Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76905.t1 | XP_013447451.1 | 94.5 | 181 | 10 | 0 | 1 | 181 | 1 | 181 | 1.10E-94 | 355.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76905.t1 | P07689 | 84.4 | 179 | 28 | 0 | 3 | 181 | 2 | 180 | 3.6e-86 | 318.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76905.t1 | A0A072U6Q1 | 94.5 | 181 | 10 | 0 | 1 | 181 | 1 | 181 | 7.9e-95 | 355.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene76905 | 0.813366 | 2.65E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene76905 | 0.867156 | 1.68E-65 | -1.69E-46 |
| MS.gene049173 | MS.gene76905 | 0.892986 | 9.56E-75 | -1.69E-46 |
| MS.gene049217 | MS.gene76905 | 0.894522 | 2.28E-75 | -1.69E-46 |
| MS.gene049222 | MS.gene76905 | 0.859337 | 4.43E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene76905 | 0.807976 | 3.89E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene76905 | 0.891634 | 3.32E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene76905 | 0.88478 | 1.43E-71 | -1.69E-46 |
| MS.gene049369 | MS.gene76905 | 0.824007 | 1.02E-53 | -1.69E-46 |
| MS.gene04939 | MS.gene76905 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene049425 | MS.gene76905 | -0.818648 | 1.76E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene76905 | 0.828839 | 7.19E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene76905 | 0.882492 | 9.96E-71 | -1.69E-46 |
| MS.gene049614 | MS.gene76905 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene76905 | 0.848612 | 5.49E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene76905 | 0.86782 | 1.03E-65 | -1.69E-46 |
| MS.gene050076 | MS.gene76905 | 0.811046 | 8.51E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene76905 | 0.809491 | 1.84E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene76905 | 0.874937 | 4.57E-68 | -1.69E-46 |
| MS.gene050165 | MS.gene76905 | 0.86711 | 1.74E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene76905 | 0.875095 | 4.04E-68 | -1.69E-46 |
| MS.gene050432 | MS.gene76905 | 0.833007 | 6.83E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene76905 | 0.856942 | 2.29E-62 | -1.69E-46 |
| MS.gene050475 | MS.gene76905 | -0.833486 | 5.19E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene76905 | 0.846788 | 1.74E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene76905 | 0.850851 | 1.30E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene76905 | 0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene050541 | MS.gene76905 | -0.829382 | 5.31E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene76905 | 0.854933 | 8.85E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene76905 | 0.863522 | 2.34E-64 | -1.69E-46 |
| MS.gene050662 | MS.gene76905 | 0.831789 | 1.37E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene76905 | 0.87281 | 2.39E-67 | -1.69E-46 |
| MS.gene050686 | MS.gene76905 | 0.837415 | 5.27E-57 | -1.69E-46 |
| MS.gene050690 | MS.gene76905 | 0.800873 | 1.18E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene76905 | 0.869661 | 2.62E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene76905 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene76905 | 0.862813 | 3.89E-64 | -1.69E-46 |
| MS.gene050770 | MS.gene76905 | 0.865482 | 5.72E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene76905 | 0.906592 | 1.26E-80 | -1.69E-46 |
| MS.gene05079 | MS.gene76905 | -0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene76905 | 0.841607 | 4.29E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene76905 | 0.804489 | 2.11E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene76905 | 0.802442 | 5.60E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene76905 | 0.819713 | 1.01E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene76905 | 0.851386 | 9.18E-61 | -1.69E-46 |
| MS.gene05100 | MS.gene76905 | 0.848251 | 6.90E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene76905 | 0.841683 | 4.09E-58 | -1.69E-46 |
| MS.gene051228 | MS.gene76905 | 0.903789 | 2.41E-79 | -1.69E-46 |
