Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92216.t1 | XP_013447451.1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 4.20E-94 | 354 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92216.t1 | P07689 | 83.8 | 179 | 29 | 0 | 3 | 181 | 2 | 180 | 1.4e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92216.t1 | A0A072U6Q1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 3.0e-94 | 354.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92216 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene92216 | 0.930685 | 1.14E-93 | -1.69E-46 |
| MS.gene049173 | MS.gene92216 | 0.903064 | 5.10E-79 | -1.69E-46 |
| MS.gene049217 | MS.gene92216 | 0.89227 | 1.85E-74 | -1.69E-46 |
| MS.gene049222 | MS.gene92216 | 0.888167 | 7.51E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene92216 | 0.835871 | 1.30E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene92216 | 0.943694 | 7.58E-103 | -1.69E-46 |
| MS.gene049320 | MS.gene92216 | 0.92942 | 7.13E-93 | -1.69E-46 |
| MS.gene04939 | MS.gene92216 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene92216 | 0.876638 | 1.19E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene92216 | 0.890446 | 9.78E-74 | -1.69E-46 |
| MS.gene049805 | MS.gene92216 | 0.850406 | 1.73E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene92216 | 0.876574 | 1.25E-68 | -1.69E-46 |
| MS.gene050163 | MS.gene92216 | 0.906223 | 1.87E-80 | -1.69E-46 |
| MS.gene050165 | MS.gene92216 | 0.904664 | 9.69E-80 | -1.69E-46 |
| MS.gene050170 | MS.gene92216 | 0.833876 | 4.15E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene92216 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene92216 | 0.861266 | 1.16E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene92216 | 0.897824 | 9.66E-77 | -1.69E-46 |
| MS.gene050444 | MS.gene92216 | 0.860336 | 2.22E-63 | -1.69E-46 |
| MS.gene050496 | MS.gene92216 | 0.849459 | 3.19E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene92216 | 0.909028 | 8.95E-82 | -1.69E-46 |
| MS.gene050518 | MS.gene92216 | 0.911149 | 8.43E-83 | -1.69E-46 |
| MS.gene050538 | MS.gene92216 | 0.804443 | 2.16E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene92216 | 0.879169 | 1.55E-69 | -1.69E-46 |
| MS.gene050593 | MS.gene92216 | 0.830943 | 2.21E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene92216 | 0.925954 | 9.10E-91 | -1.69E-46 |
| MS.gene050662 | MS.gene92216 | 0.827889 | 1.22E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene92216 | 0.896404 | 3.81E-76 | -1.69E-46 |
| MS.gene050686 | MS.gene92216 | 0.814206 | 1.73E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene92216 | 0.932646 | 6.23E-95 | -1.69E-46 |
| MS.gene050747 | MS.gene92216 | 0.836943 | 6.96E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene92216 | 0.912823 | 1.25E-83 | -1.69E-46 |
| MS.gene05080 | MS.gene92216 | 0.872263 | 3.64E-67 | -1.69E-46 |
| MS.gene05081 | MS.gene92216 | 0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene92216 | 0.853176 | 2.84E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene92216 | 0.849069 | 4.10E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene92216 | 0.832292 | 1.03E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene92216 | 0.823166 | 1.60E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene92216 | 0.829777 | 4.26E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene92216 | 0.902532 | 8.81E-79 | -1.69E-46 |
| MS.gene05100 | MS.gene92216 | 0.878797 | 2.10E-69 | -1.69E-46 |
| MS.gene051228 | MS.gene92216 | 0.862314 | 5.53E-64 | -1.69E-46 |
| MS.gene051317 | MS.gene92216 | 0.870934 | 1.00E-66 | -1.69E-46 |
| MS.gene051366 | MS.gene92216 | -0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene051434 | MS.gene92216 | 0.817273 | 3.59E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene92216 | 0.880203 | 6.66E-70 | -1.69E-46 |
