AlfalfaGEDB | MsG0380016008.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016008.01

KEGG: -
GO: GO:0008270
PFAM: PF12906

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016008.01.T01	XP_013461156.1	93.908	476	26	1	1	473	1	476	0	875

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016008.01.T01	A0A072VAG8	93.908	476	26	1	1	473	1	476	0.0	875

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048692.01	MsG0380016008.01	-0.823101	1.659843e-53	1.415732e-50
MsG0080048694.01	MsG0380016008.01	-0.803944	2.736730e-49	1.393375e-46
MsG0080048695.01	MsG0380016008.01	-0.802889	4.528264e-49	2.243825e-46
MsG0080048800.01	MsG0380016008.01	-0.801066	1.072788e-48	5.075619e-46
MsG0080049076.01	MsG0380016008.01	-0.829398	5.264037e-55	5.381555e-52
MsG0180000373.01	MsG0380016008.01	0.801657	8.120439e-49	3.899397e-46
MsG0180000659.01	MsG0380016008.01	0.835022	2.137133e-56	2.580859e-53
MsG0180001104.01	MsG0380016008.01	0.807372	5.219870e-50	2.902353e-47
MsG0180001234.01	MsG0380016008.01	0.804896	1.733162e-49	9.043532e-47
MsG0180001925.01	MsG0380016008.01	-0.815993	6.952212e-52	4.866689e-49
MsG0180002546.01	MsG0380016008.01	-0.811954	5.405746e-51	3.392308e-48
MsG0180004186.01	MsG0380016008.01	0.818491	1.906822e-52	1.429431e-49
MsG0180004300.01	MsG0380016008.01	0.845544	3.801322e-59	6.356458e-56
MsG0180004752.01	MsG0380016008.01	0.803463	3.444633e-49	1.732130e-46
MsG0280006420.01	MsG0380016008.01	0.837738	4.354297e-57	5.709259e-54
MsG0280006436.01	MsG0380016008.01	0.800024	1.749861e-48	8.062544e-46
MsG0280010695.01	MsG0380016008.01	-0.808535	2.953140e-50	1.692805e-47
MsG0380013890.01	MsG0380016008.01	-0.806876	6.649652e-50	3.650044e-47
MsG0380013892.01	MsG0380016008.01	-0.836894	7.160399e-57	9.148572e-54
MsG0380013940.01	MsG0380016008.01	-0.823788	1.146772e-53	9.973366e-51
MsG0380013943.01	MsG0380016008.01	-0.813156	2.951834e-51	1.912795e-48
MsG0380013945.01	MsG0380016008.01	-0.828182	1.036134e-54	1.022248e-51
MsG0380013953.01	MsG0380016008.01	-0.846442	2.166553e-59	3.729884e-56
MsG0380013954.01	MsG0380016008.01	-0.817982	2.485507e-52	1.837203e-49
MsG0380013957.01	MsG0380016008.01	-0.833715	4.548101e-56	5.280945e-53
MsG0380013966.01	MsG0380016008.01	-0.800501	1.399391e-48	6.526248e-46
MsG0380013967.01	MsG0380016008.01	-0.832526	8.988709e-56	1.007303e-52
MsG0380013971.01	MsG0380016008.01	-0.807364	5.241761e-50	2.913867e-47
MsG0380013977.01	MsG0380016008.01	-0.826762	2.270913e-54	2.149384e-51
MsG0380013986.01	MsG0380016008.01	-0.803850	2.863599e-49	1.454377e-46
MsG0380014005.01	MsG0380016008.01	-0.805563	1.256823e-49	6.670411e-47
MsG0380014006.01	MsG0380016008.01	-0.852443	4.600345e-61	9.614140e-58
MsG0380014032.01	MsG0380016008.01	-0.820366	7.124228e-53	5.625899e-50
MsG0380014033.01	MsG0380016008.01	-0.806211	9.183067e-50	4.955785e-47
MsG0380014754.01	MsG0380016008.01	0.835012	2.148909e-56	2.594407e-53
MsG0380016008.01	MsG0380016018.01	0.951930	7.190193e-110	1.703167e-104
MsG0380016008.01	MsG0380017231.01	0.831143	1.972665e-55	2.121986e-52
MsG0380016008.01	MsG0480019038.01	0.812922	3.322223e-51	2.139335e-48
MsG0380016008.01	MsG0480019588.01	0.821831	3.275622e-53	2.694688e-50
MsG0380016008.01	MsG0480020052.01	-0.808294	3.323552e-50	1.893201e-47
MsG0380016008.01	MsG0480020263.01	0.818793	1.628358e-52	1.230863e-49
MsG0380016008.01	MsG0480021553.01	0.802404	5.702028e-49	2.790792e-46
MsG0380016008.01	MsG0480023195.01	0.813619	2.334990e-51	1.532400e-48
MsG0380016008.01	MsG0480023324.01	0.801585	8.399865e-49	4.026245e-46
MsG0380016008.01	MsG0480023536.01	0.802280	6.045533e-49	2.949575e-46
MsG0380016008.01	MsG0480023541.01	0.802923	4.456134e-49	2.209936e-46
MsG0380016008.01	MsG0580024035.01	0.830899	2.264421e-55	2.418416e-52
MsG0380016008.01	MsG0580024478.01	0.828805	7.331360e-55	7.364885e-52
MsG0380016008.01	MsG0580027626.01	0.807908	4.017318e-50	2.264967e-47
MsG0380016008.01	MsG0580027641.01	0.808214	3.457150e-50	1.965180e-47
MsG0380016008.01	MsG0580028307.01	0.826117	3.234889e-54	3.006075e-51
MsG0380016008.01	MsG0580029023.01	0.802661	5.046857e-49	2.486206e-46
MsG0380016008.01	MsG0580029623.01	0.829629	4.624385e-55	4.759502e-52
MsG0380016008.01	MsG0680035842.01	0.807606	4.656809e-50	2.604995e-47
MsG0380016008.01	MsG0780037751.01	0.803643	3.160777e-49	1.596742e-46
MsG0380016008.01	MsG0780038823.01	0.809918	1.491845e-50	8.871124e-48
MsG0380016008.01	MsG0780038857.01	0.818757	1.659670e-52	1.253312e-49
MsG0380016008.01	MsG0780039598.01	0.801987	6.946978e-49	3.363996e-46
MsG0380016008.01	MsG0780041637.01	-0.803353	3.629501e-49	1.819853e-46
MsG0380016008.01	MsG0880042839.01	0.802225	6.206419e-49	3.023682e-46
MsG0380016008.01	MsG0880043921.01	0.809338	1.987632e-50	1.163910e-47
MsG0380016008.01	MsG0880043983.01	0.804373	2.228764e-49	1.147250e-46
MsG0380016008.01	MsG0880044855.01	0.819198	1.317481e-52	1.007057e-49
MsG0380016008.01	MsG0880045338.01	0.810723	1.000507e-50	6.077061e-48
MsG0380016008.01	MsG0880045341.01	0.803117	4.063010e-49	2.024928e-46
MsG0380016008.01	MsG0880046615.01	0.801284	9.681463e-49	4.605655e-46
MsG0280006884.01	MsG0380016008.01	0.822356	2.474688e-53	2.066599e-50
MsG0280007052.01	MsG0380016008.01	0.825463	4.623526e-54	4.217001e-51
MsG0280008280.01	MsG0380016008.01	0.801935	7.120837e-49	3.443620e-46
MsG0280008856.01	MsG0380016008.01	0.801869	7.347152e-49	3.547309e-46
MsG0280010173.01	MsG0380016008.01	0.814348	1.612442e-51	1.079310e-48
MsG0280010296.01	MsG0380016008.01	0.827899	1.212460e-54	1.186310e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016008.01.T01	MTR_3g081490	93.908	476	26	1	1	473	1	476	0.0	875