| MS.gene051434 | MS.gene76905 | 0.824078 | 9.81E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene76905 | 0.840485 | 8.45E-58 | -1.69E-46 |
| MS.gene051617 | MS.gene76905 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene76905 | 0.84949 | 3.13E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene76905 | 0.840265 | 9.65E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene76905 | 0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene76905 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene76905 | 0.897817 | 9.73E-77 | -1.69E-46 |
| MS.gene051858 | MS.gene76905 | 0.883187 | 5.55E-71 | -1.69E-46 |
| MS.gene051874 | MS.gene76905 | 0.805968 | 1.03E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene76905 | 0.854589 | 1.11E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene76905 | 0.811806 | 5.82E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene76905 | 0.910148 | 2.59E-82 | -1.69E-46 |
| MS.gene052290 | MS.gene76905 | 0.843954 | 1.02E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene76905 | 0.818605 | 1.80E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene76905 | 0.878538 | 2.59E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene76905 | 0.821175 | 4.64E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene76905 | 0.845766 | 3.31E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene76905 | 0.821897 | 3.16E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene76905 | 0.802802 | 4.72E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene76905 | 0.860991 | 1.40E-63 | -1.69E-46 |
| MS.gene052822 | MS.gene76905 | 0.824519 | 7.72E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene76905 | 0.806621 | 7.53E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene76905 | 0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene052870 | MS.gene76905 | 0.849883 | 2.43E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene76905 | 0.855263 | 7.10E-62 | -1.69E-46 |
| MS.gene052916 | MS.gene76905 | 0.84936 | 3.40E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene76905 | 0.813848 | 2.08E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene76905 | 0.883572 | 4.01E-71 | -1.69E-46 |
| MS.gene053103 | MS.gene76905 | 0.835376 | 1.74E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene76905 | 0.86968 | 2.58E-66 | -1.69E-46 |
| MS.gene053203 | MS.gene76905 | 0.813467 | 2.52E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene76905 | 0.86618 | 3.44E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene76905 | 0.822664 | 2.10E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene76905 | 0.878959 | 1.84E-69 | -1.69E-46 |
| MS.gene053286 | MS.gene76905 | 0.869426 | 3.12E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene76905 | 0.87068 | 1.21E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene76905 | 0.843663 | 1.22E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene76905 | 0.833254 | 5.93E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene76905 | -0.812695 | 3.72E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene76905 | 0.853925 | 1.73E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene76905 | 0.894356 | 2.66E-75 | -1.69E-46 |
| MS.gene053813 | MS.gene76905 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene76905 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene76905 | 0.83068 | 2.56E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene76905 | 0.862177 | 6.10E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene76905 | 0.850516 | 1.61E-60 | -1.69E-46 |
| MS.gene054543 | MS.gene76905 | 0.824629 | 7.28E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene76905 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene76905 | 0.85932 | 4.49E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene76905 | 0.902334 | 1.08E-78 | -1.69E-46 |
| MS.gene054802 | MS.gene76905 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene76905 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene76905 | 0.808787 | 2.61E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene76905 | 0.817616 | 3.01E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene76905 | 0.863828 | 1.88E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene76905 | 0.859748 | 3.34E-63 | -1.69E-46 |