| MS.gene051617 | MS.gene92216 | 0.803383 | 3.58E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene92216 | -0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene92216 | 0.846631 | 1.92E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene92216 | 0.913498 | 5.74E-84 | -1.69E-46 |
| MS.gene051838 | MS.gene92216 | 0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene92216 | 0.863845 | 1.86E-64 | -1.69E-46 |
| MS.gene051949 | MS.gene92216 | 0.889141 | 3.16E-73 | -1.69E-46 |
| MS.gene052164 | MS.gene92216 | 0.846584 | 1.98E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene92216 | 0.891698 | 3.13E-74 | -1.69E-46 |
| MS.gene052379 | MS.gene92216 | 0.849529 | 3.05E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene92216 | 0.844517 | 7.20E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene92216 | 0.801238 | 9.89E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene92216 | 0.846949 | 1.57E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene92216 | 0.855633 | 5.54E-62 | -1.69E-46 |
| MS.gene052504 | MS.gene92216 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene92216 | 0.855993 | 4.34E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene92216 | 0.867987 | 9.12E-66 | -1.69E-46 |
| MS.gene052820 | MS.gene92216 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene92216 | 0.869919 | 2.16E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene92216 | 0.841861 | 3.67E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene92216 | 0.839717 | 1.34E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene92216 | 0.845899 | 3.04E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene92216 | 0.861884 | 7.49E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene92216 | 0.864632 | 1.06E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene92216 | 0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene92216 | 0.834965 | 2.21E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene92216 | 0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene92216 | 0.858953 | 5.78E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene92216 | 0.861392 | 1.06E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene92216 | 0.901976 | 1.55E-78 | -1.69E-46 |
| MS.gene053286 | MS.gene92216 | 0.899695 | 1.54E-77 | -1.69E-46 |
| MS.gene053322 | MS.gene92216 | 0.840047 | 1.10E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene92216 | 0.81505 | 1.13E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene92216 | 0.822166 | 2.74E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene92216 | 0.844972 | 5.43E-59 | -1.69E-46 |
| MS.gene053561 | MS.gene92216 | -0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene92216 | 0.8566 | 2.88E-62 | -1.69E-46 |
| MS.gene053632 | MS.gene92216 | 0.90119 | 3.44E-78 | -1.69E-46 |
| MS.gene053824 | MS.gene92216 | 0.873852 | 1.07E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene92216 | 0.877279 | 7.14E-69 | -1.69E-46 |
| MS.gene054408 | MS.gene92216 | 0.809115 | 2.22E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene92216 | 0.840435 | 8.71E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene92216 | 0.892871 | 1.06E-74 | -1.69E-46 |
| MS.gene054642 | MS.gene92216 | 0.937525 | 3.01E-98 | -1.69E-46 |
| MS.gene05470 | MS.gene92216 | 0.859947 | 2.91E-63 | -1.69E-46 |
| MS.gene054927 | MS.gene92216 | 0.804677 | 1.93E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene92216 | 0.932396 | 9.08E-95 | -1.69E-46 |
| MS.gene054959 | MS.gene92216 | -0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene92216 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene055134 | MS.gene92216 | -0.80686 | 6.70E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene92216 | -0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene92216 | 0.886721 | 2.67E-72 | -1.69E-46 |
| MS.gene055212 | MS.gene92216 | 0.832583 | 8.70E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene92216 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene92216 | 0.821811 | 3.31E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene92216 | 0.930003 | 3.08E-93 | -1.69E-46 |
