Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54465.t1 | XP_013447451.1 | 95 | 181 | 9 | 0 | 1 | 181 | 1 | 181 | 4.90E-95 | 357.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54465.t1 | P07689 | 84.9 | 179 | 27 | 0 | 3 | 181 | 2 | 180 | 1.6e-86 | 320.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54465.t1 | A0A072U6Q1 | 95.0 | 181 | 9 | 0 | 1 | 181 | 1 | 181 | 3.6e-95 | 357.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene54465 | 0.816345 | 5.80E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene54465 | 0.914845 | 1.19E-84 | -1.69E-46 |
| MS.gene049173 | MS.gene54465 | 0.885639 | 6.84E-72 | -1.69E-46 |
| MS.gene049217 | MS.gene54465 | 0.899554 | 1.77E-77 | -1.69E-46 |
| MS.gene049222 | MS.gene54465 | 0.89403 | 3.62E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene54465 | 0.836843 | 7.38E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene54465 | 0.939178 | 1.96E-99 | -1.69E-46 |
| MS.gene049320 | MS.gene54465 | 0.928483 | 2.71E-92 | -1.69E-46 |
| MS.gene04939 | MS.gene54465 | 0.843807 | 1.12E-58 | -1.69E-46 |
| MS.gene049425 | MS.gene54465 | -0.802785 | 4.76E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene54465 | 0.837927 | 3.89E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene54465 | 0.882042 | 1.45E-70 | -1.69E-46 |
| MS.gene049627 | MS.gene54465 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene54465 | 0.896497 | 3.49E-76 | -1.69E-46 |
| MS.gene049805 | MS.gene54465 | 0.871137 | 8.59E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene54465 | 0.863252 | 2.84E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene54465 | 0.91144 | 6.07E-83 | -1.69E-46 |
| MS.gene050165 | MS.gene54465 | 0.903918 | 2.11E-79 | -1.69E-46 |
| MS.gene050170 | MS.gene54465 | 0.809344 | 1.98E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene54465 | 0.848622 | 5.45E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene54465 | 0.894332 | 2.72E-75 | -1.69E-46 |
| MS.gene050432 | MS.gene54465 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene54465 | 0.851704 | 7.46E-61 | -1.69E-46 |
| MS.gene050475 | MS.gene54465 | -0.816035 | 6.80E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene54465 | 0.823324 | 1.47E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene54465 | 0.906373 | 1.59E-80 | -1.69E-46 |
| MS.gene050518 | MS.gene54465 | 0.910645 | 1.48E-82 | -1.69E-46 |
| MS.gene050538 | MS.gene54465 | 0.829623 | 4.64E-55 | -1.69E-46 |
| MS.gene050541 | MS.gene54465 | -0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene54465 | 0.866126 | 3.58E-65 | -1.69E-46 |
| MS.gene050593 | MS.gene54465 | 0.850607 | 1.52E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene54465 | 0.920715 | 9.01E-88 | -1.69E-46 |
| MS.gene050662 | MS.gene54465 | 0.833875 | 4.15E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene54465 | 0.891322 | 4.41E-74 | -1.69E-46 |
| MS.gene050686 | MS.gene54465 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene54465 | 0.920405 | 1.33E-87 | -1.69E-46 |
| MS.gene050747 | MS.gene54465 | 0.861297 | 1.13E-63 | -1.69E-46 |
| MS.gene050767 | MS.gene54465 | 0.830283 | 3.20E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene54465 | 0.833468 | 5.24E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene54465 | 0.919219 | 5.92E-87 | -1.69E-46 |
| MS.gene05080 | MS.gene54465 | 0.877327 | 6.87E-69 | -1.69E-46 |
| MS.gene05081 | MS.gene54465 | 0.81563 | 8.38E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene54465 | 0.851604 | 7.97E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene54465 | 0.849336 | 3.45E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene54465 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene54465 | 0.864191 | 1.45E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene54465 | 0.896029 | 5.46E-76 | -1.69E-46 |
| MS.gene05100 | MS.gene54465 | 0.878003 | 3.99E-69 | -1.69E-46 |
| MS.gene05105 | MS.gene54465 | 0.807681 | 4.49E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene54465 | 0.882099 | 1.38E-70 | -1.69E-46 |
| MS.gene051317 | MS.gene54465 | 0.864262 | 1.38E-64 | -1.69E-46 |
