Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71925.t1 | PNX79454.1 | 96.6 | 118 | 4 | 0 | 1 | 118 | 14 | 131 | 2.00E-44 | 188.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71925.t1 | P14009 | 65.5 | 84 | 29 | 0 | 35 | 118 | 54 | 137 | 1.9e-24 | 113.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71925.t1 | A0A2K3LLP0 | 96.6 | 118 | 4 | 0 | 1 | 118 | 14 | 131 | 1.4e-44 | 188.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene71925 | -0.80938 | 1.95E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene71925 | 0.818276 | 2.13E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene71925 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene71925 | -0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene71925 | 0.843449 | 1.39E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene71925 | -0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene71925 | -0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene050710 | MS.gene71925 | 0.824512 | 7.75E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene71925 | -0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene050809 | MS.gene71925 | 0.811689 | 6.17E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene71925 | -0.809129 | 2.20E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene71925 | -0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene71925 | -0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene71925 | -0.8376 | 4.73E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene71925 | -0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene71925 | 0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene71925 | 0.805863 | 1.09E-49 | -1.69E-46 |
| MS.gene052702 | MS.gene71925 | 0.82084 | 5.55E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene71925 | -0.803071 | 4.15E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene71925 | -0.801301 | 9.60E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene71925 | -0.813718 | 2.22E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene71925 | -0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene054181 | MS.gene71925 | 0.810695 | 1.01E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene71925 | 0.808487 | 3.02E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene71925 | 0.814664 | 1.37E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene71925 | -0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene71925 | 0.832683 | 8.22E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene71925 | 0.863123 | 3.12E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene71925 | -0.807256 | 5.52E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene71925 | -0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene71925 | -0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene055731 | MS.gene71925 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene71925 | -0.81303 | 3.15E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene71925 | -0.804829 | 1.79E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene71925 | -0.817297 | 3.55E-52 | -1.69E-46 |