| MS.gene055397 | MS.gene92216 | 0.837974 | 3.79E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene92216 | 0.806563 | 7.74E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene92216 | 0.914449 | 1.89E-84 | -1.69E-46 |
| MS.gene055577 | MS.gene92216 | 0.887505 | 1.35E-72 | -1.69E-46 |
| MS.gene055634 | MS.gene92216 | 0.832022 | 1.20E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene92216 | 0.845175 | 4.78E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene92216 | 0.858719 | 6.79E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene92216 | 0.849105 | 4.00E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene92216 | 0.895757 | 7.07E-76 | -1.69E-46 |
| MS.gene055748 | MS.gene92216 | 0.875525 | 2.88E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene92216 | 0.860228 | 2.39E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene92216 | 0.880325 | 6.02E-70 | -1.69E-46 |
| MS.gene055776 | MS.gene92216 | 0.892315 | 1.78E-74 | -1.69E-46 |
| MS.gene055849 | MS.gene92216 | 0.833128 | 6.37E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene92216 | 0.851305 | 9.68E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene92216 | 0.856018 | 4.27E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene92216 | 0.866623 | 2.49E-65 | -1.69E-46 |
| MS.gene055942 | MS.gene92216 | -0.82261 | 2.16E-53 | -1.69E-46 |
| MS.gene055956 | MS.gene92216 | -0.86479 | 9.44E-65 | -1.69E-46 |
| MS.gene056046 | MS.gene92216 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene92216 | 0.84975 | 2.65E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene92216 | 0.891727 | 3.05E-74 | -1.69E-46 |
| MS.gene056409 | MS.gene92216 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene056487 | MS.gene92216 | 0.811982 | 5.33E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene92216 | 0.890785 | 7.20E-74 | -1.69E-46 |
| MS.gene056510 | MS.gene92216 | 0.911088 | 9.03E-83 | -1.69E-46 |
| MS.gene056549 | MS.gene92216 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene056550 | MS.gene92216 | -0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene92216 | 0.811112 | 8.24E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene92216 | 0.932461 | 8.23E-95 | -1.69E-46 |
| MS.gene056692 | MS.gene92216 | 0.854714 | 1.02E-61 | -1.69E-46 |
| MS.gene056761 | MS.gene92216 | -0.805868 | 1.08E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene92216 | 0.830949 | 2.20E-55 | -1.69E-46 |
| MS.gene056946 | MS.gene92216 | 0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene92216 | 0.865361 | 6.25E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene92216 | 0.871736 | 5.44E-67 | -1.69E-46 |
| MS.gene057196 | MS.gene92216 | 0.810838 | 9.45E-51 | -1.69E-46 |
| MS.gene057246 | MS.gene92216 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene92216 | 0.859417 | 4.20E-63 | -1.69E-46 |
| MS.gene057332 | MS.gene92216 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene92216 | 0.886528 | 3.16E-72 | -1.69E-46 |
| MS.gene057658 | MS.gene92216 | 0.838347 | 3.04E-57 | -1.69E-46 |
| MS.gene057831 | MS.gene92216 | 0.854846 | 9.37E-62 | -1.69E-46 |
| MS.gene057857 | MS.gene92216 | 0.808537 | 2.95E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene92216 | 0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene92216 | 0.84418 | 8.87E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene92216 | -0.842003 | 3.37E-58 | -1.69E-46 |
| MS.gene058338 | MS.gene92216 | 0.853719 | 1.98E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene92216 | 0.827263 | 1.72E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene92216 | 0.947258 | 9.55E-106 | -1.69E-46 |
| MS.gene058544 | MS.gene92216 | 0.884412 | 1.96E-71 | -1.69E-46 |
| MS.gene058719 | MS.gene92216 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene92216 | 0.903186 | 4.50E-79 | -1.69E-46 |
