Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92217.t1 | XP_013447450.1 | 95.6 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 5.40E-94 | 353.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92217.t1 | P07689 | 84.9 | 179 | 27 | 0 | 3 | 181 | 2 | 180 | 4.0e-85 | 315.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92217.t1 | B7FMC2 | 95.6 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 3.9e-94 | 353.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene92217 | 0.871058 | 9.13E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene92217 | 0.836446 | 9.31E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene92217 | 0.862894 | 3.67E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene92217 | 0.846943 | 1.58E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene92217 | 0.805162 | 1.53E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene92217 | 0.803045 | 4.20E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene92217 | 0.805508 | 1.29E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene92217 | 0.800142 | 1.66E-48 | -1.69E-46 |
| MS.gene050165 | MS.gene92217 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene92217 | 0.826686 | 2.37E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene92217 | 0.816615 | 5.05E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene92217 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene92217 | 0.828928 | 6.84E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene92217 | 0.802723 | 4.90E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene92217 | 0.840305 | 9.42E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene92217 | 0.848123 | 7.49E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene92217 | 0.818405 | 1.99E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene92217 | 0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene92217 | 0.81004 | 1.40E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene92217 | 0.801092 | 1.06E-48 | -1.69E-46 |
| MS.gene052506 | MS.gene92217 | 0.812834 | 3.47E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene92217 | 0.835298 | 1.82E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene92217 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene053213 | MS.gene92217 | 0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene92217 | 0.807099 | 5.96E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene92217 | 0.803545 | 3.31E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene92217 | 0.800556 | 1.36E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene92217 | 0.840641 | 7.70E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene92217 | 0.862813 | 3.89E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene92217 | 0.860546 | 1.92E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene92217 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene92217 | 0.82413 | 9.54E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene92217 | 0.827477 | 1.53E-54 | -1.69E-46 |
| MS.gene055849 | MS.gene92217 | 0.839974 | 1.15E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene92217 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene92217 | 0.833523 | 5.08E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene92217 | 0.828668 | 7.91E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene92217 | 0.84951 | 3.09E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene92217 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene92217 | 0.872123 | 4.05E-67 | -1.69E-46 |
