AlfalfaGEDB | MS.gene79654

M. sativa cultivar XinJiangDaYe / MS.gene79654

KEGG: K03671
GO: GO:0003674 GO:0003824 GO:0006662 GO:0008150 GO:0008152 GO:0009987 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0018904 GO:0019725 GO:0042592 GO:0044281 GO:0045454 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704
PFAM: PF00085.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79654.t1	ACZ37068.1	95.4	131	6	0	1	131	1	131	8.90E-62	246.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79654.t1	Q38879	59.4	133	52	1	1	131	1	133	3.1e-39	162.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79654.t1	D8L5D9	95.4	131	6	0	1	131	1	131	6.4e-62	246.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049254	MS.gene79654	0.823367	1.44E-53	-1.69E-46
MS.gene049255	MS.gene79654	0.805304	1.42E-49	-1.69E-46
MS.gene049404	MS.gene79654	0.815136	1.08E-51	-1.69E-46
MS.gene049807	MS.gene79654	0.810061	1.39E-50	-1.69E-46
MS.gene049824	MS.gene79654	0.804564	2.03E-49	-1.69E-46
MS.gene049825	MS.gene79654	0.816488	5.39E-52	-1.69E-46
MS.gene049863	MS.gene79654	0.802191	6.31E-49	-1.69E-46
MS.gene049873	MS.gene79654	0.805834	1.10E-49	-1.69E-46
MS.gene050273	MS.gene79654	0.807174	5.75E-50	-1.69E-46
MS.gene050559	MS.gene79654	0.840784	7.06E-58	-1.69E-46
MS.gene050561	MS.gene79654	0.828546	8.46E-55	-1.69E-46
MS.gene050562	MS.gene79654	0.819207	1.31E-52	-1.69E-46
MS.gene050689	MS.gene79654	0.808037	3.77E-50	-1.69E-46
MS.gene050945	MS.gene79654	0.806351	8.58E-50	-1.69E-46
MS.gene050955	MS.gene79654	0.818294	2.11E-52	-1.69E-46
MS.gene051241	MS.gene79654	0.811702	6.13E-51	-1.69E-46
MS.gene051279	MS.gene79654	0.818026	2.43E-52	-1.69E-46
MS.gene051343	MS.gene79654	0.810118	1.35E-50	-1.69E-46
MS.gene051699	MS.gene79654	0.80869	2.74E-50	-1.69E-46
MS.gene051744	MS.gene79654	0.836631	8.36E-57	-1.69E-46
MS.gene052133	MS.gene79654	0.801023	1.09E-48	-1.69E-46
MS.gene052239	MS.gene79654	-0.819842	9.39E-53	-1.69E-46
MS.gene052516	MS.gene79654	0.803408	3.54E-49	-1.69E-46
MS.gene052582	MS.gene79654	0.80213	6.49E-49	-1.69E-46
MS.gene052584	MS.gene79654	0.808356	3.22E-50	-1.69E-46
MS.gene053006	MS.gene79654	0.815292	9.96E-52	-1.69E-46
MS.gene053226	MS.gene79654	0.824136	9.51E-54	-1.69E-46
MS.gene053599	MS.gene79654	0.808553	2.93E-50	-1.69E-46
MS.gene053931	MS.gene79654	0.811699	6.14E-51	-1.69E-46
MS.gene053995	MS.gene79654	0.817017	4.10E-52	-1.69E-46
MS.gene054403	MS.gene79654	0.801733	7.84E-49	-1.69E-46
MS.gene054651	MS.gene79654	0.834194	3.45E-56	-1.69E-46
MS.gene055555	MS.gene79654	0.812311	4.52E-51	-1.69E-46
