Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92218.t1 | XP_013447451.1 | 94.5 | 181 | 10 | 0 | 1 | 181 | 1 | 181 | 1.40E-94 | 355.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92218.t1 | P07689 | 85.5 | 179 | 26 | 0 | 3 | 181 | 2 | 180 | 7.2e-87 | 321.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92218.t1 | A0A072U6Q1 | 94.5 | 181 | 10 | 0 | 1 | 181 | 1 | 181 | 1.0e-94 | 355.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92218 | 0.812111 | 5.00E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene92218 | 0.896115 | 5.03E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene92218 | 0.905971 | 2.44E-80 | -1.69E-46 |
| MS.gene049217 | MS.gene92218 | 0.890785 | 7.19E-74 | -1.69E-46 |
| MS.gene049222 | MS.gene92218 | 0.890262 | 1.16E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene92218 | 0.857711 | 1.35E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene92218 | 0.930946 | 7.79E-94 | -1.69E-46 |
| MS.gene049320 | MS.gene92218 | 0.921069 | 5.74E-88 | -1.69E-46 |
| MS.gene049369 | MS.gene92218 | 0.826717 | 2.33E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene92218 | 0.819718 | 1.00E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene92218 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene92218 | 0.822868 | 1.88E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene92218 | 0.897753 | 1.04E-76 | -1.69E-46 |
| MS.gene049633 | MS.gene92218 | 0.865732 | 4.77E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene92218 | 0.859295 | 4.57E-63 | -1.69E-46 |
| MS.gene05010 | MS.gene92218 | 0.865557 | 5.42E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene92218 | 0.891082 | 5.49E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene92218 | 0.887867 | 9.78E-73 | -1.69E-46 |
| MS.gene050170 | MS.gene92218 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene92218 | 0.836263 | 1.04E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene92218 | 0.842068 | 3.24E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene92218 | 0.898938 | 3.25E-77 | -1.69E-46 |
| MS.gene050432 | MS.gene92218 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene92218 | 0.834223 | 3.39E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene92218 | 0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene92218 | 0.882823 | 7.54E-71 | -1.69E-46 |
| MS.gene050518 | MS.gene92218 | 0.889128 | 3.20E-73 | -1.69E-46 |
| MS.gene050538 | MS.gene92218 | 0.822719 | 2.04E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene92218 | 0.830698 | 2.54E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene92218 | 0.857476 | 1.59E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene92218 | 0.895435 | 9.62E-76 | -1.69E-46 |
| MS.gene050662 | MS.gene92218 | 0.860893 | 1.50E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene92218 | 0.883301 | 5.04E-71 | -1.69E-46 |
| MS.gene050686 | MS.gene92218 | 0.855915 | 4.58E-62 | -1.69E-46 |
| MS.gene050690 | MS.gene92218 | 0.812792 | 3.55E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene92218 | 0.893245 | 7.52E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene92218 | 0.853716 | 1.99E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene92218 | 0.849973 | 2.29E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene92218 | 0.853833 | 1.84E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene92218 | 0.937966 | 1.46E-98 | -1.69E-46 |
| MS.gene05080 | MS.gene92218 | 0.867518 | 1.29E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene92218 | 0.836616 | 8.43E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene92218 | 0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene050876 | MS.gene92218 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene92218 | 0.853052 | 3.08E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene92218 | 0.870831 | 1.08E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene92218 | 0.880463 | 5.38E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene92218 | 0.841202 | 5.48E-58 | -1.69E-46 |
