1:+77355518 | MS.gene71705:CDS |
| TCTATCGTCCTCCCTTGTTG+GGG | 0.563715 | 1.1:+77355586 | MS.gene71705:CDS |
| GAAATTAGATCAAGAACTGA+GGG | 0.565433 | 1.1:+77356939 | MS.gene71705:CDS |
| CTTATCAAGCTGATCATCAT+CGG | 0.566051 | 1.1:-77353270 | None:intergenic |
| TGATAAGAAACGAAGGCGGA+AGG | 0.566477 | 1.1:+77353379 | MS.gene71705:CDS |
| TATGCGTGAGTTAGTTAGCA+AGG | 0.567223 | 1.1:+77356512 | MS.gene71705:CDS |
| GATGAATATGACTTTGAGAC+TGG | 0.570613 | 1.1:+77357387 | MS.gene71705:CDS |
| ATGGTTCTTTGGGTCGCCAA+CGG | 0.574425 | 1.1:+77353486 | MS.gene71705:CDS |
| AAGATATGTGAAATTTGCAA+TGG | 0.574800 | 1.1:-77357556 | None:intergenic |
| TTGCTCCTCCATCCCCAACA+AGG | 0.579676 | 1.1:-77355598 | None:intergenic |
| GCATGTAGATGAGCCCGAGC+TGG | 0.580752 | 1.1:-77356097 | None:intergenic |
| TACAGGTTGTGGGAGAAAGG+TGG | 0.581114 | 1.1:+77356026 | MS.gene71705:intron |
| AGTGTTTCTTGAAACTGTGA+TGG | 0.581708 | 1.1:+77358219 | MS.gene71705:CDS |
| AACTGAAAGTGAAAGCGACC+GGG | 0.581958 | 1.1:+77353355 | MS.gene71705:CDS |
| CTATAAGAAGCAGACAAAGA+GGG | 0.582737 | 1.1:+77356119 | MS.gene71705:CDS |
| AAGCCAGTTTGCTGTAGCTG+AGG | 0.582994 | 1.1:+77356428 | MS.gene71705:CDS |
| TTGGGGATGGAGGAGCAAGT+TGG | 0.583549 | 1.1:+77355603 | MS.gene71705:CDS |
| AGAAAAGAGATGGACGGTCA+AGG | 0.584062 | 1.1:+77353408 | MS.gene71705:CDS |
| TGGGATTGGCGCAGCAACGG+AGG | 0.587679 | 1.1:+77358239 | MS.gene71705:CDS |
| TTGATGAAGCAGAAGATGAG+TGG | 0.593008 | 1.1:+77359870 | MS.gene71705:CDS |
| ACTCATTGATACGAGTCAGA+AGG | 0.593762 | 1.1:+77359913 | MS.gene71705:CDS |
| AAAAGTCACGTACAAAAGAT+GGG | 0.596199 | 1.1:+77353516 | MS.gene71705:CDS |
| ACTTTCCAAAACAGAGCCAT+CGG | 0.600722 | 1.1:-77356547 | None:intergenic |
| GCTATAAGAAGCAGACAAAG+AGG | 0.602039 | 1.1:+77356118 | MS.gene71705:CDS |
| AGCCAGTTTGCTGTAGCTGA+GGG | 0.602459 | 1.1:+77356429 | MS.gene71705:CDS |
| AGCGGAGAGAACAAGATCAA+AGG | 0.603131 | 1.1:+77353539 | MS.gene71705:CDS |
| AACGGTGGATGATAATGTGT+GGG | 0.603348 | 1.1:+77358135 | MS.gene71705:CDS |
| AAGGGTCCAGAAAGAAGAAG+TGG | 0.604306 | 1.1:+77353300 | MS.gene71705:CDS |
| GATAAGAAACGAAGGCGGAA+GGG | 0.605462 | 1.1:+77353380 | MS.gene71705:CDS |
| TGCTCCTCCATCCCCAACAA+GGG | 0.605665 | 1.1:-77355597 | None:intergenic |
| CAAGAGCAAGCAGCTCGAGA+AGG | 0.610525 | 1.1:+77355650 | MS.gene71705:CDS |
| TGAAATTAGATCAAGAACTG+AGG | 0.611462 | 1.1:+77356938 | MS.gene71705:CDS |
| ATGGACACAACAAGATGCAT+AGG | 0.612176 | 1.1:-77357537 | None:intergenic |
| TAACATGAGTGCAAACCAGT+TGG | 0.614285 | 1.1:+77356635 | MS.gene71705:CDS |
| TCTCCAGATGTAGACATACC+TGG | 0.614683 | 1.1:+77356588 | MS.gene71705:CDS |
| AATCTAGAAAATGCTTTCTG+GGG | 0.620178 | 1.1:+77353005 | None:intergenic |
| ATTCAAGGTATGCTATGCAG+AGG | 0.622462 | 1.1:+77357265 | MS.gene71705:intron |
| TCACGTACAAAAGATGGGAG+CGG | 0.624007 | 1.1:+77353521 | MS.gene71705:CDS |
| AGAGGAGGTTCCGGTTGAGG+AGG | 0.624945 | 1.1:+77353661 | MS.gene71705:CDS |
| CATATCTTATGTTGCCACAG+TGG | 0.629694 | 1.1:+77357571 | MS.gene71705:CDS |
| GGCACCACGGGCTGCCACTG+TGG | 0.630244 | 1.1:-77357585 | None:intergenic |
| GTGTTTCTTGAAACTGTGAT+GGG | 0.635016 | 1.1:+77358220 | MS.gene71705:CDS |
| GTTTAAGGTTTATACTCAGG+CGG | 0.637491 | 1.1:+77357362 | MS.gene71705:CDS |
| TTTACGCAACTCAATTCCCA+AGG | 0.639849 | 1.1:+77359937 | MS.gene71705:CDS |
| GTTGCCACAGTGGCAGCCCG+TGG | 0.646274 | 1.1:+77357581 | MS.gene71705:CDS |
| TCCTCCATCCCCAACAAGGG+AGG | 0.647544 | 1.1:-77355594 | None:intergenic |
| TATAAGAAGCAGACAAAGAG+GGG | 0.648201 | 1.1:+77356120 | MS.gene71705:CDS |
| ACTCTACAAACCTGGTCACG+GGG | 0.649268 | 1.1:-77353039 | None:intergenic |
| GGTTACCCAGAAGAAAGGGA+TGG | 0.651690 | 1.1:+77355539 | MS.gene71705:CDS |
