AlfalfaGEDB | MsG0380015829.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015829.01

KEGG: K06691
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048464.01	MsG0380015829.01	0.802947	4.405685e-49	2.186185e-46
MsG0080049069.01	MsG0380015829.01	0.806017	1.008814e-49	5.417248e-47
MsG0080049147.01	MsG0380015829.01	0.815277	1.003747e-51	6.889925e-49
MsG0180000599.01	MsG0380015829.01	0.817443	3.288439e-52	2.395241e-49
MsG0180000814.01	MsG0380015829.01	0.828831	7.224985e-55	7.263282e-52
MsG0180001100.01	MsG0380015829.01	0.817314	3.516299e-52	2.552006e-49
MsG0180004025.01	MsG0380015829.01	0.826104	3.258249e-54	3.026662e-51
MsG0180004541.01	MsG0380015829.01	0.807769	4.299237e-50	2.415283e-47
MsG0180006054.01	MsG0380015829.01	0.802413	5.678060e-49	2.779685e-46
MsG0280006309.01	MsG0380015829.01	0.807288	5.438704e-50	3.017546e-47
MsG0280010598.01	MsG0380015829.01	0.824926	6.195066e-54	5.565362e-51
MsG0280010796.01	MsG0380015829.01	0.808201	3.478412e-50	1.976642e-47
MsG0280010916.01	MsG0380015829.01	0.816390	5.668284e-52	4.011124e-49
MsG0280011272.01	MsG0380015829.01	-0.807199	5.681215e-50	3.144713e-47
MsG0380012005.01	MsG0380015829.01	0.840607	7.851769e-58	1.124257e-54
MsG0380012011.01	MsG0380015829.01	0.803042	4.210770e-49	2.094535e-46
MsG0380012085.01	MsG0380015829.01	0.815599	8.511761e-52	5.894637e-49
MsG0380013342.01	MsG0380015829.01	0.819812	9.543068e-53	7.420993e-50
MsG0380014240.01	MsG0380015829.01	0.800851	1.187178e-48	5.586205e-46
MsG0380014727.01	MsG0380015829.01	0.836759	7.750356e-57	9.862375e-54
MsG0380014866.01	MsG0380015829.01	0.807850	4.132917e-50	2.326695e-47
MsG0380015829.01	MsG0380016285.01	0.818068	2.377446e-52	1.761434e-49
MsG0380015829.01	MsG0380016740.01	0.807847	4.138017e-50	2.329420e-47
MsG0380015829.01	MsG0380017202.01	0.828687	7.825521e-55	7.834700e-52
MsG0380015829.01	MsG0380017293.01	0.823726	1.185754e-53	1.029492e-50
MsG0380015829.01	MsG0380017338.01	0.803031	4.231543e-49	2.104351e-46
MsG0380015829.01	MsG0380017931.01	0.812359	4.411323e-51	2.798959e-48
MsG0380015829.01	MsG0480018236.01	0.815490	9.003314e-52	6.216566e-49
MsG0380015829.01	MsG0480018402.01	0.811599	6.458775e-51	4.014828e-48
MsG0380015829.01	MsG0480018883.01	0.806799	6.903395e-50	3.781726e-47
MsG0380015829.01	MsG0480018911.01	0.815496	8.973803e-52	6.197222e-49
MsG0380015829.01	MsG0480019435.01	0.804274	2.336695e-49	1.199740e-46
MsG0380015829.01	MsG0480020024.01	0.818612	1.790053e-52	1.346303e-49
MsG0380015829.01	MsG0480020788.01	0.811687	6.181021e-51	3.851140e-48
MsG0380015829.01	MsG0480020887.01	0.813864	2.062991e-51	1.362850e-48
MsG0380015829.01	MsG0480021561.01	0.801016	1.098697e-48	5.191719e-46
MsG0380015829.01	MsG0480022178.01	0.806613	7.555754e-50	4.119263e-47
MsG0380015829.01	MsG0480022624.01	0.801424	9.063858e-49	4.326969e-46
MsG0380015829.01	MsG0480022802.01	0.815632	8.370013e-52	5.801869e-49
MsG0380015829.01	MsG0480023251.01	0.843846	1.089755e-58	1.727113e-55
MsG0380015829.01	MsG0580024775.01	0.811025	8.605791e-51	5.269672e-48
MsG0380015829.01	MsG0580024790.01	-0.803987	2.681533e-49	1.366750e-46
MsG0380015829.01	MsG0580025686.01	0.807786	4.263082e-50	2.396086e-47
MsG0380015829.01	MsG0580025832.01	0.804716	1.889977e-49	9.815380e-47
MsG0380015829.01	MsG0580026304.01	0.801432	9.029970e-49	4.311727e-46
MsG0380015829.01	MsG0580026511.01	0.817135	3.858783e-52	2.786945e-49
MsG0380015829.01	MsG0580029999.01	-0.808687	2.739907e-50	1.576761e-47
MsG0380015829.01	MsG0680031355.01	0.806383	8.448041e-50	4.578854e-47
MsG0380015829.01	MsG0680031377.01	-0.807194	5.695191e-50	3.152021e-47
MsG0380015829.01	MsG0680032058.01	0.814182	1.754728e-51	1.169274e-48
MsG0380015829.01	MsG0680032827.01	0.810798	9.635489e-51	5.864253e-48
MsG0380015829.01	MsG0680033465.01	0.809216	2.111854e-50	1.232642e-47
MsG0380015829.01	MsG0780036128.01	0.805875	1.080779e-49	5.782533e-47
MsG0380015829.01	MsG0780036308.01	0.810051	1.397207e-50	8.337208e-48
MsG0380015829.01	MsG0780036978.01	0.853416	2.424115e-61	5.234091e-58
MsG0380015829.01	MsG0780037330.01	0.809737	1.631682e-50	9.656953e-48
MsG0380015829.01	MsG0780039438.01	0.804952	1.687138e-49	8.815668e-47
MsG0380015829.01	MsG0780039867.01	-0.815903	7.283845e-52	5.085930e-49
MsG0380015829.01	MsG0780040576.01	-0.821297	4.351859e-53	3.526528e-50
MsG0380015829.01	MsG0780041187.01	0.805060	1.601786e-49	8.392459e-47
MsG0380015829.01	MsG0780041387.01	0.809602	1.745141e-50	1.029146e-47
MsG0380015829.01	MsG0880041861.01	0.823139	1.626690e-53	1.388973e-50
MsG0380015829.01	MsG0880042022.01	0.832017	1.201546e-55	1.326459e-52
MsG0380015829.01	MsG0880042161.01	0.802816	4.688907e-49	2.319185e-46
MsG0380015829.01	MsG0880042434.01	0.802233	6.181688e-49	3.012329e-46
MsG0380015829.01	MsG0880042616.01	0.825915	3.612794e-54	3.338212e-51
MsG0380015829.01	MsG0880042622.01	0.819891	9.152377e-53	7.132902e-50
MsG0380015829.01	MsG0880042857.01	0.806005	1.014987e-49	5.448781e-47
MsG0380015829.01	MsG0880044209.01	0.827338	1.653002e-54	1.591363e-51
MsG0380015829.01	MsG0880045765.01	0.806711	7.205183e-50	3.938117e-47
MsG0380015829.01	MsG0880045992.01	0.860705	1.713954e-63	4.728581e-60
MsG0380015829.01	MsG0880047046.01	0.800348	1.503507e-48	6.984866e-46
MsG0380015829.01	MsG0880047152.01	0.806439	8.221440e-50	4.462468e-47
MsG0380015829.01	MsG0880047267.01	0.845948	2.952583e-59	5.002584e-56
MsG0280006588.01	MsG0380015829.01	0.816215	6.203646e-52	4.369209e-49
