AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039598.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039598.01.T01 MTR_7g077990 52.750 400 123 8 1 344 1 390 6.53e-126 367
MsG0780039598.01.T01 MTR_7g077910 62.055 253 85 5 106 349 87 337 1.20e-95 288
MsG0780039598.01.T01 MTR_3g013470 44.865 370 130 11 36 342 14 372 2.72e-87 268
MsG0780039598.01.T01 MTR_4g013180 42.526 388 157 10 10 334 1 385 8.86e-87 270
MsG0780039598.01.T01 MTR_5g058620 56.322 261 96 8 100 347 26 281 5.25e-86 261
MsG0780039598.01.T01 MTR_1g058870 56.322 261 96 8 100 347 26 281 5.25e-86 261
MsG0780039598.01.T01 MTR_1g088120 40.964 415 159 14 12 348 5 411 6.55e-84 260
MsG0780039598.01.T01 MTR_1g015740 45.283 371 127 12 10 348 1 327 2.32e-82 253
MsG0780039598.01.T01 MTR_7g079160 55.777 251 101 6 77 325 162 404 2.81e-82 258
MsG0780039598.01.T01 MTR_7g079160 47.458 118 44 4 10 116 1 111 7.14e-19 87.8
MsG0780039598.01.T01 MTR_7g056003 42.015 407 150 12 14 346 12 406 9.32e-80 249
MsG0780039598.01.T01 MTR_7g078040 48.432 287 125 6 80 348 152 433 7.50e-79 248
MsG0780039598.01.T01 MTR_7g078040 57.895 95 35 2 10 99 1 95 2.55e-23 100
MsG0780039598.01.T01 MTR_7g078840 53.101 258 104 7 104 348 179 432 1.96e-77 244
MsG0780039598.01.T01 MTR_7g078840 50.962 104 43 3 9 106 2 103 1.63e-17 83.6
MsG0780039598.01.T01 MTR_6g065510 43.944 355 156 11 4 348 10 331 6.07e-77 240
MsG0780039598.01.T01 MTR_3g464500 38.228 395 171 10 11 346 21 401 9.56e-76 239
MsG0780039598.01.T01 MTR_7g078900 53.558 267 96 9 97 348 170 423 1.30e-75 239
MsG0780039598.01.T01 MTR_7g078900 46.087 115 53 4 1 111 1 110 1.26e-15 77.8
MsG0780039598.01.T01 MTR_7g077070 46.078 306 138 9 59 348 136 430 2.80e-75 239
MsG0780039598.01.T01 MTR_7g077070 50.476 105 50 2 1 104 1 104 4.77e-20 90.9
MsG0780039598.01.T01 MTR_3g464470 39.286 392 168 11 11 346 1 378 3.33e-75 237
MsG0780039598.01.T01 MTR_7g055830 43.333 360 163 9 14 346 10 355 4.40e-75 236
MsG0780039598.01.T01 MTR_7g077970 50.189 265 108 7 101 348 165 422 2.96e-74 236
MsG0780039598.01.T01 MTR_7g077970 53.153 111 40 4 17 123 7 109 7.45e-22 96.3
MsG0780039598.01.T01 MTR_4g013185 50.758 264 107 7 101 348 170 426 1.16e-73 234
MsG0780039598.01.T01 MTR_4g013185 48.889 90 45 1 9 97 2 91 2.81e-17 82.8
MsG0780039598.01.T01 MTR_7g078860 53.036 247 92 7 86 324 149 379 2.01e-72 230
MsG0780039598.01.T01 MTR_7g078860 50.515 97 44 2 19 111 11 107 2.77e-17 82.8
MsG0780039598.01.T01 MTR_1g442850 40.102 394 144 14 19 346 7 374 2.59e-72 229
MsG0780039598.01.T01 MTR_0464s0020 40.326 429 161 17 4 346 8 427 5.47e-72 230
MsG0780039598.01.T01 MTR_4g013175 51.136 264 106 7 101 348 170 426 2.75e-71 228
MsG0780039598.01.T01 MTR_4g013175 52.222 90 42 1 9 97 2 91 4.74e-14 73.2
MsG0780039598.01.T01 MTR_6g016285 37.705 427 165 14 4 346 7 416 4.57e-71 228
MsG0780039598.01.T01 MTR_0242s0060 47.909 263 112 6 101 348 166 418 1.25e-70 226
MsG0780039598.01.T01 MTR_0242s0060 53.782 119 42 5 10 123 1 111 9.52e-23 98.6
MsG0780039598.01.T01 MTR_0242s0040 47.909 263 112 6 101 348 166 418 1.25e-70 226
MsG0780039598.01.T01 MTR_0242s0040 53.782 119 42 5 10 123 1 111 9.52e-23 98.6
MsG0780039598.01.T01 MTR_7g056503 38.596 399 163 12 12 346 16 396 1.36e-70 226
MsG0780039598.01.T01 MTR_7g078880 41.739 345 142 10 17 344 9 311 8.85e-69 221
MsG0780039598.01.T01 MTR_2g043400 48.837 258 104 7 102 346 174 416 2.02e-68 221
MsG0780039598.01.T01 MTR_7g078960 49.612 258 97 9 104 348 50 287 2.42e-68 216
MsG0780039598.01.T01 MTR_4g008790 53.017 232 78 6 101 324 208 416 4.60e-68 221
MsG0780039598.01.T01 MTR_4g008790 55.263 76 34 0 4 79 26 101 1.70e-13 71.6
MsG0780039598.01.T01 MTR_7g055987 42.424 330 115 8 4 276 7 318 5.45e-68 218
MsG0780039598.01.T01 MTR_7g056290 50.575 261 97 9 101 346 176 419 6.10e-68 219
MsG0780039598.01.T01 MTR_7g056290 50.000 70 34 1 14 82 19 88 2.12e-12 68.2
MsG0780039598.01.T01 MTR_4g030830 35.750 400 175 10 15 346 7 392 1.22e-67 218
MsG0780039598.01.T01 MTR_5g068040 39.646 396 169 11 5 348 4 381 1.33e-67 217
MsG0780039598.01.T01 MTR_7g060940 37.956 411 150 13 9 346 14 392 2.52e-67 217
MsG0780039598.01.T01 MTR_7g056390 49.421 259 100 8 104 348 176 417 5.79e-67 217
MsG0780039598.01.T01 MTR_7g056390 60.000 60 22 2 14 72 15 73 4.88e-12 67.0
MsG0780039598.01.T01 MTR_7g056200 38.814 371 173 13 17 346 23 380 1.13e-66 215
MsG0780039598.01.T01 MTR_7g060960 40.599 367 151 12 16 346 31 366 4.89e-66 213
MsG0780039598.01.T01 MTR_3g080370 36.634 404 146 12 31 346 35 416 8.29e-65 212
MsG0780039598.01.T01 MTR_2g043410 46.124 258 110 6 102 346 174 415 8.59e-65 211
MsG0780039598.01.T01 MTR_2g043410 53.333 60 27 1 3 61 7 66 9.00e-11 63.2
MsG0780039598.01.T01 MTR_7g445890 37.121 396 184 14 1 346 1 381 4.93e-64 208
MsG0780039598.01.T01 MTR_7g055977 38.131 396 160 12 17 348 7 381 7.40e-64 207
MsG0780039598.01.T01 MTR_2g047200 37.438 406 155 15 12 346 15 392 9.36e-64 208
MsG0780039598.01.T01 MTR_7g028660 35.396 404 164 12 12 348 6 379 3.53e-63 206
MsG0780039598.01.T01 MTR_4g128320 41.033 329 124 10 1 326 1 262 3.60e-63 202
MsG0780039598.01.T01 MTR_4g024890 35.204 392 182 11 13 346 6 383 7.45e-63 205
MsG0780039598.01.T01 MTR_7g066840 36.802 394 169 11 15 346 21 396 4.17e-62 204
MsG0780039598.01.T01 MTR_0649s0020 36.634 404 171 16 10 346 1 386 8.27e-62 202
MsG0780039598.01.T01 MTR_6g055210 44.487 263 115 7 104 346 167 418 9.00e-62 204