| MS.gene058773 | MS.gene92216 | 0.895964 | 5.81E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene92216 | 0.871526 | 6.39E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene92216 | 0.92397 | 1.31E-89 | -1.69E-46 |
| MS.gene059023 | MS.gene92216 | 0.895798 | 6.80E-76 | -1.69E-46 |
| MS.gene059029 | MS.gene92216 | 0.873368 | 1.55E-67 | -1.69E-46 |
| MS.gene059079 | MS.gene92216 | 0.82589 | 3.66E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene92216 | 0.819579 | 1.08E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene92216 | 0.862354 | 5.38E-64 | -1.69E-46 |
| MS.gene05914 | MS.gene92216 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene92216 | 0.84912 | 3.96E-60 | -1.69E-46 |
| MS.gene059536 | MS.gene92216 | 0.800587 | 1.34E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene92216 | 0.941611 | 3.08E-101 | -1.69E-46 |
| MS.gene059699 | MS.gene92216 | -0.806277 | 8.90E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene92216 | -0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene92216 | 0.904459 | 1.20E-79 | -1.69E-46 |
| MS.gene059756 | MS.gene92216 | 0.890153 | 1.27E-73 | -1.69E-46 |
| MS.gene059801 | MS.gene92216 | 0.831449 | 1.66E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene92216 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene92216 | 0.89372 | 4.83E-75 | -1.69E-46 |
| MS.gene059902 | MS.gene92216 | 0.856128 | 3.97E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene92216 | 0.829785 | 4.24E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene92216 | 0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene92216 | 0.818281 | 2.13E-52 | -1.69E-46 |
| MS.gene060336 | MS.gene92216 | -0.800369 | 1.49E-48 | -1.69E-46 |
| MS.gene060337 | MS.gene92216 | -0.843143 | 1.68E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene92216 | 0.845977 | 2.90E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene92216 | 0.819549 | 1.10E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene92216 | 0.900131 | 9.95E-78 | -1.69E-46 |
| MS.gene060727 | MS.gene92216 | 0.818527 | 1.87E-52 | -1.69E-46 |
| MS.gene060728 | MS.gene92216 | 0.841205 | 5.47E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene92216 | 0.892183 | 2.01E-74 | -1.69E-46 |
| MS.gene060778 | MS.gene92216 | 0.815222 | 1.03E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene92216 | 0.876336 | 1.51E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene92216 | 0.824014 | 1.02E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene92216 | 0.815311 | 9.86E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene92216 | 0.835946 | 1.25E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene92216 | 0.861149 | 1.26E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene92216 | 0.883701 | 3.59E-71 | -1.69E-46 |
| MS.gene061041 | MS.gene92216 | 0.801559 | 8.51E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene92216 | 0.899605 | 1.68E-77 | -1.69E-46 |
| MS.gene061200 | MS.gene92216 | 0.842313 | 2.79E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92216 | MS.gene074248 | PPI |
| MS.gene92216 | MS.gene92218 | PPI |
| MS.gene92216 | MS.gene54468 | PPI |
| MS.gene92216 | MS.gene074567 | PPI |
| MS.gene92216 | MS.gene76908 | PPI |
| MS.gene074249 | MS.gene92216 | PPI |
| MS.gene54465 | MS.gene92216 | PPI |
| MS.gene80966 | MS.gene92216 | PPI |
| MS.gene92216 | MS.gene074568 | PPI |
| MS.gene92216 | MS.gene80971 | PPI |
| MS.gene92216 | MS.gene074566 | PPI |
| MS.gene92216 | MS.gene92220 | PPI |
| MS.gene92216 | MS.gene074247 | PPI |
| MS.gene92216 | MS.gene92217 | PPI |
| MS.gene92216 | MS.gene76905 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92216.t1 | MTR_7g007120 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 1.23e-123 | 346 |
| MS.gene92216.t1 | MTR_7g007200 | 93.567 | 171 | 11 | 0 | 11 | 181 | 11 | 181 | 2.25e-123 | 345 |
| MS.gene92216.t1 | MTR_7g007220 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 2.27e-123 | 345 |
| MS.gene92216.t1 | MTR_7g007120 | 94.118 | 170 | 10 | 0 | 12 | 181 | 12 | 181 | 4.95e-123 | 344 |