| MS.gene051228 | MS.gene92218 | 0.888409 | 6.06E-73 | -1.69E-46 |
| MS.gene051317 | MS.gene92218 | 0.811844 | 5.71E-51 | -1.69E-46 |
| MS.gene051434 | MS.gene92218 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene92218 | 0.868895 | 4.65E-66 | -1.69E-46 |
| MS.gene051617 | MS.gene92218 | 0.803931 | 2.75E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene92218 | 0.863873 | 1.82E-64 | -1.69E-46 |
| MS.gene051692 | MS.gene92218 | 0.82132 | 4.30E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene92218 | 0.814214 | 1.73E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene92218 | 0.910422 | 1.91E-82 | -1.69E-46 |
| MS.gene051838 | MS.gene92218 | 0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene92218 | 0.884171 | 2.41E-71 | -1.69E-46 |
| MS.gene051874 | MS.gene92218 | 0.815423 | 9.31E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene92218 | 0.875947 | 2.06E-68 | -1.69E-46 |
| MS.gene052164 | MS.gene92218 | 0.843158 | 1.66E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene92218 | 0.912922 | 1.12E-83 | -1.69E-46 |
| MS.gene052290 | MS.gene92218 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene92218 | 0.860923 | 1.47E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene92218 | 0.819318 | 1.24E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene92218 | 0.817324 | 3.50E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene92218 | 0.831406 | 1.70E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene92218 | 0.822321 | 2.52E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene92218 | 0.842239 | 2.92E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene92218 | 0.850796 | 1.35E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene92218 | 0.86649 | 2.75E-65 | -1.69E-46 |
| MS.gene052822 | MS.gene92218 | 0.873938 | 9.97E-68 | -1.69E-46 |
| MS.gene052823 | MS.gene92218 | 0.829606 | 4.69E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene92218 | 0.822523 | 2.26E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene92218 | 0.85292 | 3.36E-61 | -1.69E-46 |
| MS.gene052872 | MS.gene92218 | 0.860119 | 2.58E-63 | -1.69E-46 |
| MS.gene052916 | MS.gene92218 | 0.890734 | 7.53E-74 | -1.69E-46 |
| MS.gene052966 | MS.gene92218 | 0.835325 | 1.79E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene92218 | 0.875217 | 3.67E-68 | -1.69E-46 |
| MS.gene053018 | MS.gene92218 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene92218 | 0.825522 | 4.48E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene92218 | 0.876714 | 1.12E-68 | -1.69E-46 |
| MS.gene053203 | MS.gene92218 | 0.834788 | 2.45E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene92218 | 0.86718 | 1.66E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene92218 | 0.914554 | 1.67E-84 | -1.69E-46 |
| MS.gene053286 | MS.gene92218 | 0.907739 | 3.66E-81 | -1.69E-46 |
| MS.gene053322 | MS.gene92218 | 0.869743 | 2.46E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene92218 | 0.807144 | 5.84E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene92218 | 0.829028 | 6.47E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene92218 | 0.829771 | 4.27E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene92218 | 0.801849 | 7.41E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene92218 | -0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene92218 | 0.896321 | 4.13E-76 | -1.69E-46 |
| MS.gene053626 | MS.gene92218 | 0.806411 | 8.33E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene92218 | 0.891333 | 4.37E-74 | -1.69E-46 |
| MS.gene053824 | MS.gene92218 | 0.862339 | 5.44E-64 | -1.69E-46 |