MsG0380016008.01.T01	MTR_3g081490	93.122	378	23	1	1	375	1	378	0.0	709
MsG0380016008.01.T01	MTR_3g081490	91.429	385	30	1	1	382	1	385	0.0	709
MsG0380016008.01.T01	MTR_4g059540	43.721	430	213	10	45	465	95	504	6.72e-101	312
MsG0380016008.01.T01	MTR_4g059540	43.733	375	186	9	45	414	95	449	2.91e-84	267
MsG0380016008.01.T01	MTR_1g064710	38.313	415	215	12	67	465	97	486	1.09e-83	267
MsG0380016008.01.T01	MTR_2g094130	40.306	392	214	9	71	456	89	466	1.20e-80	259
MsG0380016008.01.T01	MTR_2g094130	40.691	376	198	10	71	435	89	450	4.38e-78	252
MsG0380016008.01.T01	MTR_1g064710	40.000	350	173	10	67	403	97	422	7.93e-72	234
MsG0380016008.01.T01	MTR_1g064710	40.373	322	155	10	67	375	97	394	1.66e-60	203
MsG0380016008.01.T01	MTR_4g059540	44.402	259	129	5	45	303	95	338	3.53e-54	186
MsG0380016008.01.T01	MTR_2g020520	33.254	421	227	15	27	435	35	413	2.66e-53	185
MsG0380016008.01.T01	MTR_2g020520	33.017	421	228	14	27	435	34	412	6.57e-53	184
MsG0380016008.01.T01	MTR_2g020520	40.187	214	122	3	225	435	94	304	1.75e-51	177
MsG0380016008.01.T01	MTR_1g064710	38.246	285	142	9	67	341	97	357	1.34e-46	166
MsG0380016008.01.T01	MTR_2g094130	40.511	274	146	8	71	341	89	348	6.90e-45	163
MsG0380016008.01.T01	MTR_2g094130	40.511	274	146	8	71	341	89	348	7.68e-45	162
MsG0380016008.01.T01	MTR_7g075700	35.443	237	130	6	230	448	25	256	1.49e-34	130
MsG0380016008.01.T01	MTR_4g459440	57.576	99	42	0	349	447	1	99	1.92e-34	126
MsG0380016008.01.T01	MTR_7g075740	32.850	207	122	4	238	442	41	232	8.42e-32	122
MsG0380016008.01.T01	MTR_7g065920	41.304	92	41	3	214	294	80	169	4.06e-12	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016008.01.T01	AT5G60580	47.409	386	174	10	55	433	84	447	3.10e-99	306
MsG0380016008.01.T01	AT5G60580	47.409	386	174	10	55	433	84	447	3.10e-99	306
MsG0380016008.01.T01	AT5G60580	46.565	393	174	11	55	433	84	454	2.25e-96	300
MsG0380016008.01.T01	AT5G60580	46.565	393	174	11	55	433	84	454	2.25e-96	300
MsG0380016008.01.T01	AT3G09760	39.237	367	194	9	76	435	115	459	8.14e-78	251
MsG0380016008.01.T01	AT5G03180	36.269	386	203	13	76	448	97	452	1.10e-71	234
MsG0380016008.01.T01	AT5G03180	36.856	388	202	14	76	448	62	421	1.26e-71	233
MsG0380016008.01.T01	AT5G03180	36.082	388	205	13	76	448	97	456	4.70e-71	233
MsG0380016008.01.T01	AT3G06330	34.559	408	222	11	33	435	48	415	9.16e-56	191
MsG0380016008.01.T01	AT3G06330	40.590	271	143	5	171	437	50	306	7.27e-55	186
MsG0380016008.01.T01	AT3G06330	43.805	226	121	3	216	437	25	248	4.15e-54	182
MsG0380016008.01.T01	AT5G03180	36.000	325	169	12	76	385	97	397	4.07e-50	176
MsG0380016008.01.T01	AT5G03180	36.697	327	168	13	76	385	97	401	9.12e-50	175
MsG0380016008.01.T01	AT5G18760	33.333	378	206	10	65	432	56	397	7.31e-44	159
MsG0380016008.01.T01	AT3G06330	33.043	345	186	11	33	372	48	352	3.30e-31	124
MsG0380016008.01.T01	AT5G18760	34.979	243	126	8	65	307	56	266	1.72e-25	107
MsG0380016008.01.T01	AT2G37950	46.774	62	30	2	234	294	80	139	2.22e-12	66.6
MsG0380016008.01.T01	AT5G01070	44.615	65	30	2	234	294	74	136	4.94e-11	62.8

Find 108 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTCAACATTCACTGGATT+TGG	0.151106	3:+77857345	MsG0380016008.01.T01:CDS
CTACAAACTGCTTCTTCTTC+TGG	0.229948	3:-77854835	None:intergenic
TAAGACCTGCAACAGATTCT+AGG	0.241872	3:+77854300	MsG0380016008.01.T01:CDS
GTGTACCAGGTTTCAGATTT+GGG	0.251435	3:+77856439	MsG0380016008.01.T01:intron
AGTGTACCAGGTTTCAGATT+TGG	0.280953	3:+77856438	MsG0380016008.01.T01:intron
TACTTTCTGATAGGAGCTTT+AGG	0.312686	3:+77853871	MsG0380016008.01.T01:CDS
AGATGAAAGACTAGGCCTTC+TGG	0.314784	3:-77853706	None:intergenic
TTTCAACATTCACTGGATTT+GGG	0.323066	3:+77857346	MsG0380016008.01.T01:CDS
GTTACTCCAATTGCTAATTC+AGG	0.332975	3:+77854056	MsG0380016008.01.T01:CDS
TTCTTCTCTTCTTCATCATC+AGG	0.347218	3:+77853070	MsG0380016008.01.T01:CDS
CCCATCTGATATATTCCATT+AGG	0.353626	3:-77857392	None:intergenic
GCACTTTCTAGTGTCCTTGT+TGG	0.354525	3:-77853738	None:intergenic
AGAGAGCAGTAGCTAATTAC+AGG	0.356068	3:+77855085	MsG0380016008.01.T01:CDS
CAGCATGAATTCTCTCCTAA+TGG	0.357709	3:+77857377	MsG0380016008.01.T01:CDS
TTAGCGGCTTTGACATTAAC+CGG	0.367120	3:-77854275	None:intergenic
CAGAAGAAGAAGCAGTTTGT+AGG	0.369236	3:+77854836	MsG0380016008.01.T01:CDS
ATCATCAGATAATGGTCCTT+TGG	0.385393	3:+77853950	MsG0380016008.01.T01:CDS
ATATCAGATGGGAAACAAAT+AGG	0.392592	3:+77857403	MsG0380016008.01.T01:CDS
GATACTTTATCATCAGATAA+TGG	0.405699	3:+77853942	MsG0380016008.01.T01:CDS
TTTGGTGGAGCTTGCGGAAG+GGG	0.407562	3:+77854864	MsG0380016008.01.T01:CDS
CTAGTCCTCCGACTGTTGTT+CGG	0.409328	3:+77855040	MsG0380016008.01.T01:CDS
GTTCTTCTTTCAACATTCAC+TGG	0.409765	3:+77857339	MsG0380016008.01.T01:CDS
AGAGAAGAATCTGACATCAT+TGG	0.413265	3:-77853056	None:intergenic
AGCAGTTTGTAGGATTTGTT+TGG	0.425476	3:+77854846	MsG0380016008.01.T01:CDS
CAGTGAGCAGGAGTTACATA+TGG	0.426184	3:+77857156	MsG0380016008.01.T01:intron
ATAATAAGCCTTCAACTTCA+AGG	0.427266	3:+77853973	MsG0380016008.01.T01:CDS
ATCTATCATTGCTTCAACCA+TGG	0.437805	3:+77856516	MsG0380016008.01.T01:CDS
TCTGCACCTGAATTAGCAAT+TGG	0.438182	3:-77854062	None:intergenic
GACTGGATCGATGACCGGTC+CGG	0.445176	3:-77856307	None:intergenic
AGACGCCTAGAATCTGTTGC+AGG	0.448575	3:-77854305	None:intergenic
ACTTTGGTAGAATGTGGCCT+TGG	0.449976	3:-77853828	None:intergenic
TGCAACAGATTCTAGGCGTC+TGG	0.456493	3:+77854307	MsG0380016008.01.T01:CDS
AATAGAATATATGCGCAAAC+AGG	0.461916	3:-77857211	None:intergenic
GAATGAGACCTTGAAGTTGA+AGG	0.470115	3:-77853981	None:intergenic