| MS.gene92216.t1 | MTR_7g007120 | 93.567 | 171 | 11 | 0 | 11 | 181 | 11 | 181 | 6.37e-123 | 344 |
| MS.gene92216.t1 | MTR_7g007230 | 92.353 | 170 | 13 | 0 | 12 | 181 | 12 | 181 | 3.57e-120 | 337 |
| MS.gene92216.t1 | MTR_6g018310 | 83.799 | 179 | 28 | 1 | 4 | 181 | 2 | 180 | 7.16e-114 | 321 |
| MS.gene92216.t1 | MTR_6g018300 | 83.240 | 179 | 26 | 2 | 4 | 181 | 2 | 177 | 4.81e-111 | 314 |
| MS.gene92216.t1 | MTR_7g007210 | 94.156 | 154 | 9 | 0 | 11 | 164 | 11 | 164 | 1.65e-109 | 310 |
| MS.gene92216.t1 | MTR_4g127870 | 48.810 | 168 | 81 | 4 | 17 | 180 | 3 | 169 | 3.92e-58 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92216.t1 | AT1G67090 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 6.21e-93 | 268 |
| MS.gene92216.t1 | AT5G38430 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 6.01e-92 | 266 |
| MS.gene92216.t1 | AT5G38430 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 6.01e-92 | 266 |
| MS.gene92216.t1 | AT5G38410 | 69.231 | 182 | 51 | 2 | 1 | 181 | 1 | 178 | 1.24e-91 | 265 |
| MS.gene92216.t1 | AT5G38420 | 69.231 | 182 | 51 | 2 | 1 | 181 | 1 | 178 | 3.70e-91 | 264 |
| MS.gene92216.t1 | AT5G38410 | 67.380 | 187 | 51 | 3 | 1 | 181 | 1 | 183 | 2.39e-89 | 259 |
| MS.gene92216.t1 | AT5G38410 | 66.484 | 182 | 49 | 3 | 1 | 181 | 1 | 171 | 1.02e-84 | 247 |
| MS.gene92216.t1 | AT1G67090 | 64.348 | 115 | 36 | 2 | 1 | 114 | 1 | 111 | 3.97e-45 | 145 |
Find 49 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.244592 | 7.1:-87145052 | MS.gene92216:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.1:+87145039 | None:intergenic |
| TCTTTGTTGATCTTTGTAAC+TGG | 0.311725 | 7.1:+87145354 | None:intergenic |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.1:-87145030 | MS.gene92216:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.1:-87144829 | MS.gene92216:CDS |
| ACCATTGACCAGAGAACAAT+TGG | 0.397843 | 7.1:-87145078 | MS.gene92216:CDS |
| TGATGCTTCTCAAGTGTTGA+AGG | 0.410018 | 7.1:-87144774 | MS.gene92216:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.1:-87144803 | MS.gene92216:CDS |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.416317 | 7.1:+87145077 | None:intergenic |
| TCTTCCACCATTGCTTGTAA+TGG | 0.422658 | 7.1:+87145323 | None:intergenic |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.1:-87145430 | MS.gene92216:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435806 | 7.1:+87145119 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.1:+87144725 | None:intergenic |
| GGCGTGGCGGCTCCATTCGT+TGG | 0.466438 | 7.1:-87145399 | MS.gene92216:CDS |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.1:-87144722 | MS.gene92216:CDS |
| CGTGCCTCTTCGGTACAATC+TGG | 0.487772 | 7.1:-87145420 | MS.gene92216:CDS |
| CTTTGTTGATCTTTGTAACT+GGG | 0.495423 | 7.1:+87145355 | None:intergenic |
| CTCAAAATTTAGTAGACTGC+AGG | 0.495678 | 7.1:+87144650 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.1:-87145043 | MS.gene92216:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.1:+87145122 | None:intergenic |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.1:-87145048 | MS.gene92216:CDS |
| ATTACTTCCATTACAAGCAA+TGG | 0.539617 | 7.1:-87145330 | MS.gene92216:CDS |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.1:+87144843 | None:intergenic |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.1:-87144851 | MS.gene92216:CDS |
| GTTGGACTAAAGTCCATGGC+TGG | 0.555609 | 7.1:-87145381 | MS.gene92216:CDS |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.1:-87145042 | MS.gene92216:CDS |
| AGCTGAAGAGGACATGATAG+AGG | 0.561007 | 7.1:+87145458 | None:intergenic |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.1:-87145047 | MS.gene92216:CDS |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.1:+87144833 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.1:-87144839 | MS.gene92216:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.1:+87144711 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.1:+87144852 | None:intergenic |