| MS.gene053912 | MS.gene92218 | 0.803582 | 3.25E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene92218 | 0.88487 | 1.32E-71 | -1.69E-46 |
| MS.gene054003 | MS.gene92218 | 0.811938 | 5.45E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene92218 | 0.821994 | 3.00E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene92218 | 0.82595 | 3.54E-54 | -1.69E-46 |
| MS.gene054543 | MS.gene92218 | 0.81217 | 4.85E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene92218 | 0.829207 | 5.86E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene92218 | 0.887227 | 1.72E-72 | -1.69E-46 |
| MS.gene054642 | MS.gene92218 | 0.937474 | 3.27E-98 | -1.69E-46 |
| MS.gene05470 | MS.gene92218 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene92218 | 0.824117 | 9.60E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene92218 | 0.90854 | 1.53E-81 | -1.69E-46 |
| MS.gene05505 | MS.gene92218 | 0.872812 | 2.39E-67 | -1.69E-46 |
| MS.gene055154 | MS.gene92218 | -0.820734 | 5.86E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene92218 | 0.869311 | 3.41E-66 | -1.69E-46 |
| MS.gene055212 | MS.gene92218 | 0.884911 | 1.28E-71 | -1.69E-46 |
| MS.gene055224 | MS.gene92218 | 0.835549 | 1.57E-56 | -1.69E-46 |
| MS.gene055254 | MS.gene92218 | 0.811815 | 5.80E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene92218 | 0.840234 | 9.83E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene92218 | 0.91238 | 2.08E-83 | -1.69E-46 |
| MS.gene055397 | MS.gene92218 | 0.857264 | 1.84E-62 | -1.69E-46 |
| MS.gene055499 | MS.gene92218 | 0.854788 | 9.75E-62 | -1.69E-46 |
| MS.gene055502 | MS.gene92218 | 0.898868 | 3.48E-77 | -1.69E-46 |
| MS.gene055577 | MS.gene92218 | 0.869888 | 2.21E-66 | -1.69E-46 |
| MS.gene055634 | MS.gene92218 | 0.832239 | 1.06E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene92218 | 0.864378 | 1.27E-64 | -1.69E-46 |
| MS.gene055638 | MS.gene92218 | 0.873848 | 1.07E-67 | -1.69E-46 |
| MS.gene055647 | MS.gene92218 | 0.866379 | 2.98E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene92218 | 0.929088 | 1.15E-92 | -1.69E-46 |
| MS.gene055748 | MS.gene92218 | 0.833896 | 4.10E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene92218 | 0.837901 | 3.95E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene92218 | 0.841001 | 6.19E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene92218 | 0.860885 | 1.51E-63 | -1.69E-46 |
| MS.gene055849 | MS.gene92218 | 0.834714 | 2.55E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene92218 | 0.830915 | 2.24E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene92218 | 0.897352 | 1.53E-76 | -1.69E-46 |
| MS.gene055941 | MS.gene92218 | 0.85634 | 3.44E-62 | -1.69E-46 |
| MS.gene055942 | MS.gene92218 | -0.800792 | 1.22E-48 | -1.69E-46 |
| MS.gene055956 | MS.gene92218 | -0.851126 | 1.09E-60 | -1.69E-46 |
| MS.gene056046 | MS.gene92218 | 0.811569 | 6.56E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene92218 | 0.868529 | 6.10E-66 | -1.69E-46 |
| MS.gene056374 | MS.gene92218 | 0.896744 | 2.75E-76 | -1.69E-46 |
| MS.gene056422 | MS.gene92218 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene92218 | 0.825419 | 4.74E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene92218 | 0.801451 | 8.95E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene92218 | 0.843101 | 1.72E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene92218 | 0.870918 | 1.01E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene92218 | 0.883164 | 5.66E-71 | -1.69E-46 |
| MS.gene056511 | MS.gene92218 | 0.823081 | 1.68E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene92218 | 0.839507 | 1.52E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene92218 | 0.803611 | 3.21E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene92218 | 0.931584 | 3.04E-94 | -1.69E-46 |