| MS.gene055154 | MS.gene76905 | -0.803727 | 3.04E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene76905 | 0.882235 | 1.24E-70 | -1.69E-46 |
| MS.gene055212 | MS.gene76905 | 0.853761 | 1.93E-61 | -1.69E-46 |
| MS.gene055254 | MS.gene76905 | 0.857283 | 1.81E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene76905 | 0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene76905 | 0.875666 | 2.57E-68 | -1.69E-46 |
| MS.gene055397 | MS.gene76905 | 0.873558 | 1.34E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene76905 | 0.861086 | 1.31E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene76905 | 0.877466 | 6.15E-69 | -1.69E-46 |
| MS.gene055577 | MS.gene76905 | 0.841779 | 3.86E-58 | -1.69E-46 |
| MS.gene055636 | MS.gene76905 | 0.87509 | 4.05E-68 | -1.69E-46 |
| MS.gene055638 | MS.gene76905 | 0.863035 | 3.32E-64 | -1.69E-46 |
| MS.gene055647 | MS.gene76905 | 0.880666 | 4.55E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene76905 | 0.91594 | 3.24E-85 | -1.69E-46 |
| MS.gene055776 | MS.gene76905 | 0.810193 | 1.30E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene76905 | 0.891224 | 4.83E-74 | -1.69E-46 |
| MS.gene055941 | MS.gene76905 | 0.84856 | 5.67E-60 | -1.69E-46 |
| MS.gene055956 | MS.gene76905 | -0.852654 | 4.00E-61 | -1.69E-46 |
| MS.gene056083 | MS.gene76905 | 0.866416 | 2.90E-65 | -1.69E-46 |
| MS.gene056374 | MS.gene76905 | 0.873692 | 1.21E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene76905 | 0.811552 | 6.61E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene76905 | 0.801061 | 1.08E-48 | -1.69E-46 |
| MS.gene056487 | MS.gene76905 | 0.833316 | 5.72E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene76905 | 0.821785 | 3.36E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene76905 | 0.845299 | 4.43E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene76905 | 0.825715 | 4.03E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene76905 | 0.837087 | 6.39E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene76905 | 0.870339 | 1.57E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene76905 | 0.897901 | 8.97E-77 | -1.69E-46 |
| MS.gene056692 | MS.gene76905 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene76905 | 0.834506 | 2.88E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene76905 | 0.81384 | 2.09E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene76905 | 0.874617 | 5.87E-68 | -1.69E-46 |
| MS.gene057123 | MS.gene76905 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene76905 | 0.90088 | 4.70E-78 | -1.69E-46 |
| MS.gene057146 | MS.gene76905 | 0.833712 | 4.55E-56 | -1.69E-46 |
| MS.gene057246 | MS.gene76905 | 0.821214 | 4.55E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene76905 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene76905 | 0.873696 | 1.20E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene76905 | 0.810541 | 1.10E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene76905 | 0.887472 | 1.39E-72 | -1.69E-46 |
| MS.gene057658 | MS.gene76905 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene76905 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene057805 | MS.gene76905 | 0.817096 | 3.94E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene76905 | 0.812295 | 4.56E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene76905 | 0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene76905 | 0.852909 | 3.39E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene76905 | 0.85823 | 9.50E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene76905 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene76905 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene76905 | 0.83075 | 2.46E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene76905 | 0.901779 | 1.90E-78 | -1.69E-46 |