MsG0780039598.01.T01 MTR_2g006360 38.043 368 140 11 16 346 45 361 1.11e-61 201
MsG0780039598.01.T01 MTR_2g461450 36.264 364 165 10 12 325 10 356 1.94e-61 201
MsG0780039598.01.T01 MTR_7g091630 36.253 411 174 10 14 346 29 429 2.79e-61 202
MsG0780039598.01.T01 MTR_5g069760 36.409 401 150 15 17 348 6 370 6.69e-59 194
MsG0780039598.01.T01 MTR_0097s0030 35.411 401 172 12 11 346 8 386 8.66e-59 195
MsG0780039598.01.T01 MTR_2g047240 35.411 401 172 12 11 346 8 386 8.66e-59 195
MsG0780039598.01.T01 MTR_3g072470 46.850 254 109 8 104 345 176 415 8.98e-59 196
MsG0780039598.01.T01 MTR_3g072470 58.621 58 23 1 14 70 16 73 9.31e-12 66.2
MsG0780039598.01.T01 MTR_7g022670 37.360 356 196 12 3 346 9 349 2.50e-58 192
MsG0780039598.01.T01 MTR_7g066850 35.208 409 185 15 3 346 10 403 1.91e-57 193
MsG0780039598.01.T01 MTR_1g015730 48.473 262 101 10 100 348 155 395 2.43e-57 191
MsG0780039598.01.T01 MTR_1g015730 48.113 106 47 4 15 117 7 107 2.19e-15 77.0
MsG0780039598.01.T01 MTR_5g069930 34.673 398 168 14 17 348 6 377 2.53e-57 191
MsG0780039598.01.T01 MTR_4g129190 36.453 406 163 16 17 348 6 390 3.74e-57 191
MsG0780039598.01.T01 MTR_4g030090 34.568 405 176 13 14 346 11 398 3.82e-57 191
MsG0780039598.01.T01 MTR_7g061010 36.111 396 158 10 16 346 21 386 4.00e-57 190
MsG0780039598.01.T01 MTR_7g061050 36.432 398 157 13 17 346 13 382 4.77e-57 190
MsG0780039598.01.T01 MTR_4g031020 41.569 255 128 5 102 347 185 427 1.45e-56 190
MsG0780039598.01.T01 MTR_4g031020 40.260 77 44 1 8 82 6 82 2.03e-11 65.1
MsG0780039598.01.T01 MTR_7g056173 45.455 253 116 8 104 346 25 265 3.79e-56 186
MsG0780039598.01.T01 MTR_7g055870 44.444 261 125 6 95 346 174 423 4.56e-56 189
MsG0780039598.01.T01 MTR_7g055870 67.241 58 18 1 14 71 10 66 1.09e-14 75.1
MsG0780039598.01.T01 MTR_3g437520 46.614 251 111 7 91 333 176 411 5.90e-56 189
MsG0780039598.01.T01 MTR_3g437520 70.213 47 13 1 16 61 22 68 1.22e-11 65.9
MsG0780039598.01.T01 MTR_7g055930 45.200 250 117 6 106 346 185 423 6.82e-56 188
MsG0780039598.01.T01 MTR_7g055930 70.690 58 16 1 14 71 10 66 1.16e-15 78.2
MsG0780039598.01.T01 MTR_4g030980 40.945 254 129 5 103 347 186 427 1.27e-55 187
MsG0780039598.01.T01 MTR_4g030110 34.949 392 154 14 4 324 17 378 1.30e-55 186
MsG0780039598.01.T01 MTR_7g056737 35.659 387 161 12 2 323 7 370 1.44e-55 187
MsG0780039598.01.T01 MTR_0128s0070 35.194 412 178 14 3 348 9 397 2.64e-55 186
MsG0780039598.01.T01 MTR_8g066440 44.800 250 109 6 106 348 175 402 6.89e-55 185
MsG0780039598.01.T01 MTR_7g113500 40.458 262 140 7 93 349 133 383 2.13e-54 183
MsG0780039598.01.T01 MTR_7g050480 34.414 401 176 11 8 346 13 388 3.49e-54 183
MsG0780039598.01.T01 MTR_5g056020 41.379 261 126 7 104 346 168 419 4.00e-54 185
MsG0780039598.01.T01 MTR_7g050520 34.663 401 175 12 8 346 13 388 5.80e-54 182
MsG0780039598.01.T01 MTR_7g057270 43.200 250 125 6 103 346 174 412 7.97e-54 182
MsG0780039598.01.T01 MTR_7g062100 37.010 408 171 15 3 346 10 395 8.38e-54 182
MsG0780039598.01.T01 MTR_7g055953 46.371 248 106 11 106 348 90 315 2.89e-53 178
MsG0780039598.01.T01 MTR_5g096710 33.668 398 179 12 14 346 20 397 5.72e-53 180
MsG0780039598.01.T01 MTR_7g066030 42.972 249 122 6 101 348 174 403 1.23e-52 179
MsG0780039598.01.T01 MTR_7g070830 42.857 252 124 9 102 346 181 419 3.72e-52 178
MsG0780039598.01.T01 MTR_1g029650 43.820 267 109 11 101 348 160 404 3.75e-52 178
MsG0780039598.01.T01 MTR_1g029650 70.769 65 18 1 10 74 1 64 2.68e-21 94.4
MsG0780039598.01.T01 MTR_6g017280 32.658 395 186 11 16 346 8 386 5.97e-52 177
MsG0780039598.01.T01 MTR_7g070880 42.460 252 125 9 102 346 181 419 7.01e-52 177
MsG0780039598.01.T01 MTR_7g056760 31.655 417 190 11 3 346 9 403 1.36e-51 176
MsG0780039598.01.T01 MTR_5g043160 42.745 255 121 9 104 346 215 456 2.27e-51 177
MsG0780039598.01.T01 MTR_5g043160 52.632 57 27 0 14 70 47 103 5.18e-11 63.9
MsG0780039598.01.T01 MTR_7g062060 43.902 246 113 6 104 348 179 400 2.29e-51 176
MsG0780039598.01.T01 MTR_7g062060 43.529 85 45 2 13 97 8 89 3.66e-13 70.5
MsG0780039598.01.T01 MTR_7g066010 30.769 416 168 11 2 348 6 370 2.56e-51 175
MsG0780039598.01.T01 MTR_6g092560 32.609 414 170 14 15 347 10 395 2.87e-51 176
MsG0780039598.01.T01 MTR_0128s0020 34.783 414 178 15 3 348 5 394 3.28e-51 175
MsG0780039598.01.T01 MTR_6g088385 36.339 366 157 13 3 347 8 318 4.76e-51 172
MsG0780039598.01.T01 MTR_4g019990 41.961 255 120 8 102 346 151 387 1.72e-50 173
MsG0780039598.01.T01 MTR_4g019990 57.407 54 22 1 13 66 2 54 2.18e-11 65.1
MsG0780039598.01.T01 MTR_7g061060 34.574 376 159 12 17 324 13 369 9.47e-50 171
MsG0780039598.01.T01 MTR_7g052150 33.500 400 175 13 16 346 21 398 1.29e-49 171
MsG0780039598.01.T01 MTR_2g047892 35.260 346 177 12 18 346 80 395 1.31e-48 168
MsG0780039598.01.T01 MTR_2g047892 53.125 64 29 1 12 75 17 79 6.28e-14 72.8
MsG0780039598.01.T01 MTR_4g030760 32.316 393 175 15 13 346 69 429 2.09e-48 169
MsG0780039598.01.T01 MTR_7g061090 43.426 251 114 9 104 349 180 407 4.08e-48 167
MsG0780039598.01.T01 MTR_7g061090 64.706 51 18 0 12 62 17 67 6.33e-14 72.8
MsG0780039598.01.T01 MTR_2g010950 40.161 249 133 8 103 346 166 403 5.03e-48 167
MsG0780039598.01.T01 MTR_2g010950 58.209 67 27 1 4 70 7 72 3.19e-13 70.5
MsG0780039598.01.T01 MTR_1g071010 31.655 417 182 17 1 346 1 385 1.28e-47 166
MsG0780039598.01.T01 MTR_6g017305 39.130 253 134 6 102 346 40 280 1.44e-47 162