| MS.gene056692 | MS.gene92218 | 0.839347 | 1.67E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene92218 | 0.829683 | 4.49E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene92218 | 0.817704 | 2.87E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene92218 | 0.83161 | 1.51E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene92218 | 0.888454 | 5.82E-73 | -1.69E-46 |
| MS.gene057129 | MS.gene92218 | 0.896408 | 3.80E-76 | -1.69E-46 |
| MS.gene057146 | MS.gene92218 | 0.816718 | 4.79E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene92218 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene92218 | 0.892491 | 1.51E-74 | -1.69E-46 |
| MS.gene057416 | MS.gene92218 | 0.899618 | 1.66E-77 | -1.69E-46 |
| MS.gene057658 | MS.gene92218 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene92218 | 0.839716 | 1.34E-57 | -1.69E-46 |
| MS.gene057775 | MS.gene92218 | 0.804158 | 2.47E-49 | -1.69E-46 |
| MS.gene057805 | MS.gene92218 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene92218 | 0.829242 | 5.74E-55 | -1.69E-46 |
| MS.gene057857 | MS.gene92218 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene92218 | 0.856733 | 2.63E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene92218 | 0.853472 | 2.34E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene92218 | 0.830714 | 2.51E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene92218 | 0.821721 | 3.47E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene92218 | 0.838838 | 2.27E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene92218 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene92218 | 0.93075 | 1.04E-93 | -1.69E-46 |
| MS.gene058459 | MS.gene92218 | 0.809115 | 2.22E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene92218 | 0.864708 | 1.00E-64 | -1.69E-46 |
| MS.gene058723 | MS.gene92218 | 0.915769 | 3.97E-85 | -1.69E-46 |
| MS.gene058773 | MS.gene92218 | 0.901931 | 1.63E-78 | -1.69E-46 |
| MS.gene058838 | MS.gene92218 | 0.847424 | 1.17E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene92218 | 0.808766 | 2.64E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene92218 | -0.803182 | 3.94E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene92218 | 0.904886 | 7.67E-80 | -1.69E-46 |
| MS.gene059023 | MS.gene92218 | 0.868446 | 6.49E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene92218 | 0.896346 | 4.03E-76 | -1.69E-46 |
| MS.gene059079 | MS.gene92218 | 0.813055 | 3.11E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene92218 | 0.896979 | 2.19E-76 | -1.69E-46 |
| MS.gene05934 | MS.gene92218 | 0.853765 | 1.93E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene92218 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene92218 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene92218 | 0.863062 | 3.25E-64 | -1.69E-46 |
| MS.gene059667 | MS.gene92218 | 0.801111 | 1.05E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene92218 | 0.919835 | 2.74E-87 | -1.69E-46 |
| MS.gene059688 | MS.gene92218 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene92218 | 0.80012 | 1.67E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene92218 | 0.832645 | 8.40E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene92218 | 0.902359 | 1.05E-78 | -1.69E-46 |
| MS.gene059756 | MS.gene92218 | 0.849133 | 3.93E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene92218 | 0.83162 | 1.51E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene92218 | 0.884009 | 2.76E-71 | -1.69E-46 |
| MS.gene059902 | MS.gene92218 | 0.880941 | 3.62E-70 | -1.69E-46 |
| MS.gene059960 | MS.gene92218 | 0.86499 | 8.17E-65 | -1.69E-46 |
| MS.gene060193 | MS.gene92218 | 0.830911 | 2.25E-55 | -1.69E-46 |
| MS.gene060336 | MS.gene92218 | -0.80271 | 4.93E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene92218 | -0.825528 | 4.46E-54 | -1.69E-46 |
| MS.gene060341 | MS.gene92218 | 0.853503 | 2.29E-61 | -1.69E-46 |