| MS.gene058459 | MS.gene76905 | 0.815308 | 9.88E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene76905 | 0.835793 | 1.36E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene76905 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene76905 | 0.905823 | 2.86E-80 | -1.69E-46 |
| MS.gene058773 | MS.gene76905 | 0.870278 | 1.65E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene76905 | 0.828535 | 8.52E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene76905 | 0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene76905 | -0.818301 | 2.11E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene76905 | 0.8739 | 1.03E-67 | -1.69E-46 |
| MS.gene059023 | MS.gene76905 | 0.834475 | 2.93E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene76905 | 0.889702 | 1.91E-73 | -1.69E-46 |
| MS.gene05913 | MS.gene76905 | 0.878099 | 3.69E-69 | -1.69E-46 |
| MS.gene05934 | MS.gene76905 | 0.853309 | 2.60E-61 | -1.69E-46 |
| MS.gene059455 | MS.gene76905 | 0.824314 | 8.63E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene76905 | 0.857362 | 1.72E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene76905 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene76905 | 0.891966 | 2.45E-74 | -1.69E-46 |
| MS.gene059688 | MS.gene76905 | 0.829728 | 4.37E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene76905 | 0.835429 | 1.69E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene76905 | 0.835472 | 1.65E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene76905 | 0.84727 | 1.29E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene76905 | 0.877832 | 4.58E-69 | -1.69E-46 |
| MS.gene059756 | MS.gene76905 | 0.831091 | 2.03E-55 | -1.69E-46 |
| MS.gene059858 | MS.gene76905 | 0.833086 | 6.53E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene76905 | 0.849332 | 3.46E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene76905 | 0.877805 | 4.68E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene76905 | 0.873902 | 1.03E-67 | -1.69E-46 |
| MS.gene060193 | MS.gene76905 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene060336 | MS.gene76905 | -0.811447 | 6.97E-51 | -1.69E-46 |
| MS.gene060341 | MS.gene76905 | 0.862957 | 3.51E-64 | -1.69E-46 |
| MS.gene060482 | MS.gene76905 | 0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene76905 | 0.838594 | 2.62E-57 | -1.69E-46 |
| MS.gene060727 | MS.gene76905 | 0.845403 | 4.15E-59 | -1.69E-46 |
| MS.gene060728 | MS.gene76905 | 0.832368 | 9.84E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene76905 | 0.855515 | 5.99E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene76905 | 0.882962 | 6.71E-71 | -1.69E-46 |
| MS.gene060818 | MS.gene76905 | 0.896031 | 5.45E-76 | -1.69E-46 |
| MS.gene060835 | MS.gene76905 | 0.847333 | 1.24E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene76905 | 0.828276 | 9.84E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene76905 | 0.818722 | 1.69E-52 | -1.69E-46 |
| MS.gene060981 | MS.gene76905 | 0.841106 | 5.81E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene76905 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene76905 | 0.867968 | 9.25E-66 | -1.69E-46 |
| MS.gene061134 | MS.gene76905 | 0.843485 | 1.36E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene76905 | 0.851294 | 9.75E-61 | -1.69E-46 |
| MS.gene061200 | MS.gene76905 | 0.884342 | 2.08E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76905 | MS.gene54468 | PPI |
| MS.gene76905 | MS.gene074567 | PPI |
| MS.gene76905 | MS.gene074568 | PPI |
| MS.gene074248 | MS.gene76905 | PPI |
| MS.gene76905 | MS.gene80971 | PPI |
| MS.gene074249 | MS.gene76905 | PPI |
| MS.gene54465 | MS.gene76905 | PPI |
| MS.gene76905 | MS.gene92220 | PPI |
| MS.gene76905 | MS.gene074247 | PPI |
| MS.gene80966 | MS.gene76905 | PPI |
| MS.gene76905 | MS.gene074248 | PPI |
| MS.gene76905 | MS.gene92218 | PPI |
| MS.gene074566 | MS.gene76905 | PPI |
| MS.gene92217 | MS.gene76905 | PPI |
| MS.gene92216 | MS.gene76905 | PPI |
| MS.gene76908 | MS.gene76905 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76905.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 1.99e-124 | 348 |
| MS.gene76905.t1 | MTR_7g007200 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 3.29e-124 | 347 |