MS.gene055580	MS.gene79654	-0.807669	4.52E-50	-1.69E-46
MS.gene055778	MS.gene79654	0.803803	2.93E-49	-1.69E-46
MS.gene055808	MS.gene79654	0.816344	5.80E-52	-1.69E-46
MS.gene056091	MS.gene79654	0.821993	3.00E-53	-1.69E-46
MS.gene056677	MS.gene79654	0.80302	4.25E-49	-1.69E-46
MS.gene056699	MS.gene79654	0.811283	7.57E-51	-1.69E-46
MS.gene05686	MS.gene79654	0.81021	1.29E-50	-1.69E-46
MS.gene057102	MS.gene79654	0.827695	1.36E-54	-1.69E-46
MS.gene057208	MS.gene79654	0.809242	2.08E-50	-1.69E-46
MS.gene057694	MS.gene79654	0.802176	6.35E-49	-1.69E-46
MS.gene057705	MS.gene79654	0.884847	1.35E-71	-1.69E-46
MS.gene058008	MS.gene79654	0.826593	2.49E-54	-1.69E-46
MS.gene058009	MS.gene79654	0.813705	2.24E-51	-1.69E-46
MS.gene058635	MS.gene79654	0.806996	6.27E-50	-1.69E-46
MS.gene058783	MS.gene79654	0.806599	7.61E-50	-1.69E-46
MS.gene05953	MS.gene79654	0.814092	1.84E-51	-1.69E-46
MS.gene05954	MS.gene79654	0.828311	9.65E-55	-1.69E-46
MS.gene05985	MS.gene79654	-0.822218	2.67E-53	-1.69E-46
MS.gene059965	MS.gene79654	0.805006	1.64E-49	-1.69E-46
MS.gene060365	MS.gene79654	0.827375	1.62E-54	-1.69E-46
MS.gene060429	MS.gene79654	0.832156	1.11E-55	-1.69E-46
MS.gene060587	MS.gene79654	0.815511	8.91E-52	-1.69E-46
MS.gene060840	MS.gene79654	0.80485	1.77E-49	-1.69E-46
MS.gene060917	MS.gene79654	0.800783	1.23E-48	-1.69E-46
MS.gene061100	MS.gene79654	0.804107	2.53E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene01696	MS.gene79654	PPI
MS.gene031529	MS.gene79654	PPI
MS.gene69799	MS.gene79654	PPI
MS.gene56558	MS.gene79654	PPI
MS.gene79654	MS.gene02264	PPI
MS.gene96813	MS.gene79654	PPI
MS.gene006767	MS.gene79654	PPI
MS.gene79654	MS.gene002305	PPI
MS.gene79654	MS.gene01283	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79654.t1	MTR_7g009070	90.299	134	10	1	1	131	1	134	1.89e-79	230
MS.gene79654.t1	MTR_5g037950	55.385	130	54	1	1	130	1	126	9.14e-41	132
MS.gene79654.t1	MTR_5g037930	56.034	116	51	0	15	130	12	127	7.71e-39	127
MS.gene79654.t1	MTR_5g037890	54.701	117	53	0	14	130	9	125	8.19e-39	127
MS.gene79654.t1	MTR_1g023140	48.214	112	58	0	19	130	2	113	1.71e-38	126
MS.gene79654.t1	MTR_3g112410	46.847	111	59	0	19	129	2	112	1.19e-35	119
MS.gene79654.t1	MTR_5g021180	46.018	113	61	0	19	131	4	116	1.00e-34	117
MS.gene79654.t1	MTR_8g107460	42.574	101	58	0	29	129	260	360	1.55e-26	101
MS.gene79654.t1	MTR_7g073680	38.095	105	65	0	22	126	23	127	2.39e-25	93.6
MS.gene79654.t1	MTR_8g005320	35.238	105	68	0	22	126	25	129	2.01e-24	91.3
MS.gene79654.t1	MTR_2g010750	37.143	105	66	0	23	127	9	113	5.75e-24	89.7
MS.gene79654.t1	MTR_4g081380	36.697	109	69	0	18	126	5	113	9.89e-24	89.4