MsG0280006914.01	MsG0380015829.01	0.800509	1.393882e-48	6.501959e-46
MsG0280008112.01	MsG0380015829.01	0.832011	1.205555e-55	1.330651e-52
MsG0280008738.01	MsG0380015829.01	0.813136	2.982426e-51	1.931564e-48
MsG0280008894.01	MsG0380015829.01	0.808738	2.672908e-50	1.540188e-47
MsG0280008928.01	MsG0380015829.01	0.813399	2.610777e-51	1.703178e-48
MsG0280008932.01	MsG0380015829.01	0.804491	2.106182e-49	1.087384e-46
MsG0280009256.01	MsG0380015829.01	0.820087	8.252905e-53	6.467629e-50
MsG0280010216.01	MsG0380015829.01	0.802679	5.002804e-49	2.465688e-46
MsG0280010288.01	MsG0380015829.01	0.806682	7.305544e-50	3.989924e-47
MsG0280010517.01	MsG0380015829.01	0.803746	3.009440e-49	1.524320e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 171 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCCTGCTGCGCAGTGGTTT+TGG	0.153147	3:+75658901	MsG0380015829.01.T01:three_prime_UTR
TCAGCTATGGGCTTGAATTT+TGG	0.210619	3:+75658995	MsG0380015829.01.T01:three_prime_UTR
GGTGGTGGCGGCCGGATAAC+AGG	0.269132	3:-75656454	None:intergenic
GAATTTATTGAACCACAAAT+TGG	0.275168	3:+75657175	MsG0380015829.01.T01:five_prime_UTR
TTTACAGAAATGCCCTTCTT+TGG	0.285157	3:+75656164	MsG0380015829.01.T01:five_prime_UTR
TGAAATGTGACCTAGTTTAT+TGG	0.286044	3:-75656029	None:intergenic
TGCTAAACGCGGCGGCAATT+TGG	0.295441	3:+75656752	MsG0380015829.01.T01:five_prime_UTR
TCGATTCTTTCTTCTTGTTT+CGG	0.295730	3:-75656623	None:intergenic
TGTAGCAGCAGGTGACTAAA+AGG	0.302136	3:+75657211	MsG0380015829.01.T01:five_prime_UTR
CCATCGCCATTATTTCAGTT+TGG	0.312418	3:-75657308	None:intergenic
TTAGTCTATAATCAGGGTTT+AGG	0.321312	3:-75655944	None:intergenic
CCTAGGGTTTGGCTAGGGTT+TGG	0.322311	3:-75656125	None:intergenic
GTCAAGATCATGTGAAAATA+AGG	0.327532	3:-75657674	None:intergenic
CATCGCCATTATTTCAGTTT+GGG	0.335244	3:-75657307	None:intergenic
GATTAATTTAGTCTATAATC+AGG	0.342502	3:-75655951	None:intergenic
TGGAGTTAACGGAGGGAGAT+AGG	0.346395	3:+75656917	MsG0380015829.01.T01:five_prime_UTR
CGCCGTATTTGTGTTGGATA+AGG	0.346724	3:+75659089	MsG0380015829.01.T01:three_prime_UTR
AATTAGCCAATCAGATTTAG+AGG	0.348061	3:+75656266	MsG0380015829.01.T01:five_prime_UTR
TGTCTATTGTTTCAGGCTGT+TGG	0.360762	3:+75658827	MsG0380015829.01.T01:three_prime_UTR
AAGGTGACGTAGTTGTGTTT+TGG	0.362369	3:+75659108	MsG0380015829.01.T01:three_prime_UTR
CGGTGGTGGTGAGAGGGAAT+CGG	0.367793	3:+75656893	MsG0380015829.01.T01:five_prime_UTR
TTTGCATCTTGCAAGAGTTT+CGG	0.368118	3:+75659183	MsG0380015829.01.T01:three_prime_UTR
AACAGGGACGGTGGTGGTAG+GGG	0.370468	3:-75656437	None:intergenic
TTTCAAGGTCGACTGCTTCC+TGG	0.373417	3:+75657767	MsG0380015829.01.T01:CDS
CGCGTGCGCAGTGCTGTTAA+TGG	0.373420	3:+75657841	MsG0380015829.01.T01:CDS
TTGTTCCCAAACTGAAATAA+TGG	0.377260	3:+75657302	MsG0380015829.01.T01:five_prime_UTR
TGAAAGAAAACTGTCGATTC+CGG	0.380091	3:+75656578	MsG0380015829.01.T01:five_prime_UTR
TGCTATTCTGCTAGCTTATG+TGG	0.381379	3:-75655973	None:intergenic
TAACAACCAATCAGGTTTAG+AGG	0.381706	3:+75656298	MsG0380015829.01.T01:five_prime_UTR
TCCTCTTCCGCCGCCGCCGC+CGG	0.382196	3:-75656597	None:intergenic
GTGGGGTGGCATCACGAAAG+AGG	0.384327	3:-75656490	None:intergenic
GTCGATTCCGGCGGCGGCGG+CGG	0.387886	3:+75656590	MsG0380015829.01.T01:five_prime_UTR
AGGGAATCGGGTGGAGTTAA+CGG	0.397949	3:+75656906	MsG0380015829.01.T01:five_prime_UTR
TTTATTGGTGTTGTAAATCA+TGG	0.401586	3:-75656014	None:intergenic
CGGTCGCTTGTCCGATGCTA+TGG	0.403462	3:-75657362	None:intergenic
GGGAGGTAGTGGCTCAGCTA+TGG	0.412689	3:+75658982	MsG0380015829.01.T01:three_prime_UTR
ACTGTCGATTCCGGCGGCGG+CGG	0.414223	3:+75656587	MsG0380015829.01.T01:five_prime_UTR
ACAGACATGACAGTGAGGTT+AGG	0.415868	3:+75656667	MsG0380015829.01.T01:five_prime_UTR
TCTTCGATCCATCCAATTTG+TGG	0.418580	3:-75657187	None:intergenic
TCATAGTTTGTGGACGGCTG+TGG	0.418823	3:+75658961	MsG0380015829.01.T01:three_prime_UTR
TGGGTGGATGTTACGCCTAT+AGG	0.421369	3:+75659128	MsG0380015829.01.T01:three_prime_UTR
GGGGAAAGAAGGAGAGGTGG+TGG	0.422067	3:-75656469	None:intergenic
CCATTTGTATTGTCATGTAA+TGG	0.427101	3:-75657472	None:intergenic
ATGAAATGTGTAATTAGAAA+GGG	0.428556	3:-75656073	None:intergenic
TTTGCAAGTAACAACCAATC+AGG	0.428775	3:+75656290	MsG0380015829.01.T01:five_prime_UTR
AGTGTGATATCACATCATTT+TGG	0.429284	3:-75656189	None:intergenic
GATGAAACGAGCATTCAATA+TGG	0.429660	3:+75657409	MsG0380015829.01.T01:CDS
TAGTTGTGTTTGTCTTGAAT+TGG	0.429851	3:-75656227	None:intergenic
CAATACAAAATGCCGCCTAT+AGG	0.430621	3:-75659143	None:intergenic
AATCAAATCAGTGGCTTTCA+AGG	0.430785	3:+75657752	MsG0380015829.01.T01:CDS
GAACTGATAGAAGGTGTAGA+TGG	0.430908	3:-75656515	None:intergenic
GCCCAAAACCACTGCGCAGC+AGG	0.431054	3:-75658903	None:intergenic
AGATTTCAAAGTCATAGCTT+TGG	0.431434	3:+75659028	MsG0380015829.01.T01:three_prime_UTR
CACCTTATCCAACACAAATA+CGG	0.434127	3:-75659091	None:intergenic
GGGTTCTGTTTCCAAGTATG+AGG	0.434269	3:+75658719	MsG0380015829.01.T01:CDS
TGTGGCAGCTGCTGTTTGCT+TGG	0.434687	3:+75658936	MsG0380015829.01.T01:three_prime_UTR
ACCAAGATGATCCTAGGGTT+TGG	0.437500	3:-75656136	None:intergenic
CAGACATGACAGTGAGGTTA+GGG	0.440792	3:+75656668	MsG0380015829.01.T01:five_prime_UTR
CAACAGCAAAATAAACCAAT+AGG	0.443043	3:+75656333	MsG0380015829.01.T01:five_prime_UTR
TAAATCCTGATCATCTTGTA+TGG	0.445839	3:-75658745	None:intergenic
ACGAAACTGTACAGTTTGTT+CGG	0.446836	3:+75657703	MsG0380015829.01.T01:CDS
ACAGGGACGGTGGTGGTAGG+GGG	0.447718	3:-75656436	None:intergenic
CCACCACCGTCCCTGTTATC+CGG	0.450002	3:+75656443	MsG0380015829.01.T01:five_prime_UTR