AGAGTGTTACTGGAAGATTC+CGG	0.479931	3:-77855008	None:intergenic
GAATTAGCAATTGGAGTAAC+CGG	0.483095	3:-77854053	None:intergenic
TTGGTAGAATGTGGCCTTGG+TGG	0.484999	3:-77853825	None:intergenic
ACAGGATGACAAATGCGAAC+TGG	0.485665	3:-77857193	None:intergenic
GCAGGAGAAAGGCAATGAAA+TGG	0.491496	3:-77856476	None:intergenic
TCTATCATTGCTTCAACCAT+GGG	0.492217	3:+77856517	MsG0380016008.01.T01:CDS
TTTCATAGAGGACTTGACTT+TGG	0.494952	3:-77853844	None:intergenic
CAGTGACTCAGTACTTTGAC+TGG	0.496255	3:-77856324	None:intergenic
TAAAGCGGCGCATTCGTTAC+CGG	0.496773	3:+77854034	MsG0380016008.01.T01:CDS
CCTTGGTGGCAGTCCTCTAG+TGG	0.497730	3:-77853811	None:intergenic
TGTTTGGTGGAGCTTGCGGA+AGG	0.499210	3:+77854862	MsG0380016008.01.T01:CDS
GGCAGTCCTCTAGTGGAACC+TGG	0.502946	3:-77853804	None:intergenic
TGTTGCAGGTCTTAAATTAG+CGG	0.503069	3:-77854291	None:intergenic
CTCTTGCATTGAATCACTGC+GGG	0.504151	3:-77854381	None:intergenic
TTCTTCTTCTGGAATATCCT+CGG	0.504900	3:-77854824	None:intergenic
GAAACACCATCAGTAGTTGC+TGG	0.505889	3:-77854356	None:intergenic
ACCACTTTACTGCACAGTCT+TGG	0.510134	3:-77854939	None:intergenic
TCCTAATGGAATATATCAGA+TGG	0.511034	3:+77857391	MsG0380016008.01.T01:CDS
CAGTCAAAGTACTGAGTCAC+TGG	0.511606	3:+77856325	MsG0380016008.01.T01:CDS
AGTGATTCAATGCAAGAGAT+TGG	0.513825	3:+77854386	MsG0380016008.01.T01:CDS
GTGGTATCAACTACAGTCAT+TGG	0.514336	3:-77857524	None:intergenic
AACGTATGCCGAACAACAGT+CGG	0.522051	3:-77855048	None:intergenic
GAGTCACTGGTCAAACCAAT+GGG	0.525531	3:+77856338	MsG0380016008.01.T01:CDS
ACCAAGACTGTGCAGTAAAG+TGG	0.528389	3:+77854938	MsG0380016008.01.T01:CDS
GTAAAGTGGTTTAGTATCAA+AGG	0.531954	3:+77854952	MsG0380016008.01.T01:CDS
AGACCTAAAATGCAGGAGAA+AGG	0.534858	3:-77856487	None:intergenic
AGTTTGTAGGATTTGTTTGG+TGG	0.537738	3:+77854849	MsG0380016008.01.T01:CDS
CCATCAGTAGTTGCTGGCTG+TGG	0.539566	3:-77854350	None:intergenic
ATGTCTGCAAGCAGGATGTC+CGG	0.544697	3:+77854989	MsG0380016008.01.T01:CDS
TTGGTGGAGCTTGCGGAAGG+GGG	0.544999	3:+77854865	MsG0380016008.01.T01:CDS
TGAAAGGAGACCTAAAATGC+AGG	0.547003	3:-77856494	None:intergenic
GTTTGGTGGAGCTTGCGGAA+GGG	0.550368	3:+77854863	MsG0380016008.01.T01:CDS
TGAGTCACTGGTCAAACCAA+TGG	0.558337	3:+77856337	MsG0380016008.01.T01:CDS
TGCGCCGCTTTACTCGATGA+AGG	0.559142	3:-77854023	None:intergenic
AATGAAATGGCGAGAGCACG+TGG	0.562922	3:-77856463	None:intergenic
ACTTTGACTGGATCGATGAC+CGG	0.564141	3:-77856312	None:intergenic
GGTCCTACATTATCGAGTCC+AGG	0.567450	3:+77853786	MsG0380016008.01.T01:CDS
CTTGTAGCTTAATGTGAGTG+CGG	0.568172	3:+77857308	MsG0380016008.01.T01:intron
TGCATCCTTTGCAGTTGATG+TGG	0.568430	3:-77857489	None:intergenic
TGTTGATTTCACAGTCCAGA+AGG	0.569380	3:+77853691	MsG0380016008.01.T01:intron
GTTGAAGGCTTATTATCCAA+AGG	0.569830	3:-77853966	None:intergenic
GATTTGTTTGGTGGAGCTTG+CGG	0.571135	3:+77854858	MsG0380016008.01.T01:CDS
ATGACTGTAGTTGATACCAC+TGG	0.573119	3:+77857527	MsG0380016008.01.T01:exon
TAAATATATCTGAAGAGTGA+AGG	0.578970	3:+77857732	MsG0380016008.01.T01:three_prime_UTR
TTGAAGCAATGATAGATGAA+AGG	0.581811	3:-77856510	None:intergenic
GAATCTATCTTTGATGGAGA+AGG	0.583691	3:+77853004	None:intergenic
AGTGAGCAGGAGTTACATAT+GGG	0.587689	3:+77857157	MsG0380016008.01.T01:intron
CCTAATGGAATATATCAGAT+GGG	0.587851	3:+77857392	MsG0380016008.01.T01:CDS
AGGATGGACTGCAGTTGCAA+AGG	0.592249	3:+77854898	MsG0380016008.01.T01:CDS
GACTTGACTTTGGTAGAATG+TGG	0.592551	3:-77853834	None:intergenic
TCGAGTCCAGGTTCCACTAG+AGG	0.595588	3:+77853798	MsG0380016008.01.T01:CDS
GACATGTGATGTCTGCAAGC+AGG	0.596981	3:+77854981	MsG0380016008.01.T01:CDS
AGTCATTGAAGATGCTTCCG+AGG	0.600332	3:+77854807	MsG0380016008.01.T01:intron
TCAGGTGCAGAGAATGTACA+TGG	0.600495	3:+77854074	MsG0380016008.01.T01:CDS
CCACTAGAGGACTGCCACCA+AGG	0.602093	3:+77853811	MsG0380016008.01.T01:CDS
CCACAGCCAGCAACTACTGA+TGG	0.604437	3:+77854350	MsG0380016008.01.T01:CDS
GAACCTGGACTCGATAATGT+AGG	0.604684	3:-77853789	None:intergenic
TGTACATGGAAGACATGTAG+AGG	0.604726	3:+77854088	MsG0380016008.01.T01:CDS
GTTCCCTTCATCGAGTAAAG+CGG	0.605134	3:+77854019	MsG0380016008.01.T01:CDS
AGAATGCAGACATATACTCT+AGG	0.607758	3:+77857693	MsG0380016008.01.T01:three_prime_UTR
AAGATTGGCATTCTAGAGTG+TGG	0.608275	3:+77857625	MsG0380016008.01.T01:three_prime_UTR
GACAACCACATCAACTGCAA+AGG	0.622140	3:+77857484	MsG0380016008.01.T01:CDS
GCGCCGCTTTACTCGATGAA+GGG	0.624936	3:-77854022	None:intergenic
TCATCTTCTACTAAGACAGA+TGG	0.633654	3:+77853765	MsG0380016008.01.T01:CDS
CTATCTTTGATGGAGAAGGA+AGG	0.637073	3:+77853008	None:intergenic
CATCTCTACAAATACCAACA+AGG	0.638179	3:+77853724	MsG0380016008.01.T01:CDS
ATTTGTAGAGATGAAAGACT+AGG	0.650609	3:-77853714	None:intergenic
GTTTAAAATACTACTGCACA+TGG	0.670993	3:-77857667	None:intergenic
CATGGAAGACATGTAGAGGG+TGG	0.692052	3:+77854092	MsG0380016008.01.T01:CDS
TAAAATACTACTGCACATGG+TGG	0.700579	3:-77857664	None:intergenic
GTACATGGAAGACATGTAGA+GGG	0.703736	3:+77854089	MsG0380016008.01.T01:CDS
TCTCTTGCATTGAATCACTG+CGG	0.705550	3:-77854382	None:intergenic
GTATGCCGAACAACAGTCGG+AGG	0.720782	3:-77855045	None:intergenic
ATGAAATGGCGAGAGCACGT+GGG	0.733732	3:-77856462	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATCTTTATAGATATTAAAT+AGG	+	Chr3:77854580-77854599	MsG0380016008.01.T01:intron	10.0%
!!!	AATTTATAATTTTTAGCTTT+TGG	+	Chr3:77853228-77853247	MsG0380016008.01.T01:intron	10.0%
!!!	ATATTTTTTCATTTTCTTTT+TGG	+	Chr3:77856598-77856617	MsG0380016008.01.T01:intron	10.0%
!!!	ATTTATAATTTTTAGCTTTT+GGG	+	Chr3:77853229-77853248	MsG0380016008.01.T01:intron	10.0%
!!!	TATTTTTTCATTTTCTTTTT+GGG	+	Chr3:77856599-77856618	MsG0380016008.01.T01:intron	10.0%