| MS.gene056283 | MS.gene71925 | -0.809377 | 1.95E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene71925 | -0.824241 | 8.98E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene71925 | -0.804987 | 1.66E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene71925 | 0.834626 | 2.69E-56 | -1.69E-46 |
| MS.gene056591 | MS.gene71925 | 0.833267 | 5.88E-56 | -1.69E-46 |
| MS.gene05666 | MS.gene71925 | -0.811925 | 5.48E-51 | -1.69E-46 |
| MS.gene056678 | MS.gene71925 | 0.805116 | 1.56E-49 | -1.69E-46 |
| MS.gene056688 | MS.gene71925 | 0.822013 | 2.97E-53 | -1.69E-46 |
| MS.gene056694 | MS.gene71925 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene71925 | 0.857281 | 1.82E-62 | -1.69E-46 |
| MS.gene056856 | MS.gene71925 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene71925 | -0.80885 | 2.53E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene71925 | 0.80757 | 4.74E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene71925 | -0.802789 | 4.75E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene71925 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene71925 | -0.80318 | 3.94E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene71925 | 0.812032 | 5.20E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene71925 | -0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene71925 | -0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene71925 | -0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene058158 | MS.gene71925 | 0.813038 | 3.13E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene71925 | 0.811607 | 6.43E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene71925 | -0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene71925 | -0.827632 | 1.41E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene71925 | -0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene71925 | 0.857573 | 1.49E-62 | -1.69E-46 |
| MS.gene059328 | MS.gene71925 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene71925 | -0.800756 | 1.24E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene71925 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene71925 | 0.813533 | 2.44E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene71925 | -0.811775 | 5.92E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene71925 | 0.817217 | 3.70E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene71925 | -0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene71925 | 0.814803 | 1.28E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene71925 | 0.825848 | 3.75E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene71925 | -0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene71925 | -0.801687 | 8.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71925.t1 | MTR_4g101310 | 97.458 | 118 | 3 | 0 | 1 | 118 | 17 | 134 | 9.85e-79 | 228 |
| MS.gene71925.t1 | MTR_4g101330 | 49.342 | 152 | 42 | 2 | 1 | 117 | 17 | 168 | 5.76e-39 | 128 |
| MS.gene71925.t1 | MTR_4g101280 | 67.045 | 88 | 29 | 0 | 31 | 118 | 56 | 143 | 8.22e-38 | 125 |
| MS.gene71925.t1 | MTR_1g012710 | 61.628 | 86 | 32 | 1 | 33 | 118 | 67 | 151 | 1.57e-34 | 117 |
| MS.gene71925.t1 | MTR_1g012690 | 56.190 | 105 | 37 | 3 | 14 | 118 | 59 | 154 | 1.67e-34 | 117 |
| MS.gene71925.t1 | MTR_1g012700 | 50.442 | 113 | 47 | 2 | 14 | 118 | 53 | 164 | 1.92e-32 | 112 |
| MS.gene71925.t1 | MTR_3g106740 | 62.353 | 85 | 30 | 2 | 34 | 117 | 46 | 129 | 3.57e-31 | 107 |