GGTGGTGGTGAGAGGGAATC+GGG	0.451690	3:+75656894	MsG0380015829.01.T01:five_prime_UTR
TGGACGGCTGTGGGAGGTAG+TGG	0.452062	3:+75658971	MsG0380015829.01.T01:three_prime_UTR
CTACTTCGCCGTATTTGTGT+TGG	0.455066	3:+75659083	MsG0380015829.01.T01:three_prime_UTR
GCAAACCCTCTAAACCTGAT+TGG	0.455963	3:-75656304	None:intergenic
TAACAGGGACGGTGGTGGTA+GGG	0.456102	3:-75656438	None:intergenic
AACTGTACAGTTTGTTCGGT+TGG	0.458415	3:+75657707	MsG0380015829.01.T01:CDS
GGAGTCCATACAAGATGATC+AGG	0.470741	3:+75658740	MsG0380015829.01.T01:CDS
CGAATGCTTGTTCTCTTCAA+CGG	0.473839	3:-75657382	None:intergenic
GCAGCTGCCACAGCTAAAAC+AGG	0.475173	3:-75658925	None:intergenic
GTGAGAGGGGATTGCGGTGG+TGG	0.476314	3:+75656879	MsG0380015829.01.T01:five_prime_UTR
GGAGGTAGTGGCTCAGCTAT+GGG	0.476457	3:+75658983	MsG0380015829.01.T01:three_prime_UTR
GGGATTGCGGTGGTGGTGAG+AGG	0.477344	3:+75656886	MsG0380015829.01.T01:five_prime_UTR
ATTGTTTCAGGCTGTTGGCT+CGG	0.477917	3:+75658832	MsG0380015829.01.T01:three_prime_UTR
CGTGCAGCAAGATATCCTAT+TGG	0.479260	3:-75656348	None:intergenic
GAAGGAGAGGTGGTGGCGGC+CGG	0.479784	3:-75656462	None:intergenic
GCAGAATAGCAAGCTTGAAA+TGG	0.481100	3:+75655985	MsG0380015829.01.T01:five_prime_UTR
ATAACAGGGACGGTGGTGGT+AGG	0.481221	3:-75656439	None:intergenic
CCATTACATGACAATACAAA+TGG	0.482786	3:+75657472	MsG0380015829.01.T01:CDS
GCCAAACCCTAGGATCATCT+TGG	0.484423	3:+75656135	MsG0380015829.01.T01:five_prime_UTR
TCAATTTAGTTTCAACGCAC+TGG	0.486118	3:+75656846	MsG0380015829.01.T01:intron
GATGAAATGTGTAATTAGAA+AGG	0.488535	3:-75656074	None:intergenic
AGACAGAGAGAACTGATAGA+AGG	0.489640	3:-75656524	None:intergenic
TTGTATGGACTCCTCATACT+TGG	0.490596	3:-75658730	None:intergenic
GCAAACCCTCTAAATCTGAT+TGG	0.490797	3:-75656272	None:intergenic
TCTCAATCTTCTAACAATCA+TGG	0.491896	3:+75658771	MsG0380015829.01.T01:CDS
TGCTATTTATTCCATAGCAT+CGG	0.493227	3:+75657351	MsG0380015829.01.T01:CDS
TTGCTTGGAGTCATAGTTTG+TGG	0.495550	3:+75658951	MsG0380015829.01.T01:three_prime_UTR
AAGGGGATTGAAGAGGAGAA+TGG	0.497468	3:-75656055	None:intergenic
CGCGTTCGTTGCCACTCGAA+CGG	0.502287	3:-75657822	None:intergenic
TCTATCTGTGTCGTGCATAC+AGG	0.502579	3:-75657446	None:intergenic
GGGTTTAGGACTTAAGTGAA+TGG	0.505824	3:-75655930	None:intergenic
GAAAGAAGGAGAGGTGGTGG+CGG	0.517801	3:-75656466	None:intergenic
TGGGGTGGCATCACGAAAGA+GGG	0.518082	3:-75656489	None:intergenic
AGGTGTAGATGGTGGTGGGG+TGG	0.521642	3:-75656504	None:intergenic
AAAACTGTCGATTCCGGCGG+CGG	0.522016	3:+75656584	MsG0380015829.01.T01:five_prime_UTR
GGAGTTAACGGAGGGAGATA+GGG	0.522842	3:+75656918	MsG0380015829.01.T01:five_prime_UTR
TTATTGAACCACAAATTGGA+TGG	0.523678	3:+75657179	MsG0380015829.01.T01:five_prime_UTR
CATAGTTTGTGGACGGCTGT+GGG	0.525400	3:+75658962	MsG0380015829.01.T01:three_prime_UTR
CCGGATAACAGGGACGGTGG+TGG	0.527395	3:-75656443	None:intergenic
ATAGAAGGTGTAGATGGTGG+TGG	0.527715	3:-75656509	None:intergenic
AATTATATGTACACACAGAT+AGG	0.528197	3:+75655897	MsG0380015829.01.T01:five_prime_UTR
ATCACGAAAGAGGGGAAAGA+AGG	0.529374	3:-75656480	None:intergenic
AACAACCAATCAGGTTTAGA+GGG	0.532548	3:+75656299	MsG0380015829.01.T01:five_prime_UTR
TAGAAGGTGTAGATGGTGGT+GGG	0.532777	3:-75656508	None:intergenic
GATGCAAAGAAGCGGCAAAA+CGG	0.535779	3:-75659168	None:intergenic
CAGGTGACTAAAAGGAAGAC+AGG	0.541030	3:+75657219	MsG0380015829.01.T01:five_prime_UTR
AGAGGGGAAAGAAGGAGAGG+TGG	0.541221	3:-75656472	None:intergenic
AACAAACTGTACAGTTTCGT+TGG	0.541327	3:-75657700	None:intergenic
GTGGTGGCGGCCGGATAACA+GGG	0.541415	3:-75656453	None:intergenic
GGATTGCGGTGGTGGTGAGA+GGG	0.542427	3:+75656887	MsG0380015829.01.T01:five_prime_UTR
ATCTTGAATTTGTATTTACC+AGG	0.543335	3:-75657785	None:intergenic
ACTAAAAGGAAGACAGGTGT+AGG	0.544793	3:+75657225	MsG0380015829.01.T01:five_prime_UTR
AACTGTACAGTTTCGTTGGA+CGG	0.545223	3:-75657696	None:intergenic
GATGATCCTAGGGTTTGGCT+AGG	0.551283	3:-75656131	None:intergenic
CCAAACTGAAATAATGGCGA+TGG	0.553232	3:+75657308	MsG0380015829.01.T01:five_prime_UTR
TGGTGAAGATAGACTTCGAT+CGG	0.558705	3:+75656552	MsG0380015829.01.T01:five_prime_UTR
ATGATCCTAGGGTTTGGCTA+GGG	0.559063	3:-75656130	None:intergenic
ATTTACAACACCAATAAACT+AGG	0.559390	3:+75656019	MsG0380015829.01.T01:five_prime_UTR
TGGTAAATACAAATTCAAGA+TGG	0.565955	3:+75657787	MsG0380015829.01.T01:CDS
GGATCGAAGACTGTAGCAGC+AGG	0.571068	3:+75657200	MsG0380015829.01.T01:five_prime_UTR
TTGATTACCATGTGCTAATG+AGG	0.576459	3:-75656956	None:intergenic
ATTAATTTAGTCTATAATCA+GGG	0.577584	3:-75655950	None:intergenic
TGAAATGTGTAATTAGAAAG+GGG	0.578158	3:-75656072	None:intergenic
TGTTTCTGCCTGCTGCGCAG+TGG	0.581897	3:+75658895	MsG0380015829.01.T01:three_prime_UTR
ATCACACTACTCAAAGCAGC+TGG	0.586984	3:+75656204	MsG0380015829.01.T01:five_prime_UTR
AGCGAAGATGAAGATGAAGA+AGG	0.588565	3:+75657138	MsG0380015829.01.T01:five_prime_UTR
AATTAGAAAGGGGATTGAAG+AGG	0.589362	3:-75656062	None:intergenic
ATTAGCCAATCAGATTTAGA+GGG	0.590451	3:+75656267	MsG0380015829.01.T01:five_prime_UTR
AGAAGGTGTAGATGGTGGTG+GGG	0.595815	3:-75656507	None:intergenic
TGTAGGGTTTATTGTAAACA+AGG	0.600608	3:+75657242	MsG0380015829.01.T01:five_prime_UTR
ACTGGCAACACAACAGTGAG+AGG	0.601803	3:+75656864	MsG0380015829.01.T01:five_prime_UTR
ACGAGCATTCAATATGGTGG+AGG	0.602271	3:+75657415	MsG0380015829.01.T01:CDS
TTGGAGTCATAGTTTGTGGA+CGG	0.605312	3:+75658955	MsG0380015829.01.T01:three_prime_UTR
CAGGACAGAACAGAAGCTGT+TGG	0.605431	3:+75658869	MsG0380015829.01.T01:three_prime_UTR
CCAAACCCTAGCCAAACCCT+AGG	0.611987	3:+75656125	MsG0380015829.01.T01:five_prime_UTR