MS.gene79654.t1	MTR_8g006685	35.238	105	68	0	22	126	94	198	1.76e-23	90.9
MS.gene79654.t1	MTR_8g006560	35.238	105	68	0	22	126	94	198	1.76e-23	90.9
MS.gene79654.t1	MTR_2g082590	35.398	113	73	0	14	126	1	113	2.84e-23	87.8
MS.gene79654.t1	MTR_2g082590	39.806	103	60	1	24	126	26	126	6.31e-23	87.4
MS.gene79654.t1	MTR_1g098660	35.955	89	55	2	41	127	74	162	1.53e-18	77.0
MS.gene79654.t1	MTR_1g114290	38.298	94	53	3	35	127	77	166	1.25e-17	75.1
MS.gene79654.t1	MTR_3g089065	36.082	97	55	4	38	129	78	172	1.34e-17	74.7
MS.gene79654.t1	MTR_2g079420	36.145	83	51	2	48	128	89	171	1.57e-16	72.0
MS.gene79654.t1	MTR_7g102130	29.508	122	82	2	8	129	10	127	5.91e-16	69.3
MS.gene79654.t1	MTR_7g080250	35.484	124	69	5	2	122	57	172	1.55e-15	69.7
MS.gene79654.t1	MTR_8g059015	34.343	99	60	4	32	128	79	174	1.74e-15	69.3
MS.gene79654.t1	MTR_4g094690	31.707	82	54	1	49	128	85	166	4.98e-15	67.8
MS.gene79654.t1	MTR_4g085880	36.842	76	47	1	48	122	84	159	3.58e-14	65.9
MS.gene79654.t1	MTR_2g079340	32.955	88	57	2	44	129	51	138	4.10e-14	65.5
MS.gene79654.t1	MTR_4g088905	35.000	80	52	0	49	128	25	104	3.26e-12	62.4
MS.gene79654.t1	MTR_1g053160	32.468	77	51	1	43	118	425	501	2.87e-11	59.7
MS.gene79654.t1	MTR_3g112400	56.098	41	18	0	79	119	41	81	4.58e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79654.t1	AT5G39950	59.398	133	52	1	1	131	1	133	1.06e-56	173
MS.gene79654.t1	AT1G45145	52.475	101	48	0	29	129	11	111	8.86e-36	119
MS.gene79654.t1	AT3G51030	46.018	113	61	0	19	131	2	114	2.65e-34	115
MS.gene79654.t1	AT1G59730	42.748	131	71	2	1	130	1	128	6.50e-34	115
MS.gene79654.t1	AT1G19730	46.429	112	59	1	19	129	2	113	1.90e-33	113
MS.gene79654.t1	AT1G69880	51.546	97	47	0	33	129	47	143	2.96e-33	114
MS.gene79654.t1	AT5G42980	47.059	102	54	0	29	130	11	112	2.45e-31	108
MS.gene79654.t1	AT3G17880	40.000	105	63	0	25	129	265	369	9.69e-26	99.8
MS.gene79654.t1	AT3G17880	40.000	105	63	0	25	129	272	376	1.20e-25	99.8
MS.gene79654.t1	AT3G08710	39.062	128	74	2	1	126	1	126	2.11e-24	91.3
MS.gene79654.t1	AT3G08710	39.062	128	74	2	1	126	1	126	2.11e-24	91.3
MS.gene79654.t1	AT3G08710	39.062	128	74	2	1	126	1	126	2.11e-24	91.3
MS.gene79654.t1	AT3G56420	38.298	94	58	0	33	126	50	143	2.69e-24	91.7
MS.gene79654.t1	AT3G56420	38.298	94	58	0	33	126	50	143	2.69e-24	91.7
MS.gene79654.t1	AT3G56420	38.298	94	58	0	33	126	50	143	2.69e-24	91.7
MS.gene79654.t1	AT2G40790	38.298	94	58	0	33	126	50	143	1.30e-21	84.7
MS.gene79654.t1	AT2G40790	38.298	94	58	0	33	126	50	143	1.30e-21	84.7
MS.gene79654.t1	AT1G11530	38.144	97	60	0	30	126	9	105	2.41e-21	82.8