MsG0780039598.01.T01 MTR_0128s0010 32.576 396 187 11 14 346 18 396 2.18e-47 165
MsG0780039598.01.T01 MTR_0707s0020 41.473 258 116 9 104 347 207 443 2.08e-46 164
MsG0780039598.01.T01 MTR_7g056260 56.024 166 63 3 106 270 161 317 2.20e-46 160
MsG0780039598.01.T01 MTR_4g034860 42.857 231 108 6 106 330 188 400 2.22e-46 162
MsG0780039598.01.T01 MTR_7g066000 37.500 248 132 7 106 348 174 403 2.24e-46 162
MsG0780039598.01.T01 MTR_7g034310 41.224 245 109 6 106 348 17 228 2.37e-46 157
MsG0780039598.01.T01 MTR_4g030790 40.000 290 128 13 14 274 16 288 4.49e-46 160
MsG0780039598.01.T01 MTR_7g056710 38.202 267 129 8 82 346 147 379 2.84e-45 159
MsG0780039598.01.T01 MTR_7g056710 47.887 71 36 1 6 76 7 76 9.56e-11 62.8
MsG0780039598.01.T01 MTR_2g010920 39.200 250 134 8 104 346 185 423 3.00e-45 160
MsG0780039598.01.T01 MTR_2g010920 66.667 54 17 1 17 70 20 72 1.68e-13 71.6
MsG0780039598.01.T01 MTR_2g017720 36.278 317 146 13 54 343 9 296 3.95e-45 160
MsG0780039598.01.T01 MTR_7g066100 37.849 251 136 6 101 348 161 394 4.04e-45 159
MsG0780039598.01.T01 MTR_2g010900 34.328 335 147 12 35 302 1 329 1.03e-44 158
MsG0780039598.01.T01 MTR_4g033495 38.492 252 126 6 101 348 179 405 1.38e-44 159
MsG0780039598.01.T01 MTR_4g033495 49.206 63 32 0 13 75 23 85 1.82e-12 68.6
MsG0780039598.01.T01 MTR_7g022600 31.354 421 205 16 2 346 8 420 1.41e-44 158
MsG0780039598.01.T01 MTR_7g009265 38.846 260 140 7 97 348 76 324 2.13e-44 155
MsG0780039598.01.T01 MTR_7g056717 40.078 257 124 8 92 346 156 384 2.39e-44 157
MsG0780039598.01.T01 MTR_7g052670 38.971 272 124 11 98 346 171 423 3.07e-43 155
MsG0780039598.01.T01 MTR_2g047895 40.969 227 105 8 104 325 91 293 2.45e-42 150
MsG0780039598.01.T01 MTR_6g086920 38.433 268 122 10 104 346 219 468 3.28e-42 153
MsG0780039598.01.T01 MTR_1g112010 32.231 363 152 10 39 347 2 324 3.50e-42 149
MsG0780039598.01.T01 MTR_4g129160 44.019 209 100 7 99 300 162 360 5.94e-42 150
MsG0780039598.01.T01 MTR_6g081280 39.516 248 123 8 103 346 15 239 6.22e-42 146
MsG0780039598.01.T01 MTR_4g037465 31.234 381 184 11 2 319 6 371 7.98e-42 150
MsG0780039598.01.T01 MTR_7g056820 37.768 233 123 7 95 324 145 358 2.24e-41 149
MsG0780039598.01.T01 MTR_7g070900 35.354 297 114 9 6 297 172 395 7.05e-41 149
MsG0780039598.01.T01 MTR_7g070900 37.908 153 61 5 1 123 1 149 1.70e-16 80.9
MsG0780039598.01.T01 MTR_7g091610 41.121 214 108 6 139 346 44 245 1.03e-40 144
MsG0780039598.01.T01 MTR_7g091640 45.977 174 84 4 104 273 180 347 1.09e-40 147
MsG0780039598.01.T01 MTR_7g056570 36.396 283 143 9 69 348 135 383 5.11e-40 146
MsG0780039598.01.T01 MTR_7g066080 39.068 279 122 12 94 346 157 413 5.87e-40 146
MsG0780039598.01.T01 MTR_7g056797 31.566 415 191 14 3 346 9 401 1.02e-39 145
MsG0780039598.01.T01 MTR_2g010935 38.075 239 112 7 111 346 43 248 7.27e-39 139
MsG0780039598.01.T01 MTR_4g011660 37.209 258 126 7 108 346 176 416 9.31e-39 142
MsG0780039598.01.T01 MTR_2g047878 38.934 244 103 7 104 346 164 362 4.27e-38 140
MsG0780039598.01.T01 MTR_2g047878 43.284 67 37 1 1 66 5 71 6.49e-11 63.5
MsG0780039598.01.T01 MTR_6g017295 37.302 252 125 8 97 323 86 329 4.56e-38 143
MsG0780039598.01.T01 MTR_7g056170 35.294 306 147 8 54 346 191 458 7.41e-38 141
MsG0780039598.01.T01 MTR_7g056170 71.739 46 13 0 17 62 75 120 4.83e-13 70.1
MsG0780039598.01.T01 MTR_7g066060 37.778 270 134 10 87 346 160 405 7.88e-38 142
MsG0780039598.01.T01 MTR_4g006350 28.535 396 205 12 15 346 492 873 1.04e-37 144
MsG0780039598.01.T01 MTR_6g042600 50.311 161 65 5 194 347 172 324 1.69e-37 139
MsG0780039598.01.T01 MTR_6g017270 33.598 378 168 16 11 346 3 339 2.46e-37 137
MsG0780039598.01.T01 MTR_2g021150 30.273 403 188 15 1 346 1 367 3.13e-37 137
MsG0780039598.01.T01 MTR_7g061100 39.574 235 100 9 15 223 11 229 1.13e-36 135
MsG0780039598.01.T01 MTR_7g078940 37.023 262 95 8 97 346 197 400 1.61e-36 136
MsG0780039598.01.T01 MTR_7g078940 63.889 72 24 2 3 72 17 88 1.41e-18 86.7
MsG0780039598.01.T01 MTR_2g027820 33.951 324 177 10 35 346 1 299 3.88e-36 133
MsG0780039598.01.T01 MTR_7g070937 50.370 135 58 4 104 233 10 140 4.29e-36 129
MsG0780039598.01.T01 MTR_7g061940 39.614 207 105 6 108 313 79 266 7.30e-36 131
MsG0780039598.01.T01 MTR_8g030630 42.778 180 89 4 149 324 72 241 8.57e-36 135
MsG0780039598.01.T01 MTR_8g030630 39.267 191 86 3 130 319 278 439 3.43e-33 128
MsG0780039598.01.T01 MTR_0267s0050 36.207 232 129 6 101 328 154 370 1.26e-34 131
MsG0780039598.01.T01 MTR_7g445750 45.455 165 74 6 101 259 177 331 1.37e-34 129
MsG0780039598.01.T01 MTR_4g020000 36.325 234 129 6 104 330 111 331 3.20e-34 129
MsG0780039598.01.T01 MTR_7g035295 33.730 252 111 6 106 346 172 378 5.21e-34 129
MsG0780039598.01.T01 MTR_7g035295 64.000 50 18 0 15 64 14 63 4.93e-13 70.1
MsG0780039598.01.T01 MTR_3g013950 35.345 232 131 6 101 328 156 372 5.67e-34 129
MsG0780039598.01.T01 MTR_2g021190 28.536 403 190 13 2 346 9 371 1.43e-33 128
MsG0780039598.01.T01 MTR_5g069950 33.460 263 107 8 17 276 6 203 1.25e-32 121
MsG0780039598.01.T01 MTR_7g056023 36.996 273 109 13 17 251 30 277 2.54e-32 122
MsG0780039598.01.T01 MTR_2g060555 36.090 266 118 13 79 336 55 276 3.52e-32 122
MsG0780039598.01.T01 MTR_1g097560 27.246 334 156 7 17 300 36 332 3.63e-31 121
MsG0780039598.01.T01 MTR_2g437110 37.255 255 104 10 106 346 179 391 7.50e-31 122
MsG0780039598.01.T01 MTR_7g066040 45.455 143 68 4 99 235 77 215 7.54e-31 117
MsG0780039598.01.T01 MTR_8g101940 31.000 400 175 18 16 347 1 367 7.61e-31 120