!!	ATATTTGAAAATTAATGAGT+TGG	-	Chr3:77855658-77855677	None:intergenic	15.0%
!!	TATATTGGAGAAAATAAAAA+AGG	-	Chr3:77853269-77853288	None:intergenic	15.0%
!!	TATTTGAACAATATTCATAT+GGG	-	Chr3:77856648-77856667	None:intergenic	15.0%
!!	TTATTTGAACAATATTCATA+TGG	-	Chr3:77856649-77856668	None:intergenic	15.0%
!!!	TAAATAACATGTTTTTTTGT+TGG	+	Chr3:77857133-77857152	MsG0380016008.01.T01:intron	15.0%
!!!	TTTCTCCAATATATTTTTTT+TGG	+	Chr3:77853276-77853295	MsG0380016008.01.T01:intron	15.0%
!!!	TTTTATCATAAACCATATTT+CGG	+	Chr3:77855631-77855650	MsG0380016008.01.T01:intron	15.0%
!!	AAAAACTAGATTGCTAAAAA+AGG	-	Chr3:77853565-77853584	None:intergenic	20.0%
!!	AAATACATCAAACTCAAATT+TGG	-	Chr3:77853633-77853652	None:intergenic	20.0%
!!	AAATTTGGTACATTAAAATG+TGG	-	Chr3:77853618-77853637	None:intergenic	20.0%
!!	AATGACACAAAAATATCTAA+TGG	-	Chr3:77853476-77853495	None:intergenic	20.0%
!!	AGTGACATAAAAATATCTAA+TGG	-	Chr3:77853593-77853612	None:intergenic	20.0%
!!	ATCTCTTCATAAATATTCAT+AGG	-	Chr3:77854615-77854634	None:intergenic	20.0%
!!	ATGTTAAAAACAATGAAACA+CGG	-	Chr3:77856957-77856976	None:intergenic	20.0%
!!	ATTTGAACAATATTCATATG+GGG	-	Chr3:77856647-77856666	None:intergenic	20.0%
!!	CACAACCAAAAAAAATATAT+TGG	-	Chr3:77853284-77853303	None:intergenic	20.0%
!!	CTAATTATAATATACTCTAC+AGG	+	Chr3:77856169-77856188	MsG0380016008.01.T01:intron	20.0%
!!	CTATAAAGATAAAAAGATAG+AGG	-	Chr3:77854571-77854590	None:intergenic	20.0%
!!	GAGTATATTATAATTAGAGA+AGG	-	Chr3:77856166-77856185	None:intergenic	20.0%
!!	TAAAATGATCAAACATAGAT+CGG	-	Chr3:77856275-77856294	None:intergenic	20.0%
!!	TCTCTTCATAAATATTCATA+GGG	-	Chr3:77854614-77854633	None:intergenic	20.0%
!!	TGAAAAATTTACTTTCTGAT+AGG	+	Chr3:77853862-77853881	MsG0380016008.01.T01:CDS	20.0%
!!	TTATAGTGAAGATTTCAAAA+GGG	-	Chr3:77854458-77854477	None:intergenic	20.0%
!!	TTCTAGATAATCTTGTAATT+TGG	-	Chr3:77855231-77855250	None:intergenic	20.0%
!!!	AGAAAGTAAATTTTTCATAG+AGG	-	Chr3:77853859-77853878	None:intergenic	20.0%
!!!	ATTATTTGTTGATTAAGATG+TGG	-	Chr3:77853501-77853520	None:intergenic	20.0%
!!!	ATTTTCTATGATACTAAGAT+TGG	+	Chr3:77857610-77857629	MsG0380016008.01.T01:three_prime_UTR	20.0%
!!!	ATTTTTGTATTTGTACAAGA+TGG	+	Chr3:77856390-77856409	MsG0380016008.01.T01:intron	20.0%
!!!	GATTTTTCTTTAGATCAAAT+GGG	+	Chr3:77853167-77853186	MsG0380016008.01.T01:intron	20.0%
!!!	GCGAAAATAATAAAAAGTAT+TGG	-	Chr3:77855270-77855289	None:intergenic	20.0%
!!!	TGATTTTTCTTTAGATCAAA+TGG	+	Chr3:77853166-77853185	MsG0380016008.01.T01:intron	20.0%
!!!	TTATGATTTTGTTTCAGATT+AGG	-	Chr3:77856729-77856748	None:intergenic	20.0%
!!!	TTTTACTAGGCAAATATATT+AGG	+	Chr3:77855826-77855845	MsG0380016008.01.T01:intron	20.0%
!	AAGGTTAATCTGTATGTAAA+TGG	+	Chr3:77855453-77855472	MsG0380016008.01.T01:intron	25.0%
!	AGAATGGAACAATTATTTGT+CGG	-	Chr3:77853417-77853436	None:intergenic	25.0%
!	ATACAACACAATCTACTATT+TGG	-	Chr3:77856001-77856020	None:intergenic	25.0%
!	GACTTATTCATAAAACATGA+TGG	-	Chr3:77857262-77857281	None:intergenic	25.0%
!	GATACTTTATCATCAGATAA+TGG	+	Chr3:77853942-77853961	MsG0380016008.01.T01:CDS	25.0%
!	GTTATAGTGAAGATTTCAAA+AGG	-	Chr3:77854459-77854478	None:intergenic	25.0%
!	TAAATATATCTGAAGAGTGA+AGG	+	Chr3:77857732-77857751	MsG0380016008.01.T01:three_prime_UTR	25.0%
!	TAACAAATACTAACTTGAGA+TGG	-	Chr3:77855901-77855920	None:intergenic	25.0%
!	TATAAATGTGACAACTTACT+AGG	+	Chr3:77855780-77855799	MsG0380016008.01.T01:intron	25.0%
!	TCTCTTTCAATAATAGTTTC+AGG	-	Chr3:77856051-77856070	None:intergenic	25.0%
!	TGGTAAATCTTCATGATATA+TGG	+	Chr3:77854406-77854425	MsG0380016008.01.T01:intron	25.0%
!	TGGTTTATGATAAAACATCA+TGG	-	Chr3:77855626-77855645	None:intergenic	25.0%
!	TTGAATGTAATCACATTCAT+TGG	-	Chr3:77856882-77856901	None:intergenic	25.0%
!	TTTAGCAAGAATTGGAATAA+AGG	+	Chr3:77856798-77856817	MsG0380016008.01.T01:intron	25.0%
!	TTTCAAAGAAAGAAGCAAAA+GGG	-	Chr3:77853111-77853130	None:intergenic	25.0%
!!	AATTCTGTAATAACCTTTTC+TGG	-	Chr3:77855545-77855564	None:intergenic	25.0%
!!	TCTCAGTTTCTTTAGTTTAT+AGG	-	Chr3:77855970-77855989	None:intergenic	25.0%
!!	TTTAGAGCGTTATTTAAGAA+AGG	-	Chr3:77855928-77855947	None:intergenic	25.0%
!!	TTTTCAAAGAAAGAAGCAAA+AGG	-	Chr3:77853112-77853131	None:intergenic	25.0%
!!!	AAACTATCACAGAAAGTATT+AGG	-	Chr3:77855683-77855702	None:intergenic	25.0%
!!!	ACCAGTTTTTCAAAACTATA+AGG	+	Chr3:77857555-77857574	MsG0380016008.01.T01:three_prime_UTR	25.0%
!!!	AGAATTTGCTCTTTGAAATT+TGG	+	Chr3:77856761-77856780	MsG0380016008.01.T01:intron	25.0%
!!!	ATAATAAAAAGTATTGGTCC+TGG	-	Chr3:77855264-77855283	None:intergenic	25.0%
!!!	CATTTTAGTGTTTTCAAAAC+CGG	+	Chr3:77856288-77856307	MsG0380016008.01.T01:intron	25.0%
!!!	CCAGTTTTTCAAAACTATAA+GGG	+	Chr3:77857556-77857575	MsG0380016008.01.T01:three_prime_UTR	25.0%
!!!	GAATTTGCTCTTTGAAATTT+GGG	+	Chr3:77856762-77856781	MsG0380016008.01.T01:intron	25.0%
!!!	TTCATTGTTTTTAACATGAG+TGG	+	Chr3:77856960-77856979	MsG0380016008.01.T01:intron	25.0%
	AAGCATAACAAGAACATTGT+AGG	-	Chr3:77855190-77855209	None:intergenic	30.0%
	AATAGAATATATGCGCAAAC+AGG	-	Chr3:77857214-77857233	None:intergenic	30.0%
	AATCATGCTACATAAGCAAA+AGG	-	Chr3:77853151-77853170	None:intergenic	30.0%
	ACTTAAATCATAGCCAAACT+TGG	-	Chr3:77853389-77853408	None:intergenic	30.0%
	AGTAGAAGAGTTTAATGAAC+AGG	-	Chr3:77857021-77857040	None:intergenic	30.0%
	AGTGGATAATGATCTTACTA+TGG	-	Chr3:77857237-77857256	None:intergenic	30.0%
	ATAATAAGCCTTCAACTTCA+AGG	+	Chr3:77853973-77853992	MsG0380016008.01.T01:CDS	30.0%
	ATAATATACTCTACAGGATC+TGG	+	Chr3:77856175-77856194	MsG0380016008.01.T01:intron	30.0%
	ATATCAGATGGGAAACAAAT+AGG	+	Chr3:77857403-77857422	MsG0380016008.01.T01:CDS	30.0%