CAGTTCTCTCTGTCTCAAAG+TGG	0.613651	3:+75656532	MsG0380015829.01.T01:five_prime_UTR
GGTGGTGAGAGGGAATCGGG+TGG	0.617114	3:+75656897	MsG0380015829.01.T01:five_prime_UTR
GAAAGAGGGGAAAGAAGGAG+AGG	0.624303	3:-75656475	None:intergenic
AATCTGATTGGCTAATTGTG+TGG	0.625812	3:-75656260	None:intergenic
CGTCATAGCAATCAAATCAG+TGG	0.626292	3:+75657743	MsG0380015829.01.T01:CDS
CTGGCAACACAACAGTGAGA+GGG	0.627169	3:+75656865	MsG0380015829.01.T01:five_prime_UTR
AAGCTTATCAACCGTTCGAG+TGG	0.627405	3:+75657811	MsG0380015829.01.T01:CDS
CGGCCGGATAACAGGGACGG+TGG	0.630542	3:-75656446	None:intergenic
TCTTGCAAGATGCAAAGAAG+CGG	0.632112	3:-75659176	None:intergenic
CTAAAAGGAAGACAGGTGTA+GGG	0.633572	3:+75657226	MsG0380015829.01.T01:five_prime_UTR
GGTGTTGTAAATCATGGAAG+TGG	0.635469	3:-75656008	None:intergenic
CGCAGTTCTGCTAAACGCGG+CGG	0.639085	3:+75656744	MsG0380015829.01.T01:five_prime_UTR
AGTTTGTGGACGGCTGTGGG+AGG	0.640234	3:+75658965	MsG0380015829.01.T01:three_prime_UTR
GGGCTTACACTTATTAAACA+CGG	0.640828	3:+75656688	MsG0380015829.01.T01:five_prime_UTR
GAAACGAGCATTCAATATGG+TGG	0.640888	3:+75657412	MsG0380015829.01.T01:CDS
TGGCAACACAACAGTGAGAG+GGG	0.644019	3:+75656866	MsG0380015829.01.T01:five_prime_UTR
TCTGTGTCGTGCATACAGGA+AGG	0.646058	3:-75657442	None:intergenic
GAAGAGAACAAGCATTCGAA+CGG	0.646280	3:+75657387	MsG0380015829.01.T01:CDS
ACAACAGTGAGAGGGGATTG+CGG	0.647331	3:+75656873	MsG0380015829.01.T01:five_prime_UTR
GGGGTGGCATCACGAAAGAG+GGG	0.655576	3:-75656488	None:intergenic
GTCTCAGCCTCATTAGCACA+TGG	0.663300	3:+75656949	MsG0380015829.01.T01:five_prime_UTR
CTGATTGGCTAATTGTGTGG+TGG	0.669872	3:-75656257	None:intergenic
TGGCGGCCGGATAACAGGGA+CGG	0.675887	3:-75656449	None:intergenic
GTGGATGTTACGCCTATAGG+CGG	0.677402	3:+75659131	MsG0380015829.01.T01:three_prime_UTR
CTGATAGAAGGTGTAGATGG+TGG	0.678254	3:-75656512	None:intergenic
AATCGGGTGGAGTTAACGGA+GGG	0.686740	3:+75656910	MsG0380015829.01.T01:five_prime_UTR
GAATCGGGTGGAGTTAACGG+AGG	0.699783	3:+75656909	MsG0380015829.01.T01:five_prime_UTR
AAGAAAACTGTCGATTCCGG+CGG	0.704398	3:+75656581	MsG0380015829.01.T01:five_prime_UTR
ATCAAACAGACATGACAGTG+AGG	0.732212	3:+75656662	MsG0380015829.01.T01:five_prime_UTR
AAACACGGTGAGTCTAGACA+CGG	0.735199	3:+75656703	MsG0380015829.01.T01:five_prime_UTR
ACAGTGAGAGGGGATTGCGG+TGG	0.742394	3:+75656876	MsG0380015829.01.T01:five_prime_UTR
GATCGCAGTTCTGCTAAACG+CGG	0.769944	3:+75656741	MsG0380015829.01.T01:five_prime_UTR
CACGGTGAGTCTAGACACGG+CGG	0.794480	3:+75656706	MsG0380015829.01.T01:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATATTACTTTAATTGTATT+TGG	+	Chr3:75658403-75658422	MsG0380015829.01.T01:intron	10.0%
!!	ATTAATTTAGTCTATAATCA+GGG	-	Chr3:75655953-75655972	None:intergenic	15.0%
!!	TAAAGATCAAATAAATTATG+AGG	-	Chr3:75657603-75657622	None:intergenic	15.0%
!!!	AATAAAGGTGTAAATTTATA+AGG	-	Chr3:75657920-75657939	None:intergenic	15.0%
!!	AAACAAAAAGGAAAGAAATT+TGG	+	Chr3:75658608-75658627	MsG0380015829.01.T01:intron	20.0%
!!	ATGAAATGTGTAATTAGAAA+GGG	-	Chr3:75656076-75656095	None:intergenic	20.0%
!!	GACAAAAAAATCTTCATATA+AGG	-	Chr3:75657977-75657996	None:intergenic	20.0%
!!	GATACAAATTATAAACTCAA+AGG	-	Chr3:75658243-75658262	None:intergenic	20.0%
!!	GATTAATTTAGTCTATAATC+AGG	-	Chr3:75655954-75655973	None:intergenic	20.0%
!!	TACTTTAATTGTATTTGGTA+TGG	+	Chr3:75658408-75658427	MsG0380015829.01.T01:intron	20.0%
!!	TTCATCTAACTATACAAAAA+AGG	+	Chr3:75656091-75656110	MsG0380015829.01.T01:five_prime_UTR	20.0%
!!!	AGATCATTTGTTTTAGAATA+AGG	+	Chr3:75658585-75658604	MsG0380015829.01.T01:intron	20.0%
!!!	TTTAGAATAAGGAAACAAAA+AGG	+	Chr3:75658596-75658615	MsG0380015829.01.T01:intron	20.0%
!!!	TTTTTTTGTCCTCTTAATTA+TGG	+	Chr3:75657987-75658006	MsG0380015829.01.T01:intron	20.0%
!	AAACCAAAAATTAAAGCAGA+AGG	-	Chr3:75656999-75657018	None:intergenic	25.0%
!	AAGCAGAATAAGATTGTATT+TGG	+	Chr3:75658288-75658307	MsG0380015829.01.T01:intron	25.0%
!	AATCCACTGAAATAATGAAA+AGG	-	Chr3:75657029-75657048	None:intergenic	25.0%
!	AATTATATGTACACACAGAT+AGG	+	Chr3:75655897-75655916	MsG0380015829.01.T01:five_prime_UTR	25.0%
!	ACAATTAGCTACAAATGTTT+CGG	+	Chr3:75657106-75657125	MsG0380015829.01.T01:intron	25.0%
!	AGAGTGAGAAAACATAATTT+GGG	-	Chr3:75658114-75658133	None:intergenic	25.0%
!	ATCAATTTGAGTCACAAAAA+AGG	-	Chr3:75658265-75658284	None:intergenic	25.0%
!	ATCCACTGAAATAATGAAAA+GGG	-	Chr3:75657028-75657047	None:intergenic	25.0%
!	ATCTTGAATTTGTATTTACC+AGG	-	Chr3:75657788-75657807	None:intergenic	25.0%
!	ATTATAATTAGCGAGTCAAT+TGG	-	Chr3:75658158-75658177	None:intergenic	25.0%
!	ATTTACAACACCAATAAACT+AGG	+	Chr3:75656019-75656038	MsG0380015829.01.T01:five_prime_UTR	25.0%
!	CTAATTATAATACAACCCTT+CGG	+	Chr3:75658167-75658186	MsG0380015829.01.T01:intron	25.0%
!	GAATAAGATTGTATTTGGTA+TGG	+	Chr3:75658293-75658312	MsG0380015829.01.T01:intron	25.0%
!	GAATTTATTGAACCACAAAT+TGG	+	Chr3:75657175-75657194	MsG0380015829.01.T01:five_prime_UTR	25.0%
!	GATGAAATGTGTAATTAGAA+AGG	-	Chr3:75656077-75656096	None:intergenic	25.0%
!	TGAAATGTGTAATTAGAAAG+GGG	-	Chr3:75656075-75656094	None:intergenic	25.0%
!	TGGTAAATACAAATTCAAGA+TGG	+	Chr3:75657787-75657806	MsG0380015829.01.T01:CDS	25.0%
!	TTATAATTAGCGAGTCAATT+GGG	-	Chr3:75658157-75658176	None:intergenic	25.0%
!!!	ATTCCTTCTGCTTTAATTTT+TGG	+	Chr3:75656993-75657012	MsG0380015829.01.T01:intron	25.0%
!!!	ATTTTAGTGTCTATTGTTTC+AGG	+	Chr3:75658820-75658839	MsG0380015829.01.T01:three_prime_UTR	25.0%
!!!	TTGTCCTTTTAATTATTGAC+TGG	+	Chr3:75658047-75658066	MsG0380015829.01.T01:intron	25.0%