| MS.gene060482 | MS.gene92218 | 0.867732 | 1.10E-65 | -1.69E-46 |
| MS.gene060703 | MS.gene92218 | 0.881792 | 1.79E-70 | -1.69E-46 |
| MS.gene060727 | MS.gene92218 | 0.835815 | 1.35E-56 | -1.69E-46 |
| MS.gene060728 | MS.gene92218 | 0.835941 | 1.25E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene92218 | 0.880763 | 4.20E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene92218 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene92218 | 0.847808 | 9.15E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene92218 | 0.880537 | 5.06E-70 | -1.69E-46 |
| MS.gene060818 | MS.gene92218 | 0.868018 | 8.92E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene92218 | 0.843268 | 1.56E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene92218 | 0.835125 | 2.01E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene92218 | 0.852898 | 3.41E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene92218 | 0.819815 | 9.53E-53 | -1.69E-46 |
| MS.gene060981 | MS.gene92218 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene92218 | 0.863358 | 2.64E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene92218 | 0.86136 | 1.08E-63 | -1.69E-46 |
| MS.gene061134 | MS.gene92218 | 0.8498 | 2.56E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene92218 | 0.87847 | 2.74E-69 | -1.69E-46 |
| MS.gene061171 | MS.gene92218 | 0.813203 | 2.88E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene92218 | 0.885794 | 5.98E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92218 | MS.gene074568 | PPI |
| MS.gene92216 | MS.gene92218 | PPI |
| MS.gene074248 | MS.gene92218 | PPI |
| MS.gene92220 | MS.gene92218 | PPI |
| MS.gene074249 | MS.gene92218 | PPI |
| MS.gene54468 | MS.gene92218 | PPI |
| MS.gene80971 | MS.gene92218 | PPI |
| MS.gene074247 | MS.gene92218 | PPI |
| MS.gene92218 | MS.gene92220 | PPI |
| MS.gene074568 | MS.gene92218 | PPI |
| MS.gene54465 | MS.gene92218 | PPI |
| MS.gene80966 | MS.gene92218 | PPI |
| MS.gene76905 | MS.gene92218 | PPI |
| MS.gene76908 | MS.gene92218 | PPI |
| MS.gene074567 | MS.gene92218 | PPI |
| MS.gene074566 | MS.gene92218 | PPI |
| MS.gene92217 | MS.gene92218 | PPI |
| MS.gene92218 | MS.gene074567 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92218.t1 | MTR_7g007120 | 95.322 | 171 | 8 | 0 | 11 | 181 | 11 | 181 | 6.93e-125 | 349 |
| MS.gene92218.t1 | MTR_7g007200 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 1.19e-124 | 348 |
| MS.gene92218.t1 | MTR_7g007220 | 95.322 | 171 | 8 | 0 | 11 | 181 | 11 | 181 | 1.67e-124 | 348 |
| MS.gene92218.t1 | MTR_7g007120 | 95.294 | 170 | 8 | 0 | 12 | 181 | 12 | 181 | 3.01e-124 | 347 |
| MS.gene92218.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 3.55e-124 | 347 |
| MS.gene92218.t1 | MTR_7g007230 | 93.529 | 170 | 11 | 0 | 12 | 181 | 12 | 181 | 2.20e-121 | 340 |
| MS.gene92218.t1 | MTR_6g018310 | 84.916 | 179 | 26 | 1 | 4 | 181 | 2 | 180 | 1.68e-114 | 323 |
| MS.gene92218.t1 | MTR_6g018300 | 84.358 | 179 | 24 | 2 | 4 | 181 | 2 | 177 | 9.28e-112 | 316 |
| MS.gene92218.t1 | MTR_7g007210 | 95.455 | 154 | 7 | 0 | 11 | 164 | 11 | 164 | 1.02e-110 | 313 |
| MS.gene92218.t1 | MTR_4g127870 | 50.000 | 156 | 74 | 3 | 28 | 180 | 15 | 169 | 2.65e-57 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92218.t1 | AT1G67090 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 2.64e-93 | 269 |
| MS.gene92218.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 2.73e-92 | 266 |
| MS.gene92218.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 2.73e-92 | 266 |
| MS.gene92218.t1 | AT5G38410 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 6.07e-92 | 266 |
| MS.gene92218.t1 | AT5G38420 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 1.54e-91 | 265 |
| MS.gene92218.t1 | AT5G38410 | 67.914 | 187 | 50 | 3 | 1 | 181 | 1 | 183 | 1.19e-89 | 260 |
| MS.gene92218.t1 | AT5G38410 | 67.033 | 182 | 48 | 3 | 1 | 181 | 1 | 171 | 4.38e-85 | 248 |
