Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021370.01.T01 | XP_003607131.1 | 90.805 | 87 | 8 | 0 | 79 | 165 | 1 | 87 | 1.47E-50 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021370.01.T01 | P33080 | 73.626 | 91 | 17 | 2 | 79 | 163 | 1 | 90 | 3.38E-41 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021370.01.T01 | G7JL53 | 90.805 | 87 | 8 | 0 | 79 | 165 | 1 | 87 | 7.03e-51 | 167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0480021370.01 | 0.812221 | 4.727242e-51 | 2.988338e-48 |
| MsG0080049040.01 | MsG0480021370.01 | 0.818989 | 1.469581e-52 | 1.117042e-49 |
| MsG0080049068.01 | MsG0480021370.01 | 0.823564 | 1.294134e-53 | 1.118261e-50 |
| MsG0180000785.01 | MsG0480021370.01 | 0.801739 | 7.812897e-49 | 3.759415e-46 |
| MsG0180001064.01 | MsG0480021370.01 | 0.802951 | 4.396911e-49 | 2.182101e-46 |
| MsG0180001085.01 | MsG0480021370.01 | 0.817819 | 2.705062e-52 | 1.990703e-49 |
| MsG0180001100.01 | MsG0480021370.01 | 0.803557 | 3.292955e-49 | 1.659978e-46 |
| MsG0180001270.01 | MsG0480021370.01 | 0.834216 | 3.406484e-56 | 4.015565e-53 |
| MsG0180001371.01 | MsG0480021370.01 | 0.813572 | 2.391387e-51 | 1.567373e-48 |
| MsG0180002399.01 | MsG0480021370.01 | 0.814857 | 1.244569e-51 | 8.445617e-49 |
| MsG0180003906.01 | MsG0480021370.01 | 0.823029 | 1.725546e-53 | 1.468789e-50 |
| MsG0180004246.01 | MsG0480021370.01 | 0.811539 | 6.657389e-51 | 4.131967e-48 |
| MsG0180004735.01 | MsG0480021370.01 | 0.806102 | 9.682473e-50 | 5.210502e-47 |
| MsG0180004934.01 | MsG0480021370.01 | 0.811535 | 6.669009e-51 | 4.138859e-48 |
| MsG0180005039.01 | MsG0480021370.01 | 0.801473 | 8.858109e-49 | 4.234037e-46 |
| MsG0180005391.01 | MsG0480021370.01 | 0.806835 | 6.782127e-50 | 3.718933e-47 |
| MsG0180005750.01 | MsG0480021370.01 | 0.810581 | 1.073683e-50 | 6.496649e-48 |
| MsG0180005807.01 | MsG0480021370.01 | 0.816759 | 4.687058e-52 | 3.350481e-49 |
| MsG0280010564.01 | MsG0480021370.01 | 0.800648 | 1.305899e-48 | 6.113177e-46 |
| MsG0280010569.01 | MsG0480021370.01 | 0.810919 | 9.072568e-51 | 5.539875e-48 |
| MsG0280010975.01 | MsG0480021370.01 | 0.820657 | 6.110114e-53 | 4.863614e-50 |
| MsG0380014909.01 | MsG0480021370.01 | 0.806302 | 8.785970e-50 | 4.752305e-47 |
| MsG0480019751.01 | MsG0480021370.01 | 0.804317 | 2.288949e-49 | 1.176515e-46 |
| MsG0480019971.01 | MsG0480021370.01 | 0.836793 | 7.597369e-57 | 9.677372e-54 |
| MsG0480020408.01 | MsG0480021370.01 | 0.816764 | 4.673453e-52 | 3.341275e-49 |
| MsG0480020690.01 | MsG0480021370.01 | 0.819046 | 1.426203e-52 | 1.085711e-49 |