| AACTGTAGTCACAGCTGAAG+AGG | 0.597051 | 7.1:+87145446 | None:intergenic |
| GCATCAGTTGCTCCAAACAA+AGG | 0.598394 | 7.1:+87144791 | None:intergenic |
| CACGCCAGATTGTACCGAAG+AGG | 0.605699 | 7.1:+87145416 | None:intergenic |
| ATTCGTTGGACTAAAGTCCA+TGG | 0.609669 | 7.1:-87145385 | MS.gene92216:CDS |
| ACTTCCATTACAAGCAATGG+TGG | 0.610706 | 7.1:-87145327 | MS.gene92216:CDS |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.1:-87145015 | MS.gene92216:intron |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.1:+87145368 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.1:+87145084 | None:intergenic |
| CTCTTCGGTACAATCTGGCG+TGG | 0.620770 | 7.1:-87145415 | MS.gene92216:CDS |
| ATGGACTTTAGTCCAACGAA+TGG | 0.623442 | 7.1:+87145387 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.637841 | 7.1:+87145080 | None:intergenic |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.1:-87145307 | MS.gene92216:intron |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.1:+87144726 | None:intergenic |
| CAGATTGTACCGAAGAGGCA+CGG | 0.664722 | 7.1:+87145421 | None:intergenic |
| TTCGGTACAATCTGGCGTGG+CGG | 0.667454 | 7.1:-87145412 | MS.gene92216:CDS |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.1:+87144718 | None:intergenic |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.1:-87144820 | MS.gene92216:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGTAAAGTAATATTAGACCT+CGG | + | chr7.1:87145128-87145147 | None:intergenic | 25.0% |
| ! | ATAAGCACTTATAGATTCAT+TGG | - | chr7.1:87144931-87144950 | MS.gene92216:intron | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.1:87145071-87145090 | MS.gene92216:CDS | 25.0% |
| !! | TATATTTTCATAAGCTCTTC+AGG | - | chr7.1:87144880-87144899 | MS.gene92216:intron | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.1:87145224-87145243 | MS.gene92216:intron | 25.0% |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.1:87145075-87145094 | MS.gene92216:CDS | 30.0% | |
| ATTACTTCCATTACAAGCAA+TGG | - | chr7.1:87144793-87144812 | MS.gene92216:CDS | 30.0% | |
| CTTTGTTGATCTTTGTAACT+GGG | + | chr7.1:87144771-87144790 | None:intergenic | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.1:87145076-87145095 | MS.gene92216:CDS | 30.0% | |
| TCTTTGTTGATCTTTGTAAC+TGG | + | chr7.1:87144772-87144791 | None:intergenic | 30.0% | |
| !!! | ACAAGTTTGTTAACCCTTTT+GGG | - | chr7.1:87144963-87144982 | MS.gene92216:intron | 30.0% |
| ACACCTAAAATTGCCCAAAA+GGG | + | chr7.1:87144979-87144998 | None:intergenic | 35.0% | |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.1:87145080-87145099 | MS.gene92216:CDS | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.1:87145007-87145026 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.1:87145081-87145100 | MS.gene92216:CDS | 35.0% | |
| ! | TAACCCTTTTGGGCAATTTT+AGG | - | chr7.1:87144973-87144992 | MS.gene92216:intron | 35.0% |
| ! | TTCTTTTGCCAATTGTTCTC+TGG | + | chr7.1:87145056-87145075 | None:intergenic | 35.0% |
| !!! | CACAAGTTTGTTAACCCTTT+TGG | - | chr7.1:87144962-87144981 | MS.gene92216:intron | 35.0% |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.1:87145004-87145023 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.1:87145284-87145303 | MS.gene92216:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.1:87145046-87145065 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.1:87145045-87145064 | MS.gene92216:CDS | 40.0% | |
| ACTTCCATTACAAGCAATGG+TGG | - | chr7.1:87144796-87144815 | MS.gene92216:CDS | 40.0% | |
| ATGGACTTTAGTCCAACGAA+TGG | + | chr7.1:87144739-87144758 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.1:87145320-87145339 | MS.gene92216:CDS | 40.0% | |
| ATTCGTTGGACTAAAGTCCA+TGG | - | chr7.1:87144738-87144757 | MS.gene92216:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.1:87145193-87145212 | None:intergenic | 40.0% | |