| MS.gene92218.t1 | AT1G67090 | 65.217 | 115 | 35 | 2 | 1 | 114 | 1 | 111 | 1.47e-45 | 147 |
Find 54 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.266546 | 7.1:-87118800 | MS.gene92218:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.1:+87118787 | None:intergenic |
| TCTTTGTTGATCTTTGTAAC+TGG | 0.311725 | 7.1:+87119156 | None:intergenic |
| GGCGCGGTGGCTCCATTTGT+TGG | 0.347642 | 7.1:-87119201 | MS.gene92218:CDS |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.1:-87118778 | MS.gene92218:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.1:-87118582 | MS.gene92218:CDS |
| TTCTTTCGCCAATTGTTCTC+TGG | 0.378466 | 7.1:+87118818 | None:intergenic |
| TCTTCCACCATTGCTTGTAA+TGG | 0.401668 | 7.1:+87119125 | None:intergenic |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.405140 | 7.1:+87118825 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.409622 | 7.1:-87118826 | MS.gene92218:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.1:-87118556 | MS.gene92218:CDS |
| CGATGCTTCTCAAGTGTTGA+AGG | 0.414382 | 7.1:-87118527 | MS.gene92218:CDS |
| ATATAGGTGTGGCCTCCTAT+TGG | 0.416991 | 7.1:-87118882 | MS.gene92218:intron |
| GTTGGACTCAAGTCCATGGC+TGG | 0.431505 | 7.1:-87119183 | MS.gene92218:CDS |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.1:-87119232 | MS.gene92218:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435101 | 7.1:+87118867 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.1:+87118478 | None:intergenic |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.1:-87118475 | MS.gene92218:CDS |
| CTTTGTTGATCTTTGTAACT+GGG | 0.495423 | 7.1:+87119157 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.1:-87118791 | MS.gene92218:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.1:+87118870 | None:intergenic |
| ATTTGTTGGACTCAAGTCCA+TGG | 0.520007 | 7.1:-87119187 | MS.gene92218:CDS |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.1:-87118796 | MS.gene92218:CDS |
| CGTGCCTCTTCGGTACAATC+CGG | 0.524408 | 7.1:-87119222 | MS.gene92218:CDS |
| ATGGACTTGAGTCCAACAAA+TGG | 0.526746 | 7.1:+87119189 | None:intergenic |
| TCCACCATTGCTTGTAATGG+AGG | 0.530318 | 7.1:+87119128 | None:intergenic |
| AGCTGAAGAGGAAATTATAG+AGG | 0.539718 | 7.1:+87119260 | None:intergenic |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.1:+87118596 | None:intergenic |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.1:-87118604 | MS.gene92218:CDS |
| CTTCAACACTTGAGAAGCAT+CGG | 0.552465 | 7.1:+87118528 | None:intergenic |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.1:-87118790 | MS.gene92218:CDS |
| AACAAATGGAGCCACCGCGC+CGG | 0.560979 | 7.1:+87119203 | None:intergenic |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.1:-87118795 | MS.gene92218:CDS |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.1:+87118586 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.1:-87118592 | MS.gene92218:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.1:+87118464 | None:intergenic |
| ACTCAAACTTAGTAAACTGC+AGG | 0.582384 | 7.1:+87118403 | None:intergenic |
| AACTGTAGTCACAGCTGAAG+AGG | 0.589798 | 7.1:+87119248 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.1:+87118605 | None:intergenic |
| GCATCGGTTGCTCCAAACAA+AGG | 0.600691 | 7.1:+87118544 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.600961 | 7.1:+87118828 | None:intergenic |
| ATTACCTCCATTACAAGCAA+TGG | 0.604904 | 7.1:-87119132 | MS.gene92218:CDS |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.1:-87118763 | MS.gene92218:intron |
| ACCTCCATTACAAGCAATGG+TGG | 0.613355 | 7.1:-87119129 | MS.gene92218:CDS |
| TTCGGTACAATCCGGCGCGG+TGG | 0.614407 | 7.1:-87119214 | MS.gene92218:CDS |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.1:+87119170 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.1:+87118832 | None:intergenic |