| MS.gene71925.t1 | MTR_1g012630 | 58.140 | 86 | 35 | 1 | 33 | 118 | 126 | 210 | 7.22e-31 | 109 |
| MS.gene71925.t1 | MTR_4g108150 | 47.899 | 119 | 53 | 3 | 1 | 118 | 13 | 123 | 1.00e-30 | 106 |
| MS.gene71925.t1 | MTR_2g026760 | 52.101 | 119 | 50 | 5 | 1 | 118 | 15 | 127 | 1.23e-30 | 106 |
| MS.gene71925.t1 | MTR_4g101260 | 58.824 | 85 | 34 | 1 | 34 | 118 | 49 | 132 | 1.59e-29 | 103 |
| MS.gene71925.t1 | MTR_5g012340 | 50.575 | 87 | 42 | 1 | 31 | 117 | 91 | 176 | 5.13e-26 | 96.3 |
| MS.gene71925.t1 | MTR_5g012380 | 50.575 | 87 | 42 | 1 | 31 | 117 | 84 | 169 | 6.73e-26 | 95.5 |
| MS.gene71925.t1 | MTR_3g106750 | 54.762 | 84 | 38 | 0 | 35 | 118 | 46 | 129 | 2.58e-25 | 92.8 |
| MS.gene71925.t1 | MTR_4g101270 | 51.765 | 85 | 40 | 1 | 33 | 117 | 103 | 186 | 3.39e-24 | 91.7 |
| MS.gene71925.t1 | MTR_2g026920 | 44.444 | 81 | 42 | 1 | 38 | 118 | 118 | 195 | 6.48e-17 | 72.8 |
| MS.gene71925.t1 | MTR_2g026930 | 44.444 | 81 | 42 | 1 | 38 | 118 | 122 | 199 | 8.89e-17 | 72.8 |
| MS.gene71925.t1 | MTR_3g082100 | 45.977 | 87 | 46 | 1 | 31 | 117 | 250 | 335 | 4.97e-16 | 72.4 |
| MS.gene71925.t1 | MTR_2g026775 | 48.101 | 79 | 35 | 2 | 42 | 118 | 686 | 760 | 5.32e-14 | 67.0 |
| MS.gene71925.t1 | MTR_2g026820 | 49.367 | 79 | 34 | 3 | 40 | 117 | 542 | 615 | 9.88e-14 | 66.2 |
| MS.gene71925.t1 | MTR_4g115360 | 44.444 | 90 | 49 | 1 | 29 | 118 | 145 | 233 | 1.49e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71925.t1 | AT1G12100 | 56.780 | 118 | 49 | 1 | 1 | 118 | 17 | 132 | 1.61e-39 | 129 |
| MS.gene71925.t1 | AT1G62510 | 66.667 | 84 | 28 | 0 | 34 | 117 | 66 | 149 | 5.51e-36 | 120 |
| MS.gene71925.t1 | AT4G12500 | 57.955 | 88 | 37 | 0 | 31 | 118 | 90 | 177 | 1.55e-34 | 117 |
| MS.gene71925.t1 | AT4G12490 | 56.989 | 93 | 40 | 0 | 26 | 118 | 90 | 182 | 9.58e-34 | 115 |
| MS.gene71925.t1 | AT4G12520 | 61.364 | 88 | 34 | 0 | 31 | 118 | 42 | 129 | 1.30e-33 | 114 |
| MS.gene71925.t1 | AT4G12510 | 61.364 | 88 | 34 | 0 | 31 | 118 | 42 | 129 | 1.30e-33 | 114 |
| MS.gene71925.t1 | AT2G45180 | 63.529 | 85 | 30 | 1 | 34 | 118 | 51 | 134 | 2.09e-33 | 113 |
| MS.gene71925.t1 | AT4G22460 | 55.769 | 104 | 45 | 1 | 13 | 116 | 29 | 131 | 5.79e-33 | 112 |
| MS.gene71925.t1 | AT1G12090 | 65.432 | 81 | 28 | 0 | 37 | 117 | 57 | 137 | 1.55e-32 | 111 |
| MS.gene71925.t1 | AT4G12480 | 55.682 | 88 | 39 | 0 | 31 | 118 | 81 | 168 | 2.24e-32 | 112 |
| MS.gene71925.t1 | AT4G12470 | 55.056 | 89 | 40 | 0 | 30 | 118 | 73 | 161 | 4.09e-32 | 111 |
| MS.gene71925.t1 | AT4G12550 | 49.495 | 99 | 48 | 2 | 21 | 118 | 14 | 111 | 2.38e-29 | 102 |
| MS.gene71925.t1 | AT4G00165 | 48.544 | 103 | 51 | 2 | 16 | 117 | 27 | 128 | 1.42e-27 | 98.6 |
| MS.gene71925.t1 | AT4G00165 | 48.544 | 103 | 51 | 2 | 16 | 117 | 27 | 128 | 1.42e-27 | 98.6 |
| MS.gene71925.t1 | AT5G46890 | 54.444 | 90 | 38 | 1 | 29 | 118 | 41 | 127 | 2.06e-27 | 98.2 |
| MS.gene71925.t1 | AT4G12530 | 54.945 | 91 | 40 | 1 | 27 | 117 | 26 | 115 | 1.07e-26 | 95.9 |
| MS.gene71925.t1 | AT5G46900 | 54.444 | 90 | 38 | 1 | 29 | 118 | 41 | 127 | 1.13e-26 | 96.3 |
| MS.gene71925.t1 | AT4G12545 | 49.495 | 99 | 45 | 3 | 21 | 118 | 14 | 108 | 5.46e-26 | 94.0 |
| MS.gene71925.t1 | AT3G22120 | 50.000 | 86 | 41 | 2 | 33 | 117 | 265 | 349 | 2.19e-19 | 82.0 |