	ATCATGCTACATAAGCAAAA+GGG	-	Chr3:77853150-77853169	None:intergenic	30.0%
	ATCTTCAAATAAGCTTGTCA+TGG	-	Chr3:77854655-77854674	None:intergenic	30.0%
	ATTTGTAGAGATGAAAGACT+AGG	-	Chr3:77853717-77853736	None:intergenic	30.0%
	CAACGATTGTCAAATTGTAT+CGG	+	Chr3:77856842-77856861	MsG0380016008.01.T01:intron	30.0%
	CCTAATGGAATATATCAGAT+GGG	+	Chr3:77857392-77857411	MsG0380016008.01.T01:CDS	30.0%
	CTAGGTAATTATCATGTCTA+TGG	-	Chr3:77857056-77857075	None:intergenic	30.0%
	CTTAAATCATAGCCAAACTT+GGG	-	Chr3:77853388-77853407	None:intergenic	30.0%
	GATTATTGCAACAAGTTACT+AGG	-	Chr3:77857074-77857093	None:intergenic	30.0%
	GATTGTGTTGTATTTCTCTT+TGG	+	Chr3:77856008-77856027	MsG0380016008.01.T01:intron	30.0%
	GTAAAGTGGTTTAGTATCAA+AGG	+	Chr3:77854952-77854971	MsG0380016008.01.T01:CDS	30.0%
	TAAGGGAACTAAAGTTACTT+TGG	-	Chr3:77856575-77856594	None:intergenic	30.0%
	TATAATTAGAGAAGGCAGTT+GGG	-	Chr3:77856158-77856177	None:intergenic	30.0%
	TCCTAATGGAATATATCAGA+TGG	+	Chr3:77857391-77857410	MsG0380016008.01.T01:CDS	30.0%
	TCTAATATGTAAGTTTGACG+AGG	-	Chr3:77855161-77855180	None:intergenic	30.0%
	TTATAATTAGAGAAGGCAGT+TGG	-	Chr3:77856159-77856178	None:intergenic	30.0%
	TTATATCATCTTCTACCCTA+TGG	-	Chr3:77853209-77853228	None:intergenic	30.0%
	TTATGCTGTTCTCATAGTAA+TGG	+	Chr3:77854134-77854153	MsG0380016008.01.T01:intron	30.0%
	TTCAAAGAAAGAAGCAAAAG+GGG	-	Chr3:77853110-77853129	None:intergenic	30.0%
	TTCGCTTTGCTTTGATTATA+AGG	+	Chr3:77855285-77855304	MsG0380016008.01.T01:intron	30.0%
	TTGAAGCAATGATAGATGAA+AGG	-	Chr3:77856513-77856532	None:intergenic	30.0%
	TTTCAACATTCACTGGATTT+GGG	+	Chr3:77857346-77857365	MsG0380016008.01.T01:CDS	30.0%
!	ACTACCATTCAACGATTTTA+GGG	-	Chr3:77856699-77856718	None:intergenic	30.0%
!	ATCTAGAACATTTAAGTTCC+AGG	+	Chr3:77855243-77855262	MsG0380016008.01.T01:intron	30.0%
!	CTTTCTGTGATAGTTTTTCT+AGG	+	Chr3:77855687-77855706	MsG0380016008.01.T01:intron	30.0%
!	GTTTAAAATACTACTGCACA+TGG	-	Chr3:77857670-77857689	None:intergenic	30.0%
!	TACTACCATTCAACGATTTT+AGG	-	Chr3:77856700-77856719	None:intergenic	30.0%
!	TCATAAAACATGATGGAAAG+TGG	-	Chr3:77857255-77857274	None:intergenic	30.0%
!	TGAAATTTGGGATTTACCAA+TGG	+	Chr3:77856774-77856793	MsG0380016008.01.T01:intron	30.0%
!	TTCTTGTTATGCTTACTTGT+TGG	+	Chr3:77855196-77855215	MsG0380016008.01.T01:intron	30.0%
!	TTTTAGACATGTGCTAGAAA+TGG	+	Chr3:77853651-77853670	MsG0380016008.01.T01:intron	30.0%
!!	TTCCATTCTAAAATCGAACT+CGG	+	Chr3:77853428-77853447	MsG0380016008.01.T01:intron	30.0%
!!!	CATGGTGGAATCAAATTTTT+TGG	-	Chr3:77857652-77857671	None:intergenic	30.0%
!!!	CCCTTATAGTTTTGAAAAAC+TGG	-	Chr3:77857559-77857578	None:intergenic	30.0%
!!!	GAAATTTTCAAGAGTGTTAC+TGG	-	Chr3:77855021-77855040	None:intergenic	30.0%
	AAATGTGTGTCTATGTATGC+GGG	+	Chr3:77855518-77855537	MsG0380016008.01.T01:intron	35.0%
	AAGTGCAAATGTAATTGCGA+TGG	-	Chr3:77854700-77854719	None:intergenic	35.0%
	AGAAGAGTTTAATGAACAGG+AGG	-	Chr3:77857018-77857037	None:intergenic	35.0%
	AGAATGCAGACATATACTCT+AGG	+	Chr3:77857693-77857712	MsG0380016008.01.T01:three_prime_UTR	35.0%
	AGAGAAATCGCTCAAAGATA+TGG	+	Chr3:77855398-77855417	MsG0380016008.01.T01:intron	35.0%
	AGAGAAGAATCTGACATCAT+TGG	-	Chr3:77853059-77853078	None:intergenic	35.0%
	AGTGATTCAATGCAAGAGAT+TGG	+	Chr3:77854386-77854405	MsG0380016008.01.T01:CDS	35.0%
	AGTGCAAATGTAATTGCGAT+GGG	-	Chr3:77854699-77854718	None:intergenic	35.0%
	ATAATTAGAGAAGGCAGTTG+GGG	-	Chr3:77856157-77856176	None:intergenic	35.0%
	ATCTATCATTGCTTCAACCA+TGG	+	Chr3:77856516-77856535	MsG0380016008.01.T01:CDS	35.0%
	ATCTGTATGTAAATGGCTGT+TGG	+	Chr3:77855460-77855479	MsG0380016008.01.T01:intron	35.0%
	ATCTTGTAATTTGGACCACA+AGG	-	Chr3:77855222-77855241	None:intergenic	35.0%
	ATTCACTGAACGAGTCAAAA+AGG	+	Chr3:77855434-77855453	MsG0380016008.01.T01:intron	35.0%
	CAATATTCATATGGGGTTCA+TGG	-	Chr3:77856640-77856659	None:intergenic	35.0%
	CATAACTCCAAACCAAACTT+AGG	-	Chr3:77853340-77853359	None:intergenic	35.0%
	CATCTCTACAAATACCAACA+AGG	+	Chr3:77853724-77853743	MsG0380016008.01.T01:CDS	35.0%
	CCAATTCTTGCTAAATCCAT+TGG	-	Chr3:77856793-77856812	None:intergenic	35.0%
	CCCATCTGATATATTCCATT+AGG	-	Chr3:77857395-77857414	None:intergenic	35.0%
	CTTCAATGACTGAAACCAAA+CGG	-	Chr3:77854798-77854817	None:intergenic	35.0%
	CTTTCAACATTCACTGGATT+TGG	+	Chr3:77857345-77857364	MsG0380016008.01.T01:CDS	35.0%
	CTTTGCTTTGATTATAAGGC+TGG	+	Chr3:77855289-77855308	MsG0380016008.01.T01:intron	35.0%
	GAAATGTGTGTCTATGTATG+CGG	+	Chr3:77855517-77855536	MsG0380016008.01.T01:intron	35.0%
	GAATTAGCAATTGGAGTAAC+CGG	-	Chr3:77854056-77854075	None:intergenic	35.0%
	GTTACTCCAATTGCTAATTC+AGG	+	Chr3:77854056-77854075	MsG0380016008.01.T01:CDS	35.0%
	GTTCATGGCCAAAAACTAAT+CGG	-	Chr3:77856625-77856644	None:intergenic	35.0%
	GTTCTTCTTTCAACATTCAC+TGG	+	Chr3:77857339-77857358	MsG0380016008.01.T01:CDS	35.0%
	GTTGAAGGCTTATTATCCAA+AGG	-	Chr3:77853969-77853988	None:intergenic	35.0%
	TAAAATACTACTGCACATGG+TGG	-	Chr3:77857667-77857686	None:intergenic	35.0%
	TACTTTCTGATAGGAGCTTT+AGG	+	Chr3:77853871-77853890	MsG0380016008.01.T01:CDS	35.0%
	TCATCTTCTACTAAGACAGA+TGG	+	Chr3:77853765-77853784	MsG0380016008.01.T01:CDS	35.0%
	TCGTAATCCTAAGTTTGGTT+TGG	+	Chr3:77853330-77853349	MsG0380016008.01.T01:intron	35.0%
	TCTATCATTGCTTCAACCAT+GGG	+	Chr3:77856517-77856536	MsG0380016008.01.T01:CDS	35.0%
	TCTGTATGTAAATGGCTGTT+GGG	+	Chr3:77855461-77855480	MsG0380016008.01.T01:intron	35.0%
	TGTTGCAGGTCTTAAATTAG+CGG	-	Chr3:77854294-77854313	None:intergenic	35.0%
	TTATACAACTAGTGACCCAT+TGG	-	Chr3:77856356-77856375	None:intergenic	35.0%