| MS.gene76905.t1 | MTR_7g007220 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 3.80e-124 | 347 |
| MS.gene76905.t1 | MTR_7g007120 | 94.706 | 170 | 9 | 0 | 12 | 181 | 12 | 181 | 8.46e-124 | 346 |
| MS.gene76905.t1 | MTR_7g007120 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 1.08e-123 | 346 |
| MS.gene76905.t1 | MTR_7g007230 | 92.941 | 170 | 12 | 0 | 12 | 181 | 12 | 181 | 5.72e-121 | 339 |
| MS.gene76905.t1 | MTR_6g018310 | 84.916 | 179 | 26 | 1 | 4 | 181 | 2 | 180 | 1.72e-114 | 323 |
| MS.gene76905.t1 | MTR_6g018300 | 84.358 | 179 | 24 | 2 | 4 | 181 | 2 | 177 | 9.49e-112 | 316 |
| MS.gene76905.t1 | MTR_7g007210 | 94.805 | 154 | 8 | 0 | 11 | 164 | 11 | 164 | 2.51e-110 | 313 |
| MS.gene76905.t1 | MTR_4g127870 | 50.641 | 156 | 73 | 3 | 28 | 180 | 15 | 169 | 1.12e-57 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76905.t1 | AT1G67090 | 71.429 | 182 | 47 | 2 | 1 | 181 | 1 | 178 | 1.08e-93 | 270 |
| MS.gene76905.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 1.06e-92 | 268 |
| MS.gene76905.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 1.06e-92 | 268 |
| MS.gene76905.t1 | AT5G38410 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 2.07e-92 | 267 |
| MS.gene76905.t1 | AT5G38420 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 6.85e-92 | 266 |
| MS.gene76905.t1 | AT5G38410 | 68.449 | 187 | 49 | 3 | 1 | 181 | 1 | 183 | 3.68e-90 | 261 |
| MS.gene76905.t1 | AT5G38410 | 67.582 | 182 | 47 | 3 | 1 | 181 | 1 | 171 | 1.28e-85 | 249 |
| MS.gene76905.t1 | AT1G67090 | 65.217 | 115 | 35 | 2 | 1 | 114 | 1 | 111 | 1.72e-45 | 146 |
Find 52 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.242109 | 7.2:-91241862 | MS.gene76905:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.2:+91241849 | None:intergenic |
| TCTTTGTTGATCTTTGTAAC+TGG | 0.311725 | 7.2:+91242164 | None:intergenic |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.2:-91241840 | MS.gene76905:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.2:-91241639 | MS.gene76905:CDS |
| TTCTTTAGCCAATTGTTCTC+TGG | 0.392107 | 7.2:+91241880 | None:intergenic |
| CGATTCTTCTCAAGTGTTGA+AGG | 0.396980 | 7.2:-91241584 | MS.gene76905:CDS |
| TCTTCCACCATTGCTTGTAA+TGG | 0.401668 | 7.2:+91242133 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.402581 | 7.2:-91241888 | MS.gene76905:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.2:-91241613 | MS.gene76905:CDS |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.422643 | 7.2:+91241887 | None:intergenic |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.2:-91242240 | MS.gene76905:CDS |
| ATTCGTTGGACTCAAGTCTA+TGG | 0.435719 | 7.2:-91242195 | MS.gene76905:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435806 | 7.2:+91241929 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.2:+91241535 | None:intergenic |
| CTTCAACACTTGAGAAGAAT+CGG | 0.461194 | 7.2:+91241585 | None:intergenic |
| GGCGCGGTGGCTCCATTCGT+TGG | 0.461846 | 7.2:-91242209 | MS.gene76905:CDS |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.2:-91241532 | MS.gene76905:CDS |
| CTTTGTTGATCTTTGTAACT+GGG | 0.495423 | 7.2:+91242165 | None:intergenic |
| CTCAAAATTTAGTAGACTGC+AGG | 0.495678 | 7.2:+91241460 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.2:-91241853 | MS.gene76905:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.2:+91241932 | None:intergenic |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.2:-91241858 | MS.gene76905:CDS |
| CGTGCCTCTTCGGTACAATC+CGG | 0.524408 | 7.2:-91242230 | MS.gene76905:CDS |
| GTTGGACTCAAGTCTATGGC+TGG | 0.525967 | 7.2:-91242191 | MS.gene76905:CDS |
| TCCACCATTGCTTGTAATGG+AGG | 0.530318 | 7.2:+91242136 | None:intergenic |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.2:+91241653 | None:intergenic |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.2:-91241661 | MS.gene76905:CDS |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.2:-91241852 | MS.gene76905:CDS |
| AACGAATGGAGCCACCGCGC+CGG | 0.560979 | 7.2:+91242211 | None:intergenic |