MsG0780039598.01.T01 MTR_1g050542 27.624 362 185 12 8 319 46 380 2.25e-29 117
MsG0780039598.01.T01 MTR_7g070440 35.573 253 122 11 106 347 149 371 7.56e-29 115
MsG0780039598.01.T01 MTR_4g108820 31.579 285 150 9 12 276 37 296 1.18e-28 113
MsG0780039598.01.T01 MTR_7g037670 26.904 394 171 14 3 348 9 333 2.82e-28 112
MsG0780039598.01.T01 MTR_7g058630 40.000 170 93 4 178 346 17 178 3.55e-28 108
MsG0780039598.01.T01 MTR_5g011200 28.642 405 189 20 5 346 6 373 5.60e-28 112
MsG0780039598.01.T01 MTR_8g101580 26.772 381 187 15 4 327 35 380 5.84e-28 113
MsG0780039598.01.T01 MTR_2g046920 29.245 318 143 14 6 266 13 305 1.76e-27 111
MsG0780039598.01.T01 MTR_2g029990 27.154 383 188 12 20 346 54 401 1.84e-27 112
MsG0780039598.01.T01 MTR_7g006360 43.939 132 64 3 219 349 155 277 2.19e-27 109
MsG0780039598.01.T01 MTR_7g006360 41.176 153 60 6 19 152 11 152 1.57e-21 93.6
MsG0780039598.01.T01 MTR_1g047490 38.251 183 62 6 97 271 168 307 2.73e-27 109
MsG0780039598.01.T01 MTR_1g047490 49.231 65 32 1 4 67 8 72 6.93e-11 63.2
MsG0780039598.01.T01 MTR_1g097330 26.455 378 190 13 16 337 15 360 6.24e-27 110
MsG0780039598.01.T01 MTR_2g021155 27.200 375 186 12 17 337 36 377 3.32e-26 110
MsG0780039598.01.T01 MTR_2g021155 27.586 261 133 8 20 270 674 888 7.92e-20 91.3
MsG0780039598.01.T01 MTR_7g077930 58.333 84 33 1 13 96 15 96 3.85e-26 100
MsG0780039598.01.T01 MTR_5g011350 39.310 145 66 3 99 242 115 238 4.55e-26 105
MsG0780039598.01.T01 MTR_2g078850 30.293 307 138 11 20 272 33 317 3.81e-25 104
MsG0780039598.01.T01 MTR_0044s0300 29.042 334 145 11 7 282 31 330 4.10e-25 105
MsG0780039598.01.T01 MTR_7g013590 29.052 327 157 10 3 273 22 329 4.29e-25 105
MsG0780039598.01.T01 MTR_4g053470 28.981 314 164 9 13 301 18 297 5.79e-25 103
MsG0780039598.01.T01 MTR_3g011020 30.000 310 127 10 20 271 31 308 6.44e-25 104
MsG0780039598.01.T01 MTR_2g078900 29.268 328 142 13 3 272 22 317 7.42e-25 103
MsG0780039598.01.T01 MTR_1g094210 26.797 306 150 8 16 272 56 336 7.70e-25 104
MsG0780039598.01.T01 MTR_1g094210 26.797 306 150 8 16 272 56 336 7.79e-25 104
MsG0780039598.01.T01 MTR_1g058190 27.321 377 204 17 8 346 25 369 8.24e-25 103
MsG0780039598.01.T01 MTR_1g016960 53.271 107 45 2 245 348 152 256 1.13e-24 101
MsG0780039598.01.T01 MTR_4g031770 29.381 388 186 18 20 346 7 367 2.31e-24 102
MsG0780039598.01.T01 MTR_5g022420 27.095 358 179 12 1 305 6 334 2.80e-24 102
MsG0780039598.01.T01 MTR_4g107820 28.981 314 145 10 7 266 26 315 4.78e-24 102
MsG0780039598.01.T01 MTR_4g107780 28.981 314 145 10 7 266 26 315 4.78e-24 102
MsG0780039598.01.T01 MTR_4g107780 28.025 314 148 9 7 266 26 315 6.88e-24 102
MsG0780039598.01.T01 MTR_4g107820 28.981 314 145 10 7 266 26 315 6.95e-24 102
MsG0780039598.01.T01 MTR_5g046300 29.642 307 132 13 20 270 7 285 8.33e-24 100
MsG0780039598.01.T01 MTR_5g046290 29.642 307 132 13 20 270 7 285 8.33e-24 100
MsG0780039598.01.T01 MTR_1g054575 26.708 322 158 10 8 274 39 337 8.51e-24 102
MsG0780039598.01.T01 MTR_5g057690 29.097 299 139 12 20 270 49 322 9.20e-24 101
MsG0780039598.01.T01 MTR_0128s0110 32.768 177 103 4 133 306 2 165 1.70e-23 97.1
MsG0780039598.01.T01 MTR_6g065980 26.415 318 154 9 8 275 7 294 1.75e-23 100
MsG0780039598.01.T01 MTR_3g014540 28.142 366 171 14 17 322 29 362 2.67e-23 99.8
MsG0780039598.01.T01 MTR_7g078050 54.286 105 32 2 13 117 2 90 6.42e-23 96.3
MsG0780039598.01.T01 MTR_8g467140 28.344 314 156 10 17 279 32 327 7.48e-23 97.8
MsG0780039598.01.T01 MTR_7g056793 31.034 290 127 13 67 346 4 230 7.84e-23 95.5
MsG0780039598.01.T01 MTR_3g007360 27.451 357 169 13 20 316 55 381 9.19e-23 98.6
MsG0780039598.01.T01 MTR_5g057020 29.293 297 136 12 20 270 49 317 9.46e-23 97.8
MsG0780039598.01.T01 MTR_0760s0010 27.869 305 138 9 22 273 52 327 1.14e-22 98.2
MsG0780039598.01.T01 MTR_3g030350 26.303 403 201 13 10 346 17 389 2.32e-22 97.4
MsG0780039598.01.T01 MTR_3g055000 40.278 144 65 5 205 346 1 125 2.96e-22 91.3
MsG0780039598.01.T01 MTR_2g046830 28.485 330 154 12 2 274 10 314 4.13e-22 96.7
MsG0780039598.01.T01 MTR_2g055970 26.912 353 185 15 7 305 201 534 4.14e-22 97.8
MsG0780039598.01.T01 MTR_3g009240 27.493 371 177 15 12 323 31 368 4.24e-22 96.7
MsG0780039598.01.T01 MTR_3g030330 28.889 360 166 12 2 305 5 330 4.25e-22 96.3
MsG0780039598.01.T01 MTR_1g097490 24.865 370 185 11 12 324 40 373 5.25e-22 96.3
MsG0780039598.01.T01 MTR_4g024910 28.750 320 164 12 35 346 1 264 1.21e-21 94.4
MsG0780039598.01.T01 MTR_3g011100 30.284 317 132 11 20 272 238 529 1.63e-21 96.3
MsG0780039598.01.T01 MTR_3g010390 26.963 382 183 14 12 323 28 383 1.65e-21 95.1
MsG0780039598.01.T01 MTR_7g445580 44.037 109 55 2 214 321 42 145 1.98e-21 89.4
MsG0780039598.01.T01 MTR_2g046900 28.135 327 149 12 5 268 16 319 3.06e-21 94.0
MsG0780039598.01.T01 MTR_3g083660 29.119 261 115 8 12 270 20 212 3.90e-21 92.0
MsG0780039598.01.T01 MTR_3g009260 28.177 362 171 15 12 317 36 364 4.30e-21 93.6
MsG0780039598.01.T01 MTR_3g013740 26.761 355 165 13 14 300 41 368 5.49e-21 93.6
MsG0780039598.01.T01 MTR_2g021210 26.301 365 188 11 1 317 68 399 5.77e-21 93.6
MsG0780039598.01.T01 MTR_3g036290 28.710 310 137 14 12 269 17 294 7.72e-21 92.4
MsG0780039598.01.T01 MTR_3g034130 28.308 325 154 11 13 275 5 312 9.91e-21 92.4
MsG0780039598.01.T01 MTR_1g054725 24.938 405 198 17 8 346 10 374 1.00e-20 92.4
MsG0780039598.01.T01 MTR_4g024870 30.916 262 106 11 19 215 46 297 1.10e-20 92.8