	TTCTTCTCTTCTTCATCATC+AGG	+	Chr3:77853070-77853089	MsG0380016008.01.T01:CDS	35.0%
	TTGAGCGATTTCTCTTCATT+AGG	-	Chr3:77855393-77855412	None:intergenic	35.0%
	TTTCATAGAGGACTTGACTT+TGG	-	Chr3:77853847-77853866	None:intergenic	35.0%
!	AAAGTTACTTTGGCATGCTA+AGG	-	Chr3:77856565-77856584	None:intergenic	35.0%
!	AAGTTACTTTGGCATGCTAA+GGG	-	Chr3:77856564-77856583	None:intergenic	35.0%
!	AGCAGTTTGTAGGATTTGTT+TGG	+	Chr3:77854846-77854865	MsG0380016008.01.T01:CDS	35.0%
!	AGTTTGTAGGATTTGTTTGG+TGG	+	Chr3:77854849-77854868	MsG0380016008.01.T01:CDS	35.0%
!	ATCATCAGATAATGGTCCTT+TGG	+	Chr3:77853950-77853969	MsG0380016008.01.T01:CDS	35.0%
!	CCAATGGATTTAGCAAGAAT+TGG	+	Chr3:77856790-77856809	MsG0380016008.01.T01:intron	35.0%
!	CTACCATTCAACGATTTTAG+GGG	-	Chr3:77856698-77856717	None:intergenic	35.0%
!	TAATGAGTTGGACCGAAATA+TGG	-	Chr3:77855646-77855665	None:intergenic	35.0%
!	TAGATCAAATGGGTTTCCAT+TGG	+	Chr3:77853177-77853196	MsG0380016008.01.T01:intron	35.0%
!	TGCAATAATCACTTGTTAGC+TGG	+	Chr3:77857084-77857103	MsG0380016008.01.T01:intron	35.0%
!!	AACCGAGTTCGATTTTAGAA+TGG	-	Chr3:77853433-77853452	None:intergenic	35.0%
!!	TCAAAGATTTCTAGTGTACC+AGG	+	Chr3:77856426-77856445	MsG0380016008.01.T01:intron	35.0%
!!	TTCCATTGGTTTGAACCATA+GGG	+	Chr3:77853191-77853210	MsG0380016008.01.T01:intron	35.0%
!!	TTCTTCTTCTGGAATATCCT+CGG	-	Chr3:77854827-77854846	None:intergenic	35.0%
!!	TTTCCATTGGTTTGAACCAT+AGG	+	Chr3:77853190-77853209	MsG0380016008.01.T01:intron	35.0%
!!!	GACTACATTTTTTTCCCACA+TGG	-	Chr3:77856079-77856098	None:intergenic	35.0%
!!!	TTTTTGGGCCGATTAGTTTT+TGG	+	Chr3:77856614-77856633	MsG0380016008.01.T01:intron	35.0%
	ACAACTTACTAGGCAATCAC+TGG	+	Chr3:77855790-77855809	MsG0380016008.01.T01:intron	40.0%
	ACGTAATTATGCGATGTTGG+AGG	-	Chr3:77855743-77855762	None:intergenic	40.0%
	AGACCTAAAATGCAGGAGAA+AGG	-	Chr3:77856490-77856509	None:intergenic	40.0%
	AGAGAGCAGTAGCTAATTAC+AGG	+	Chr3:77855085-77855104	MsG0380016008.01.T01:CDS	40.0%
	AGTGAGCAGGAGTTACATAT+GGG	+	Chr3:77857157-77857176	MsG0380016008.01.T01:intron	40.0%
	AGTGTACCAGGTTTCAGATT+TGG	+	Chr3:77856438-77856457	MsG0380016008.01.T01:intron	40.0%
	ATCGTTGTAAAGTGAAACGC+AGG	-	Chr3:77856829-77856848	None:intergenic	40.0%
	ATGCTAACCAAGACAAGTAC+TGG	-	Chr3:77856210-77856229	None:intergenic	40.0%
	CAAAGATATGGACGAAAACC+TGG	+	Chr3:77855410-77855429	MsG0380016008.01.T01:intron	40.0%
	CAGAAGAAGAAGCAGTTTGT+AGG	+	Chr3:77854836-77854855	MsG0380016008.01.T01:CDS	40.0%
	CAGCATGAATTCTCTCCTAA+TGG	+	Chr3:77857377-77857396	MsG0380016008.01.T01:CDS	40.0%
	CTACAAACTGCTTCTTCTTC+TGG	-	Chr3:77854838-77854857	None:intergenic	40.0%
	CTTGTAGCTTAATGTGAGTG+CGG	+	Chr3:77857308-77857327	MsG0380016008.01.T01:intron	40.0%
	GAATGAGACCTTGAAGTTGA+AGG	-	Chr3:77853984-77854003	None:intergenic	40.0%
	GACACTCGTAATCCTAAGTT+TGG	+	Chr3:77853325-77853344	MsG0380016008.01.T01:intron	40.0%
	GACTTGACTTTGGTAGAATG+TGG	-	Chr3:77853837-77853856	None:intergenic	40.0%
	GGAGTTATGTAAAGTCTGAC+CGG	+	Chr3:77853351-77853370	MsG0380016008.01.T01:intron	40.0%
	GTACATGGAAGACATGTAGA+GGG	+	Chr3:77854089-77854108	MsG0380016008.01.T01:CDS	40.0%
	GTGGTATCAACTACAGTCAT+TGG	-	Chr3:77857527-77857546	None:intergenic	40.0%
	GTGTACCAGGTTTCAGATTT+GGG	+	Chr3:77856439-77856458	MsG0380016008.01.T01:intron	40.0%
	GTTAATCCTCTCAGAAGAAG+AGG	+	Chr3:77853303-77853322	MsG0380016008.01.T01:intron	40.0%
	TAAGACCTGCAACAGATTCT+AGG	+	Chr3:77854300-77854319	MsG0380016008.01.T01:CDS	40.0%
	TAATTAGAGAAGGCAGTTGG+GGG	-	Chr3:77856156-77856175	None:intergenic	40.0%
	TACCCTATGGTTCAAACCAA+TGG	-	Chr3:77853196-77853215	None:intergenic	40.0%
	TCCAACATCGCATAATTACG+TGG	+	Chr3:77855742-77855761	MsG0380016008.01.T01:intron	40.0%
	TCCACGTAATTATGCGATGT+TGG	-	Chr3:77855746-77855765	None:intergenic	40.0%
	TCTCTTGCATTGAATCACTG+CGG	-	Chr3:77854385-77854404	None:intergenic	40.0%
	TCTGCACCTGAATTAGCAAT+TGG	-	Chr3:77854065-77854084	None:intergenic	40.0%
	TGAAAGAGAACATGCCATGT+GGG	+	Chr3:77856062-77856081	MsG0380016008.01.T01:intron	40.0%
	TGAAAGGAGACCTAAAATGC+AGG	-	Chr3:77856497-77856516	None:intergenic	40.0%
	TGTACATGGAAGACATGTAG+AGG	+	Chr3:77854088-77854107	MsG0380016008.01.T01:CDS	40.0%
	TTGAAAGAGAACATGCCATG+TGG	+	Chr3:77856061-77856080	MsG0380016008.01.T01:intron	40.0%
!	AGAGTGTTACTGGAAGATTC+CGG	-	Chr3:77855011-77855030	None:intergenic	40.0%
!	ATAAGGCTGGTTGTAGTCTA+GGG	+	Chr3:77855302-77855321	MsG0380016008.01.T01:intron	40.0%
!	ATGACTGTAGTTGATACCAC+TGG	+	Chr3:77857527-77857546	MsG0380016008.01.T01:exon	40.0%
!	GAAAAACTGGTCTAAACCAG+TGG	-	Chr3:77857546-77857565	None:intergenic	40.0%
!	GACTCGATCATTTTCAGTTC+CGG	+	Chr3:77854256-77854275	MsG0380016008.01.T01:CDS	40.0%
!	GCTTGCATACTTTTGCTTTC+TGG	+	Chr3:77856230-77856249	MsG0380016008.01.T01:intron	40.0%
!	TAATGTGAGTGCGGTTTTCT+CGG	+	Chr3:77857317-77857336	MsG0380016008.01.T01:CDS	40.0%
!	TAGTGTTTTCAAAACCGGAC+CGG	+	Chr3:77856293-77856312	MsG0380016008.01.T01:intron	40.0%
!	TATAAGGCTGGTTGTAGTCT+AGG	+	Chr3:77855301-77855320	MsG0380016008.01.T01:intron	40.0%
!	TGCATACTTTTGCTTTCTGG+AGG	+	Chr3:77856233-77856252	MsG0380016008.01.T01:intron	40.0%
!	TTAGCGGCTTTGACATTAAC+CGG	-	Chr3:77854278-77854297	None:intergenic	40.0%
!	TTGCCTTTCTCCTGCATTTT+AGG	+	Chr3:77856484-77856503	MsG0380016008.01.T01:CDS	40.0%
!!	AAGATTGGCATTCTAGAGTG+TGG	+	Chr3:77857625-77857644	MsG0380016008.01.T01:three_prime_UTR	40.0%
!!	CACATTCATTGGTGTCATGT+CGG	-	Chr3:77856871-77856890	None:intergenic	40.0%
!!	TGTTGATTTCACAGTCCAGA+AGG	+	Chr3:77853691-77853710	MsG0380016008.01.T01:intron	40.0%
!!!	TTTTTTTGTTGGCAGTGAGC+AGG	+	Chr3:77857144-77857163	MsG0380016008.01.T01:intron	40.0%