| MS.gene051434 | MS.gene54465 | 0.839566 | 1.47E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene54465 | 0.88258 | 9.25E-71 | -1.69E-46 |
| MS.gene051617 | MS.gene54465 | 0.830677 | 2.57E-55 | -1.69E-46 |
| MS.gene051651 | MS.gene54465 | -0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene54465 | 0.85575 | 5.12E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene54465 | 0.807672 | 4.51E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene54465 | 0.817468 | 3.25E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene54465 | 0.930796 | 9.70E-94 | -1.69E-46 |
| MS.gene051838 | MS.gene54465 | 0.81924 | 1.29E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene54465 | 0.875819 | 2.28E-68 | -1.69E-46 |
| MS.gene051949 | MS.gene54465 | 0.868691 | 5.41E-66 | -1.69E-46 |
| MS.gene052164 | MS.gene54465 | 0.836472 | 9.17E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene54465 | 0.911393 | 6.40E-83 | -1.69E-46 |
| MS.gene052290 | MS.gene54465 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene54465 | 0.89846 | 5.19E-77 | -1.69E-46 |
| MS.gene052482 | MS.gene54465 | 0.830982 | 2.16E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene54465 | 0.836822 | 7.47E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene54465 | 0.836654 | 8.24E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene54465 | 0.847776 | 9.34E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene54465 | 0.836327 | 9.99E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene54465 | 0.903943 | 2.06E-79 | -1.69E-46 |
| MS.gene052822 | MS.gene54465 | 0.847312 | 1.25E-59 | -1.69E-46 |
| MS.gene052823 | MS.gene54465 | 0.833566 | 4.96E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene54465 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene54465 | 0.873635 | 1.26E-67 | -1.69E-46 |
| MS.gene052872 | MS.gene54465 | 0.884078 | 2.61E-71 | -1.69E-46 |
| MS.gene052916 | MS.gene54465 | 0.865566 | 5.38E-65 | -1.69E-46 |
| MS.gene052966 | MS.gene54465 | 0.838797 | 2.32E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene54465 | 0.856931 | 2.30E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene54465 | 0.821828 | 3.28E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene54465 | 0.871781 | 5.26E-67 | -1.69E-46 |
| MS.gene053203 | MS.gene54465 | 0.847294 | 1.27E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene54465 | 0.872141 | 3.99E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene54465 | 0.916414 | 1.83E-85 | -1.69E-46 |
| MS.gene053286 | MS.gene54465 | 0.912373 | 2.10E-83 | -1.69E-46 |
| MS.gene053322 | MS.gene54465 | 0.876454 | 1.38E-68 | -1.69E-46 |
| MS.gene053384 | MS.gene54465 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene54465 | 0.817292 | 3.56E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene54465 | 0.825287 | 5.09E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene54465 | 0.837533 | 4.91E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene54465 | -0.829839 | 4.11E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene54465 | 0.871902 | 4.80E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene54465 | 0.900379 | 7.77E-78 | -1.69E-46 |
| MS.gene053824 | MS.gene54465 | 0.869147 | 3.85E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene54465 | 0.860825 | 1.58E-63 | -1.69E-46 |
| MS.gene054374 | MS.gene54465 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene54465 | 0.805266 | 1.45E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene54465 | 0.845229 | 4.63E-59 | -1.69E-46 |
| MS.gene054543 | MS.gene54465 | 0.811346 | 7.33E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene54465 | 0.852247 | 5.23E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene54465 | 0.890091 | 1.35E-73 | -1.69E-46 |
| MS.gene054642 | MS.gene54465 | 0.942986 | 2.71E-102 | -1.69E-46 |
| MS.gene05470 | MS.gene54465 | 0.847995 | 8.12E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene54465 | 0.803805 | 2.93E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene54465 | 0.919389 | 4.79E-87 | -1.69E-46 |