MsG0780039598.01.T01 MTR_3g006670 26.688 311 144 11 20 270 52 338 1.16e-20 92.8
MsG0780039598.01.T01 MTR_6g021880 26.440 382 184 13 29 346 32 380 1.51e-20 92.0
MsG0780039598.01.T01 MTR_3g014570 25.737 373 184 14 11 322 23 363 1.53e-20 92.0
MsG0780039598.01.T01 MTR_2g047832 27.523 327 173 12 6 274 18 338 2.31e-20 92.0
MsG0780039598.01.T01 MTR_6g004660 25.500 400 194 14 16 346 15 379 2.83e-20 91.3
MsG0780039598.01.T01 MTR_3g024110 27.507 349 151 15 20 306 104 412 4.03e-20 91.3
MsG0780039598.01.T01 MTR_3g007410 28.526 312 138 12 20 271 55 341 4.63e-20 90.9
MsG0780039598.01.T01 MTR_1g115160 26.225 408 196 18 1 346 1 365 5.02e-20 90.5
MsG0780039598.01.T01 MTR_5g057710 26.554 354 161 12 20 311 49 365 5.43e-20 90.5
MsG0780039598.01.T01 MTR_3g103020 28.421 380 190 18 20 348 23 371 6.88e-20 90.1
MsG0780039598.01.T01 MTR_7g089830 39.474 152 69 5 167 311 3 138 1.55e-19 84.3
MsG0780039598.01.T01 MTR_3g010970 29.305 331 134 14 20 288 51 343 1.86e-19 89.0
MsG0780039598.01.T01 MTR_3g036430 26.331 357 195 13 20 346 23 341 2.23e-19 88.2
MsG0780039598.01.T01 MTR_8g054320 29.740 269 142 8 3 270 17 239 2.25e-19 87.4
MsG0780039598.01.T01 MTR_4g023130 28.526 312 177 15 13 310 5 284 2.40e-19 87.8
MsG0780039598.01.T01 MTR_4g006840 29.218 243 95 5 20 212 2 217 2.41e-19 85.9
MsG0780039598.01.T01 MTR_8g433030 30.882 272 154 11 3 266 26 271 3.05e-19 87.8
MsG0780039598.01.T01 MTR_3g024150 28.289 304 132 10 20 265 38 313 4.28e-19 87.8
MsG0780039598.01.T01 MTR_7g062070 42.400 125 64 5 209 327 76 198 8.06e-19 84.0
MsG0780039598.01.T01 MTR_5g057790 27.331 311 139 14 20 270 49 332 1.17e-18 86.7
MsG0780039598.01.T01 MTR_3g010520 27.244 312 138 10 4 265 15 287 1.23e-18 86.3
MsG0780039598.01.T01 MTR_8g062660 27.077 325 129 10 13 262 18 309 1.52e-18 87.4
MsG0780039598.01.T01 MTR_2g021050 26.549 339 172 11 14 302 2 313 1.70e-18 86.3
MsG0780039598.01.T01 MTR_5g046260 25.926 297 126 12 20 270 7 255 2.20e-18 84.7
MsG0780039598.01.T01 MTR_3g030310 25.917 409 192 17 13 346 17 389 4.44e-18 85.1
MsG0780039598.01.T01 MTR_3g007430 26.462 359 165 14 20 317 46 366 5.48e-18 84.7
MsG0780039598.01.T01 MTR_4g117850 26.912 353 172 14 17 310 23 348 6.89e-18 84.3
MsG0780039598.01.T01 MTR_1g068835 26.012 346 173 14 17 306 4 322 1.43e-17 83.6
MsG0780039598.01.T01 MTR_1g058760 57.576 66 26 1 15 78 9 74 2.20e-17 76.6
MsG0780039598.01.T01 MTR_3g010590 26.074 349 157 13 12 301 34 340 2.39e-17 82.8
MsG0780039598.01.T01 MTR_3g007330 26.710 307 141 9 20 270 51 329 2.63e-17 82.8
MsG0780039598.01.T01 MTR_4g133170 26.000 350 170 16 15 306 2 320 3.45e-17 82.4
MsG0780039598.01.T01 MTR_0354s0030 42.000 100 48 2 253 347 1 95 3.84e-17 76.3
MsG0780039598.01.T01 MTR_1g055375 25.255 392 195 15 20 346 7 365 7.14e-17 81.3
MsG0780039598.01.T01 MTR_1g046600 55.128 78 32 1 239 313 229 306 7.47e-17 80.5
MsG0780039598.01.T01 MTR_4g023080 26.984 378 169 18 13 323 5 342 8.19e-17 80.9
MsG0780039598.01.T01 MTR_3g010920 26.316 304 138 9 11 265 41 307 2.54e-16 79.7
MsG0780039598.01.T01 MTR_6g048150 42.000 100 46 3 250 344 13 105 2.85e-16 75.1
MsG0780039598.01.T01 MTR_3g055070 39.130 115 53 4 205 317 1 100 1.15e-15 73.9
MsG0780039598.01.T01 MTR_7g021580 31.222 221 100 7 17 192 33 246 2.25e-15 76.3
MsG0780039598.01.T01 MTR_7g021580 44.681 94 40 3 254 346 217 299 2.10e-14 73.2
MsG0780039598.01.T01 MTR_7g055850 67.241 58 18 1 14 71 10 66 2.89e-15 75.5
MsG0780039598.01.T01 MTR_7g407070 30.594 219 109 12 97 300 172 362 4.22e-15 76.3
MsG0780039598.01.T01 MTR_2g046800 29.508 244 131 11 107 346 185 391 5.22e-15 75.9
MsG0780039598.01.T01 MTR_2g078870 29.389 262 136 12 93 346 86 306 8.61e-15 74.3
MsG0780039598.01.T01 MTR_3g010870 27.237 257 140 8 12 265 32 244 1.43e-14 73.9
MsG0780039598.01.T01 MTR_1g097510 26.667 195 112 7 132 320 82 251 2.59e-14 72.8
MsG0780039598.01.T01 MTR_5g046280 28.916 166 93 6 106 270 47 188 3.31e-14 72.0
MsG0780039598.01.T01 MTR_6g007150 27.863 262 142 10 97 346 110 336 7.71e-14 72.0
MsG0780039598.01.T01 MTR_8g069515 61.818 55 20 1 17 71 16 69 9.13e-14 69.3
MsG0780039598.01.T01 MTR_3g436150 29.126 206 106 9 105 300 181 356 1.27e-13 71.6
MsG0780039598.01.T01 MTR_3g007270 28.155 206 107 10 106 304 201 372 1.51e-13 71.6
MsG0780039598.01.T01 MTR_1g055165 28.782 271 153 9 17 274 10 253 2.44e-13 70.5
MsG0780039598.01.T01 MTR_3g006640 26.147 218 115 8 105 301 56 248 2.51e-13 70.1
MsG0780039598.01.T01 MTR_1004s0010 26.442 208 112 7 79 273 118 297 2.62e-13 70.5
MsG0780039598.01.T01 MTR_7g058660 38.462 104 53 2 246 343 112 210 2.73e-13 68.6
MsG0780039598.01.T01 MTR_6g007135 28.846 208 124 7 97 301 165 351 2.74e-13 70.9
MsG0780039598.01.T01 MTR_7g056373 64.583 48 17 0 14 61 19 66 3.55e-13 66.2
MsG0780039598.01.T01 MTR_3g030320 29.412 170 87 8 105 270 89 229 3.79e-13 69.7
MsG0780039598.01.T01 MTR_2g025960 27.094 203 119 7 104 303 67 243 4.08e-13 69.7
MsG0780039598.01.T01 MTR_4g063955 57.895 57 24 0 6 62 16 72 5.79e-13 68.6
MsG0780039598.01.T01 MTR_2g426070 26.230 244 144 8 107 347 167 377 6.12e-13 69.7
MsG0780039598.01.T01 MTR_7g060930 49.231 65 32 1 189 252 10 74 1.32e-12 63.2
MsG0780039598.01.T01 MTR_4g089125 53.333 60 27 1 13 72 8 66 1.47e-12 63.5
MsG0780039598.01.T01 MTR_0064s0060 48.438 64 33 0 1 64 1 64 1.55e-12 64.7
MsG0780039598.01.T01 MTR_5g070080 32.000 175 95 8 106 275 167 322 1.90e-12 68.2