| AGCTGAAGAGGACATGATAG+AGG | 0.561007 | 7.2:+91242268 | None:intergenic |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.2:-91241857 | MS.gene76905:CDS |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.2:+91241643 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.2:-91241649 | MS.gene76905:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.2:+91241521 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.2:+91241662 | None:intergenic |
| AACTGTAGTCACAGCTGAAG+AGG | 0.597051 | 7.2:+91242256 | None:intergenic |
| GAATCGGTTGCTCCAAACAA+AGG | 0.598394 | 7.2:+91241601 | None:intergenic |
| ATTACCTCCATTACAAGCAA+TGG | 0.604904 | 7.2:-91242140 | MS.gene76905:CDS |
| AATTGTTCTCTGGTCAATGG+TGG | 0.606631 | 7.2:+91241890 | None:intergenic |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.2:-91241825 | MS.gene76905:intron |
| ACCTCCATTACAAGCAATGG+TGG | 0.613355 | 7.2:-91242137 | MS.gene76905:CDS |
| TTCGGTACAATCCGGCGCGG+TGG | 0.614407 | 7.2:-91242222 | MS.gene76905:CDS |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.2:+91241894 | None:intergenic |
| CGGATTGTACCGAAGAGGCA+CGG | 0.641462 | 7.2:+91242231 | None:intergenic |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.2:-91242117 | MS.gene76905:intron |
| ATAGACTTGAGTCCAACGAA+TGG | 0.654896 | 7.2:+91242197 | None:intergenic |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.2:+91241536 | None:intergenic |
| CGCGCCGGATTGTACCGAAG+AGG | 0.661856 | 7.2:+91242226 | None:intergenic |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.2:+91241528 | None:intergenic |
| CTCTTCGGTACAATCCGGCG+CGG | 0.696951 | 7.2:-91242225 | MS.gene76905:CDS |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.2:-91241630 | MS.gene76905:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACCATTTTGTGAAATTTT+AGG | - | chr7.2:91241783-91241802 | MS.gene76905:intron | 20.0% |
| ! | ACACCTAAAATTTCACAAAA+TGG | + | chr7.2:91241789-91241808 | None:intergenic | 25.0% |
| ! | AGTAAATGAATATTAGACCT+CGG | + | chr7.2:91241938-91241957 | None:intergenic | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.2:91241881-91241900 | MS.gene76905:CDS | 25.0% |
| !! | TATATTTTCATAAGCTCTTC+AGG | - | chr7.2:91241690-91241709 | MS.gene76905:intron | 25.0% |
| !!! | ATTTTGTGAAATTTTAGGTG+TGG | - | chr7.2:91241788-91241807 | MS.gene76905:intron | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.2:91242034-91242053 | MS.gene76905:intron | 25.0% |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.2:91241885-91241904 | MS.gene76905:CDS | 30.0% | |
| ATAAGCACTTATAGATTCGT+TGG | - | chr7.2:91241741-91241760 | MS.gene76905:intron | 30.0% | |
| CTTTGTTGATCTTTGTAACT+GGG | + | chr7.2:91241581-91241600 | None:intergenic | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.2:91241886-91241905 | MS.gene76905:CDS | 30.0% | |
| TCTTTGTTGATCTTTGTAAC+TGG | + | chr7.2:91241582-91241601 | None:intergenic | 30.0% | |
| ATTACCTCCATTACAAGCAA+TGG | - | chr7.2:91241603-91241622 | MS.gene76905:CDS | 35.0% | |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.2:91241890-91241909 | MS.gene76905:CDS | 35.0% | |
| CTTCAACACTTGAGAAGAAT+CGG | + | chr7.2:91242161-91242180 | None:intergenic | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.2:91241817-91241836 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.2:91241891-91241910 | MS.gene76905:CDS | 35.0% | |
| TTCTTTAGCCAATTGTTCTC+TGG | + | chr7.2:91241866-91241885 | None:intergenic | 35.0% | |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.2:91241814-91241833 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.2:91242094-91242113 | MS.gene76905:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.2:91241856-91241875 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.2:91241855-91241874 | MS.gene76905:CDS | 40.0% | |
| ATAGACTTGAGTCCAACGAA+TGG | + | chr7.2:91241549-91241568 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.2:91242130-91242149 | MS.gene76905:CDS | 40.0% | |