| MS.gene05505 | MS.gene54465 | 0.841573 | 4.38E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene54465 | -0.822192 | 2.70E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene54465 | 0.898218 | 6.58E-77 | -1.69E-46 |
| MS.gene055212 | MS.gene54465 | 0.845454 | 4.02E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene54465 | 0.824438 | 8.07E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene54465 | 0.837931 | 3.88E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene54465 | 0.914982 | 1.01E-84 | -1.69E-46 |
| MS.gene055397 | MS.gene54465 | 0.867748 | 1.09E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene54465 | 0.848081 | 7.69E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene54465 | 0.918315 | 1.81E-86 | -1.69E-46 |
| MS.gene055577 | MS.gene54465 | 0.877256 | 7.27E-69 | -1.69E-46 |
| MS.gene055634 | MS.gene54465 | 0.818456 | 1.94E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene54465 | 0.867066 | 1.80E-65 | -1.69E-46 |
| MS.gene055638 | MS.gene54465 | 0.866276 | 3.21E-65 | -1.69E-46 |
| MS.gene055647 | MS.gene54465 | 0.882168 | 1.31E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene54465 | 0.901497 | 2.52E-78 | -1.69E-46 |
| MS.gene055748 | MS.gene54465 | 0.865346 | 6.31E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene54465 | 0.848657 | 5.33E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene54465 | 0.864388 | 1.26E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene54465 | 0.856822 | 2.48E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene54465 | 0.841424 | 4.79E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene54465 | 0.880611 | 4.76E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene54465 | 0.875746 | 2.42E-68 | -1.69E-46 |
| MS.gene055942 | MS.gene54465 | -0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene055956 | MS.gene54465 | -0.878245 | 3.28E-69 | -1.69E-46 |
| MS.gene056083 | MS.gene54465 | 0.864925 | 8.56E-65 | -1.69E-46 |
| MS.gene056374 | MS.gene54465 | 0.905537 | 3.87E-80 | -1.69E-46 |
| MS.gene056446 | MS.gene54465 | 0.810992 | 8.75E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene54465 | 0.814326 | 1.63E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene54465 | 0.872572 | 2.87E-67 | -1.69E-46 |
| MS.gene056510 | MS.gene54465 | 0.905148 | 5.83E-80 | -1.69E-46 |
| MS.gene056549 | MS.gene54465 | 0.838888 | 2.20E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene54465 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene54465 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene54465 | 0.935705 | 5.56E-97 | -1.69E-46 |
| MS.gene056692 | MS.gene54465 | 0.848637 | 5.40E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene54465 | 0.842747 | 2.14E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene54465 | 0.832907 | 7.23E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene54465 | 0.826748 | 2.29E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene54465 | 0.830614 | 2.66E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene54465 | 0.875084 | 4.07E-68 | -1.69E-46 |
| MS.gene057129 | MS.gene54465 | 0.896103 | 5.08E-76 | -1.69E-46 |
| MS.gene057146 | MS.gene54465 | 0.819605 | 1.06E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene54465 | 0.82507 | 5.73E-54 | -1.69E-46 |
| MS.gene057246 | MS.gene54465 | 0.826246 | 3.01E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene54465 | 0.881402 | 2.47E-70 | -1.69E-46 |
| MS.gene057332 | MS.gene54465 | 0.822996 | 1.76E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene54465 | 0.901967 | 1.57E-78 | -1.69E-46 |
| MS.gene057658 | MS.gene54465 | 0.836279 | 1.03E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene54465 | 0.861908 | 7.37E-64 | -1.69E-46 |
| MS.gene057857 | MS.gene54465 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene54465 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene54465 | 0.846534 | 2.05E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene54465 | 0.847042 | 1.49E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene54465 | 0.828686 | 7.83E-55 | -1.69E-46 |