| MsG0480020890.01 | MsG0480021370.01 | 0.807088 | 5.994537e-50 | 3.308548e-47 |
| MsG0480021168.01 | MsG0480021370.01 | 0.808873 | 2.499886e-50 | 1.445726e-47 |
| MsG0480021294.01 | MsG0480021370.01 | 0.831764 | 1.387438e-55 | 1.520447e-52 |
| MsG0480021363.01 | MsG0480021370.01 | 0.806609 | 7.571016e-50 | 4.127185e-47 |
| MsG0480021369.01 | MsG0480021370.01 | 0.831912 | 1.275265e-55 | 1.403648e-52 |
| MsG0480021370.01 | MsG0480021377.01 | 0.822148 | 2.765558e-53 | 2.295647e-50 |
| MsG0480021370.01 | MsG0480021381.01 | 0.805303 | 1.424477e-49 | 7.510166e-47 |
| MsG0480021370.01 | MsG0480022537.01 | 0.824358 | 8.428716e-54 | 7.448492e-51 |
| MsG0480021370.01 | MsG0480023216.01 | 0.821644 | 3.618823e-53 | 2.961130e-50 |
| MsG0480021370.01 | MsG0480023314.01 | 0.804027 | 2.630817e-49 | 1.342240e-46 |
| MsG0480021370.01 | MsG0480023578.01 | 0.802676 | 5.010190e-49 | 2.469152e-46 |
| MsG0480021370.01 | MsG0480023992.01 | 0.828978 | 6.655580e-55 | 6.719496e-52 |
| MsG0480021370.01 | MsG0580024759.01 | 0.814433 | 1.544414e-51 | 1.036198e-48 |
| MsG0480021370.01 | MsG0580024873.01 | 0.822632 | 2.135442e-53 | 1.797419e-50 |
| MsG0480021370.01 | MsG0580027394.01 | 0.805164 | 1.523633e-49 | 8.004240e-47 |
| MsG0480021370.01 | MsG0580028024.01 | 0.832480 | 9.228495e-56 | 1.032796e-52 |
| MsG0480021370.01 | MsG0580028335.01 | 0.804877 | 1.749578e-49 | 9.124543e-47 |
| MsG0480021370.01 | MsG0580029414.01 | 0.821907 | 3.145476e-53 | 2.593222e-50 |
| MsG0480021370.01 | MsG0580029529.01 | 0.838886 | 2.202339e-57 | 2.990339e-54 |
| MsG0480021370.01 | MsG0580029912.01 | 0.808721 | 2.694968e-50 | 1.552236e-47 |
| MsG0480021370.01 | MsG0680030680.01 | 0.815017 | 1.146772e-51 | 7.815891e-49 |
| MsG0480021370.01 | MsG0680030858.01 | 0.804601 | 1.997261e-49 | 1.034126e-46 |
| MsG0480021370.01 | MsG0680033377.01 | 0.806416 | 8.313470e-50 | 4.509702e-47 |
| MsG0480021370.01 | MsG0680034064.01 | 0.822985 | 1.766927e-53 | 1.502121e-50 |
| MsG0480021370.01 | MsG0680034766.01 | 0.806238 | 9.063152e-50 | 4.894443e-47 |
| MsG0480021370.01 | MsG0680035731.01 | 0.808605 | 2.852366e-50 | 1.637993e-47 |
| MsG0480021370.01 | MsG0780036443.01 | 0.828921 | 6.870052e-55 | 6.924818e-52 |
| MsG0480021370.01 | MsG0780038784.01 | 0.807264 | 5.502478e-50 | 3.051052e-47 |
| MsG0480021370.01 | MsG0780039675.01 | 0.811137 | 8.136013e-51 | 4.996532e-48 |
| MsG0480021370.01 | MsG0780039975.01 | 0.819067 | 1.411100e-52 | 1.074751e-49 |
| MsG0480021370.01 | MsG0780040343.01 | 0.804618 | 1.980940e-49 | 1.026123e-46 |