| MS.gene71925.t1 | AT3G22120 | 50.000 | 86 | 41 | 2 | 33 | 117 | 248 | 332 | 3.63e-19 | 81.3 |
| MS.gene71925.t1 | AT3G22142 | 50.538 | 93 | 43 | 2 | 27 | 117 | 1387 | 1478 | 3.63e-18 | 79.3 |
| MS.gene71925.t1 | AT1G62500 | 46.429 | 84 | 44 | 1 | 34 | 117 | 211 | 293 | 1.04e-17 | 76.6 |
| MS.gene71925.t1 | AT2G10940 | 44.706 | 85 | 46 | 1 | 34 | 118 | 207 | 290 | 1.39e-17 | 76.3 |
| MS.gene71925.t1 | AT2G10940 | 44.706 | 85 | 46 | 1 | 34 | 118 | 207 | 290 | 1.39e-17 | 76.3 |
| MS.gene71925.t1 | AT4G15160 | 44.186 | 86 | 47 | 1 | 33 | 117 | 97 | 182 | 1.06e-16 | 72.4 |
| MS.gene71925.t1 | AT4G15160 | 44.186 | 86 | 47 | 1 | 33 | 117 | 179 | 264 | 3.26e-16 | 72.4 |
| MS.gene71925.t1 | AT4G22490 | 35.870 | 92 | 56 | 2 | 26 | 117 | 28 | 116 | 1.15e-11 | 57.8 |
Find 31 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGAGATGCACTTAAAT+TGG | 0.207740 | 8.3:-19882311 | MS.gene71925:CDS |
| AGGATCAAACTTAGTGAAAT+AGG | 0.251033 | 8.3:+19882127 | None:intergenic |
| GTGTGTGCTAATTTGCTTAA+TGG | 0.265220 | 8.3:-19882286 | MS.gene71925:CDS |
| AAGGGAATGGATTTGGATTA+GGG | 0.269618 | 8.3:+19882365 | None:intergenic |
| GCCAAGAATGTTAGCTTTGA+TGG | 0.271570 | 8.3:+19882165 | None:intergenic |
| CTTGGGTAAGGGAATGGATT+TGG | 0.286724 | 8.3:+19882358 | None:intergenic |
| TTTGGATTAGGGTTAGGTTT+TGG | 0.310537 | 8.3:+19882376 | None:intergenic |
| TAAGGGAATGGATTTGGATT+AGG | 0.323838 | 8.3:+19882364 | None:intergenic |
| GCCATCAAAGCTAACATTCT+TGG | 0.340537 | 8.3:-19882166 | MS.gene71925:CDS |
| ATAGAGCAACATGGATGTTC+TGG | 0.348478 | 8.3:+19882235 | None:intergenic |
| GAGTCTTCTCACAAGCATTA+AGG | 0.369143 | 8.3:+19882107 | None:intergenic |
| AATGGATTTGGATTAGGGTT+AGG | 0.406983 | 8.3:+19882370 | None:intergenic |
| GAAGGACTTGTGCTTGGGTA+AGG | 0.431525 | 8.3:+19882346 | None:intergenic |
| CCAAGAGATGCACTTAAATT+GGG | 0.431689 | 8.3:-19882310 | MS.gene71925:CDS |
| GGACCAATTGGTGCAGTGAT+TGG | 0.437596 | 8.3:-19882265 | MS.gene71925:CDS |
| CCCAATTTAAGTGCATCTCT+TGG | 0.455798 | 8.3:+19882310 | None:intergenic |
| GACCCAATCACTGCACCAAT+TGG | 0.459457 | 8.3:+19882262 | None:intergenic |
| TAGTGGAAGGACTTGTGCTT+GGG | 0.461750 | 8.3:+19882341 | None:intergenic |
| AATTTGCTTAATGGACCAAT+TGG | 0.477291 | 8.3:-19882277 | MS.gene71925:CDS |
| ATCTCTTGGACAACTCTTAG+TGG | 0.495008 | 8.3:+19882324 | None:intergenic |
| TTAGTGGAAGGACTTGTGCT+TGG | 0.502701 | 8.3:+19882340 | None:intergenic |
| CTTGTGCTTGGGTAAGGGAA+TGG | 0.504980 | 8.3:+19882352 | None:intergenic |
| GACCAATTGGTGCAGTGATT+GGG | 0.509536 | 8.3:-19882264 | MS.gene71925:CDS |
| TAACACTTAATTAAGAGCAC+TGG | 0.528966 | 8.3:+19882071 | None:intergenic |
| AAGGACTTGTGCTTGGGTAA+GGG | 0.591360 | 8.3:+19882347 | None:intergenic |
| TAAGAGCACTGGAAATCAGT+GGG | 0.619022 | 8.3:+19882082 | None:intergenic |
| CTTGGACAACTCTTAGTGGA+AGG | 0.619262 | 8.3:+19882328 | None:intergenic |
| CCTTCTAAAATAGAGCAACA+TGG | 0.620844 | 8.3:+19882226 | None:intergenic |
| TTAAGAGCACTGGAAATCAG+TGG | 0.653235 | 8.3:+19882081 | None:intergenic |
| GAGCACTGGAAATCAGTGGG+TGG | 0.693320 | 8.3:+19882085 | None:intergenic |
| GAGCAACATGGATGTTCTGG+TGG | 0.695269 | 8.3:+19882238 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGGATCAAACTTAGTGAAAT+AGG | + | chr8.3:19882372-19882391 | None:intergenic | 30.0% | |