	AACGTATGCCGAACAACAGT+CGG	-	Chr3:77855051-77855070	None:intergenic	45.0%
	AACTTGGGATTACGAGTGTC+CGG	-	Chr3:77853373-77853392	None:intergenic	45.0%
	AATTAGAGAAGGCAGTTGGG+GGG	-	Chr3:77856155-77856174	None:intergenic	45.0%
	ACAGGATGACAAATGCGAAC+TGG	-	Chr3:77857196-77857215	None:intergenic	45.0%
	ACCAAGACTGTGCAGTAAAG+TGG	+	Chr3:77854938-77854957	MsG0380016008.01.T01:CDS	45.0%
	ACCACTTTACTGCACAGTCT+TGG	-	Chr3:77854942-77854961	None:intergenic	45.0%
	ACTTTGACTGGATCGATGAC+CGG	-	Chr3:77856315-77856334	None:intergenic	45.0%
	ACTTTGGTAGAATGTGGCCT+TGG	-	Chr3:77853831-77853850	None:intergenic	45.0%
	AGATGAAAGACTAGGCCTTC+TGG	-	Chr3:77853709-77853728	None:intergenic	45.0%
	AGTCATTGAAGATGCTTCCG+AGG	+	Chr3:77854807-77854826	MsG0380016008.01.T01:intron	45.0%
	CAGTGACTCAGTACTTTGAC+TGG	-	Chr3:77856327-77856346	None:intergenic	45.0%
	CAGTGAGCAGGAGTTACATA+TGG	+	Chr3:77857156-77857175	MsG0380016008.01.T01:intron	45.0%
	CTCTTGCATTGAATCACTGC+GGG	-	Chr3:77854384-77854403	None:intergenic	45.0%
	GAAACACCATCAGTAGTTGC+TGG	-	Chr3:77854359-77854378	None:intergenic	45.0%
	GAACCTGGACTCGATAATGT+AGG	-	Chr3:77853792-77853811	None:intergenic	45.0%
	GAAGAAAGCGAGTTTACCCA+TGG	-	Chr3:77856536-77856555	None:intergenic	45.0%
	GACAACCACATCAACTGCAA+AGG	+	Chr3:77857484-77857503	MsG0380016008.01.T01:CDS	45.0%
	GACACTCGTAATCCCAAGTT+TGG	+	Chr3:77853373-77853392	MsG0380016008.01.T01:intron	45.0%
	GAGCCCCTAAAATCGTTGAA+TGG	+	Chr3:77856692-77856711	MsG0380016008.01.T01:intron	45.0%
	GAGTCACTGGTCAAACCAAT+GGG	+	Chr3:77856338-77856357	MsG0380016008.01.T01:CDS	45.0%
	GCAGGAGAAAGGCAATGAAA+TGG	-	Chr3:77856479-77856498	None:intergenic	45.0%
	GGATGTACCAGTACTTGTCT+TGG	+	Chr3:77856200-77856219	MsG0380016008.01.T01:intron	45.0%
	GTTCCCTTCATCGAGTAAAG+CGG	+	Chr3:77854019-77854038	MsG0380016008.01.T01:CDS	45.0%
	TATACTCTACAGGATCTGGC+AGG	+	Chr3:77856179-77856198	MsG0380016008.01.T01:intron	45.0%
	TATGTATGCGGGACCAGAAA+AGG	+	Chr3:77855529-77855548	MsG0380016008.01.T01:intron	45.0%
	TCAGGTGCAGAGAATGTACA+TGG	+	Chr3:77854074-77854093	MsG0380016008.01.T01:CDS	45.0%
	TGACTCGTTCAGTGAATACC+AGG	-	Chr3:77855431-77855450	None:intergenic	45.0%
	TGAGTCACTGGTCAAACCAA+TGG	+	Chr3:77856337-77856356	MsG0380016008.01.T01:CDS	45.0%
!	AATCCTTTTCCCACTGAGTG+GGG	+	Chr3:77855577-77855596	MsG0380016008.01.T01:intron	45.0%
!	CAATCCTTTTCCCACTGAGT+GGG	+	Chr3:77855576-77855595	MsG0380016008.01.T01:intron	45.0%
!	GATTTGTTTGGTGGAGCTTG+CGG	+	Chr3:77854858-77854877	MsG0380016008.01.T01:CDS	45.0%
!	GCACTTTCTAGTGTCCTTGT+TGG	-	Chr3:77853741-77853760	None:intergenic	45.0%
!	GGTTGTAGTCTAGGGTCATT+AGG	+	Chr3:77855310-77855329	MsG0380016008.01.T01:intron	45.0%
!	TGCATCCTTTGCAGTTGATG+TGG	-	Chr3:77857492-77857511	None:intergenic	45.0%
!	TTGCATTTTGTCACGCCGTT+TGG	+	Chr3:77854780-77854799	MsG0380016008.01.T01:intron	45.0%
!	TTGCTTTCTGGAGGAACTAC+TGG	+	Chr3:77856242-77856261	MsG0380016008.01.T01:intron	45.0%
!!	ATGCTTACTTGTTGGCCTTG+TGG	+	Chr3:77855204-77855223	MsG0380016008.01.T01:intron	45.0%
!!	CAGTCAAAGTACTGAGTCAC+TGG	+	Chr3:77856325-77856344	MsG0380016008.01.T01:CDS	45.0%
!!	TCAACGATTTTAGGGGCTCA+AGG	-	Chr3:77856691-77856710	None:intergenic	45.0%
!!	AAAATGAAAAAATATAATTA+AGG	-	Chr3:77856593-77856612	None:intergenic	5.0%
!!	AAATGAAAAAATATAATTAA+GGG	-	Chr3:77856592-77856611	None:intergenic	5.0%
!!!	ATTAATTTTTTATCATAAAA+AGG	-	Chr3:77854481-77854500	None:intergenic	5.0%
!!!	TTTTTTTTTTTTTTTTTACT+AGG	+	Chr3:77855813-77855832	MsG0380016008.01.T01:intron	5.0%
	AGACGCCTAGAATCTGTTGC+AGG	-	Chr3:77854308-77854327	None:intergenic	50.0%
	AGGGGGAGATACTCTTAGGA+TGG	+	Chr3:77854882-77854901	MsG0380016008.01.T01:CDS	50.0%
	ATGTCTGCAAGCAGGATGTC+CGG	+	Chr3:77854989-77855008	MsG0380016008.01.T01:CDS	50.0%
	CATGGAAGACATGTAGAGGG+TGG	+	Chr3:77854092-77854111	MsG0380016008.01.T01:CDS	50.0%
	CCACTCAGTGGGAAAAGGAT+TGG	-	Chr3:77855578-77855597	None:intergenic	50.0%
	CTAGTCCTCCGACTGTTGTT+CGG	+	Chr3:77855040-77855059	MsG0380016008.01.T01:CDS	50.0%
	GACATGTGATGTCTGCAAGC+AGG	+	Chr3:77854981-77855000	MsG0380016008.01.T01:CDS	50.0%
	GAGTGTCCTCTTCTTCTGAG+AGG	-	Chr3:77853312-77853331	None:intergenic	50.0%
	GGTCCTACATTATCGAGTCC+AGG	+	Chr3:77853786-77853805	MsG0380016008.01.T01:CDS	50.0%
	TAAAGCGGCGCATTCGTTAC+CGG	+	Chr3:77854034-77854053	MsG0380016008.01.T01:CDS	50.0%
	TGCAACAGATTCTAGGCGTC+TGG	+	Chr3:77854307-77854326	MsG0380016008.01.T01:CDS	50.0%
!	AATGAAATGGCGAGAGCACG+TGG	-	Chr3:77856466-77856485	None:intergenic	50.0%
!	ATGAAATGGCGAGAGCACGT+GGG	-	Chr3:77856465-77856484	None:intergenic	50.0%
!	CCAATCCTTTTCCCACTGAG+TGG	+	Chr3:77855575-77855594	MsG0380016008.01.T01:intron	50.0%
!	TTGGTAGAATGTGGCCTTGG+TGG	-	Chr3:77853828-77853847	None:intergenic	50.0%
!!	AGGATGGACTGCAGTTGCAA+AGG	+	Chr3:77854898-77854917	MsG0380016008.01.T01:CDS	50.0%
	CCACAGCCAGCAACTACTGA+TGG	+	Chr3:77854350-77854369	MsG0380016008.01.T01:CDS	55.0%
	CGGAAGGGGGAGATACTCTT+AGG	+	Chr3:77854878-77854897	MsG0380016008.01.T01:CDS	55.0%
	GTATGCCGAACAACAGTCGG+AGG	-	Chr3:77855048-77855067	None:intergenic	55.0%
	TCGAGTCCAGGTTCCACTAG+AGG	+	Chr3:77853798-77853817	MsG0380016008.01.T01:CDS	55.0%
	TTCCTCTGCCTCTAGTGCTC+TGG	+	Chr3:77855713-77855732	MsG0380016008.01.T01:intron	55.0%
	TTTGGTGGAGCTTGCGGAAG+GGG	+	Chr3:77854864-77854883	MsG0380016008.01.T01:CDS	55.0%
!	CCATCAGTAGTTGCTGGCTG+TGG	-	Chr3:77854353-77854372	None:intergenic	55.0%
!	CTTTTCCCACTGAGTGGGGT+CGG	+	Chr3:77855581-77855600	MsG0380016008.01.T01:intron	55.0%
!	GAGGATAGCCAGAGCACTAG+AGG	-	Chr3:77855724-77855743	None:intergenic	55.0%