| MS.gene058544 | MS.gene92217 | 0.801227 | 9.94E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene92217 | 0.830321 | 3.14E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene92217 | 0.820083 | 8.27E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene92217 | 0.859416 | 4.20E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene92217 | 0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene92217 | 0.85936 | 4.36E-63 | -1.69E-46 |
| MS.gene059718 | MS.gene92217 | 0.830445 | 2.93E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene92217 | 0.826318 | 2.90E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene92217 | 0.830266 | 3.24E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene92217 | 0.816171 | 6.35E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene92217 | 0.800897 | 1.16E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene92217 | 0.811501 | 6.78E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074249 | MS.gene92217 | PPI |
| MS.gene54465 | MS.gene92217 | PPI |
| MS.gene80966 | MS.gene92217 | PPI |
| MS.gene92217 | MS.gene54468 | PPI |
| MS.gene92217 | MS.gene074567 | PPI |
| MS.gene92217 | MS.gene074568 | PPI |
| MS.gene92217 | MS.gene80971 | PPI |
| MS.gene92217 | MS.gene074566 | PPI |
| MS.gene92217 | MS.gene92220 | PPI |
| MS.gene92217 | MS.gene074247 | PPI |
| MS.gene92217 | MS.gene76905 | PPI |
| MS.gene92216 | MS.gene92217 | PPI |
| MS.gene76908 | MS.gene92217 | PPI |
| MS.gene92217 | MS.gene074248 | PPI |
| MS.gene92217 | MS.gene92218 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92217.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 9.44e-124 | 346 |
| MS.gene92217.t1 | MTR_7g007120 | 95.294 | 170 | 8 | 0 | 12 | 181 | 12 | 181 | 1.95e-123 | 345 |
| MS.gene92217.t1 | MTR_7g007220 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 2.03e-123 | 345 |
| MS.gene92217.t1 | MTR_7g007200 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 2.06e-123 | 345 |
| MS.gene92217.t1 | MTR_7g007120 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 5.40e-123 | 344 |
| MS.gene92217.t1 | MTR_7g007230 | 93.529 | 170 | 11 | 0 | 12 | 181 | 12 | 181 | 4.85e-121 | 339 |
| MS.gene92217.t1 | MTR_6g018310 | 85.475 | 179 | 25 | 1 | 4 | 181 | 2 | 180 | 2.24e-115 | 325 |
| MS.gene92217.t1 | MTR_6g018300 | 83.240 | 179 | 26 | 2 | 4 | 181 | 2 | 177 | 1.98e-110 | 312 |
| MS.gene92217.t1 | MTR_7g007210 | 94.805 | 154 | 8 | 0 | 11 | 164 | 11 | 164 | 9.35e-110 | 311 |
| MS.gene92217.t1 | MTR_4g127870 | 49.359 | 156 | 75 | 2 | 28 | 180 | 15 | 169 | 1.01e-56 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92217.t1 | AT1G67090 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 4.37e-93 | 269 |
| MS.gene92217.t1 | AT5G38410 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 4.83e-93 | 268 |
| MS.gene92217.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 1.25e-92 | 268 |
| MS.gene92217.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 1.25e-92 | 268 |
| MS.gene92217.t1 | AT5G38420 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 9.31e-92 | 265 |
| MS.gene92217.t1 | AT5G38410 | 68.449 | 187 | 49 | 3 | 1 | 181 | 1 | 183 | 6.80e-91 | 263 |
| MS.gene92217.t1 | AT5G38410 | 67.582 | 182 | 47 | 3 | 1 | 181 | 1 | 171 | 2.96e-86 | 251 |
| MS.gene92217.t1 | AT1G67090 | 64.348 | 115 | 36 | 2 | 1 | 114 | 1 | 111 | 4.63e-45 | 145 |
Find 53 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCATCCCTTCCTTATA+AGG | 0.282748 | 7.1:+87135973 | None:intergenic |
| AAGAAGTTGAATACCTTATA+AGG | 0.317300 | 7.1:-87135986 | MS.gene92217:CDS |
| TCTTTGTTGACCTTTGTAAC+TGG | 0.323260 | 7.1:+87136383 | None:intergenic |