MS.gene79654.t1	AT1G43560	36.697	109	66	3	12	117	41	149	8.58e-20	80.1
MS.gene79654.t1	AT1G76760	39.744	78	46	1	41	117	77	154	6.32e-19	78.2
MS.gene79654.t1	AT1G50320	44.286	70	38	1	43	111	85	154	4.12e-17	73.6
MS.gene79654.t1	AT3G02730	36.782	87	54	1	46	131	88	174	5.82e-17	73.2
MS.gene79654.t1	AT3G15360	32.673	101	63	4	30	128	92	189	1.83e-16	72.4
MS.gene79654.t1	AT1G03680	36.145	83	51	2	48	128	95	177	5.47e-16	70.9
MS.gene79654.t1	AT4G03520	36.620	71	44	1	48	117	101	171	1.60e-15	69.7
MS.gene79654.t1	AT3G53220	26.549	113	81	1	17	129	15	125	1.60e-15	68.2
MS.gene79654.t1	AT1G31020	30.000	110	75	1	21	128	47	156	4.20e-15	67.8
MS.gene79654.t1	AT2G35010	34.146	82	52	1	49	128	110	191	4.82e-15	68.6
MS.gene79654.t1	AT2G35010	34.146	82	52	1	49	128	110	191	4.82e-15	68.6
MS.gene79654.t1	AT5G16400	32.184	87	58	1	46	131	98	184	1.66e-14	67.0
MS.gene79654.t1	AT4G04950	33.645	107	67	1	22	128	2	104	4.32e-14	67.8
MS.gene79654.t1	AT4G32580	31.868	91	62	0	38	128	14	104	4.53e-14	65.1
MS.gene79654.t1	AT1G52990	32.632	95	63	1	36	129	218	312	1.48e-13	65.9
MS.gene79654.t1	AT4G26160	32.292	96	61	2	38	129	105	200	2.25e-12	62.0
MS.gene79654.t1	AT2G41680	28.889	90	62	2	43	130	440	529	1.07e-11	61.2

Find 26 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATGTGGCACAAGAGTTTA+AGG	0.257673	7.3:+88727814	MS.gene79654:intron
AATCGATGTTGATGAATTAT+CGG	0.348841	7.3:+88727174	MS.gene79654:CDS
AAAGAGGTTGATAAGGTTGT+TGG	0.418770	7.3:+88727875	MS.gene79654:CDS
TTAGCCATGGCTTGAAGAAT+CGG	0.442279	7.3:-88727124	None:intergenic
CGTTTGTGTTGTTGAAGAAT+GGG	0.453169	7.3:+88727852	MS.gene79654:CDS
ACGTTTGTGTTGTTGAAGAA+TGG	0.456074	7.3:+88727851	MS.gene79654:CDS
TTCTCCTCCTTAGTCGGCAG+TGG	0.459284	7.3:+88726843	MS.gene79654:CDS
TAAGGTTGTTGGAGCAAAGA+AGG	0.462298	7.3:+88727886	MS.gene79654:CDS
TACGGGGCCACTGCCGACTA+AGG	0.463959	7.3:-88726850	None:intergenic
TGATTGATTTCTCTGCTACA+TGG	0.471205	7.3:+88727077	MS.gene79654:CDS
TGATGATTCTGATGACTGTA+CGG	0.487264	7.3:-88726868	None:intergenic
GAATGGGAAAGAGGTTGATA+AGG	0.491854	7.3:+88727868	MS.gene79654:CDS
GATGATTCTGATGACTGTAC+GGG	0.500909	7.3:-88726867	None:intergenic
GATTTCTCTGCTACATGGTG+TGG	0.519111	7.3:+88727082	MS.gene79654:CDS
GGCACAAGAGTTTAAGGTGC+AGG	0.519916	7.3:+88727820	MS.gene79654:CDS
ATCAGTGAATTCATTAGCCA+TGG	0.533887	7.3:-88727137	None:intergenic
GTGTGGACCTTGTAAAATGA+TGG	0.541235	7.3:+88727099	MS.gene79654:CDS
CCTTCCACTCATCTGCTCGC+TGG	0.549073	7.3:+88726910	MS.gene79654:CDS
GTTGTTGAAGAATGGGAAAG+AGG	0.553595	7.3:+88727859	MS.gene79654:CDS
AGATGAGTGGAAGGTCTTGA+CGG	0.570930	7.3:-88726901	None:intergenic