!	GCGCCGCTTTACTCGATGAA+GGG	-	Chr3:77854025-77854044	None:intergenic	55.0%
!	GTGGGCCCAAATCTGAAACC+TGG	-	Chr3:77856447-77856466	None:intergenic	55.0%
!	GTTTGGTGGAGCTTGCGGAA+GGG	+	Chr3:77854863-77854882	MsG0380016008.01.T01:CDS	55.0%
!	TGCGCCGCTTTACTCGATGA+AGG	-	Chr3:77854026-77854045	None:intergenic	55.0%
!	TGTTTGGTGGAGCTTGCGGA+AGG	+	Chr3:77854862-77854881	MsG0380016008.01.T01:CDS	55.0%
	ACTGAGTGGGGTCGGCTACA+TGG	+	Chr3:77855589-77855608	MsG0380016008.01.T01:intron	60.0%
	AGAAGGCAGTTGGGGGGTTG+GGG	-	Chr3:77856149-77856168	None:intergenic	60.0%
	AGAGAAGGCAGTTGGGGGGT+TGG	-	Chr3:77856151-77856170	None:intergenic	60.0%
	ATGTAGCCGACCCCACTCAG+TGG	-	Chr3:77855590-77855609	None:intergenic	60.0%
	CCACTAGAGGACTGCCACCA+AGG	+	Chr3:77853811-77853830	MsG0380016008.01.T01:CDS	60.0%
	CGACCCCACTCAGTGGGAAA+AGG	-	Chr3:77855583-77855602	None:intergenic	60.0%
	GACTGGATCGATGACCGGTC+CGG	-	Chr3:77856310-77856329	None:intergenic	60.0%
	GAGAAGGCAGTTGGGGGGTT+GGG	-	Chr3:77856150-77856169	None:intergenic	60.0%
	GGCAGTCCTCTAGTGGAACC+TGG	-	Chr3:77853807-77853826	None:intergenic	60.0%
	TGTAGCCGACCCCACTCAGT+GGG	-	Chr3:77855589-77855608	None:intergenic	60.0%
	TTGGTGGAGCTTGCGGAAGG+GGG	+	Chr3:77854865-77854884	MsG0380016008.01.T01:CDS	60.0%
!	AGCCAGAGCACTAGAGGCAG+AGG	-	Chr3:77855718-77855737	None:intergenic	60.0%
!	CCTTGGTGGCAGTCCTCTAG+TGG	-	Chr3:77853814-77853833	None:intergenic	60.0%
	AAGGCAGTTGGGGGGTTGGG+GGG	-	Chr3:77856147-77856166	None:intergenic	65.0%
	GAAGGCAGTTGGGGGGTTGG+GGG	-	Chr3:77856148-77856167	None:intergenic	65.0%
	AGGCAGTTGGGGGGTTGGGG+GGG	-	Chr3:77856146-77856165	None:intergenic	70.0%
	GGCAGTTGGGGGGTTGGGGG+GGG	-	Chr3:77856145-77856164	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	77853017	77857765	77853017	ID=MsG0380016008.01;Name=MsG0380016008.01
Chr3	mRNA	77853017	77857765	77853017	ID=MsG0380016008.01.T01;Parent=MsG0380016008.01;Name=MsG0380016008.01.T01;_AED=0.50;_eAED=0.52;_QI=0\|0.57\|0.62\|1\|1\|1\|8\|235\|473
Chr3	exon	77853017	77853091	77853017	ID=MsG0380016008.01.T01:exon:18060;Parent=MsG0380016008.01.T01
Chr3	exon	77853705	77854127	77853705	ID=MsG0380016008.01.T01:exon:18061;Parent=MsG0380016008.01.T01
Chr3	exon	77854233	77854407	77854233	ID=MsG0380016008.01.T01:exon:18062;Parent=MsG0380016008.01.T01
Chr3	exon	77854809	77855106	77854809	ID=MsG0380016008.01.T01:exon:18063;Parent=MsG0380016008.01.T01
Chr3	exon	77856296	77856359	77856296	ID=MsG0380016008.01.T01:exon:18064;Parent=MsG0380016008.01.T01
Chr3	exon	77856448	77856538	77856448	ID=MsG0380016008.01.T01:exon:18065;Parent=MsG0380016008.01.T01
Chr3	exon	77857159	77857238	77857159	ID=MsG0380016008.01.T01:exon:18066;Parent=MsG0380016008.01.T01
Chr3	exon	77857315	77857765	77857315	ID=MsG0380016008.01.T01:exon:18067;Parent=MsG0380016008.01.T01
Chr3	CDS	77853017	77853091	77853017	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77853705	77854127	77853705	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77854233	77854407	77854233	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77854809	77855106	77854809	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77856296	77856359	77856296	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77856448	77856538	77856448	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77857159	77857238	77857159	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	CDS	77857315	77857530	77857315	ID=MsG0380016008.01.T01:cds;Parent=MsG0380016008.01.T01
Chr3	three_prime_UTR	77857531	77857765	77857531	ID=MsG0380016008.01.T01:three_prime_utr;Parent=MsG0380016008.01.T01

Gene Sequence

>MsG0380016008.01.T01

ATGGAGAAGGAAGGTGTTGAACTTCAAACTGATGCAGTTCCAATGATGTCAGATTCTTCTCTTCTTCATCATCAGTCCAGAAGGCCTAGTCTTTCATCTCTACAAATACCAACAAGGACACTAGAAAGTGCATTATCATCTTCTACTAAGACAGATGGTCCTACATTATCGAGTCCAGGTTCCACTAGAGGACTGCCACCAAGGCCACATTCTACCAAAGTCAAGTCCTCTATGAAAAATTTACTTTCTGATAGGAGCTTTAGGACAAAAACTTGTTCAGAAGATTCTGAAAAGAGAGTTTTGATTGTTTCTGATACTTTATCATCAGATAATGGTCCTTTGGATAATAAGCCTTCAACTTCAAGGTCTCATTCACTTAATAAGATTCTGTTCCCTTCATCGAGTAAAGCGGCGCATTCGTTACCGGTTACTCCAATTGCTAATTCAGGTGCAGAGAATGTACATGGAAGACATGTAGAGGGTGGTTCTGATTCAAATAAATCGAAAGTGAATAAGCATATGACTCGATCATTTTCAGTTCCGGTTAATGTCAAAGCCGCTAATTTAAGACCTGCAACAGATTCTAGGCGTCTGGTTCGTGTAATTTCAGCAAGACCACAGCCAGCAACTACTGATGGTGTTTCAACCCGCAGTGATTCAATGCAAGAGATTGTCATTGAAGATGCTTCCGAGGATATTCCAGAAGAAGAAGCAGTTTGTAGGATTTGTTTGGTGGAGCTTGCGGAAGGGGGAGATACTCTTAGGATGGACTGCAGTTGCAAAGGTGAGCTTGCACTTGCACACCAAGACTGTGCAGTAAAGTGGTTTAGTATCAAAGGAAATAAGACATGTGATGTCTGCAAGCAGGATGTCCGGAATCTTCCAGTAACACTCTTGAAAATTTCTAGTCCTCCGACTGTTGTTCGGCATACGTTGAATGCATCACAACAGAGAGCAGTAGCTAATTACAGTGTTTTCAAAACCGGACCGGTCATCGATCCAGTCAAAGTACTGAGTCACTGGTCAAACCAATGGGTTTCAGATTTGGGCCCACGTGCTCTCGCCATTTCATTGCCTTTCTCCTGCATTTTAGGTCTCCTTTCATCTATCATTGCTTCAACCATGGTGAGCAGGAGTTACATATGGGCTTATGCTTGCTTCCAGTTCGCATTTGTCATCCTGTTTGCGCATATATTCTATTCCATACTTAATGTGAGTGCGGTTTTCTCGGTTCTTCTTTCAACATTCACTGGATTTGGGATTGCAATCAGCATGAATTCTCTCCTAATGGAATATATCAGATGGGAAACAAATAGGCAGATTCGATCTTCTAATCAACATATTATTTCGAGTCAGCAGCAGCAAGAAACTCAGAGACAACCACATCAACTGCAAAGGATGCAGCAAGAGCAGCACCAATGA

Protein sequence

>MsG0380016008.01.T01

MEKEGVELQTDAVPMMSDSSLLHHQSRRPSLSSLQIPTRTLESALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLIVSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGGSDSNKSKVNKHMTRSFSVPVNVKAANLRPATDSRRLVRVISARPQPATTDGVSTRSDSMQEIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISSPPTVVRHTLNASQQRAVANYSVFKTGPVIDPVKVLSHWSNQWVSDLGPRALAISLPFSCILGLLSSIIASTMVSRSYIWAYACFQFAFVILFAHIFYSILNVSAVFSVLLSTFTGFGIAISMNSLLMEYIRWETNRQIRSSNQHIISSQQQQETQRQPHQLQRMQQEQHQ*