MsG0780039598.01.T01 MTR_7g057090 52.381 63 28 2 1 61 1 63 2.14e-12 63.2
MsG0780039598.01.T01 MTR_6g027910 30.939 181 86 7 91 265 160 307 2.18e-12 67.8
MsG0780039598.01.T01 MTR_6g460450 65.217 46 16 0 16 61 28 73 3.19e-12 63.9
MsG0780039598.01.T01 MTR_2g028130 27.559 254 140 11 107 347 165 387 3.30e-12 67.4
MsG0780039598.01.T01 MTR_3g096280 23.885 381 171 12 29 346 17 341 3.37e-12 67.0
MsG0780039598.01.T01 MTR_5g007610 30.409 171 93 6 106 270 188 338 3.54e-12 67.4
MsG0780039598.01.T01 MTR_4g132560 26.772 254 143 9 104 346 36 257 4.49e-12 65.9
MsG0780039598.01.T01 MTR_3g006570 25.000 236 120 10 106 324 163 358 5.23e-12 66.6
MsG0780039598.01.T01 MTR_5g056990 27.404 208 115 8 107 311 36 210 6.01e-12 65.1
MsG0780039598.01.T01 MTR_6g013270 29.268 164 96 5 105 268 175 318 6.23e-12 66.6
MsG0780039598.01.T01 MTR_3g011060 28.085 235 120 13 97 317 167 366 6.24e-12 66.6
MsG0780039598.01.T01 MTR_3g083010 26.699 206 114 7 108 303 171 349 6.27e-12 66.6
MsG0780039598.01.T01 MTR_2g028160 27.734 256 138 12 107 347 165 388 1.43e-11 65.5
MsG0780039598.01.T01 MTR_6g060650 24.183 306 151 11 30 273 21 307 1.57e-11 65.5
MsG0780039598.01.T01 MTR_5g009060 31.818 176 87 9 102 265 185 339 1.76e-11 65.1
MsG0780039598.01.T01 MTR_4g070550 28.571 203 116 8 107 302 163 343 2.05e-11 65.1
MsG0780039598.01.T01 MTR_2g043420 60.870 46 18 0 16 61 25 70 2.55e-11 62.0
MsG0780039598.01.T01 MTR_2g010930 54.237 59 27 0 4 62 157 215 2.62e-11 63.2
MsG0780039598.01.T01 MTR_7g056787 58.000 50 21 0 13 62 79 128 2.78e-11 61.6
MsG0780039598.01.T01 MTR_8g099460 27.841 176 95 7 103 268 148 301 3.00e-11 64.7
MsG0780039598.01.T01 MTR_3g030240 27.673 159 78 4 107 265 184 305 3.60e-11 64.3
MsG0780039598.01.T01 MTR_2g025420 26.887 212 113 8 107 304 168 351 3.77e-11 64.3
MsG0780039598.01.T01 MTR_3g030250 26.667 165 83 6 104 265 178 307 6.98e-11 63.5
MsG0780039598.01.T01 MTR_5g070088 25.962 208 133 5 82 284 139 330 9.01e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039598.01.T01 AT3G23880 25.405 370 173 13 20 319 17 353 1.16e-14 74.7

Find 63 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAAGCAGGATCGGAAATT+AGG 0.146379 7:+66477368 None:intergenic
GATCCTGATAACTAAGTTTA+AGG 0.183767 7:+66476480 None:intergenic
TTGAAGCTAAAATTGTTTAA+TGG 0.212811 7:+66476977 None:intergenic
GTTCCTTAAACTTAGTTATC+AGG 0.239856 7:-66476483 MsG0780039598.01.T01:CDS
CAGAAGCAATTATCTGTAAT+TGG 0.253678 7:-66476355 MsG0780039598.01.T01:CDS
CCCTGTTGTTCCGCTTCATT+TGG 0.285107 7:-66476825 MsG0780039598.01.T01:CDS
TATGGAAGATGATGACATTT+GGG 0.285218 7:-66476526 MsG0780039598.01.T01:CDS
ATATCTCTCCAAACATTATC+AGG 0.325700 7:+66476857 None:intergenic
GAACCAACTGTTCGTGTGTT+GGG 0.331281 7:-66476593 MsG0780039598.01.T01:CDS
TCATTTGGACAGTGTTCATT+TGG 0.346495 7:-66476810 MsG0780039598.01.T01:CDS
CGATGCAACCGACACTTATA+AGG 0.347034 7:-66476942 MsG0780039598.01.T01:CDS
TCCAAATGAAGCGGAACAAC+AGG 0.369036 7:+66476824 None:intergenic
GGAACAGGATTCGAGAATTC+TGG 0.374993 7:+66477282 None:intergenic
GAAAGCAGGATCGGAAATTA+GGG 0.377076 7:+66477369 None:intergenic
GGAACTTACTATGAAACAAT+TGG 0.392345 7:+66476236 None:intergenic
TCAGATGTGTCAACAAATCT+TGG 0.396480 7:-66477396 MsG0780039598.01.T01:CDS
CATCTTCCATATAACAAAAT+CGG 0.400470 7:+66476538 None:intergenic
GTCGAGTACAAAACTGAGTT+CGG 0.421828 7:+66477258 None:intergenic
TTAGTTTGCCTGATAATGTT+TGG 0.427230 7:-66476865 MsG0780039598.01.T01:CDS
ATATGGAAGATGATGACATT+TGG 0.431312 7:-66476527 MsG0780039598.01.T01:CDS
TGACTACGAAACTTTGCAAT+TGG 0.435143 7:-66476435 MsG0780039598.01.T01:CDS
CATTTGGGGTTGAAGATTCG+TGG 0.439493 7:-66476511 MsG0780039598.01.T01:CDS
TCGAGTACAAAACTGAGTTC+GGG 0.440601 7:+66477259 None:intergenic
CAAAGTTTCGTAGTCACTAA+AGG 0.446809 7:+66476442 None:intergenic
TAAGAGAAACAATAACAAAC+TGG 0.460188 7:+66476681 None:intergenic
AGATGTAATTTCACGAAAGC+AGG 0.468286 7:+66477355 None:intergenic
GGTGCCGTTGCTTCTTTATG+AGG 0.479275 7:-66476414 MsG0780039598.01.T01:CDS
AACCAACTGTTCGTGTGTTG+GGG 0.484029 7:-66476592 MsG0780039598.01.T01:CDS
CCGTTGCTTCTTTATGAGGA+TGG 0.495740 7:-66476410 MsG0780039598.01.T01:CDS
TACCTCTACGATGAGATCTT+CGG 0.500351 7:+66477453 None:intergenic
AATTGGAGAGATGGTAAAGT+AGG 0.504087 7:-66476338 MsG0780039598.01.T01:CDS
GGTGGCATTCCGTTACAATC+CGG 0.536900 7:-66476918 MsG0780039598.01.T01:CDS
ATTATCTGTAATTGGAGAGA+TGG 0.537459 7:-66476347 MsG0780039598.01.T01:CDS
ATTGGAGAGATGGTAAAGTA+GGG 0.545882 7:-66476337 MsG0780039598.01.T01:CDS
AGAACCAACTGTTCGTGTGT+TGG 0.555721 7:-66476594 MsG0780039598.01.T01:CDS
CGCGTGGCAGCATGAACTGA+TGG 0.563569 7:+66476639 None:intergenic
CGAACAGTTGGTTCTACTAA+CGG 0.579792 7:+66476602 None:intergenic
ATTGATGTTCCGGATTGTAA+CGG 0.581028 7:+66476909 None:intergenic
GCTAAGCGTTGTATGTATGC+TGG 0.590311 7:-66476782 MsG0780039598.01.T01:CDS
TAATTTCACGAAAGCAGGAT+CGG 0.591003 7:+66477360 None:intergenic
TCGGAGAGAACCGCCGTCGT+CGG 0.595469 7:+66477472 None:intergenic
GTCTATGATTCCGACGACGG+CGG 0.598297 7:-66477482 MsG0780039598.01.T01:CDS
GTAAAGACAATACTACATGC+TGG 0.599959 7:-66476292 MsG0780039598.01.T01:CDS
TAAGCTTTCAACATAGTCCA+TGG 0.603588 7:+66476262 None:intergenic
TACATGCTGGTACTCGACCA+TGG 0.604476 7:-66476279 MsG0780039598.01.T01:CDS
TATGCTGGTGTGTATTTGAG+TGG 0.604748 7:-66476767 MsG0780039598.01.T01:CDS
TGAACACTGTCCAAATGAAG+CGG 0.610293 7:+66476815 None:intergenic
AACCGACACTTATAAGGTGG+TGG 0.611134 7:-66476936 MsG0780039598.01.T01:CDS