GGGGCCACTGCCGACTAAGG+AGG	0.594415	7.3:-88726847	None:intergenic
GTTGCCAGCGAGCAGATGAG+TGG	0.605035	7.3:-88726914	None:intergenic
TTCTTCAACAACACAAACGT+TGG	0.610426	7.3:-88727848	None:intergenic
CCAGCGAGCAGATGAGTGGA+AGG	0.627549	7.3:-88726910	None:intergenic
GGAACCGATTCTTCAAGCCA+TGG	0.630372	7.3:+88727120	MS.gene79654:CDS
ATGATTCTGATGACTGTACG+GGG	0.715538	7.3:-88726866	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAAAAAATAGAAAAATAAAA+TGG	-	chr7.3:88727012-88727031	None:intergenic	10.0%
!!!	AATTATGTTATTTGTTAAAA+TGG	+	chr7.3:88727348-88727367	MS.gene79654:intron	10.0%
!!!	CATTTTATTTTTCTATTTTT+TGG	+	chr7.3:88727010-88727029	MS.gene79654:intron	10.0%
!!!	TCATTTTTACAAATTATTAT+CGG	+	chr7.3:88727705-88727724	MS.gene79654:intron	10.0%
!!!	AATTATACAAAAAGCATTTA+AGG	+	chr7.3:88727479-88727498	MS.gene79654:intron	15.0%
!!!	ATAATGATTTAATTTTTGTG+TGG	+	chr7.3:88727772-88727791	MS.gene79654:intron	15.0%
!!!	ATTGTATGTTATTTTTTTGA+GGG	+	chr7.3:88727321-88727340	MS.gene79654:intron	15.0%
!!!	TGATAATGGTAAATTTTAAA+AGG	-	chr7.3:88727524-88727543	None:intergenic	15.0%
!!!	AACTAAAAATACATTTTTGC+CGG	+	chr7.3:88727415-88727434	MS.gene79654:intron	20.0%
!!!	ATGTTATTTGTTAAAATGGA+TGG	+	chr7.3:88727352-88727371	MS.gene79654:intron	20.0%
!!!	ATTTTAAAAGGAAAAAGGTT+AGG	-	chr7.3:88727512-88727531	None:intergenic	20.0%
!!!	CATTGTATGTTATTTTTTTG+AGG	+	chr7.3:88727320-88727339	MS.gene79654:intron	20.0%
!!!	GGTAAATTTTAAAAGGAAAA+AGG	-	chr7.3:88727517-88727536	None:intergenic	20.0%
!!!	TTAATTTTTGTGTGGTTTTT+TGG	+	chr7.3:88727780-88727799	MS.gene79654:intron	20.0%
!	AACAGTATAGTTGATCAAAT+TGG	-	chr7.3:88727214-88727233	None:intergenic	25.0%
!	ACAGTATAGTTGATCAAATT+GGG	-	chr7.3:88727213-88727232	None:intergenic	25.0%
!	ATTGAGATCTAAAGAGATAT+GGG	-	chr7.3:88726981-88727000	None:intergenic	25.0%
!	CAAATAATAACACATCGAAT+CGG	-	chr7.3:88727604-88727623	None:intergenic	25.0%
!	TATTGAGATCTAAAGAGATA+TGG	-	chr7.3:88726982-88727001	None:intergenic	25.0%
!	TTCTCAAAGTTTATTATAGC+CGG	-	chr7.3:88727437-88727456	None:intergenic	25.0%
!!	AATCGATGTTGATGAATTAT+CGG	+	chr7.3:88727174-88727193	MS.gene79654:CDS	25.0%
!!	ACCATATTTTACTTACTTGA+CGG	-	chr7.3:88727565-88727584	None:intergenic	25.0%
!!!	TTTTGATTTTCTGTTTGTGA+AGG	+	chr7.3:88727051-88727070	MS.gene79654:intron	25.0%
	ACCGTCAAGTAAGTAAAATA+TGG	+	chr7.3:88727561-88727580	MS.gene79654:intron	30.0%
	AGAAGCAATAACAACACATA+TGG	-	chr7.3:88727742-88727761	None:intergenic	30.0%
	GAAGGATGAACTTAAAAACA+AGG	+	chr7.3:88727904-88727923	MS.gene79654:CDS	30.0%
	TTAAAAGGAAAAAGGTTAGG+TGG	-	chr7.3:88727509-88727528	None:intergenic	30.0%