| MS.gene058334 | MS.gene54465 | -0.816908 | 4.34E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene54465 | 0.856341 | 3.44E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene54465 | 0.84844 | 6.12E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene54465 | 0.943253 | 1.68E-102 | -1.69E-46 |
| MS.gene058544 | MS.gene54465 | 0.894349 | 2.68E-75 | -1.69E-46 |
| MS.gene058723 | MS.gene54465 | 0.89658 | 3.22E-76 | -1.69E-46 |
| MS.gene058773 | MS.gene54465 | 0.895933 | 5.98E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene54465 | 0.858426 | 8.31E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene54465 | 0.833222 | 6.04E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene54465 | 0.915571 | 5.02E-85 | -1.69E-46 |
| MS.gene059023 | MS.gene54465 | 0.890278 | 1.14E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene54465 | 0.910783 | 1.27E-82 | -1.69E-46 |
| MS.gene059079 | MS.gene54465 | 0.829737 | 4.35E-55 | -1.69E-46 |
| MS.gene05912 | MS.gene54465 | 0.810628 | 1.05E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene54465 | 0.858612 | 7.31E-63 | -1.69E-46 |
| MS.gene05914 | MS.gene54465 | 0.829166 | 5.99E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene54465 | 0.86696 | 1.95E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene54465 | 0.845432 | 4.08E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene54465 | 0.934266 | 5.27E-96 | -1.69E-46 |
| MS.gene059699 | MS.gene54465 | -0.806333 | 8.66E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene54465 | -0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene54465 | 0.90613 | 2.06E-80 | -1.69E-46 |
| MS.gene059756 | MS.gene54465 | 0.887423 | 1.45E-72 | -1.69E-46 |
| MS.gene059801 | MS.gene54465 | 0.821035 | 5.00E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene54465 | 0.832859 | 7.43E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene54465 | 0.889381 | 2.55E-73 | -1.69E-46 |
| MS.gene059902 | MS.gene54465 | 0.870738 | 1.16E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene54465 | 0.868525 | 6.12E-66 | -1.69E-46 |
| MS.gene060193 | MS.gene54465 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene060336 | MS.gene54465 | -0.810201 | 1.30E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene54465 | -0.82766 | 1.38E-54 | -1.69E-46 |
| MS.gene060341 | MS.gene54465 | 0.850001 | 2.25E-60 | -1.69E-46 |
| MS.gene060482 | MS.gene54465 | 0.82495 | 6.12E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene54465 | 0.890082 | 1.36E-73 | -1.69E-46 |
| MS.gene060727 | MS.gene54465 | 0.836187 | 1.08E-56 | -1.69E-46 |
| MS.gene060728 | MS.gene54465 | 0.860073 | 2.66E-63 | -1.69E-46 |
| MS.gene060762 | MS.gene54465 | 0.888012 | 8.61E-73 | -1.69E-46 |
| MS.gene060778 | MS.gene54465 | 0.802976 | 4.34E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene54465 | 0.873589 | 1.31E-67 | -1.69E-46 |
| MS.gene060804 | MS.gene54465 | 0.861363 | 1.08E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene54465 | 0.85428 | 1.37E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene54465 | 0.837746 | 4.33E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene54465 | 0.87569 | 2.53E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene54465 | 0.870197 | 1.75E-66 | -1.69E-46 |
| MS.gene061041 | MS.gene54465 | 0.826726 | 2.32E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene54465 | 0.83662 | 8.41E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene54465 | 0.903506 | 3.23E-79 | -1.69E-46 |
| MS.gene061200 | MS.gene54465 | 0.873652 | 1.25E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54465 | MS.gene80971 | PPI |
| MS.gene54465 | MS.gene074566 | PPI |
| MS.gene54465 | MS.gene92220 | PPI |
| MS.gene54465 | MS.gene074249 | PPI |
| MS.gene54465 | MS.gene074247 | PPI |
| MS.gene54465 | MS.gene92217 | PPI |
| MS.gene54465 | MS.gene76905 | PPI |
| MS.gene54465 | MS.gene92216 | PPI |
| MS.gene80966 | MS.gene54465 | PPI |
| MS.gene54465 | MS.gene074248 | PPI |
| MS.gene54465 | MS.gene92218 | PPI |
| MS.gene54465 | MS.gene54468 | PPI |
| MS.gene54465 | MS.gene074567 | PPI |
| MS.gene54465 | MS.gene76908 | PPI |
| MS.gene54465 | MS.gene074568 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54465.t1 | MTR_7g007120 | 95.322 | 171 | 8 | 0 | 11 | 181 | 11 | 181 | 6.21e-125 | 349 |