TGCCACCACCTTATAAGTGT+CGG 0.611939 7:+66476934 None:intergenic
TGTTTCTCTTAATCTGACGA+CGG 0.620939 7:-66476669 MsG0780039598.01.T01:CDS
ACCAACTGTTCGTGTGTTGG+GGG 0.625719 7:-66476591 MsG0780039598.01.T01:CDS
CCATCCTCATAAAGAAGCAA+CGG 0.628276 7:+66476410 None:intergenic
CCAAATGAAGCGGAACAACA+GGG 0.630940 7:+66476825 None:intergenic
CTCCGAAGATCTCATCGTAG+AGG 0.636737 7:-66477455 MsG0780039598.01.T01:CDS
CGAGTACAAAACTGAGTTCG+GGG 0.652620 7:+66477260 None:intergenic
ATGGAAGATGATGACATTTG+GGG 0.656408 7:-66476525 MsG0780039598.01.T01:CDS
TGCAACCGACACTTATAAGG+TGG 0.661036 7:-66476939 MsG0780039598.01.T01:CDS
TCAGTCTATGATTCCGACGA+CGG 0.662690 7:-66477485 MsG0780039598.01.T01:CDS
CCAACTGTTCGTGTGTTGGG+GGG 0.676232 7:-66476590 MsG0780039598.01.T01:CDS
CGTCGGAATCATAGACTGAG+TGG 0.679177 7:+66477489 None:intergenic
GGCACTTCATCAAACTCGCG+TGG 0.688289 7:+66476623 None:intergenic
GAGTACAAAACTGAGTTCGG+GGG 0.736244 7:+66477261 None:intergenic
AGCGTGACTAGTGTGCATAG+CGG 0.760215 7:+66477310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAGCTAAAATTGTTTAA+TGG + Chr7:66476775-66476794 None:intergenic 20.0%
! AACTATTACTAGAATATCGT+TGG - Chr7:66476604-66476623 MsG0780039598.01.T01:CDS 25.0%
! CATCTTCCATATAACAAAAT+CGG + Chr7:66477214-66477233 None:intergenic 25.0%
! TAAGAGAAACAATAACAAAC+TGG + Chr7:66477071-66477090 None:intergenic 25.0%
!!! AACAATTTTAGCTTCAACTT+TGG - Chr7:66476778-66476797 MsG0780039598.01.T01:CDS 25.0%
ATATCTCTCCAAACATTATC+AGG + Chr7:66476895-66476914 None:intergenic 30.0%
ATATGGAAGATGATGACATT+TGG - Chr7:66477222-66477241 MsG0780039598.01.T01:intron 30.0%
ATGGATTCTGAATTAAACTG+TGG + Chr7:66476546-66476565 None:intergenic 30.0%
ATTATCTGTAATTGGAGAGA+TGG - Chr7:66477402-66477421 MsG0780039598.01.T01:CDS 30.0%
ATTCTGAATTAAACTGTGGA+TGG + Chr7:66476542-66476561 None:intergenic 30.0%
CAGAAGCAATTATCTGTAAT+TGG - Chr7:66477394-66477413 MsG0780039598.01.T01:CDS 30.0%
CCTTAGAATAAGAAAAACAC+AGG + Chr7:66477188-66477207 None:intergenic 30.0%
GATCCTGATAACTAAGTTTA+AGG + Chr7:66477272-66477291 None:intergenic 30.0%
GTTCCTTAAACTTAGTTATC+AGG - Chr7:66477266-66477285 MsG0780039598.01.T01:CDS 30.0%
TATGGAAGATGATGACATTT+GGG - Chr7:66477223-66477242 MsG0780039598.01.T01:intron 30.0%
! AATCGAAGAAGAGATTTTAC+TGG + Chr7:66476334-66476353 None:intergenic 30.0%
! ATTTGAGTGGCTCTTTTAAT+TGG - Chr7:66476995-66477014 MsG0780039598.01.T01:intron 30.0%
! CCTGTGTTTTTCTTATTCTA+AGG - Chr7:66477185-66477204 MsG0780039598.01.T01:intron 30.0%
! TCACTTTCACTATGATTTTG+AGG - Chr7:66477032-66477051 MsG0780039598.01.T01:intron 30.0%
!! TCACTTTTGAATTGATGTTC+CGG + Chr7:66476853-66476872 None:intergenic 30.0%
!! TTAGTTTGCCTGATAATGTT+TGG - Chr7:66476884-66476903 MsG0780039598.01.T01:CDS 30.0%
AAAACAACAGTAACGCTTGA+TGG + Chr7:66476581-66476600 None:intergenic 35.0%
AAATGTCTTAATTGTCCTGG+TGG + Chr7:66476722-66476741 None:intergenic 35.0%
AATTGGAGAGATGGTAAAGT+AGG - Chr7:66477411-66477430 MsG0780039598.01.T01:CDS 35.0%
AGATGTAATTTCACGAAAGC+AGG + Chr7:66476397-66476416 None:intergenic 35.0%
ATCATGAGTATATAGAGTCC+TGG - Chr7:66476677-66476696 MsG0780039598.01.T01:CDS 35.0%
ATGGAAGATGATGACATTTG+GGG - Chr7:66477224-66477243 MsG0780039598.01.T01:intron 35.0%
ATTAAACTGTGGATGGAGTA+CGG + Chr7:66476535-66476554 None:intergenic 35.0%
ATTGATGTTCCGGATTGTAA+CGG + Chr7:66476843-66476862 None:intergenic 35.0%
ATTGGAGAGATGGTAAAGTA+GGG - Chr7:66477412-66477431 MsG0780039598.01.T01:CDS 35.0%
CAAAGTTTCGTAGTCACTAA+AGG + Chr7:66477310-66477329 None:intergenic 35.0%
CTGAAATGTCTTAATTGTCC+TGG + Chr7:66476725-66476744 None:intergenic 35.0%
GTAAAGACAATACTACATGC+TGG - Chr7:66477457-66477476 MsG0780039598.01.T01:CDS 35.0%
TAAGCTTTCAACATAGTCCA+TGG + Chr7:66477490-66477509 None:intergenic 35.0%
TAATTTCACGAAAGCAGGAT+CGG + Chr7:66476392-66476411 None:intergenic 35.0%
TCAGATGTGTCAACAAATCT+TGG - Chr7:66476353-66476372 MsG0780039598.01.T01:CDS 35.0%
TCATTTGGACAGTGTTCATT+TGG - Chr7:66476939-66476958 MsG0780039598.01.T01:CDS 35.0%
TGACTACGAAACTTTGCAAT+TGG - Chr7:66477314-66477333 MsG0780039598.01.T01:CDS 35.0%
TGTTTCTCTTAATCTGACGA+CGG - Chr7:66477080-66477099 MsG0780039598.01.T01:intron 35.0%
! GAAGAAGAGATTTTACTGGA+AGG + Chr7:66476330-66476349 None:intergenic 35.0%
! TTTCAGTGTTTTCCTGATTG+TGG - Chr7:66476739-66476758 MsG0780039598.01.T01:CDS 35.0%
!! AATATCGTTGGTTCTTGCAA+TGG - Chr7:66476616-66476635 MsG0780039598.01.T01:CDS 35.0%
AACAGTAACGCTTGATGGAA+AGG + Chr7:66476576-66476595 None:intergenic 40.0%
ACAGTAACGCTTGATGGAAA+GGG + Chr7:66476575-66476594 None:intergenic 40.0%
CCATCCTCATAAAGAAGCAA+CGG + Chr7:66477342-66477361 None:intergenic 40.0%
GAAAGCAGGATCGGAAATTA+GGG + Chr7:66476383-66476402 None:intergenic 40.0%
GTCGAGTACAAAACTGAGTT+CGG + Chr7:66476494-66476513 None:intergenic 40.0%
TACCTCTACGATGAGATCTT+CGG + Chr7:66476299-66476318 None:intergenic 40.0%
TATGCTGGTGTGTATTTGAG+TGG - Chr7:66476982-66477001 MsG0780039598.01.T01:CDS 40.0%
TCGAGTACAAAACTGAGTTC+GGG + Chr7:66476493-66476512 None:intergenic 40.0%
TGAACACTGTCCAAATGAAG+CGG + Chr7:66476937-66476956 None:intergenic 40.0%
TTGATGGAAAGGGTGAATGA+TGG + Chr7:66476565-66476584 None:intergenic 40.0%
!! CGAACAGTTGGTTCTACTAA+CGG + Chr7:66477150-66477169 None:intergenic 40.0%
!! CTCAGTTTTGTACTCGACTA+TGG - Chr7:66476496-66476515 MsG0780039598.01.T01:CDS 40.0%
!! GAGTGGCTCTTTTAATTGGT+TGG - Chr7:66476999-66477018 MsG0780039598.01.T01:intron 40.0%