| CGGATTGTACCGAAGAGGCA+CGG | 0.641462 | 7.1:+87119223 | None:intergenic |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.1:-87119109 | MS.gene92218:intron |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.1:+87118479 | None:intergenic |
| CGCGCCGGATTGTACCGAAG+AGG | 0.661856 | 7.1:+87119218 | None:intergenic |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.1:+87118471 | None:intergenic |
| CTCTTCGGTACAATCCGGCG+CGG | 0.696951 | 7.1:-87119217 | MS.gene92218:CDS |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.1:-87118573 | MS.gene92218:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACATTAATAGAGTCAT+TGG | - | chr7.1:87118722-87118741 | MS.gene92218:intron | 20.0% |
| !! | AATGTACAAAAGATTAAGTT+AGG | + | chr7.1:87118770-87118789 | None:intergenic | 20.0% |
| !! | ATAATGTACAAAGTTTGAAT+TGG | + | chr7.1:87118641-87118660 | None:intergenic | 20.0% |
| !! | ATGTACAAAAGATTAAGTTA+GGG | + | chr7.1:87118769-87118788 | None:intergenic | 20.0% |
| !! | ATTCAAACTTTGTACATTAT+TGG | - | chr7.1:87118641-87118660 | MS.gene92218:intron | 20.0% |
| !! | TTTGTACATTACTACTATAT+AGG | - | chr7.1:87118780-87118799 | MS.gene92218:CDS | 20.0% |
| !!! | GATTTCATGTTTTTTACATA+AGG | - | chr7.1:87118686-87118705 | MS.gene92218:intron | 20.0% |
| ! | TGTACAAAAGATTAAGTTAG+GGG | + | chr7.1:87118768-87118787 | None:intergenic | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.1:87118878-87118897 | MS.gene92218:CDS | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.1:87119026-87119045 | MS.gene92218:intron | 25.0% |
| ACATTACTACTATATAGGTG+TGG | - | chr7.1:87118785-87118804 | MS.gene92218:CDS | 30.0% | |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.1:87118882-87118901 | MS.gene92218:intron | 30.0% | |
| CTTTGTTGATCTTTGTAACT+GGG | + | chr7.1:87118524-87118543 | None:intergenic | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.1:87118883-87118902 | MS.gene92218:intron | 30.0% | |
| TCTTTGTTGATCTTTGTAAC+TGG | + | chr7.1:87118525-87118544 | None:intergenic | 30.0% | |
| TTGCAAGTAATATTAGACCT+CGG | + | chr7.1:87118935-87118954 | None:intergenic | 30.0% | |
| ! | GGGCTTAATAAAATTTTGCA+TGG | + | chr7.1:87118748-87118767 | None:intergenic | 30.0% |
| !! | ATATAATCGTTGTTTTGTCG+CGG | - | chr7.1:87118969-87118988 | MS.gene92218:intron | 30.0% |
| AGCTGAAGAGGAAATTATAG+AGG | + | chr7.1:87118421-87118440 | None:intergenic | 35.0% | |
| ATTACCTCCATTACAAGCAA+TGG | - | chr7.1:87118546-87118565 | MS.gene92218:CDS | 35.0% | |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.1:87118887-87118906 | MS.gene92218:intron | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.1:87118814-87118833 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.1:87118888-87118907 | MS.gene92218:intron | 35.0% | |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.1:87118811-87118830 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.1:87119086-87119105 | MS.gene92218:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.1:87118853-87118872 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.1:87118852-87118871 | MS.gene92218:CDS | 40.0% | |
| ATGGACTTGAGTCCAACAAA+TGG | + | chr7.1:87118492-87118511 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.1:87119122-87119141 | MS.gene92218:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.1:87118995-87119014 | None:intergenic | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.1:87119041-87119060 | MS.gene92218:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.1:87119095-87119114 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.1:87118556-87118575 | None:intergenic | 40.0% | |
| TTCTTTCGCCAATTGTTCTC+TGG | + | chr7.1:87118863-87118882 | None:intergenic | 40.0% | |
| ! | ATTTGTTGGACTCAAGTCCA+TGG | - | chr7.1:87118491-87118510 | MS.gene92218:CDS | 40.0% |