| MS.gene54465.t1 | MTR_7g007200 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 1.14e-124 | 348 |
| MS.gene54465.t1 | MTR_7g007220 | 95.322 | 171 | 8 | 0 | 11 | 181 | 11 | 181 | 1.16e-124 | 348 |
| MS.gene54465.t1 | MTR_7g007120 | 95.294 | 170 | 8 | 0 | 12 | 181 | 12 | 181 | 2.50e-124 | 348 |
| MS.gene54465.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 3.22e-124 | 347 |
| MS.gene54465.t1 | MTR_7g007230 | 93.529 | 170 | 11 | 0 | 12 | 181 | 12 | 181 | 1.85e-121 | 340 |
| MS.gene54465.t1 | MTR_6g018310 | 84.358 | 179 | 27 | 1 | 4 | 181 | 2 | 180 | 3.79e-114 | 322 |
| MS.gene54465.t1 | MTR_6g018300 | 83.799 | 179 | 25 | 2 | 4 | 181 | 2 | 177 | 2.57e-111 | 315 |
| MS.gene54465.t1 | MTR_7g007210 | 95.455 | 154 | 7 | 0 | 11 | 164 | 11 | 164 | 8.47e-111 | 314 |
| MS.gene54465.t1 | MTR_4g127870 | 50.000 | 156 | 74 | 3 | 28 | 180 | 15 | 169 | 2.65e-57 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54465.t1 | AT1G67090 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 2.61e-93 | 269 |
| MS.gene54465.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 2.53e-92 | 267 |
| MS.gene54465.t1 | AT5G38430 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 2.53e-92 | 267 |
| MS.gene54465.t1 | AT5G38410 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 5.27e-92 | 266 |
| MS.gene54465.t1 | AT5G38420 | 69.780 | 182 | 50 | 2 | 1 | 181 | 1 | 178 | 1.58e-91 | 265 |
| MS.gene54465.t1 | AT5G38410 | 67.914 | 187 | 50 | 3 | 1 | 181 | 1 | 183 | 1.02e-89 | 260 |
| MS.gene54465.t1 | AT5G38410 | 67.033 | 182 | 48 | 3 | 1 | 181 | 1 | 171 | 4.33e-85 | 248 |
| MS.gene54465.t1 | AT1G67090 | 65.217 | 115 | 35 | 2 | 1 | 114 | 1 | 111 | 1.64e-45 | 147 |
Find 50 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.244592 | 7.4:-92304964 | MS.gene54465:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.4:+92304951 | None:intergenic |
| TCTTTGTTGATCTTTGTAAC+TGG | 0.311725 | 7.4:+92305266 | None:intergenic |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.4:-92304942 | MS.gene54465:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.4:-92304741 | MS.gene54465:CDS |
| ACCATTGACCAGAGAACAAT+TGG | 0.397843 | 7.4:-92304990 | MS.gene54465:CDS |
| TGATGCTTCTCAAGTGTTGA+AGG | 0.410018 | 7.4:-92304686 | MS.gene54465:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.4:-92304715 | MS.gene54465:CDS |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.416317 | 7.4:+92304989 | None:intergenic |
| TCTTCCACCATTGCTTGTAA+TGG | 0.422658 | 7.4:+92305235 | None:intergenic |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.4:-92305342 | MS.gene54465:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435806 | 7.4:+92305031 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.4:+92304637 | None:intergenic |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.4:-92304634 | MS.gene54465:CDS |
| GGTGCGGTGGCTCCATTCGT+TGG | 0.494503 | 7.4:-92305311 | MS.gene54465:CDS |
| CTTTGTTGATCTTTGTAACT+GGG | 0.495423 | 7.4:+92305267 | None:intergenic |
| CTCAAAATTTAGTAGACTGC+AGG | 0.495678 | 7.4:+92304562 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.4:-92304955 | MS.gene54465:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.4:+92305034 | None:intergenic |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.4:-92304960 | MS.gene54465:CDS |
| ATTACTTCCATTACAAGCAA+TGG | 0.539617 | 7.4:-92305242 | MS.gene54465:CDS |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.4:+92304755 | None:intergenic |
| CGTGCCTCTTCGGTACAATC+CGG | 0.544084 | 7.4:-92305332 | MS.gene54465:CDS |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.4:-92304763 | MS.gene54465:CDS |
| GTTGGACTAAAGTCCATGGC+TGG | 0.555609 | 7.4:-92305293 | MS.gene54465:CDS |
| AACGAATGGAGCCACCGCAC+CGG | 0.556419 | 7.4:+92305313 | None:intergenic |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.4:-92304954 | MS.gene54465:CDS |
| AGCTGAAGAGGACATGATAG+AGG | 0.561007 | 7.4:+92305370 | None:intergenic |