!!! AGGACGCCGATTTTGTTATA+TGG - Chr7:66477205-66477224 MsG0780039598.01.T01:intron 40.0%
AACCAACTGTTCGTGTGTTG+GGG - Chr7:66477157-66477176 MsG0780039598.01.T01:intron 45.0%
AACCGACACTTATAAGGTGG+TGG - Chr7:66476813-66476832 MsG0780039598.01.T01:CDS 45.0%
AGAACCAACTGTTCGTGTGT+TGG - Chr7:66477155-66477174 MsG0780039598.01.T01:intron 45.0%
CCAAATGAAGCGGAACAACA+GGG + Chr7:66476927-66476946 None:intergenic 45.0%
CCGTTGCTTCTTTATGAGGA+TGG - Chr7:66477339-66477358 MsG0780039598.01.T01:CDS 45.0%
CGAAAGCAGGATCGGAAATT+AGG + Chr7:66476384-66476403 None:intergenic 45.0%
CGAGTACAAAACTGAGTTCG+GGG + Chr7:66476492-66476511 None:intergenic 45.0%
CGATGCAACCGACACTTATA+AGG - Chr7:66476807-66476826 MsG0780039598.01.T01:CDS 45.0%
GAACCAACTGTTCGTGTGTT+GGG - Chr7:66477156-66477175 MsG0780039598.01.T01:intron 45.0%
GAGTACAAAACTGAGTTCGG+GGG + Chr7:66476491-66476510 None:intergenic 45.0%
GGAACAGGATTCGAGAATTC+TGG + Chr7:66476470-66476489 None:intergenic 45.0%
TAGAGTCCTGGCTCCATTTA+TGG - Chr7:66476689-66476708 MsG0780039598.01.T01:CDS 45.0%
TCAGTCTATGATTCCGACGA+CGG - Chr7:66476264-66476283 MsG0780039598.01.T01:CDS 45.0%
TCCAAATGAAGCGGAACAAC+AGG + Chr7:66476928-66476947 None:intergenic 45.0%
TCTTAATTGTCCTGGTGGCT+GGG + Chr7:66476717-66476736 None:intergenic 45.0%
TGCAACCGACACTTATAAGG+TGG - Chr7:66476810-66476829 MsG0780039598.01.T01:CDS 45.0%
TGCCACCACCTTATAAGTGT+CGG + Chr7:66476818-66476837 None:intergenic 45.0%
! CATTTGGGGTTGAAGATTCG+TGG - Chr7:66477238-66477257 MsG0780039598.01.T01:CDS 45.0%
! GCTAAGCGTTGTATGTATGC+TGG - Chr7:66476967-66476986 MsG0780039598.01.T01:CDS 45.0%
AAAACTGAGTTCGGGGGAAC+AGG + Chr7:66476485-66476504 None:intergenic 50.0%
ACCAACTGTTCGTGTGTTGG+GGG - Chr7:66477158-66477177 MsG0780039598.01.T01:intron 50.0%
AGCGTGACTAGTGTGCATAG+CGG + Chr7:66476442-66476461 None:intergenic 50.0%
ATTTATGGAACCCAGCCACC+AGG - Chr7:66476704-66476723 MsG0780039598.01.T01:CDS 50.0%
CCCTGTTGTTCCGCTTCATT+TGG - Chr7:66476924-66476943 MsG0780039598.01.T01:CDS 50.0%
CGTCGGAATCATAGACTGAG+TGG + Chr7:66476263-66476282 None:intergenic 50.0%
CTCCGAAGATCTCATCGTAG+AGG - Chr7:66476294-66476313 MsG0780039598.01.T01:CDS 50.0%
GGAGATCTTCTGCCACAATC+AGG + Chr7:66476754-66476773 None:intergenic 50.0%
GGTGGCATTCCGTTACAATC+CGG - Chr7:66476831-66476850 MsG0780039598.01.T01:CDS 50.0%
GTCTTAATTGTCCTGGTGGC+TGG + Chr7:66476718-66476737 None:intergenic 50.0%
TACATGCTGGTACTCGACCA+TGG - Chr7:66477470-66477489 MsG0780039598.01.T01:CDS 50.0%
TGGGTTCCATAAATGGAGCC+AGG + Chr7:66476698-66476717 None:intergenic 50.0%
TGGTGGCTGGGTTCCATAAA+TGG + Chr7:66476705-66476724 None:intergenic 50.0%
!! GGTGCCGTTGCTTCTTTATG+AGG - Chr7:66477335-66477354 MsG0780039598.01.T01:CDS 50.0%
CCAACTGTTCGTGTGTTGGG+GGG - Chr7:66477159-66477178 MsG0780039598.01.T01:intron 55.0%
GGCACTTCATCAAACTCGCG+TGG + Chr7:66477129-66477148 None:intergenic 55.0%
GTCTATGATTCCGACGACGG+CGG - Chr7:66476267-66476286 MsG0780039598.01.T01:CDS 55.0%
CCCCCCAACACACGAACAGT+TGG + Chr7:66477162-66477181 None:intergenic 60.0%
CGCGTGGCAGCATGAACTGA+TGG + Chr7:66477113-66477132 None:intergenic 60.0%
TCGGAGAGAACCGCCGTCGT+CGG + Chr7:66476280-66476299 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 66476244 66477527 66476244 ID=MsG0780039598.01;Name=MsG0780039598.01
Chr7 mRNA 66476244 66477527 66476244 ID=MsG0780039598.01.T01;Parent=MsG0780039598.01;Name=MsG0780039598.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|350
Chr7 exon 66477238 66477527 66477238 ID=MsG0780039598.01.T01:exon:8839;Parent=MsG0780039598.01.T01
Chr7 exon 66476244 66477006 66476244 ID=MsG0780039598.01.T01:exon:8838;Parent=MsG0780039598.01.T01
Chr7 CDS 66477238 66477527 66477238 ID=MsG0780039598.01.T01:cds;Parent=MsG0780039598.01.T01
Chr7 CDS 66476244 66477006 66476244 ID=MsG0780039598.01.T01:cds;Parent=MsG0780039598.01.T01
Gene Sequence

>MsG0780039598.01.T01

ATGAACAAGAAATCAACCACTCAGTCTATGATTCCGACGACGGCGGTTCTCTCCGAAGATCTCATCGTAGAGGTACTCTCTTTCCTTCCAGTAAAATCTCTTCTTCGATTCAGATGTGTCAACAAATCTTGGAAAACCCTAATTTCCGATCCTGCTTTCGTGAAATTACATCTCAATAGATCAGCAACACGAGATCCGCTATGCACACTAGTCACGCTTCACACCAGAATTCTCGAATCCTGTTCCCCCGAACTCAGTTTTGTACTCGACTATGGTTACAGTATCGTTCCAAGATCTCCATTAAACAATTTTAGCTTCAACTTTGGTTTTGACGATGCAACCGACACTTATAAGGTGGTGGCATTCCGTTACAATCCGGAACATCAATTCAAAAGTGAAGTCAAAATTGTTAGTTTGCCTGATAATGTTTGGAGAGATATTGAAAGTTTCCCTGTTGTTCCGCTTCATTTGGACAGTGTTCATTTGGACGATGCTAAGCGTTGTATGTATGCTGGTGTGTATTTGAGTGGCTCTTTTAATTGGTTGGCTATTCACAATCACTTTCACTATGATTTTGAGGATATTGAAGTTGACCAGTTTGTTATTGTTTCTCTTAATCTGACGACGGAGACATACCATCAGTTCATGCTGCCACGCGAGTTTGATGAAGTGCCGTTAGTAGAACCAACTGTTCGTGTGTTGGGGGGTTGCCTGTGTTTTTCTTATTCTAAGGACGCCGATTTTGTTATATGGAAGATGATGACATTTGGGGTTGAAGATTCGTGGACTCAGTTCCTTAAACTTAGTTATCAGGATCTTCTGATAGATTCTACCTTTAGTGACTACGAAACTTTGCAATTGGTGCCGTTGCTTCTTTATGAGGATGGTGATACACTAATACTTAAGAGCAATGATGAAACAGAAGCAATTATCTGTAATTGGAGAGATGGTAAAGTAGGGCGAACAGAAATTACTACAAAGAGTAAAGACAATACTACATGCTGGTACTCGACCATGGACTATGTTGAAAGCTTAGTTCCAATTGTTTCATAG
Protein sequence

>MsG0780039598.01.T01

MNKKSTTQSMIPTTAVLSEDLIVEVLSFLPVKSLLRFRCVNKSWKTLISDPAFVKLHLNRSATRDPLCTLVTLHTRILESCSPELSFVLDYGYSIVPRSPLNNFSFNFGFDDATDTYKVVAFRYNPEHQFKSEVKIVSLPDNVWRDIESFPVVPLHLDSVHLDDAKRCMYAGVYLSGSFNWLAIHNHFHYDFEDIEVDQFVIVSLNLTTETYHQFMLPREFDEVPLVEPTVRVLGGCLCFSYSKDADFVIWKMMTFGVEDSWTQFLKLSYQDLLIDSTFSDYETLQLVPLLLYEDGDTLILKSNDETEAIICNWRDGKVGRTEITTKSKDNTTCWYSTMDYVESLVPIVS*