| GCATGAATCAGCTACAAGAA+CGG | 0.655856 | 1.1:+77358117 | MS.gene71705:intron |
| GAAAGGGATGGAGTTAACGT+TGG | 0.656584 | 1.1:+77355551 | MS.gene71705:CDS |
| AAAGGAGATATTGCCAGAGG+AGG | 0.656762 | 1.1:+77353646 | MS.gene71705:CDS |
| AGAGATGGACGGTCAAGGAG+TGG | 0.659421 | 1.1:+77353413 | MS.gene71705:CDS |
| AAGGAGAGTAGTAACTCCGA+TGG | 0.660069 | 1.1:+77356531 | MS.gene71705:CDS |
| GGTAAAATACAGCAATGACC+AGG | 0.660836 | 1.1:-77357606 | None:intergenic |
| ATTCTGATAAGCCTATCCAA+CGG | 0.661452 | 1.1:+77356164 | MS.gene71705:CDS |
| TTCTGAGCAGAAGAAAGGAG+AGG | 0.665761 | 1.1:+77357293 | MS.gene71705:CDS |
| CAGGTTGTGGGAGAAAGGTG+GGG | 0.667439 | 1.1:+77356028 | MS.gene71705:intron |
| AAGACATGTATAGACGTCAA+AGG | 0.668527 | 1.1:+77360086 | MS.gene71705:CDS |
| TATATACTAGGTACAAGATG+AGG | 0.672250 | 1.1:+77353148 | MS.gene71705:intron |
| ACAGCAATGACCAGGCACCA+CGG | 0.673584 | 1.1:-77357598 | None:intergenic |
| AACAAAGGAGATATTGCCAG+AGG | 0.685554 | 1.1:+77353643 | MS.gene71705:CDS |
| TGAATCAGCTACAAGAACGG+TGG | 0.687115 | 1.1:+77358120 | MS.gene71705:CDS |
| ACCGGGATGATAAGAAACGA+AGG | 0.693258 | 1.1:+77353372 | MS.gene71705:CDS |
| AGAAGGACGAAGCTGCCAAG+AGG | 0.694798 | 1.1:+77355667 | MS.gene71705:CDS |
| AAGAGTAGAAAGAAGCAAGG+AGG | 0.698813 | 1.1:+77357420 | MS.gene71705:CDS |
| GAACGGTGGATGATAATGTG+TGG | 0.714664 | 1.1:+77358134 | MS.gene71705:CDS |
| ACGGTGGATGATAATGTGTG+GGG | 0.723750 | 1.1:+77358136 | MS.gene71705:CDS |
| TCAAAGGTACGAGAAAGTGG+AGG | 0.744298 | 1.1:+77360102 | MS.gene71705:CDS |
| GGGATGATAAGAAACGAAGG+CGG | 0.769963 | 1.1:+77353375 | MS.gene71705:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77353015 | 77360204 | 77353015 | ID=MS.gene71705 |
| chr1.1 | mRNA | 77353015 | 77360204 | 77353015 | ID=MS.gene71705.t1;Parent=MS.gene71705 |
| chr1.1 | exon | 77353015 | 77353050 | 77353015 | ID=MS.gene71705.t1.exon1;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77353015 | 77353050 | 77353015 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77353158 | 77353682 | 77353158 | ID=MS.gene71705.t1.exon2;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77353158 | 77353682 | 77353158 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77355485 | 77355688 | 77355485 | ID=MS.gene71705.t1.exon3;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77355485 | 77355688 | 77355485 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77356031 | 77356198 | 77356031 | ID=MS.gene71705.t1.exon4;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77356031 | 77356198 | 77356031 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77356345 | 77356716 | 77356345 | ID=MS.gene71705.t1.exon5;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77356345 | 77356716 | 77356345 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77356894 | 77356979 | 77356894 | ID=MS.gene71705.t1.exon6;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77356894 | 77356979 | 77356894 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77357272 | 77357635 | 77357272 | ID=MS.gene71705.t1.exon7;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77357272 | 77357635 | 77357272 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77358118 | 77358330 | 77358118 | ID=MS.gene71705.t1.exon8;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77358118 | 77358330 | 77358118 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| chr1.1 | exon | 77359866 | 77360204 | 77359866 | ID=MS.gene71705.t1.exon9;Parent=MS.gene71705.t1 |
| chr1.1 | CDS | 77359866 | 77360204 | 77359866 | ID=cds.MS.gene71705.t1;Parent=MS.gene71705.t1 |
| Gene Sequence |
| Protein sequence |