| MsG0480021370.01 | MsG0880044392.01 | 0.808441 | 3.093000e-50 | 1.768715e-47 |
| MsG0480021370.01 | MsG0880044487.01 | 0.800629 | 1.317912e-48 | 6.166372e-46 |
| MsG0480021370.01 | MsG0880045558.01 | 0.802354 | 5.836801e-49 | 2.853203e-46 |
| MsG0480021370.01 | MsG0880046547.01 | 0.803443 | 3.477046e-49 | 1.747535e-46 |
| MsG0480021370.01 | MsG0880046765.01 | 0.821499 | 3.908625e-53 | 3.185217e-50 |
| MsG0480021370.01 | MsG0880047451.01 | 0.813873 | 2.053065e-51 | 1.356662e-48 |
| MsG0380015603.01 | MsG0480021370.01 | 0.804134 | 2.499156e-49 | 1.278541e-46 |
| MsG0380015896.01 | MsG0480021370.01 | 0.833904 | 4.079288e-56 | 4.764454e-53 |
| MsG0380016135.01 | MsG0480021370.01 | 0.839048 | 2.000654e-57 | 2.729813e-54 |
| MsG0380016137.01 | MsG0480021370.01 | 0.815825 | 7.580278e-52 | 5.281820e-49 |
| MsG0380016138.01 | MsG0480021370.01 | 0.810928 | 9.029806e-51 | 5.515211e-48 |
| MsG0380016192.01 | MsG0480021370.01 | 0.806571 | 7.711492e-50 | 4.199800e-47 |
| MsG0380016194.01 | MsG0480021370.01 | 0.802443 | 5.595654e-49 | 2.741442e-46 |
| MsG0380016284.01 | MsG0480021370.01 | 0.814271 | 1.677579e-51 | 1.120566e-48 |
| MsG0380016771.01 | MsG0480021370.01 | 0.810755 | 9.842902e-51 | 5.983903e-48 |
| MsG0380017423.01 | MsG0480021370.01 | 0.804331 | 2.274031e-49 | 1.169259e-46 |
| MsG0380017728.01 | MsG0480021370.01 | 0.811573 | 6.542444e-51 | 4.064266e-48 |
| MsG0380018037.01 | MsG0480021370.01 | 0.815308 | 9.879027e-52 | 6.786876e-49 |
| MsG0380018069.01 | MsG0480021370.01 | 0.827585 | 1.442153e-54 | 1.398079e-51 |
| MsG0280007075.01 | MsG0480021370.01 | 0.809120 | 2.213706e-50 | 1.288793e-47 |
| MsG0280007976.01 | MsG0480021370.01 | 0.819164 | 1.340705e-52 | 1.023850e-49 |
| MsG0280009756.01 | MsG0480021370.01 | 0.801515 | 8.682008e-49 | 4.154324e-46 |
| MsG0280010353.01 | MsG0480021370.01 | 0.816848 | 4.475775e-52 | 3.207238e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021386.01 | MsG0480021370.01 | PPI |
| MsG0480021386.01 | MsG0480021370.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021370.01.T01 | MTR_4g072580 | 90.805 | 87 | 8 | 0 | 79 | 165 | 1 | 87 | 1.78e-54 | 167 |
| MsG0480021370.01.T01 | MTR_4g072600 | 88.506 | 87 | 10 | 0 | 79 | 165 | 1 | 87 | 3.38e-52 | 161 |
| MsG0480021370.01.T01 | MTR_4g072490 | 82.353 | 85 | 15 | 0 | 79 | 163 | 1 | 85 | 1.75e-48 | 152 |
| MsG0480021370.01.T01 | MTR_4g072740 | 83.529 | 85 | 14 | 0 | 79 | 163 | 1 | 85 | 1.97e-48 | 152 |
| MsG0480021370.01.T01 | MTR_4g072830 | 83.146 | 89 | 12 | 1 | 79 | 164 | 1 | 89 | 2.81e-47 | 149 |