| GATACTATGACGGACGTTAC+TGG | 0.345500 | 7.1:-87135731 | MS.gene92217:CDS |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.1:-87135964 | MS.gene92217:CDS |
| TTCTTTCGCCAATTGTTCTC+TGG | 0.378466 | 7.1:+87136004 | None:intergenic |
| GACCTTTGTAACTGGGAAAC+TGG | 0.392333 | 7.1:+87136391 | None:intergenic |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.405140 | 7.1:+87136011 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.409622 | 7.1:-87136012 | MS.gene92217:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.1:-87135705 | MS.gene92217:CDS |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.1:-87136459 | MS.gene92217:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435101 | 7.1:+87136053 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.1:+87135627 | None:intergenic |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.1:-87135624 | MS.gene92217:CDS |
| GGCGCAGTGGCTCCATTCGT+TGG | 0.489747 | 7.1:-87136428 | MS.gene92217:CDS |
| CTTTGTTGACCTTTGTAACT+GGG | 0.508579 | 7.1:+87136384 | None:intergenic |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.1:+87136056 | None:intergenic |
| CGTGAGAACCACAGTTCACC+AGG | 0.516570 | 7.1:-87135753 | MS.gene92217:CDS |
| AATACCTTATAAGGAAGGGA+TGG | 0.520774 | 7.1:-87135977 | MS.gene92217:CDS |
| CGTGCCTCTTCGGTACAATC+CGG | 0.524408 | 7.1:-87136449 | MS.gene92217:CDS |
| AGTAAAACTTAGTAAACTGC+TGG | 0.535526 | 7.1:+87135552 | None:intergenic |
| AGTTGAATACCTTATAAGGA+AGG | 0.536755 | 7.1:-87135982 | MS.gene92217:CDS |
| TCTTCCACCATTGCTTGCAA+TGG | 0.537419 | 7.1:+87136352 | None:intergenic |
| CGATGCTTCTCAAGTGCTGA+AGG | 0.539995 | 7.1:-87135676 | MS.gene92217:CDS |
| AACGAATGGAGCCACTGCGC+CGG | 0.545146 | 7.1:+87136430 | None:intergenic |
| TGAAACTGATGCATTGAACT+TGG | 0.551147 | 7.1:+87135586 | None:intergenic |
| CTTCAGCACTTGAGAAGCAT+CGG | 0.558039 | 7.1:+87135677 | None:intergenic |
| TAACGTCCGTCATAGTATCC+TGG | 0.560465 | 7.1:+87135735 | None:intergenic |
| ACTTCCATTGCAAGCAATGG+TGG | 0.573273 | 7.1:-87136356 | MS.gene92217:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.1:+87135613 | None:intergenic |
| AACTGTAGTCATAGCTGAAG+AGG | 0.581913 | 7.1:+87136475 | None:intergenic |
| ATTACTTCCATTGCAAGCAA+TGG | 0.582522 | 7.1:-87136359 | MS.gene92217:CDS |
| TGTAACTGGGAAACTGGCCA+TGG | 0.582656 | 7.1:+87136397 | None:intergenic |
| CTGGTGAACTGTGGTTCTCA+CGG | 0.583102 | 7.1:+87135754 | None:intergenic |
| GGCCAGTTTCCCAGTTACAA+AGG | 0.584504 | 7.1:-87136393 | MS.gene92217:CDS |
| ATACCTTATAAGGAAGGGAT+GGG | 0.588445 | 7.1:-87135976 | MS.gene92217:CDS |
| GTTGAATACCTTATAAGGAA+GGG | 0.588887 | 7.1:-87135981 | MS.gene92217:CDS |
| GCATCGGTTGCTCCAAACAA+AGG | 0.600691 | 7.1:+87135693 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.600961 | 7.1:+87136014 | None:intergenic |
| ATTCGTTGGACTCAAATCCA+TGG | 0.603675 | 7.1:-87136414 | MS.gene92217:CDS |
| TTCGGTACAATCCGGCGCAG+TGG | 0.604437 | 7.1:-87136441 | MS.gene92217:CDS |
| AGCTGAAGAGGAAATCATAG+AGG | 0.609922 | 7.1:+87136487 | None:intergenic |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.1:-87135949 | MS.gene92217:intron |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.1:+87136018 | None:intergenic |
| TGGAAGAGTAAGCTGCATGC+AGG | 0.622787 | 7.1:-87136336 | MS.gene92217:intron |
| ATGGATTTGAGTCCAACGAA+TGG | 0.627592 | 7.1:+87136416 | None:intergenic |
| CATAGTATCCTGGTGAACTG+TGG | 0.641120 | 7.1:+87135745 | None:intergenic |
| CGGATTGTACCGAAGAGGCA+CGG | 0.641462 | 7.1:+87136450 | None:intergenic |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.1:+87135628 | None:intergenic |
| AGTTCACCAGGATACTATGA+CGG | 0.676016 | 7.1:-87135741 | MS.gene92217:CDS |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.1:+87135620 | None:intergenic |