!!!	TTTATTGGTGTTGTAAATCA+TGG	-	Chr3:75656017-75656036	None:intergenic	25.0%
!!!	TTTTGGTTGTGGTATTTTTA+GGG	+	Chr3:75659059-75659078	MsG0380015829.01.T01:three_prime_UTR	25.0%
!!!	TTTTTGGTTGTGGTATTTTT+AGG	+	Chr3:75659058-75659077	MsG0380015829.01.T01:three_prime_UTR	25.0%
	AAAAAAACCAAGATGATCCT+AGG	-	Chr3:75656145-75656164	None:intergenic	30.0%
	AAAAAACCAAGATGATCCTA+GGG	-	Chr3:75656144-75656163	None:intergenic	30.0%
	AATTAGCCAATCAGATTTAG+AGG	+	Chr3:75656266-75656285	MsG0380015829.01.T01:five_prime_UTR	30.0%
	ACATGGTAATCAATCTTTAC+AGG	+	Chr3:75656966-75656985	MsG0380015829.01.T01:intron	30.0%
	AGATTTCAAAGTCATAGCTT+TGG	+	Chr3:75659028-75659047	MsG0380015829.01.T01:three_prime_UTR	30.0%
	AGTGAGAAAACATAATTTGG+GGG	-	Chr3:75658112-75658131	None:intergenic	30.0%
	ATTAGCCAATCAGATTTAGA+GGG	+	Chr3:75656267-75656286	MsG0380015829.01.T01:five_prime_UTR	30.0%
	ATTGTACAGTGGTAGTTATA+AGG	+	Chr3:75658325-75658344	MsG0380015829.01.T01:intron	30.0%
	CAACAGCAAAATAAACCAAT+AGG	+	Chr3:75656333-75656352	MsG0380015829.01.T01:five_prime_UTR	30.0%
	CAGAGTGAGAAAACATAATT+TGG	-	Chr3:75658115-75658134	None:intergenic	30.0%
	CATCAGTAGCAACAAAATAA+CGG	-	Chr3:75657526-75657545	None:intergenic	30.0%
	CCAACCAGTCAATAATTAAA+AGG	-	Chr3:75658054-75658073	None:intergenic	30.0%
	CCATTACATGACAATACAAA+TGG	+	Chr3:75657472-75657491	MsG0380015829.01.T01:CDS	30.0%
	CCATTTGTATTGTCATGTAA+TGG	-	Chr3:75657475-75657494	None:intergenic	30.0%
	GAGTGAGAAAACATAATTTG+GGG	-	Chr3:75658113-75658132	None:intergenic	30.0%
	GATTAACTGAACACAATACT+TGG	+	Chr3:75658547-75658566	MsG0380015829.01.T01:intron	30.0%
	GTCAAGATCATGTGAAAATA+AGG	-	Chr3:75657677-75657696	None:intergenic	30.0%
	TAAATCCTGATCATCTTGTA+TGG	-	Chr3:75658748-75658767	None:intergenic	30.0%
	TAGTTGTGTTTGTCTTGAAT+TGG	-	Chr3:75656230-75656249	None:intergenic	30.0%
	TCAATAATCATACACAACTC+AGG	-	Chr3:75656808-75656827	None:intergenic	30.0%
	TCTCAATCTTCTAACAATCA+TGG	+	Chr3:75658771-75658790	MsG0380015829.01.T01:CDS	30.0%
	TGAAATGTGACCTAGTTTAT+TGG	-	Chr3:75656032-75656051	None:intergenic	30.0%
	TGTAGGGTTTATTGTAAACA+AGG	+	Chr3:75657242-75657261	MsG0380015829.01.T01:five_prime_UTR	30.0%
	TTAGTCTATAATCAGGGTTT+AGG	-	Chr3:75655947-75655966	None:intergenic	30.0%
	TTATTGAACCACAAATTGGA+TGG	+	Chr3:75657179-75657198	MsG0380015829.01.T01:five_prime_UTR	30.0%
	TTGTACAGTGGTAGTTATAA+GGG	+	Chr3:75658326-75658345	MsG0380015829.01.T01:intron	30.0%
	TTGTTCCCAAACTGAAATAA+TGG	+	Chr3:75657302-75657321	MsG0380015829.01.T01:five_prime_UTR	30.0%
!	AGTGTGATATCACATCATTT+TGG	-	Chr3:75656192-75656211	None:intergenic	30.0%
!	TCGATTCTTTCTTCTTGTTT+CGG	-	Chr3:75656626-75656645	None:intergenic	30.0%
!	TGCTATTTATTCCATAGCAT+CGG	+	Chr3:75657351-75657370	MsG0380015829.01.T01:CDS	30.0%
!	TTCCCTTTTCATTATTTCAG+TGG	+	Chr3:75657023-75657042	MsG0380015829.01.T01:intron	30.0%
!!	CCTTTTAATTATTGACTGGT+TGG	+	Chr3:75658051-75658070	MsG0380015829.01.T01:intron	30.0%
!!	GTTATTTTGTTGCTACTGAT+GGG	+	Chr3:75657525-75657544	MsG0380015829.01.T01:intron	30.0%
!!	TTCAGTTTTGTCTTTTCTTG+AGG	+	Chr3:75658689-75658708	MsG0380015829.01.T01:CDS	30.0%
!!!	TTTGGTTGTGGTATTTTTAG+GGG	+	Chr3:75659060-75659079	MsG0380015829.01.T01:three_prime_UTR	30.0%
	AACAAACTGTACAGTTTCGT+TGG	-	Chr3:75657703-75657722	None:intergenic	35.0%
	AACAACCAATCAGGTTTAGA+GGG	+	Chr3:75656299-75656318	MsG0380015829.01.T01:five_prime_UTR	35.0%
	AATCAAATCAGTGGCTTTCA+AGG	+	Chr3:75657752-75657771	MsG0380015829.01.T01:CDS	35.0%
	AATGTCGGCGACATAAATAA+AGG	-	Chr3:75657935-75657954	None:intergenic	35.0%
	AATTAGAAAGGGGATTGAAG+AGG	-	Chr3:75656065-75656084	None:intergenic	35.0%
	AGAAAACATAATTTGGGGGT+GGG	-	Chr3:75658108-75658127	None:intergenic	35.0%
	ATACCACAACCAAAAAAGCA+TGG	-	Chr3:75659054-75659073	None:intergenic	35.0%
	ATTGTACAGTGGCAGTTATA+AGG	+	Chr3:75658522-75658541	MsG0380015829.01.T01:intron	35.0%
	CACCTTATCCAACACAAATA+CGG	-	Chr3:75659094-75659113	None:intergenic	35.0%
	CATCGCCATTATTTCAGTTT+GGG	-	Chr3:75657310-75657329	None:intergenic	35.0%
	GATGAAACGAGCATTCAATA+TGG	+	Chr3:75657409-75657428	MsG0380015829.01.T01:CDS	35.0%
	GGGCTTACACTTATTAAACA+CGG	+	Chr3:75656688-75656707	MsG0380015829.01.T01:five_prime_UTR	35.0%
	GGTAGAATAAGATTGTACAG+TGG	+	Chr3:75658314-75658333	MsG0380015829.01.T01:intron	35.0%
	TAACAACCAATCAGGTTTAG+AGG	+	Chr3:75656298-75656317	MsG0380015829.01.T01:five_prime_UTR	35.0%
	TACACAACTCAGGAAAGAAA+AGG	-	Chr3:75656798-75656817	None:intergenic	35.0%
	TCTAATGACTTCTTGCAAAG+AGG	-	Chr3:75658217-75658236	None:intergenic	35.0%
	TTGATTACCATGTGCTAATG+AGG	-	Chr3:75656959-75656978	None:intergenic	35.0%
	TTGTACAGTGGCAGTTATAA+GGG	+	Chr3:75658523-75658542	MsG0380015829.01.T01:intron	35.0%
	TTGTCCTCTTAATTATGGAC+TGG	+	Chr3:75657992-75658011	MsG0380015829.01.T01:intron	35.0%
	TTTACAGAAATGCCCTTCTT+TGG	+	Chr3:75656164-75656183	MsG0380015829.01.T01:five_prime_UTR	35.0%
	TTTATTTATGTCGCCGACAT+TGG	+	Chr3:75657934-75657953	MsG0380015829.01.T01:intron	35.0%
	TTTGCAAGTAACAACCAATC+AGG	+	Chr3:75656290-75656309	MsG0380015829.01.T01:five_prime_UTR	35.0%
	TTTGCATCTTGCAAGAGTTT+CGG	+	Chr3:75659183-75659202	MsG0380015829.01.T01:three_prime_UTR	35.0%
!	AATCTGATTGGCTAATTGTG+TGG	-	Chr3:75656263-75656282	None:intergenic	35.0%
!	ACGAAACTGTACAGTTTGTT+CGG	+	Chr3:75657703-75657722	MsG0380015829.01.T01:CDS	35.0%
!	CTGATTCAATTTTCATCCCT+TGG	+	Chr3:75658658-75658677	MsG0380015829.01.T01:intron	35.0%
!	TCAATTTAGTTTCAACGCAC+TGG	+	Chr3:75656846-75656865	MsG0380015829.01.T01:intron	35.0%