| MsG0480021370.01.T01 | MTR_4g072370 | 81.111 | 90 | 14 | 1 | 79 | 165 | 1 | 90 | 5.59e-47 | 148 |
| MsG0480021370.01.T01 | MTR_4g072470 | 82.353 | 85 | 15 | 0 | 79 | 163 | 1 | 85 | 1.09e-46 | 147 |
| MsG0480021370.01.T01 | MTR_4g072630 | 81.395 | 86 | 15 | 1 | 79 | 163 | 1 | 86 | 6.28e-46 | 145 |
| MsG0480021370.01.T01 | MTR_4g072330 | 76.667 | 90 | 18 | 1 | 79 | 165 | 1 | 90 | 8.42e-46 | 145 |
| MsG0480021370.01.T01 | MTR_4g072610 | 78.161 | 87 | 18 | 1 | 79 | 165 | 1 | 86 | 3.04e-44 | 141 |
| MsG0480021370.01.T01 | MTR_4g072465 | 76.744 | 86 | 19 | 1 | 79 | 163 | 1 | 86 | 4.68e-43 | 138 |
| MsG0480021370.01.T01 | MTR_4g072540 | 82.558 | 86 | 14 | 1 | 79 | 163 | 1 | 86 | 1.19e-42 | 137 |
| MsG0480021370.01.T01 | MTR_4g072650 | 75.862 | 87 | 20 | 1 | 79 | 165 | 1 | 86 | 2.07e-42 | 136 |
| MsG0480021370.01.T01 | MTR_4g072670 | 83.721 | 86 | 13 | 1 | 79 | 163 | 1 | 86 | 2.21e-42 | 136 |
| MsG0480021370.01.T01 | MTR_3g084150 | 71.111 | 90 | 21 | 1 | 79 | 163 | 1 | 90 | 1.00e-41 | 135 |
| MsG0480021370.01.T01 | MTR_3g110038 | 71.429 | 91 | 21 | 1 | 79 | 164 | 1 | 91 | 1.25e-41 | 134 |
| MsG0480021370.01.T01 | MTR_8g461410 | 70.000 | 90 | 22 | 1 | 79 | 163 | 1 | 90 | 2.25e-41 | 134 |
| MsG0480021370.01.T01 | MTR_3g084170 | 72.222 | 90 | 20 | 1 | 79 | 163 | 1 | 90 | 3.26e-41 | 134 |
| MsG0480021370.01.T01 | MTR_4g072310 | 72.527 | 91 | 19 | 1 | 79 | 163 | 1 | 91 | 5.73e-41 | 133 |
| MsG0480021370.01.T01 | MTR_3g084180 | 70.000 | 90 | 22 | 1 | 79 | 163 | 1 | 90 | 8.33e-41 | 132 |
| MsG0480021370.01.T01 | MTR_4g072820 | 75.000 | 84 | 21 | 0 | 79 | 162 | 1 | 84 | 1.01e-40 | 132 |
| MsG0480021370.01.T01 | MTR_4g072880 | 69.231 | 91 | 22 | 1 | 79 | 163 | 1 | 91 | 2.32e-40 | 131 |
| MsG0480021370.01.T01 | MTR_4g072690 | 81.176 | 85 | 16 | 0 | 79 | 163 | 1 | 85 | 2.46e-40 | 131 |
| MsG0480021370.01.T01 | MTR_3g084240 | 71.111 | 90 | 21 | 1 | 79 | 163 | 1 | 90 | 3.89e-40 | 131 |
| MsG0480021370.01.T01 | MTR_4g072510 | 80.233 | 86 | 16 | 1 | 79 | 163 | 1 | 86 | 5.27e-40 | 130 |
| MsG0480021370.01.T01 | MTR_4g072250 | 74.725 | 91 | 16 | 2 | 79 | 163 | 1 | 90 | 8.26e-40 | 130 |
| MsG0480021370.01.T01 | MTR_4g072380 | 75.904 | 83 | 19 | 1 | 79 | 160 | 1 | 83 | 1.73e-39 | 129 |
| MsG0480021370.01.T01 | MTR_5g008350 | 81.081 | 74 | 14 | 0 | 79 | 152 | 1 | 74 | 2.25e-39 | 128 |
| MsG0480021370.01.T01 | MTR_4g072870 | 67.033 | 91 | 24 | 1 | 79 | 163 | 1 | 91 | 2.52e-39 | 129 |
| MsG0480021370.01.T01 | MTR_4g072220 | 68.132 | 91 | 23 | 1 | 79 | 163 | 1 | 91 | 3.92e-39 | 128 |