| TGCGCCGGATTGTACCGAAG+AGG | 0.688359 | 7.1:+87136445 | None:intergenic |
| ACGGACGTTACTGGACAATG+TGG | 0.708236 | 7.1:-87135722 | MS.gene92217:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTATTAGCATAA+TGG | - | chr7.1:87135764-87135783 | MS.gene92217:CDS | 10.0% |
| !!! | TATATATAGTTTTGAACTTA+TGG | - | chr7.1:87136167-87136186 | MS.gene92217:intron | 15.0% |
| !! | AGTAAATTAAAATTAGACCT+CGG | + | chr7.1:87136125-87136144 | None:intergenic | 20.0% |
| !! | TATAAGATGAAAACAGTTTA+CGG | + | chr7.1:87135808-87135827 | None:intergenic | 20.0% |
| !!! | CTCAAAAGGATTTTAAATTA+AGG | + | chr7.1:87136230-87136249 | None:intergenic | 20.0% |
| ! | AAGAAGTTGAATACCTTATA+AGG | - | chr7.1:87136068-87136087 | MS.gene92217:intron | 25.0% |
| !! | TGACTCTTTTGTTCAATTTT+AGG | - | chr7.1:87135970-87135989 | MS.gene92217:CDS | 25.0% |
| !!! | AAAATCCTTTTGAGTTATGA+TGG | - | chr7.1:87136236-87136255 | MS.gene92217:intron | 25.0% |
| !!! | GTTTTGAACTTATGGTTAAT+CGG | - | chr7.1:87136175-87136194 | MS.gene92217:intron | 25.0% |
| AGTTGAATACCTTATAAGGA+AGG | - | chr7.1:87136072-87136091 | MS.gene92217:intron | 30.0% | |
| GTTAACCATCATAACTCAAA+AGG | + | chr7.1:87136244-87136263 | None:intergenic | 30.0% | |
| GTTGAATACCTTATAAGGAA+GGG | - | chr7.1:87136073-87136092 | MS.gene92217:intron | 30.0% | |
| !! | CTTTTGTTCAATTTTAGGTG+TGG | - | chr7.1:87135975-87135994 | MS.gene92217:CDS | 30.0% |
| AATACCTTATAAGGAAGGGA+TGG | - | chr7.1:87136077-87136096 | MS.gene92217:intron | 35.0% | |
| AATCCTTTCTGCAAATAAGC+AGG | + | chr7.1:87136274-87136293 | None:intergenic | 35.0% | |
| ATACCTTATAAGGAAGGGAT+GGG | - | chr7.1:87136078-87136097 | MS.gene92217:intron | 35.0% | |
| ATTACTTCCATTGCAAGCAA+TGG | - | chr7.1:87135695-87135714 | MS.gene92217:CDS | 35.0% | |
| CTTTGTTGACCTTTGTAACT+GGG | + | chr7.1:87135673-87135692 | None:intergenic | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.1:87136004-87136023 | None:intergenic | 35.0% | |
| TCTTTGTTGACCTTTGTAAC+TGG | + | chr7.1:87135674-87135693 | None:intergenic | 35.0% | |
| TGAAACTGATGCATTGAACT+TGG | + | chr7.1:87136471-87136490 | None:intergenic | 35.0% | |
| AACTGTAGTCATAGCTGAAG+AGG | + | chr7.1:87135582-87135601 | None:intergenic | 40.0% | |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.1:87136001-87136020 | None:intergenic | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.1:87136043-87136062 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.1:87136042-87136061 | MS.gene92217:CDS | 40.0% | |
| AGCTGAAGAGGAAATCATAG+AGG | + | chr7.1:87135570-87135589 | None:intergenic | 40.0% | |
| AGTTCACCAGGATACTATGA+CGG | - | chr7.1:87136313-87136332 | MS.gene92217:intron | 40.0% | |
| ATGGATTTGAGTCCAACGAA+TGG | + | chr7.1:87135641-87135660 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.1:87136349-87136368 | MS.gene92217:CDS | 40.0% | |
| ATTCGTTGGACTCAAATCCA+TGG | - | chr7.1:87135640-87135659 | MS.gene92217:CDS | 40.0% | |
| CTACCTGCTTATTTGCAGAA+AGG | - | chr7.1:87136268-87136287 | MS.gene92217:intron | 40.0% | |
| GTTTGTCATGAATCAGATCG+CGG | - | chr7.1:87136197-87136216 | MS.gene92217:intron | 40.0% | |
| TTCTTTCGCCAATTGTTCTC+TGG | + | chr7.1:87136053-87136072 | None:intergenic | 40.0% | |
| ACTTCCATTGCAAGCAATGG+TGG | - | chr7.1:87135698-87135717 | MS.gene92217:CDS | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.1:87136084-87136103 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGAACTG+TGG | + | chr7.1:87136312-87136331 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.1:87136444-87136463 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.1:87136437-87136456 | None:intergenic | 45.0% | |