!!	CGTTATTTTGTTGCTACTGA+TGG	+	Chr3:75657524-75657543	MsG0380015829.01.T01:intron	35.0%
!!	TGAAAGAAAACTGTCGATTC+CGG	+	Chr3:75656578-75656597	MsG0380015829.01.T01:five_prime_UTR	35.0%
!!	TTCAGTGGATTGATTCATTC+TGG	+	Chr3:75657038-75657057	MsG0380015829.01.T01:intron	35.0%
!!!	ATCATTTTGGCTCCAAAGAA+GGG	-	Chr3:75656179-75656198	None:intergenic	35.0%
	AAAACTGAACTTGTCTGCCA+AGG	-	Chr3:75658678-75658697	None:intergenic	40.0%
	AAACTGAACTTGTCTGCCAA+GGG	-	Chr3:75658677-75658696	None:intergenic	40.0%
	AACAGCAAGACATTACACAG+CGG	-	Chr3:75657869-75657888	None:intergenic	40.0%
	AACTGTACAGTTTCGTTGGA+CGG	-	Chr3:75657699-75657718	None:intergenic	40.0%
	ACTAAAAGGAAGACAGGTGT+AGG	+	Chr3:75657225-75657244	MsG0380015829.01.T01:five_prime_UTR	40.0%
	ACTGCATCATCATATGTGTG+TGG	-	Chr3:75657562-75657581	None:intergenic	40.0%
	AGACAGAGAGAACTGATAGA+AGG	-	Chr3:75656527-75656546	None:intergenic	40.0%
	AGCGAAGATGAAGATGAAGA+AGG	+	Chr3:75657138-75657157	MsG0380015829.01.T01:five_prime_UTR	40.0%
	ATCAAACAGACATGACAGTG+AGG	+	Chr3:75656662-75656681	MsG0380015829.01.T01:five_prime_UTR	40.0%
	CAATACAAAATGCCGCCTAT+AGG	-	Chr3:75659146-75659165	None:intergenic	40.0%
	CCAAACTGAAATAATGGCGA+TGG	+	Chr3:75657308-75657327	MsG0380015829.01.T01:five_prime_UTR	40.0%
	CCATCGCCATTATTTCAGTT+TGG	-	Chr3:75657311-75657330	None:intergenic	40.0%
	CGAATGCTTGTTCTCTTCAA+CGG	-	Chr3:75657385-75657404	None:intergenic	40.0%
	CGTCATAGCAATCAAATCAG+TGG	+	Chr3:75657743-75657762	MsG0380015829.01.T01:CDS	40.0%
	CTAAAAGGAAGACAGGTGTA+GGG	+	Chr3:75657226-75657245	MsG0380015829.01.T01:five_prime_UTR	40.0%
	GAAACGAGCATTCAATATGG+TGG	+	Chr3:75657412-75657431	MsG0380015829.01.T01:CDS	40.0%
	GAAGAGAACAAGCATTCGAA+CGG	+	Chr3:75657387-75657406	MsG0380015829.01.T01:CDS	40.0%
	GAGAAAACATAATTTGGGGG+TGG	-	Chr3:75658109-75658128	None:intergenic	40.0%
	GCAAACCCTCTAAATCTGAT+TGG	-	Chr3:75656275-75656294	None:intergenic	40.0%
	GCAGAATAGCAAGCTTGAAA+TGG	+	Chr3:75655985-75656004	MsG0380015829.01.T01:five_prime_UTR	40.0%
	GGTTTGAATGCAAAGACAGA+AGG	-	Chr3:75657505-75657524	None:intergenic	40.0%
	TCTTCGATCCATCCAATTTG+TGG	-	Chr3:75657190-75657209	None:intergenic	40.0%
	TCTTGCAAGATGCAAAGAAG+CGG	-	Chr3:75659179-75659198	None:intergenic	40.0%
	TGGTGAAGATAGACTTCGAT+CGG	+	Chr3:75656552-75656571	MsG0380015829.01.T01:five_prime_UTR	40.0%
	TGTCTATTGTTTCAGGCTGT+TGG	+	Chr3:75658827-75658846	MsG0380015829.01.T01:three_prime_UTR	40.0%
	TTGCTTGGAGTCATAGTTTG+TGG	+	Chr3:75658951-75658970	MsG0380015829.01.T01:three_prime_UTR	40.0%
	TTGTATGGACTCCTCATACT+TGG	-	Chr3:75658733-75658752	None:intergenic	40.0%
!	AACTGTACAGTTTGTTCGGT+TGG	+	Chr3:75657707-75657726	MsG0380015829.01.T01:CDS	40.0%
!	AAGGTGACGTAGTTGTGTTT+TGG	+	Chr3:75659108-75659127	MsG0380015829.01.T01:three_prime_UTR	40.0%
!	AGGTGACGTAGTTGTGTTTT+GGG	+	Chr3:75659109-75659128	MsG0380015829.01.T01:three_prime_UTR	40.0%
!	ATTGGGAAGTACAACATCGA+TGG	-	Chr3:75658140-75658159	None:intergenic	40.0%
!	GAACTGATAGAAGGTGTAGA+TGG	-	Chr3:75656518-75656537	None:intergenic	40.0%
!	GGGTTTAGGACTTAAGTGAA+TGG	-	Chr3:75655933-75655952	None:intergenic	40.0%
!	GGTGTTGTAAATCATGGAAG+TGG	-	Chr3:75656011-75656030	None:intergenic	40.0%
!	TCAGCTATGGGCTTGAATTT+TGG	+	Chr3:75658995-75659014	MsG0380015829.01.T01:three_prime_UTR	40.0%
!	TCTTTTCTTGAGGCTCTTGA+GGG	+	Chr3:75658699-75658718	MsG0380015829.01.T01:CDS	40.0%
!	TGCTATTCTGCTAGCTTATG+TGG	-	Chr3:75655976-75655995	None:intergenic	40.0%
!	TTGGAGTCATAGTTTGTGGA+CGG	+	Chr3:75658955-75658974	MsG0380015829.01.T01:three_prime_UTR	40.0%
!!	CTCTTAATTATGGACTGGCT+GGG	+	Chr3:75657997-75658016	MsG0380015829.01.T01:intron	40.0%
!!	GTGTAATGTCTTGCTGTTTG+TGG	+	Chr3:75657871-75657890	MsG0380015829.01.T01:intron	40.0%
!!!	CATCATTTTGGCTCCAAAGA+AGG	-	Chr3:75656180-75656199	None:intergenic	40.0%
!!!	TAGCTTTGGCCATGCTTTTT+TGG	+	Chr3:75659042-75659061	MsG0380015829.01.T01:three_prime_UTR	40.0%
	AAACACGGTGAGTCTAGACA+CGG	+	Chr3:75656703-75656722	MsG0380015829.01.T01:five_prime_UTR	45.0%
	AAGCTTATCAACCGTTCGAG+TGG	+	Chr3:75657811-75657830	MsG0380015829.01.T01:CDS	45.0%
	AAGGGGATTGAAGAGGAGAA+TGG	-	Chr3:75656058-75656077	None:intergenic	45.0%
	ACAGACATGACAGTGAGGTT+AGG	+	Chr3:75656667-75656686	MsG0380015829.01.T01:five_prime_UTR	45.0%
	ACCAAGATGATCCTAGGGTT+TGG	-	Chr3:75656139-75656158	None:intergenic	45.0%
	ACGAGCATTCAATATGGTGG+AGG	+	Chr3:75657415-75657434	MsG0380015829.01.T01:CDS	45.0%
	ATCACACTACTCAAAGCAGC+TGG	+	Chr3:75656204-75656223	MsG0380015829.01.T01:five_prime_UTR	45.0%
	ATCACGAAAGAGGGGAAAGA+AGG	-	Chr3:75656483-75656502	None:intergenic	45.0%
	ATGATCCTAGGGTTTGGCTA+GGG	-	Chr3:75656133-75656152	None:intergenic	45.0%
	CAGACATGACAGTGAGGTTA+GGG	+	Chr3:75656668-75656687	MsG0380015829.01.T01:five_prime_UTR	45.0%
	CAGGTGACTAAAAGGAAGAC+AGG	+	Chr3:75657219-75657238	MsG0380015829.01.T01:five_prime_UTR	45.0%
	CAGTTCTCTCTGTCTCAAAG+TGG	+	Chr3:75656532-75656551	MsG0380015829.01.T01:five_prime_UTR	45.0%
	CCAGCCAGTCCATAATTAAG+AGG	-	Chr3:75657999-75658018	None:intergenic	45.0%
	CGCCGTATTTGTGTTGGATA+AGG	+	Chr3:75659089-75659108	MsG0380015829.01.T01:three_prime_UTR	45.0%
	CGTGCAGCAAGATATCCTAT+TGG	-	Chr3:75656351-75656370	None:intergenic	45.0%
	CTACTTCGCCGTATTTGTGT+TGG	+	Chr3:75659083-75659102	MsG0380015829.01.T01:three_prime_UTR	45.0%
	GATGCAAAGAAGCGGCAAAA+CGG	-	Chr3:75659171-75659190	None:intergenic	45.0%
	GCAAACCCTCTAAACCTGAT+TGG	-	Chr3:75656307-75656326	None:intergenic	45.0%
	GGAGTCCATACAAGATGATC+AGG	+	Chr3:75658740-75658759	MsG0380015829.01.T01:CDS	45.0%