| MsG0480021370.01.T01 | MTR_4g072240 | 67.033 | 91 | 24 | 1 | 79 | 163 | 1 | 91 | 4.86e-39 | 128 |
| MsG0480021370.01.T01 | MTR_4g072720 | 77.907 | 86 | 18 | 1 | 79 | 163 | 1 | 86 | 5.63e-39 | 127 |
| MsG0480021370.01.T01 | MTR_3g084220 | 68.889 | 90 | 23 | 1 | 79 | 163 | 1 | 90 | 6.02e-39 | 128 |
| MsG0480021370.01.T01 | MTR_3g110032 | 68.132 | 91 | 23 | 1 | 79 | 163 | 1 | 91 | 1.79e-38 | 127 |
| MsG0480021370.01.T01 | MTR_4g072450 | 78.824 | 85 | 18 | 0 | 79 | 163 | 1 | 85 | 2.03e-38 | 126 |
| MsG0480021370.01.T01 | MTR_4g072260 | 67.033 | 91 | 24 | 1 | 79 | 163 | 1 | 91 | 3.09e-38 | 126 |
| MsG0480021370.01.T01 | MTR_4g072660 | 70.732 | 82 | 24 | 0 | 79 | 160 | 1 | 82 | 4.32e-38 | 125 |
| MsG0480021370.01.T01 | MTR_4g050700 | 70.455 | 88 | 20 | 1 | 79 | 160 | 1 | 88 | 4.47e-38 | 125 |
| MsG0480021370.01.T01 | MTR_2g012410 | 70.455 | 88 | 20 | 1 | 79 | 160 | 1 | 88 | 4.47e-38 | 125 |
| MsG0480021370.01.T01 | MTR_3g110042 | 70.787 | 89 | 21 | 1 | 79 | 162 | 1 | 89 | 6.51e-38 | 125 |
| MsG0480021370.01.T01 | MTR_4g072590 | 77.647 | 85 | 19 | 0 | 79 | 163 | 1 | 85 | 8.20e-38 | 125 |
| MsG0480021370.01.T01 | MTR_3g084250 | 67.778 | 90 | 24 | 1 | 79 | 163 | 1 | 90 | 9.03e-38 | 125 |
| MsG0480021370.01.T01 | MTR_4g072890 | 65.934 | 91 | 25 | 1 | 79 | 163 | 1 | 91 | 1.04e-37 | 125 |
| MsG0480021370.01.T01 | MTR_4g072300 | 64.835 | 91 | 26 | 1 | 79 | 163 | 1 | 91 | 1.39e-37 | 124 |
| MsG0480021370.01.T01 | MTR_4g072230 | 71.910 | 89 | 17 | 2 | 79 | 161 | 1 | 87 | 1.50e-37 | 124 |
| MsG0480021370.01.T01 | MTR_4g072270 | 69.318 | 88 | 21 | 1 | 79 | 160 | 1 | 88 | 2.35e-37 | 124 |
| MsG0480021370.01.T01 | MTR_4g072480 | 66.667 | 90 | 25 | 1 | 79 | 163 | 1 | 90 | 3.10e-37 | 124 |
| MsG0480021370.01.T01 | MTR_4g072850 | 69.892 | 93 | 21 | 1 | 79 | 164 | 1 | 93 | 3.32e-37 | 123 |
| MsG0480021370.01.T01 | MTR_4g072860 | 70.330 | 91 | 21 | 1 | 79 | 163 | 1 | 91 | 6.27e-37 | 123 |
| MsG0480021370.01.T01 | MTR_3g117630 | 73.494 | 83 | 16 | 1 | 87 | 163 | 8 | 90 | 7.10e-37 | 122 |
| MsG0480021370.01.T01 | MTR_4g072570 | 67.778 | 90 | 24 | 1 | 79 | 163 | 1 | 90 | 9.32e-37 | 122 |
| MsG0480021370.01.T01 | MTR_3g084260 | 67.033 | 91 | 24 | 1 | 79 | 163 | 1 | 91 | 1.26e-36 | 122 |
| MsG0480021370.01.T01 | MTR_4g072730 | 65.556 | 90 | 26 | 1 | 79 | 163 | 1 | 90 | 3.16e-36 | 121 |
| MsG0480021370.01.T01 | MTR_4g072620 | 64.444 | 90 | 27 | 1 | 79 | 163 | 1 | 90 | 6.50e-36 | 120 |
| MsG0480021370.01.T01 | MTR_4g072680 | 64.444 | 90 | 27 | 1 | 79 | 163 | 1 | 90 | 9.11e-36 | 120 |