!	TTCTTTAGATGTTTTTCGTG+TGG	+	chr7.3:88727387-88727406	MS.gene79654:intron	30.0%
!!	ATTTTTGTGTGGTTTTTTGG+TGG	+	chr7.3:88727783-88727802	MS.gene79654:intron	30.0%
!!	TTTTTGTGTGGTTTTTTGGT+GGG	+	chr7.3:88727784-88727803	MS.gene79654:intron	30.0%
	ATCAGTGAATTCATTAGCCA+TGG	-	chr7.3:88727140-88727159	None:intergenic	35.0%
	TGATGATTCTGATGACTGTA+CGG	-	chr7.3:88726871-88726890	None:intergenic	35.0%
	TTCTTCAACAACACAAACGT+TGG	-	chr7.3:88727851-88727870	None:intergenic	35.0%
!	ACGTTTGTGTTGTTGAAGAA+TGG	+	chr7.3:88727851-88727870	MS.gene79654:CDS	35.0%
!	CGTTTGTGTTGTTGAAGAAT+GGG	+	chr7.3:88727852-88727871	MS.gene79654:CDS	35.0%
!	TGATTGATTTCTCTGCTACA+TGG	+	chr7.3:88727077-88727096	MS.gene79654:CDS	35.0%
!	TGATTTTCTGTTTGTGAAGG+TGG	+	chr7.3:88727054-88727073	MS.gene79654:intron	35.0%
!!	AAAGAGGTTGATAAGGTTGT+TGG	+	chr7.3:88727875-88727894	MS.gene79654:CDS	35.0%
!!	ATCGGTTCCATCATTTTACA+AGG	-	chr7.3:88727109-88727128	None:intergenic	35.0%
!!	TCATTTTTCTCCTCCTTAGT+CGG	+	chr7.3:88726837-88726856	MS.gene79654:CDS	35.0%
!!!	AATTTTTAGCACCGACACTT+CGG	+	chr7.3:88727248-88727267	MS.gene79654:intron	35.0%
!!!	GGTTTTTTGGTGGGAATTAT+AGG	+	chr7.3:88727793-88727812	MS.gene79654:intron	35.0%
	ACACGGACAAGACATGATAA+TGG	-	chr7.3:88727538-88727557	None:intergenic	40.0%
	ACTTACTTGACGGTCTAACA+CGG	-	chr7.3:88727555-88727574	None:intergenic	40.0%
	ATGATTCTGATGACTGTACG+GGG	-	chr7.3:88726869-88726888	None:intergenic	40.0%
	GATGATTCTGATGACTGTAC+GGG	-	chr7.3:88726870-88726889	None:intergenic	40.0%
	GTGTGGACCTTGTAAAATGA+TGG	+	chr7.3:88727099-88727118	MS.gene79654:CDS	40.0%
	GTTGTTGAAGAATGGGAAAG+AGG	+	chr7.3:88727859-88727878	MS.gene79654:CDS	40.0%
	TAAGGTTGTTGGAGCAAAGA+AGG	+	chr7.3:88727886-88727905	MS.gene79654:CDS	40.0%
	TTAGCCATGGCTTGAAGAAT+CGG	-	chr7.3:88727127-88727146	None:intergenic	40.0%
	TTGGTGGGAATTATAGGATG+TGG	+	chr7.3:88727799-88727818	MS.gene79654:intron	40.0%
!!	GAATGGGAAAGAGGTTGATA+AGG	+	chr7.3:88727868-88727887	MS.gene79654:CDS	40.0%
	AAACCCTCTATCCGAAGTGT+CGG	-	chr7.3:88727262-88727281	None:intergenic	45.0%
	AGATGAGTGGAAGGTCTTGA+CGG	-	chr7.3:88726904-88726923	None:intergenic	45.0%
	GATTTCTCTGCTACATGGTG+TGG	+	chr7.3:88727082-88727101	MS.gene79654:CDS	45.0%
	GGATGTGGCACAAGAGTTTA+AGG	+	chr7.3:88727814-88727833	MS.gene79654:intron	45.0%
!	GATATGGGTTTTACGAGACG+AGG	-	chr7.3:88726966-88726985	None:intergenic	45.0%
!	GGAACCGATTCTTCAAGCCA+TGG	+	chr7.3:88727120-88727139	MS.gene79654:CDS	50.0%
!	GGCACAAGAGTTTAAGGTGC+AGG	+	chr7.3:88727820-88727839	MS.gene79654:CDS	50.0%
	TTCTCCTCCTTAGTCGGCAG+TGG	+	chr7.3:88726843-88726862	MS.gene79654:CDS	55.0%