	GGGTTCTGTTTCCAAGTATG+AGG	+	Chr3:75658719-75658738	MsG0380015829.01.T01:CDS	45.0%
	TCTATCTGTGTCGTGCATAC+AGG	-	Chr3:75657449-75657468	None:intergenic	45.0%
	TGTAGCAGCAGGTGACTAAA+AGG	+	Chr3:75657211-75657230	MsG0380015829.01.T01:five_prime_UTR	45.0%
!	ATAGAAGGTGTAGATGGTGG+TGG	-	Chr3:75656512-75656531	None:intergenic	45.0%
!	ATTGTTTCAGGCTGTTGGCT+CGG	+	Chr3:75658832-75658851	MsG0380015829.01.T01:three_prime_UTR	45.0%
!	CTGATAGAAGGTGTAGATGG+TGG	-	Chr3:75656515-75656534	None:intergenic	45.0%
!	CTGATTGGCTAATTGTGTGG+TGG	-	Chr3:75656260-75656279	None:intergenic	45.0%
!	GTCTTTTCTTGAGGCTCTTG+AGG	+	Chr3:75658698-75658717	MsG0380015829.01.T01:CDS	45.0%
!	GTTTGAGATGGTGCACTAGA+CGG	+	Chr3:75658189-75658208	MsG0380015829.01.T01:intron	45.0%
!	TACAACCCTTCGGTTTGAGA+TGG	+	Chr3:75658177-75658196	MsG0380015829.01.T01:intron	45.0%
!	TAGAAGGTGTAGATGGTGGT+GGG	-	Chr3:75656511-75656530	None:intergenic	45.0%
!	TGTTTTGCCACGACCAATGT+CGG	-	Chr3:75657950-75657969	None:intergenic	45.0%
!!	AAGAAAACTGTCGATTCCGG+CGG	+	Chr3:75656581-75656600	MsG0380015829.01.T01:five_prime_UTR	45.0%
!!	CCTCTTAATTATGGACTGGC+TGG	+	Chr3:75657996-75658015	MsG0380015829.01.T01:intron	45.0%
!!	TGACGTAGTTGTGTTTTGGG+TGG	+	Chr3:75659112-75659131	MsG0380015829.01.T01:three_prime_UTR	45.0%
!!!	TGGCCATGCTTTTTTGGTTG+TGG	+	Chr3:75659048-75659067	MsG0380015829.01.T01:three_prime_UTR	45.0%
!!!	TTTTGGGCCTGTTTTAGCTG+TGG	+	Chr3:75658918-75658937	MsG0380015829.01.T01:three_prime_UTR	45.0%
	AATCGGGTGGAGTTAACGGA+GGG	+	Chr3:75656910-75656929	MsG0380015829.01.T01:five_prime_UTR	50.0%
	ACAACAGTGAGAGGGGATTG+CGG	+	Chr3:75656873-75656892	MsG0380015829.01.T01:five_prime_UTR	50.0%
	ACTGGCAACACAACAGTGAG+AGG	+	Chr3:75656864-75656883	MsG0380015829.01.T01:five_prime_UTR	50.0%
	AGGGAATCGGGTGGAGTTAA+CGG	+	Chr3:75656906-75656925	MsG0380015829.01.T01:five_prime_UTR	50.0%
	AGTGCACCATCTCAAACCGA+AGG	-	Chr3:75658186-75658205	None:intergenic	50.0%
	CAGGACAGAACAGAAGCTGT+TGG	+	Chr3:75658869-75658888	MsG0380015829.01.T01:three_prime_UTR	50.0%
	CATTGGTCGTGGCAAAACAG+AGG	+	Chr3:75657951-75657970	MsG0380015829.01.T01:intron	50.0%
	CTGGCAACACAACAGTGAGA+GGG	+	Chr3:75656865-75656884	MsG0380015829.01.T01:five_prime_UTR	50.0%
	GAAAGAGGGGAAAGAAGGAG+AGG	-	Chr3:75656478-75656497	None:intergenic	50.0%
	GATCGCAGTTCTGCTAAACG+CGG	+	Chr3:75656741-75656760	MsG0380015829.01.T01:five_prime_UTR	50.0%
	GATGATCCTAGGGTTTGGCT+AGG	-	Chr3:75656134-75656153	None:intergenic	50.0%
	GCCAAACCCTAGGATCATCT+TGG	+	Chr3:75656135-75656154	MsG0380015829.01.T01:five_prime_UTR	50.0%
	GGAGTTAACGGAGGGAGATA+GGG	+	Chr3:75656918-75656937	MsG0380015829.01.T01:five_prime_UTR	50.0%
	GTCTCAGCCTCATTAGCACA+TGG	+	Chr3:75656949-75656968	MsG0380015829.01.T01:five_prime_UTR	50.0%
	GTGCACCATCTCAAACCGAA+GGG	-	Chr3:75658185-75658204	None:intergenic	50.0%
	GTGGATGTTACGCCTATAGG+CGG	+	Chr3:75659131-75659150	MsG0380015829.01.T01:three_prime_UTR	50.0%
	TCTGTGTCGTGCATACAGGA+AGG	-	Chr3:75657445-75657464	None:intergenic	50.0%
	TGGAGTTAACGGAGGGAGAT+AGG	+	Chr3:75656917-75656936	MsG0380015829.01.T01:five_prime_UTR	50.0%
	TGGCAACACAACAGTGAGAG+GGG	+	Chr3:75656866-75656885	MsG0380015829.01.T01:five_prime_UTR	50.0%
	TGGGTGGATGTTACGCCTAT+AGG	+	Chr3:75659128-75659147	MsG0380015829.01.T01:three_prime_UTR	50.0%
	TTTCAAGGTCGACTGCTTCC+TGG	+	Chr3:75657767-75657786	MsG0380015829.01.T01:CDS	50.0%
!	AGAAGGTGTAGATGGTGGTG+GGG	-	Chr3:75656510-75656529	None:intergenic	50.0%
!	CATAGTTTGTGGACGGCTGT+GGG	+	Chr3:75658962-75658981	MsG0380015829.01.T01:three_prime_UTR	50.0%
!	TCATAGTTTGTGGACGGCTG+TGG	+	Chr3:75658961-75658980	MsG0380015829.01.T01:three_prime_UTR	50.0%
	AACGCGGCGGCAATTTGGTA+AGG	+	Chr3:75656757-75656776	MsG0380015829.01.T01:intron	55.0%
	AGAGGGGAAAGAAGGAGAGG+TGG	-	Chr3:75656475-75656494	None:intergenic	55.0%
	CCAAACCCTAGCCAAACCCT+AGG	+	Chr3:75656125-75656144	MsG0380015829.01.T01:five_prime_UTR	55.0%
	CCTAGGGTTTGGCTAGGGTT+TGG	-	Chr3:75656128-75656147	None:intergenic	55.0%
	GAATCGGGTGGAGTTAACGG+AGG	+	Chr3:75656909-75656928	MsG0380015829.01.T01:five_prime_UTR	55.0%
	GCAGCTGCCACAGCTAAAAC+AGG	-	Chr3:75658928-75658947	None:intergenic	55.0%
	GGATCGAAGACTGTAGCAGC+AGG	+	Chr3:75657200-75657219	MsG0380015829.01.T01:five_prime_UTR	55.0%
	TATGTCGCCGACATTGGTCG+TGG	+	Chr3:75657940-75657959	MsG0380015829.01.T01:intron	55.0%
	TGCTAAACGCGGCGGCAATT+TGG	+	Chr3:75656752-75656771	MsG0380015829.01.T01:five_prime_UTR	55.0%
	TGGGGTGGCATCACGAAAGA+GGG	-	Chr3:75656492-75656511	None:intergenic	55.0%
!	ATAACAGGGACGGTGGTGGT+AGG	-	Chr3:75656442-75656461	None:intergenic	55.0%
!	GAAAGAAGGAGAGGTGGTGG+CGG	-	Chr3:75656469-75656488	None:intergenic	55.0%
!	GGAGGTAGTGGCTCAGCTAT+GGG	+	Chr3:75658983-75659002	MsG0380015829.01.T01:three_prime_UTR	55.0%
!	TAACAGGGACGGTGGTGGTA+GGG	-	Chr3:75656441-75656460	None:intergenic	55.0%
!	TGTGGCAGCTGCTGTTTGCT+TGG	+	Chr3:75658936-75658955	MsG0380015829.01.T01:three_prime_UTR	55.0%
!!	AAAACTGTCGATTCCGGCGG+CGG	+	Chr3:75656584-75656603	MsG0380015829.01.T01:five_prime_UTR	55.0%
!!!	CAGGCTGTTGGCTCGGTTTT+AGG	+	Chr3:75658839-75658858	MsG0380015829.01.T01:three_prime_UTR	55.0%
!!!	CTCGGTTTTAGGCTGCTGTC+AGG	+	Chr3:75658850-75658869	MsG0380015829.01.T01:three_prime_UTR	55.0%
	ACAGTGAGAGGGGATTGCGG+TGG	+	Chr3:75656876-75656895	MsG0380015829.01.T01:five_prime_UTR	60.0%
	AGTTTGTGGACGGCTGTGGG+AGG	+	Chr3:75658965-75658984	MsG0380015829.01.T01:three_prime_UTR	60.0%