| GACCTTTGTAACTGGGAAAC+TGG | + | chr7.1:87135666-87135685 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.1:87136430-87136449 | MS.gene92217:CDS | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.1:87136046-87136065 | None:intergenic | 45.0% | |
| TAACGTCCGTCATAGTATCC+TGG | + | chr7.1:87136322-87136341 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.1:87135595-87135614 | MS.gene92217:CDS | 45.0% | |
| TCTTCCACCATTGCTTGCAA+TGG | + | chr7.1:87135705-87135724 | None:intergenic | 45.0% | |
| ! | CTTCAGCACTTGAGAAGCAT+CGG | + | chr7.1:87136380-87136399 | None:intergenic | 45.0% |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.1:87136105-87136124 | MS.gene92217:intron | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.1:87136430-87136449 | None:intergenic | 45.0% |
| !! | GATACTATGACGGACGTTAC+TGG | - | chr7.1:87136323-87136342 | MS.gene92217:intron | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.1:87136429-87136448 | None:intergenic | 45.0% |
| !! | TTTTAGGTGTGGCCTCCTAT+TGG | - | chr7.1:87135986-87136005 | MS.gene92217:CDS | 45.0% |
| !! | TAATAATAAAATAAAATAGT+AGG | + | chr7.1:87135758-87135777 | None:intergenic | 5.0% |
| ACGGACGTTACTGGACAATG+TGG | - | chr7.1:87136332-87136351 | MS.gene92217:intron | 50.0% | |
| CATGAATCAGATCGCGGTCA+CGG | - | chr7.1:87136203-87136222 | MS.gene92217:intron | 50.0% | |
| CTGGTGAACTGTGGTTCTCA+CGG | + | chr7.1:87136303-87136322 | None:intergenic | 50.0% | |
| GGCCAGTTTCCCAGTTACAA+AGG | - | chr7.1:87135661-87135680 | MS.gene92217:CDS | 50.0% | |
| TGGAAGAGTAAGCTGCATGC+AGG | - | chr7.1:87135718-87135737 | MS.gene92217:CDS | 50.0% | |
| TGTAACTGGGAAACTGGCCA+TGG | + | chr7.1:87135660-87135679 | None:intergenic | 50.0% | |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.1:87136039-87136058 | None:intergenic | 50.0% |
| !! | CGATGCTTCTCAAGTGCTGA+AGG | - | chr7.1:87136378-87136397 | MS.gene92217:CDS | 50.0% |
| !! | GCATCGGTTGCTCCAAACAA+AGG | + | chr7.1:87136364-87136383 | None:intergenic | 50.0% |
| CGGATTGTACCGAAGAGGCA+CGG | + | chr7.1:87135607-87135626 | None:intergenic | 55.0% | |
| CGTGAGAACCACAGTTCACC+AGG | - | chr7.1:87136301-87136320 | MS.gene92217:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+CGG | - | chr7.1:87135605-87135624 | MS.gene92217:CDS | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.1:87136090-87136109 | MS.gene92217:intron | 55.0% |
| AACGAATGGAGCCACTGCGC+CGG | + | chr7.1:87135627-87135646 | None:intergenic | 60.0% | |
| TGCGCCGGATTGTACCGAAG+AGG | + | chr7.1:87135612-87135631 | None:intergenic | 60.0% | |
| TTCGGTACAATCCGGCGCAG+TGG | - | chr7.1:87135613-87135632 | MS.gene92217:CDS | 60.0% | |
| GGCGCAGTGGCTCCATTCGT+TGG | - | chr7.1:87135626-87135645 | MS.gene92217:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87135560 | 87136516 | 87135560 | ID=MS.gene92217 |
| chr7.1 | mRNA | 87135560 | 87136516 | 87135560 | ID=MS.gene92217.t1;Parent=MS.gene92217 |
| chr7.1 | exon | 87136337 | 87136516 | 87136337 | ID=MS.gene92217.t1.exon1;Parent=MS.gene92217.t1 |
| chr7.1 | CDS | 87136337 | 87136516 | 87136337 | ID=cds.MS.gene92217.t1;Parent=MS.gene92217.t1 |
| chr7.1 | exon | 87135950 | 87136084 | 87135950 | ID=MS.gene92217.t1.exon2;Parent=MS.gene92217.t1 |
| chr7.1 | CDS | 87135950 | 87136084 | 87135950 | ID=cds.MS.gene92217.t1;Parent=MS.gene92217.t1 |
| chr7.1 | exon | 87135560 | 87135790 | 87135560 | ID=MS.gene92217.t1.exon3;Parent=MS.gene92217.t1 |
| chr7.1 | CDS | 87135560 | 87135790 | 87135560 | ID=cds.MS.gene92217.t1;Parent=MS.gene92217.t1 |
| Gene Sequence |
| Protein sequence |