| TTCGGTACAATCCGGTGCGG+TGG | 0.565195 | 7.4:-92305324 | MS.gene54465:CDS |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.4:-92304959 | MS.gene54465:CDS |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.4:+92304745 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.4:-92304751 | MS.gene54465:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.4:+92304623 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.4:+92304764 | None:intergenic |
| AACTGTAGTCACAGCTGAAG+AGG | 0.597051 | 7.4:+92305358 | None:intergenic |
| GCATCAGTTGCTCCAAACAA+AGG | 0.598394 | 7.4:+92304703 | None:intergenic |
| ATTCGTTGGACTAAAGTCCA+TGG | 0.609669 | 7.4:-92305297 | MS.gene54465:CDS |
| ACTTCCATTACAAGCAATGG+TGG | 0.610706 | 7.4:-92305239 | MS.gene54465:CDS |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.4:-92304927 | MS.gene54465:intron |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.4:+92305280 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.4:+92304996 | None:intergenic |
| ATGGACTTTAGTCCAACGAA+TGG | 0.623442 | 7.4:+92305299 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.637841 | 7.4:+92304992 | None:intergenic |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.4:-92305219 | MS.gene54465:intron |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.4:+92304638 | None:intergenic |
| CGGATTGTACCGAAGAGGCA+CGG | 0.664722 | 7.4:+92305333 | None:intergenic |
| CGCACCGGATTGTACCGAAG+AGG | 0.667423 | 7.4:+92305328 | None:intergenic |
| CTCTTCGGTACAATCCGGTG+CGG | 0.678435 | 7.4:-92305327 | MS.gene54465:CDS |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.4:+92304630 | None:intergenic |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.4:-92304732 | MS.gene54465:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGTAAAGTAATATTAGACCT+CGG | + | chr7.4:92305040-92305059 | None:intergenic | 25.0% |
| ! | ATAAGCACTTATAGATTCAT+TGG | - | chr7.4:92304843-92304862 | MS.gene54465:intron | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.4:92304983-92305002 | MS.gene54465:CDS | 25.0% |
| !! | TATATTTTCATAAGCTCTTC+AGG | - | chr7.4:92304792-92304811 | MS.gene54465:intron | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.4:92305136-92305155 | MS.gene54465:intron | 25.0% |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.4:92304987-92305006 | MS.gene54465:CDS | 30.0% | |
| ATTACTTCCATTACAAGCAA+TGG | - | chr7.4:92304705-92304724 | MS.gene54465:CDS | 30.0% | |
| CTTTGTTGATCTTTGTAACT+GGG | + | chr7.4:92304683-92304702 | None:intergenic | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.4:92304988-92305007 | MS.gene54465:CDS | 30.0% | |
| TCTTTGTTGATCTTTGTAAC+TGG | + | chr7.4:92304684-92304703 | None:intergenic | 30.0% | |
| !!! | ACAAGTTTGTTAACCCTTTT+GGG | - | chr7.4:92304875-92304894 | MS.gene54465:intron | 30.0% |
| ACACCTAAAATTGCCCAAAA+GGG | + | chr7.4:92304891-92304910 | None:intergenic | 35.0% | |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.4:92304992-92305011 | MS.gene54465:CDS | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.4:92304919-92304938 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.4:92304993-92305012 | MS.gene54465:CDS | 35.0% | |
| ! | TAACCCTTTTGGGCAATTTT+AGG | - | chr7.4:92304885-92304904 | MS.gene54465:intron | 35.0% |
| ! | TTCTTTTGCCAATTGTTCTC+TGG | + | chr7.4:92304968-92304987 | None:intergenic | 35.0% |
| !!! | CACAAGTTTGTTAACCCTTT+TGG | - | chr7.4:92304874-92304893 | MS.gene54465:intron | 35.0% |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.4:92304916-92304935 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.4:92305196-92305215 | MS.gene54465:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.4:92304958-92304977 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.4:92304957-92304976 | MS.gene54465:CDS | 40.0% | |
| ACTTCCATTACAAGCAATGG+TGG | - | chr7.4:92304708-92304727 | MS.gene54465:CDS | 40.0% | |
| ATGGACTTTAGTCCAACGAA+TGG | + | chr7.4:92304651-92304670 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.4:92305232-92305251 | MS.gene54465:CDS | 40.0% | |
| ATTCGTTGGACTAAAGTCCA+TGG | - | chr7.4:92304650-92304669 | MS.gene54465:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.4:92305105-92305124 | None:intergenic | 40.0% | |