| MsG0480021370.01.T01 | MTR_8g461420 | 65.934 | 91 | 26 | 1 | 79 | 164 | 1 | 91 | 2.13e-35 | 119 |
| MsG0480021370.01.T01 | MTR_3g084190 | 64.835 | 91 | 27 | 1 | 79 | 164 | 1 | 91 | 2.35e-35 | 119 |
| MsG0480021370.01.T01 | MTR_4g072640 | 66.304 | 92 | 24 | 2 | 79 | 164 | 1 | 91 | 4.29e-35 | 118 |
| MsG0480021370.01.T01 | MTR_4g072500 | 65.934 | 91 | 24 | 2 | 79 | 163 | 1 | 90 | 8.16e-35 | 117 |
| MsG0480021370.01.T01 | MTR_3g084230 | 64.835 | 91 | 27 | 1 | 79 | 164 | 1 | 91 | 9.71e-35 | 117 |
| MsG0480021370.01.T01 | MTR_4g072460 | 62.222 | 90 | 29 | 1 | 79 | 163 | 1 | 90 | 3.44e-34 | 115 |
| MsG0480021370.01.T01 | MTR_4g072940 | 68.132 | 91 | 22 | 1 | 81 | 164 | 33 | 123 | 5.74e-34 | 116 |
| MsG0480021370.01.T01 | MTR_3g084210 | 64.444 | 90 | 27 | 1 | 79 | 163 | 1 | 90 | 7.14e-34 | 115 |
| MsG0480021370.01.T01 | MTR_3g110045 | 64.516 | 93 | 28 | 1 | 77 | 164 | 58 | 150 | 1.08e-33 | 116 |
| MsG0480021370.01.T01 | MTR_4g072530 | 63.736 | 91 | 26 | 2 | 79 | 163 | 1 | 90 | 1.32e-33 | 114 |
| MsG0480021370.01.T01 | MTR_3g084160 | 62.637 | 91 | 29 | 1 | 79 | 164 | 1 | 91 | 6.74e-33 | 112 |
| MsG0480021370.01.T01 | MTR_5g008360 | 66.667 | 78 | 26 | 0 | 86 | 163 | 4 | 81 | 6.83e-33 | 112 |
| MsG0480021370.01.T01 | MTR_4g072980 | 56.522 | 92 | 32 | 2 | 79 | 162 | 1 | 92 | 6.88e-31 | 107 |
| MsG0480021370.01.T01 | MTR_3g117640 | 68.116 | 69 | 21 | 1 | 98 | 165 | 34 | 102 | 1.46e-30 | 107 |
| MsG0480021370.01.T01 | MTR_4g072770 | 63.529 | 85 | 26 | 1 | 79 | 163 | 1 | 80 | 1.58e-30 | 106 |
| MsG0480021370.01.T01 | MTR_5g008370 | 78.788 | 66 | 14 | 0 | 98 | 163 | 25 | 90 | 2.01e-30 | 107 |
| MsG0480021370.01.T01 | MTR_4g072550 | 61.446 | 83 | 28 | 1 | 85 | 163 | 19 | 101 | 1.78e-29 | 104 |
| MsG0480021370.01.T01 | MTR_3g084200 | 68.056 | 72 | 18 | 1 | 79 | 145 | 1 | 72 | 3.02e-29 | 103 |
| MsG0480021370.01.T01 | MTR_4g072560 | 54.082 | 98 | 32 | 3 | 79 | 163 | 1 | 98 | 4.32e-29 | 103 |
| MsG0480021370.01.T01 | MTR_4g072910 | 63.889 | 72 | 26 | 0 | 92 | 163 | 29 | 100 | 4.19e-28 | 100 |
| MsG0480021370.01.T01 | MTR_4g072290 | 55.294 | 85 | 30 | 1 | 79 | 163 | 1 | 77 | 1.16e-24 | 91.3 |
| MsG0480021370.01.T01 | MTR_3g110035 | 64.062 | 64 | 23 | 0 | 100 | 163 | 73 | 136 | 1.99e-24 | 92.4 |
| MsG0480021370.01.T01 | MTR_4g072280 | 58.667 | 75 | 25 | 1 | 79 | 147 | 1 | 75 | 2.31e-23 | 88.2 |
| MsG0480021370.01.T01 | MTR_6g077850 | 58.209 | 67 | 28 | 0 | 98 | 164 | 34 | 100 | 5.35e-23 | 87.8 |
| MsG0480021370.01.T01 | MTR_4g072750 | 60.000 | 70 | 25 | 1 | 78 | 144 | 4 | 73 | 4.71e-22 | 84.7 |