| ATTCGTTGGACTCAAGTCTA+TGG | - | chr7.2:91241548-91241567 | MS.gene76905:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.2:91242003-91242022 | None:intergenic | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.2:91242049-91242068 | MS.gene76905:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.2:91242103-91242122 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.2:91241613-91241632 | None:intergenic | 40.0% | |
| !! | CGATTCTTCTCAAGTGTTGA+AGG | - | chr7.2:91242159-91242178 | MS.gene76905:CDS | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.2:91242104-91242123 | MS.gene76905:intron | 40.0% |
| AACTGTAGTCACAGCTGAAG+AGG | + | chr7.2:91241490-91241509 | None:intergenic | 45.0% | |
| ACCTCCATTACAAGCAATGG+TGG | - | chr7.2:91241606-91241625 | MS.gene76905:CDS | 45.0% | |
| AGCTGAAGAGGACATGATAG+AGG | + | chr7.2:91241478-91241497 | None:intergenic | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.2:91242113-91242132 | MS.gene76905:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.2:91241897-91241916 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.2:91242093-91242112 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.2:91242225-91242244 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.2:91242218-91242237 | None:intergenic | 45.0% | |
| GAATCGGTTGCTCCAAACAA+AGG | + | chr7.2:91242145-91242164 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.2:91242211-91242230 | MS.gene76905:CDS | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.2:91241859-91241878 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.2:91241503-91241522 | MS.gene76905:CDS | 45.0% | |
| TCCACCATTGCTTGTAATGG+AGG | + | chr7.2:91241610-91241629 | None:intergenic | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.2:91241626-91241645 | MS.gene76905:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.2:91241918-91241937 | MS.gene76905:CDS | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.2:91242211-91242230 | None:intergenic | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.2:91242210-91242229 | None:intergenic | 45.0% |
| !! | TTTTAGGTGTGGCCTCCTAT+TGG | - | chr7.2:91241799-91241818 | MS.gene76905:intron | 45.0% |
| GTTGGACTCAAGTCTATGGC+TGG | - | chr7.2:91241552-91241571 | MS.gene76905:CDS | 50.0% | |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.2:91242084-91242103 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.2:91241852-91241871 | None:intergenic | 50.0% |
| !! | TCGTTGTTTTGTCGCGACCA+AGG | - | chr7.2:91241983-91242002 | MS.gene76905:intron | 50.0% |
| CGGATTGTACCGAAGAGGCA+CGG | + | chr7.2:91241515-91241534 | None:intergenic | 55.0% | |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.2:91242082-91242101 | MS.gene76905:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+CGG | - | chr7.2:91241513-91241532 | MS.gene76905:CDS | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.2:91241903-91241922 | MS.gene76905:CDS | 55.0% |
| CTCTTCGGTACAATCCGGCG+CGG | - | chr7.2:91241518-91241537 | MS.gene76905:CDS | 60.0% | |
| AACGAATGGAGCCACCGCGC+CGG | + | chr7.2:91241535-91241554 | None:intergenic | 65.0% | |
| CGCGCCGGATTGTACCGAAG+AGG | + | chr7.2:91241520-91241539 | None:intergenic | 65.0% | |
| TTCGGTACAATCCGGCGCGG+TGG | - | chr7.2:91241521-91241540 | MS.gene76905:CDS | 65.0% | |
| GGCGCGGTGGCTCCATTCGT+TGG | - | chr7.2:91241534-91241553 | MS.gene76905:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 91241468 | 91242297 | 91241468 | ID=MS.gene76905 |
| chr7.2 | mRNA | 91241468 | 91242297 | 91241468 | ID=MS.gene76905.t1;Parent=MS.gene76905 |
| chr7.2 | exon | 91242118 | 91242297 | 91242118 | ID=MS.gene76905.t1.exon1;Parent=MS.gene76905.t1 |
| chr7.2 | CDS | 91242118 | 91242297 | 91242118 | ID=cds.MS.gene76905.t1;Parent=MS.gene76905.t1 |
| chr7.2 | exon | 91241826 | 91241960 | 91241826 | ID=MS.gene76905.t1.exon2;Parent=MS.gene76905.t1 |
| chr7.2 | CDS | 91241826 | 91241960 | 91241826 | ID=cds.MS.gene76905.t1;Parent=MS.gene76905.t1 |
| chr7.2 | exon | 91241468 | 91241698 | 91241468 | ID=MS.gene76905.t1.exon3;Parent=MS.gene76905.t1 |
| chr7.2 | CDS | 91241468 | 91241698 | 91241468 | ID=cds.MS.gene76905.t1;Parent=MS.gene76905.t1 |
| Gene Sequence |
| Protein sequence |