| CACACCTAAAATTGCCCAAA+AGG | + | chr7.1:87144980-87144999 | None:intergenic | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.1:87145239-87145258 | MS.gene92216:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.1:87145293-87145312 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.1:87144803-87144822 | None:intergenic | 40.0% | |
| !! | CTTTTGGGCAATTTTAGGTG+TGG | - | chr7.1:87144978-87144997 | MS.gene92216:intron | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.1:87145294-87145313 | MS.gene92216:intron | 40.0% |
| !! | TGATGCTTCTCAAGTGTTGA+AGG | - | chr7.1:87145349-87145368 | MS.gene92216:CDS | 40.0% |
| AACTGTAGTCACAGCTGAAG+AGG | + | chr7.1:87144680-87144699 | None:intergenic | 45.0% | |
| AGCTGAAGAGGACATGATAG+AGG | + | chr7.1:87144668-87144687 | None:intergenic | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.1:87145303-87145322 | MS.gene92216:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.1:87145087-87145106 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.1:87145283-87145302 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.1:87145415-87145434 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.1:87145408-87145427 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.1:87145401-87145420 | MS.gene92216:CDS | 45.0% | |
| GCATCAGTTGCTCCAAACAA+AGG | + | chr7.1:87145335-87145354 | None:intergenic | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.1:87145049-87145068 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.1:87144693-87144712 | MS.gene92216:CDS | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.1:87144816-87144835 | MS.gene92216:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.1:87145108-87145127 | MS.gene92216:CDS | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.1:87145401-87145420 | None:intergenic | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.1:87145400-87145419 | None:intergenic | 45.0% |
| !! | TTTTAGGTGTGGCCTCCTAT+TGG | - | chr7.1:87144989-87145008 | MS.gene92216:intron | 45.0% |
| CAGATTGTACCGAAGAGGCA+CGG | + | chr7.1:87144705-87144724 | None:intergenic | 50.0% | |
| GTTGGACTAAAGTCCATGGC+TGG | - | chr7.1:87144742-87144761 | MS.gene92216:CDS | 50.0% | |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.1:87145274-87145293 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.1:87145042-87145061 | None:intergenic | 50.0% |
| !! | TCGTTGTTTTGTCGCGACCA+AGG | - | chr7.1:87145173-87145192 | MS.gene92216:intron | 50.0% |
| CACGCCAGATTGTACCGAAG+AGG | + | chr7.1:87144710-87144729 | None:intergenic | 55.0% | |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.1:87145272-87145291 | MS.gene92216:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+TGG | - | chr7.1:87144703-87144722 | MS.gene92216:CDS | 55.0% | |
| CTCTTCGGTACAATCTGGCG+TGG | - | chr7.1:87144708-87144727 | MS.gene92216:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.1:87144758-87144777 | None:intergenic | 55.0% | |
| TTCGGTACAATCTGGCGTGG+CGG | - | chr7.1:87144711-87144730 | MS.gene92216:CDS | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.1:87145093-87145112 | MS.gene92216:CDS | 55.0% |
| GGCGTGGCGGCTCCATTCGT+TGG | - | chr7.1:87144724-87144743 | MS.gene92216:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87144658 | 87145487 | 87144658 | ID=MS.gene92216 |
| chr7.1 | mRNA | 87144658 | 87145487 | 87144658 | ID=MS.gene92216.t1;Parent=MS.gene92216 |
| chr7.1 | exon | 87145308 | 87145487 | 87145308 | ID=MS.gene92216.t1.exon1;Parent=MS.gene92216.t1 |
| chr7.1 | CDS | 87145308 | 87145487 | 87145308 | ID=cds.MS.gene92216.t1;Parent=MS.gene92216.t1 |
| chr7.1 | exon | 87145016 | 87145150 | 87145016 | ID=MS.gene92216.t1.exon2;Parent=MS.gene92216.t1 |
| chr7.1 | CDS | 87145016 | 87145150 | 87145016 | ID=cds.MS.gene92216.t1;Parent=MS.gene92216.t1 |
| chr7.1 | exon | 87144658 | 87144888 | 87144658 | ID=MS.gene92216.t1.exon3;Parent=MS.gene92216.t1 |
| chr7.1 | CDS | 87144658 | 87144888 | 87144658 | ID=cds.MS.gene92216.t1;Parent=MS.gene92216.t1 |
| Gene Sequence |
| Protein sequence |