| ! | CTTCAACACTTGAGAAGCAT+CGG | + | chr7.1:87119153-87119172 | None:intergenic | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.1:87119096-87119115 | MS.gene92218:intron | 40.0% |
| AACTGTAGTCACAGCTGAAG+AGG | + | chr7.1:87118433-87118452 | None:intergenic | 45.0% | |
| ACCTCCATTACAAGCAATGG+TGG | - | chr7.1:87118549-87118568 | MS.gene92218:CDS | 45.0% | |
| ATATAGGTGTGGCCTCCTAT+TGG | - | chr7.1:87118796-87118815 | MS.gene92218:CDS | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.1:87119105-87119124 | MS.gene92218:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.1:87118894-87118913 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.1:87119085-87119104 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.1:87119217-87119236 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.1:87119210-87119229 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.1:87119203-87119222 | MS.gene92218:CDS | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.1:87118856-87118875 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.1:87118446-87118465 | MS.gene92218:CDS | 45.0% | |
| TCCACCATTGCTTGTAATGG+AGG | + | chr7.1:87118553-87118572 | None:intergenic | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.1:87118569-87118588 | MS.gene92218:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.1:87118915-87118934 | MS.gene92218:intron | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.1:87119203-87119222 | None:intergenic | 45.0% |
| !! | CGATGCTTCTCAAGTGTTGA+AGG | - | chr7.1:87119151-87119170 | MS.gene92218:CDS | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.1:87119202-87119221 | None:intergenic | 45.0% |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.1:87119076-87119095 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.1:87118849-87118868 | None:intergenic | 50.0% |
| !! | GCATCGGTTGCTCCAAACAA+AGG | + | chr7.1:87119137-87119156 | None:intergenic | 50.0% |
| CGGATTGTACCGAAGAGGCA+CGG | + | chr7.1:87118458-87118477 | None:intergenic | 55.0% | |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.1:87119074-87119093 | MS.gene92218:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+CGG | - | chr7.1:87118456-87118475 | MS.gene92218:CDS | 55.0% | |
| GTTGGACTCAAGTCCATGGC+TGG | - | chr7.1:87118495-87118514 | MS.gene92218:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.1:87118511-87118530 | None:intergenic | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.1:87118900-87118919 | MS.gene92218:intron | 55.0% |
| !! | TCGTTGTTTTGTCGCGGCCA+AGG | - | chr7.1:87118975-87118994 | MS.gene92218:intron | 55.0% |
| AACAAATGGAGCCACCGCGC+CGG | + | chr7.1:87118478-87118497 | None:intergenic | 60.0% | |
| CTCTTCGGTACAATCCGGCG+CGG | - | chr7.1:87118461-87118480 | MS.gene92218:CDS | 60.0% | |
| CGCGCCGGATTGTACCGAAG+AGG | + | chr7.1:87118463-87118482 | None:intergenic | 65.0% | |
| GGCGCGGTGGCTCCATTTGT+TGG | - | chr7.1:87118477-87118496 | MS.gene92218:CDS | 65.0% | |
| TTCGGTACAATCCGGCGCGG+TGG | - | chr7.1:87118464-87118483 | MS.gene92218:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87118411 | 87119289 | 87118411 | ID=MS.gene92218 |
| chr7.1 | mRNA | 87118411 | 87119289 | 87118411 | ID=MS.gene92218.t1;Parent=MS.gene92218 |
| chr7.1 | exon | 87119110 | 87119289 | 87119110 | ID=MS.gene92218.t1.exon1;Parent=MS.gene92218.t1 |
| chr7.1 | CDS | 87119110 | 87119289 | 87119110 | ID=cds.MS.gene92218.t1;Parent=MS.gene92218.t1 |
| chr7.1 | exon | 87118764 | 87118898 | 87118764 | ID=MS.gene92218.t1.exon2;Parent=MS.gene92218.t1 |
| chr7.1 | CDS | 87118764 | 87118898 | 87118764 | ID=cds.MS.gene92218.t1;Parent=MS.gene92218.t1 |
| chr7.1 | exon | 87118411 | 87118641 | 87118411 | ID=MS.gene92218.t1.exon3;Parent=MS.gene92218.t1 |
| chr7.1 | CDS | 87118411 | 87118641 | 87118411 | ID=cds.MS.gene92218.t1;Parent=MS.gene92218.t1 |
| Gene Sequence |
| Protein sequence |