| ! | AATTTGCTTAATGGACCAAT+TGG | - | chr8.3:19882219-19882238 | MS.gene71925:CDS | 30.0% |
| CCAAGAGATGCACTTAAATT+GGG | - | chr8.3:19882186-19882205 | MS.gene71925:CDS | 35.0% | |
| TCCAAGAGATGCACTTAAAT+TGG | - | chr8.3:19882185-19882204 | MS.gene71925:CDS | 35.0% | |
| ! | AAGGGAATGGATTTGGATTA+GGG | + | chr8.3:19882134-19882153 | None:intergenic | 35.0% |
| ! | AATGGATTTGGATTAGGGTT+AGG | + | chr8.3:19882129-19882148 | None:intergenic | 35.0% |
| ! | CTTTTCTTTGCAATGGCAAA+TGG | - | chr8.3:19882084-19882103 | MS.gene71925:CDS | 35.0% |
| ! | TAAGGGAATGGATTTGGATT+AGG | + | chr8.3:19882135-19882154 | None:intergenic | 35.0% |
| !! | CCATGTTGCTCTATTTTAGA+AGG | - | chr8.3:19882270-19882289 | MS.gene71925:CDS | 35.0% |
| !! | CCTTCTAAAATAGAGCAACA+TGG | + | chr8.3:19882273-19882292 | None:intergenic | 35.0% |
| !! | GTGTGTGCTAATTTGCTTAA+TGG | - | chr8.3:19882210-19882229 | MS.gene71925:CDS | 35.0% |
| !! | TTTGGATTAGGGTTAGGTTT+TGG | + | chr8.3:19882123-19882142 | None:intergenic | 35.0% |
| ATAGAGCAACATGGATGTTC+TGG | + | chr8.3:19882264-19882283 | None:intergenic | 40.0% | |
| ATCTCTTGGACAACTCTTAG+TGG | + | chr8.3:19882175-19882194 | None:intergenic | 40.0% | |
| CCCAATTTAAGTGCATCTCT+TGG | + | chr8.3:19882189-19882208 | None:intergenic | 40.0% | |
| GAGTCTTCTCACAAGCATTA+AGG | + | chr8.3:19882392-19882411 | None:intergenic | 40.0% | |
| GCCATCAAAGCTAACATTCT+TGG | - | chr8.3:19882330-19882349 | MS.gene71925:CDS | 40.0% | |
| !! | GCCAAGAATGTTAGCTTTGA+TGG | + | chr8.3:19882334-19882353 | None:intergenic | 40.0% |
| !! | TAAGAGCACTGGAAATCAGT+GGG | + | chr8.3:19882417-19882436 | None:intergenic | 40.0% |
| !! | TTAAGAGCACTGGAAATCAG+TGG | + | chr8.3:19882418-19882437 | None:intergenic | 40.0% |
| AAGGACTTGTGCTTGGGTAA+GGG | + | chr8.3:19882152-19882171 | None:intergenic | 45.0% | |
| CTTGGACAACTCTTAGTGGA+AGG | + | chr8.3:19882171-19882190 | None:intergenic | 45.0% | |
| GACCAATTGGTGCAGTGATT+GGG | - | chr8.3:19882232-19882251 | MS.gene71925:CDS | 45.0% | |
| TAGTGGAAGGACTTGTGCTT+GGG | + | chr8.3:19882158-19882177 | None:intergenic | 45.0% | |
| TTAGTGGAAGGACTTGTGCT+TGG | + | chr8.3:19882159-19882178 | None:intergenic | 45.0% | |
| ! | CTTGGGTAAGGGAATGGATT+TGG | + | chr8.3:19882141-19882160 | None:intergenic | 45.0% |
| CTTGTGCTTGGGTAAGGGAA+TGG | + | chr8.3:19882147-19882166 | None:intergenic | 50.0% | |
| GAAGGACTTGTGCTTGGGTA+AGG | + | chr8.3:19882153-19882172 | None:intergenic | 50.0% | |
| GACCCAATCACTGCACCAAT+TGG | + | chr8.3:19882237-19882256 | None:intergenic | 50.0% | |
| GAGCAACATGGATGTTCTGG+TGG | + | chr8.3:19882261-19882280 | None:intergenic | 50.0% | |
| GGACCAATTGGTGCAGTGAT+TGG | - | chr8.3:19882231-19882250 | MS.gene71925:CDS | 50.0% | |
| !! | GAGCACTGGAAATCAGTGGG+TGG | + | chr8.3:19882414-19882433 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 19882081 | 19882437 | 19882081 | ID=MS.gene71925 |
| chr8.3 | mRNA | 19882081 | 19882437 | 19882081 | ID=MS.gene71925.t1;Parent=MS.gene71925 |
| chr8.3 | exon | 19882081 | 19882437 | 19882081 | ID=MS.gene71925.t1.exon1;Parent=MS.gene71925.t1 |
| chr8.3 | CDS | 19882081 | 19882437 | 19882081 | ID=cds.MS.gene71925.t1;Parent=MS.gene71925.t1 |
| Gene Sequence |
| Protein sequence |