!	GCACCGACACTTCGGATAGA+GGG	+	chr7.3:88727256-88727275	MS.gene79654:intron	55.0%
!!	AGCACCGACACTTCGGATAG+AGG	+	chr7.3:88727255-88727274	MS.gene79654:intron	55.0%
	CCAGCGAGCAGATGAGTGGA+AGG	-	chr7.3:88726913-88726932	None:intergenic	60.0%
	CCTTCCACTCATCTGCTCGC+TGG	+	chr7.3:88726910-88726929	MS.gene79654:CDS	60.0%
	GTTGCCAGCGAGCAGATGAG+TGG	-	chr7.3:88726917-88726936	None:intergenic	60.0%
!	TACGGGGCCACTGCCGACTA+AGG	-	chr7.3:88726853-88726872	None:intergenic	65.0%
!	GGGGCCACTGCCGACTAAGG+AGG	-	chr7.3:88726850-88726869	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	88726831	88727946	88726831	ID=MS.gene79654
chr7.3	mRNA	88726831	88727946	88726831	ID=MS.gene79654.t1;Parent=MS.gene79654
chr7.3	exon	88726831	88726971	88726831	ID=MS.gene79654.t1.exon1;Parent=MS.gene79654.t1
chr7.3	CDS	88726831	88726971	88726831	ID=cds.MS.gene79654.t1;Parent=MS.gene79654.t1
chr7.3	exon	88727073	88727195	88727073	ID=MS.gene79654.t1.exon2;Parent=MS.gene79654.t1
chr7.3	CDS	88727073	88727195	88727073	ID=cds.MS.gene79654.t1;Parent=MS.gene79654.t1
chr7.3	exon	88727815	88727946	88727815	ID=MS.gene79654.t1.exon3;Parent=MS.gene79654.t1
chr7.3	CDS	88727815	88727946	88727815	ID=cds.MS.gene79654.t1;Parent=MS.gene79654.t1

Gene Sequence

>MS.gene79654

ATGGGATCATTTTTCTCCTCCTTAGTCGGCAGTGGCCCCGTACAGTCATCAGAATCATCAGAGAGTTCTTCCGTCAAGACCTTCCACTCATCTGCTCGCTGGCAACTTCACTTCAACGAACTCAAAGATTCTCCTCGTCTCGTAAAACCCATATCTCTTTAGATCTCAATAATTTTAACCATTTTATTTTTCTATTTTTTGGATCTGAAATTCTGAATGCTTTTGATTTTCTGTTTGTGAAGGTGGTGATTGATTTCTCTGCTACATGGTGTGGACCTTGTAAAATGATGGAACCGATTCTTCAAGCCATGGCTAATGAATTCACTGATGTTGAATTCATCAAAATCGATGTTGATGAATTATCGGTAATATTCTTATACCCAATTTGATCAACTATACTGTTTTTAATTTCAGTAAAATTTTTAGCACCGACACTTCGGATAGAGGGTTTATCACACTTGTCAGCATGCATCGAACACAACACTGACACATTGTATGTTATTTTTTTGAGGGATTCAATTATGTTATTTGTTAAAATGGATGGAAACTAACACATTTCTTTAGATGTTTTTCGTGTGGTTCTTAACTAAAAATACATTTTTGCCGGCTATAATAAACTTTGAGAAAATCATGAGTAGTTTAATTCAGAATTATACAAAAAGCATTTAAGGAAATCCACCTAACCTTTTTCCTTTTAAAATTTACCATTATCATGTCTTGTCCGTGTTAGACCGTCAAGTAAGTAAAATATGGTCAAAAATTGATTCACTCCGATTCGATGTGTTATTATTTGCATCAATGCTTTGTAGCATATTTATTACGTGTTTGTATTGTATCATAGTACAATACAAACACATGATTACATTCAATTATGTCATTTTTACAAATTATTATCGGTGTAGATGTGTCCATATGTGTTGTTATTGCTTCTTAGCATATTTATAATGATTTAATTTTTGTGTGGTTTTTTGGTGGGAATTATAGGATGTGGCACAAGAGTTTAAGGTGCAGGCTATGCCAACGTTTGTGTTGTTGAAGAATGGGAAAGAGGTTGATAAGGTTGTTGGAGCAAAGAAGGATGAACTTAAAAACAAGGTTCAAAAGCACAAAGCTTAG

Protein sequence

>MS.gene79654.t1

MGSFFSSLVGSGPVQSSESSESSSVKTFHSSARWQLHFNELKDSPRLVVIDFSATWCGPCKMMEPILQAMANEFTDVEFIKIDVDELSDVAQEFKVQAMPTFVLLKNGKEVDKVVGAKKDELKNKVQKHKA