	CACGGTGAGTCTAGACACGG+CGG	+	Chr3:75656706-75656725	MsG0380015829.01.T01:five_prime_UTR	60.0%
	CCACCACCGTCCCTGTTATC+CGG	+	Chr3:75656443-75656462	MsG0380015829.01.T01:five_prime_UTR	60.0%
	CGCAGTTCTGCTAAACGCGG+CGG	+	Chr3:75656744-75656763	MsG0380015829.01.T01:five_prime_UTR	60.0%
	CGCGTTCGTTGCCACTCGAA+CGG	-	Chr3:75657825-75657844	None:intergenic	60.0%
	CGGTCGCTTGTCCGATGCTA+TGG	-	Chr3:75657365-75657384	None:intergenic	60.0%
	GGGGAAAGAAGGAGAGGTGG+TGG	-	Chr3:75656472-75656491	None:intergenic	60.0%
	GGGGTGGCATCACGAAAGAG+GGG	-	Chr3:75656491-75656510	None:intergenic	60.0%
	GTGGGGTGGCATCACGAAAG+AGG	-	Chr3:75656493-75656512	None:intergenic	60.0%
	GTGGTGGTAGGGGGAGAACA+GGG	-	Chr3:75656430-75656449	None:intergenic	60.0%
	TGGTGGTAGGGGGAGAACAG+GGG	-	Chr3:75656429-75656448	None:intergenic	60.0%
!	AACAGGGACGGTGGTGGTAG+GGG	-	Chr3:75656440-75656459	None:intergenic	60.0%
!	CGCGTGCGCAGTGCTGTTAA+TGG	+	Chr3:75657841-75657860	MsG0380015829.01.T01:CDS	60.0%
!	CGGTGGTGGTGAGAGGGAAT+CGG	+	Chr3:75656893-75656912	MsG0380015829.01.T01:five_prime_UTR	60.0%
!	GCCTGCTGCGCAGTGGTTTT+GGG	+	Chr3:75658902-75658921	MsG0380015829.01.T01:three_prime_UTR	60.0%
!	GGATTGCGGTGGTGGTGAGA+GGG	+	Chr3:75656887-75656906	MsG0380015829.01.T01:five_prime_UTR	60.0%
!	GGGAGGTAGTGGCTCAGCTA+TGG	+	Chr3:75658982-75659001	MsG0380015829.01.T01:three_prime_UTR	60.0%
!	GGTGGTGGTGAGAGGGAATC+GGG	+	Chr3:75656894-75656913	MsG0380015829.01.T01:five_prime_UTR	60.0%
!	TGCCTGCTGCGCAGTGGTTT+TGG	+	Chr3:75658901-75658920	MsG0380015829.01.T01:three_prime_UTR	60.0%
!	TGTTTCTGCCTGCTGCGCAG+TGG	+	Chr3:75658895-75658914	MsG0380015829.01.T01:three_prime_UTR	60.0%
!!	AGGTGTAGATGGTGGTGGGG+TGG	-	Chr3:75656507-75656526	None:intergenic	60.0%
	CCGGATAACAGGGACGGTGG+TGG	-	Chr3:75656446-75656465	None:intergenic	65.0%
	GCCCAAAACCACTGCGCAGC+AGG	-	Chr3:75658906-75658925	None:intergenic	65.0%
	GGTGGTGAGAGGGAATCGGG+TGG	+	Chr3:75656897-75656916	MsG0380015829.01.T01:five_prime_UTR	65.0%
	GTGAGAGGGGATTGCGGTGG+TGG	+	Chr3:75656879-75656898	MsG0380015829.01.T01:five_prime_UTR	65.0%
	TGGACGGCTGTGGGAGGTAG+TGG	+	Chr3:75658971-75658990	MsG0380015829.01.T01:three_prime_UTR	65.0%
	TGGCGGCCGGATAACAGGGA+CGG	-	Chr3:75656452-75656471	None:intergenic	65.0%
!	ACAGGGACGGTGGTGGTAGG+GGG	-	Chr3:75656439-75656458	None:intergenic	65.0%
!	GGGATTGCGGTGGTGGTGAG+AGG	+	Chr3:75656886-75656905	MsG0380015829.01.T01:five_prime_UTR	65.0%
!	GGTGGTGGTAGGGGGAGAAC+AGG	-	Chr3:75656431-75656450	None:intergenic	65.0%
!!	GTGGTGGCGGCCGGATAACA+GGG	-	Chr3:75656456-75656475	None:intergenic	65.0%
	CGGCCGGATAACAGGGACGG+TGG	-	Chr3:75656449-75656468	None:intergenic	70.0%
!!	ACTGTCGATTCCGGCGGCGG+CGG	+	Chr3:75656587-75656606	MsG0380015829.01.T01:five_prime_UTR	70.0%
!!	GAAGGAGAGGTGGTGGCGGC+CGG	-	Chr3:75656465-75656484	None:intergenic	70.0%
!!	GGTGGTGGCGGCCGGATAAC+AGG	-	Chr3:75656457-75656476	None:intergenic	70.0%
!	TCCTCTTCCGCCGCCGCCGC+CGG	-	Chr3:75656600-75656619	None:intergenic	80.0%
!!	GTCGATTCCGGCGGCGGCGG+CGG	+	Chr3:75656590-75656609	MsG0380015829.01.T01:five_prime_UTR	80.0%
!	TCCGGCGGCGGCGGCGGAAG+AGG	+	Chr3:75656596-75656615	MsG0380015829.01.T01:five_prime_UTR	85.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	75655884	75659225	75655884	ID=MsG0380015829.01;Name=MsG0380015829.01
Chr3	mRNA	75655884	75659225	75655884	ID=MsG0380015829.01.T01;Parent=MsG0380015829.01;Name=MsG0380015829.01.T01;_AED=0.32;_eAED=0.32;_QI=1199\|0.5\|0.8\|1\|0.5\|0.4\|5\|410\|172
Chr3	exon	75655884	75656773	75655884	ID=MsG0380015829.01.T01:exon:24730;Parent=MsG0380015829.01.T01
Chr3	exon	75656855	75656970	75656855	ID=MsG0380015829.01.T01:exon:24731;Parent=MsG0380015829.01.T01
Chr3	exon	75657138	75657493	75657138	ID=MsG0380015829.01.T01:exon:24732;Parent=MsG0380015829.01.T01
Chr3	exon	75657639	75657862	75657639	ID=MsG0380015829.01.T01:exon:24733;Parent=MsG0380015829.01.T01
Chr3	exon	75658684	75659225	75658684	ID=MsG0380015829.01.T01:exon:24734;Parent=MsG0380015829.01.T01
Chr3	five_prime_UTR	75655884	75656773	75655884	ID=MsG0380015829.01.T01:five_prime_utr;Parent=MsG0380015829.01.T01
Chr3	five_prime_UTR	75656855	75656970	75656855	ID=MsG0380015829.01.T01:five_prime_utr;Parent=MsG0380015829.01.T01
Chr3	five_prime_UTR	75657138	75657330	75657138	ID=MsG0380015829.01.T01:five_prime_utr;Parent=MsG0380015829.01.T01
Chr3	CDS	75657331	75657493	75657331	ID=MsG0380015829.01.T01:cds;Parent=MsG0380015829.01.T01
Chr3	CDS	75657639	75657862	75657639	ID=MsG0380015829.01.T01:cds;Parent=MsG0380015829.01.T01
Chr3	CDS	75658684	75658815	75658684	ID=MsG0380015829.01.T01:cds;Parent=MsG0380015829.01.T01
Chr3	three_prime_UTR	75658816	75659225	75658816	ID=MsG0380015829.01.T01:three_prime_utr;Parent=MsG0380015829.01.T01

Gene Sequence

>MsG0380015829.01.T01

ATGCTTATCGTTCAACTTCTTGCTATTTATTCCATAGCATCGGACAAGCGACCGTTGAAGAGAACAAGCATTCGAACGGATGAAACGAGCATTCAATATGGTGGAGGCAAGCCTTCCTGTATGCACGACACAGATAGACATCCATTACATGACAATACAAATGACAGATGCATGCTAGCTCATAAATTTAATGATTTGCCTTATTTTCACATGATCTTGACCGTCCAACGAAACTGTACAGTTTGTTCGGTTGGTTTGCACAGTATACGTCATAGCAATCAAATCAGTGGCTTTCAAGGTCGACTGCTTCCTGGTAAATACAAATTCAAGATGGAAAGCTTATCAACCGTTCGAGTGGCAACGAACGCGTGCGCAGTGCTGTTAATGACAAGTTCAGTTTTGTCTTTTCTTGAGGCTCTTGAGGGTTCTGTTTCCAAGTATGAGGAGTCCATACAAGATGATCAGGATTTAAGATCTCAATCTTCTAACAATCATGGCTGTATTGATGAATCTCAGTAG

Protein sequence

>MsG0380015829.01.T01

MLIVQLLAIYSIASDKRPLKRTSIRTDETSIQYGGGKPSCMHDTDRHPLHDNTNDRCMLAHKFNDLPYFHMILTVQRNCTVCSVGLHSIRHSNQISGFQGRLLPGKYKFKMESLSTVRVATNACAVLLMTSSVLSFLEALEGSVSKYEESIQDDQDLRSQSSNNHGCIDESQ*