| CACACCTAAAATTGCCCAAA+AGG | + | chr7.4:92304892-92304911 | None:intergenic | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.4:92305151-92305170 | MS.gene54465:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.4:92305205-92305224 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.4:92304715-92304734 | None:intergenic | 40.0% | |
| !! | CTTTTGGGCAATTTTAGGTG+TGG | - | chr7.4:92304890-92304909 | MS.gene54465:intron | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.4:92305206-92305225 | MS.gene54465:intron | 40.0% |
| !! | TGATGCTTCTCAAGTGTTGA+AGG | - | chr7.4:92305261-92305280 | MS.gene54465:CDS | 40.0% |
| AACTGTAGTCACAGCTGAAG+AGG | + | chr7.4:92304592-92304611 | None:intergenic | 45.0% | |
| AGCTGAAGAGGACATGATAG+AGG | + | chr7.4:92304580-92304599 | None:intergenic | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.4:92305215-92305234 | MS.gene54465:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.4:92304999-92305018 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.4:92305195-92305214 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.4:92305327-92305346 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.4:92305320-92305339 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.4:92305313-92305332 | MS.gene54465:CDS | 45.0% | |
| GCATCAGTTGCTCCAAACAA+AGG | + | chr7.4:92305247-92305266 | None:intergenic | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.4:92304961-92304980 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.4:92304605-92304624 | MS.gene54465:CDS | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.4:92304728-92304747 | MS.gene54465:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.4:92305020-92305039 | MS.gene54465:CDS | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.4:92305313-92305332 | None:intergenic | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.4:92305312-92305331 | None:intergenic | 45.0% |
| !! | TTTTAGGTGTGGCCTCCTAT+TGG | - | chr7.4:92304901-92304920 | MS.gene54465:intron | 45.0% |
| GTTGGACTAAAGTCCATGGC+TGG | - | chr7.4:92304654-92304673 | MS.gene54465:CDS | 50.0% | |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.4:92305186-92305205 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.4:92304954-92304973 | None:intergenic | 50.0% |
| !! | TCGTTGTTTTGTCGCGACCA+AGG | - | chr7.4:92305085-92305104 | MS.gene54465:intron | 50.0% |
| CGGATTGTACCGAAGAGGCA+CGG | + | chr7.4:92304617-92304636 | None:intergenic | 55.0% | |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.4:92305184-92305203 | MS.gene54465:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+CGG | - | chr7.4:92304615-92304634 | MS.gene54465:CDS | 55.0% | |
| CTCTTCGGTACAATCCGGTG+CGG | - | chr7.4:92304620-92304639 | MS.gene54465:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.4:92304670-92304689 | None:intergenic | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.4:92305005-92305024 | MS.gene54465:CDS | 55.0% |
| AACGAATGGAGCCACCGCAC+CGG | + | chr7.4:92304637-92304656 | None:intergenic | 60.0% | |
| CGCACCGGATTGTACCGAAG+AGG | + | chr7.4:92304622-92304641 | None:intergenic | 60.0% | |
| TTCGGTACAATCCGGTGCGG+TGG | - | chr7.4:92304623-92304642 | MS.gene54465:CDS | 60.0% | |
| GGTGCGGTGGCTCCATTCGT+TGG | - | chr7.4:92304636-92304655 | MS.gene54465:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 92304570 | 92305399 | 92304570 | ID=MS.gene54465 |
| chr7.4 | mRNA | 92304570 | 92305399 | 92304570 | ID=MS.gene54465.t1;Parent=MS.gene54465 |
| chr7.4 | exon | 92305220 | 92305399 | 92305220 | ID=MS.gene54465.t1.exon1;Parent=MS.gene54465.t1 |
| chr7.4 | CDS | 92305220 | 92305399 | 92305220 | ID=cds.MS.gene54465.t1;Parent=MS.gene54465.t1 |
| chr7.4 | exon | 92304928 | 92305062 | 92304928 | ID=MS.gene54465.t1.exon2;Parent=MS.gene54465.t1 |
| chr7.4 | CDS | 92304928 | 92305062 | 92304928 | ID=cds.MS.gene54465.t1;Parent=MS.gene54465.t1 |
| chr7.4 | exon | 92304570 | 92304800 | 92304570 | ID=MS.gene54465.t1.exon3;Parent=MS.gene54465.t1 |
| chr7.4 | CDS | 92304570 | 92304800 | 92304570 | ID=cds.MS.gene54465.t1;Parent=MS.gene54465.t1 |
| Gene Sequence |
| Protein sequence |