| MsG0480021370.01.T01 | MTR_3g113310 | 56.923 | 65 | 27 | 1 | 98 | 162 | 42 | 105 | 2.30e-21 | 84.0 |
| MsG0480021370.01.T01 | MTR_3g117610 | 58.209 | 67 | 27 | 1 | 98 | 164 | 45 | 110 | 1.01e-20 | 82.4 |
| MsG0480021370.01.T01 | MTR_4g072930 | 48.750 | 80 | 37 | 1 | 88 | 163 | 31 | 110 | 6.41e-20 | 80.1 |
| MsG0480021370.01.T01 | MTR_4g072190 | 56.923 | 65 | 27 | 1 | 98 | 162 | 36 | 99 | 9.82e-20 | 79.3 |
| MsG0480021370.01.T01 | MTR_4g072840 | 50.000 | 84 | 17 | 2 | 79 | 162 | 1 | 59 | 9.56e-19 | 75.9 |
| MsG0480021370.01.T01 | MTR_8g461400 | 46.667 | 90 | 17 | 2 | 79 | 163 | 1 | 64 | 2.58e-17 | 72.0 |
| MsG0480021370.01.T01 | MTR_5g021820 | 52.308 | 65 | 30 | 1 | 98 | 162 | 40 | 103 | 5.33e-17 | 72.4 |
| MsG0480021370.01.T01 | MTR_8g076040 | 53.968 | 63 | 28 | 1 | 98 | 160 | 41 | 102 | 2.53e-16 | 70.9 |
| MsG0480021370.01.T01 | MTR_1g009150 | 53.623 | 69 | 31 | 1 | 90 | 158 | 63 | 130 | 7.90e-16 | 71.2 |
| MsG0480021370.01.T01 | MTR_1g094750 | 54.098 | 61 | 27 | 1 | 98 | 158 | 50 | 109 | 1.11e-15 | 69.3 |
| MsG0480021370.01.T01 | MTR_2g043960 | 55.172 | 58 | 25 | 1 | 98 | 155 | 76 | 132 | 4.57e-15 | 68.9 |
| MsG0480021370.01.T01 | MTR_7g118010 | 47.826 | 69 | 33 | 2 | 98 | 164 | 23 | 90 | 5.81e-15 | 67.4 |
| MsG0480021370.01.T01 | MTR_4g005310 | 46.970 | 66 | 34 | 1 | 94 | 158 | 58 | 123 | 2.65e-14 | 66.6 |
| MsG0480021370.01.T01 | MTR_4g124750 | 53.448 | 58 | 26 | 1 | 98 | 155 | 69 | 125 | 2.94e-14 | 66.6 |
| MsG0480021370.01.T01 | MTR_0388s0020 | 30.769 | 156 | 83 | 6 | 15 | 163 | 5 | 142 | 5.60e-14 | 65.9 |
| MsG0480021370.01.T01 | MTR_7g101740 | 56.250 | 64 | 25 | 2 | 98 | 160 | 40 | 101 | 6.79e-14 | 64.7 |
| MsG0480021370.01.T01 | MTR_1g061570 | 52.459 | 61 | 28 | 1 | 98 | 158 | 19 | 78 | 7.95e-14 | 64.7 |
| MsG0480021370.01.T01 | MTR_1g063950 | 53.226 | 62 | 26 | 2 | 98 | 158 | 48 | 107 | 8.72e-14 | 64.7 |
| MsG0480021370.01.T01 | MTR_4g025830 | 43.478 | 69 | 35 | 2 | 98 | 163 | 79 | 146 | 1.06e-13 | 65.5 |
| MsG0480021370.01.T01 | MTR_8g461210 | 47.761 | 67 | 34 | 1 | 98 | 164 | 35 | 100 | 4.55e-13 | 62.8 |
| MsG0480021370.01.T01 | MTR_4g072160 | 44.872 | 78 | 40 | 2 | 88 | 164 | 27 | 102 | 6.81e-13 | 62.8 |
| MsG0480021370.01.T01 | MTR_8g026730 | 42.029 | 69 | 37 | 2 | 98 | 164 | 27 | 94 | 1.07e-12 | 61.2 |
| MsG0480021370.01.T01 | MTR_4g005320 | 48.438 | 64 | 32 | 1 | 95 | 158 | 67 | 129 | 1.27e-12 | 62.4 |
| MsG0480021370.01.T01 | MTR_3g092220 | 34.783 | 92 | 57 | 2 | 74 | 163 | 9 | 99 | 1.45e-12 | 61.2 |
| MsG0480021370.01.T01 | MTR_3g105900 | 68.293 | 41 | 13 | 0 | 98 | 138 | 1172 | 1212 | 1.60e-12 | 64.7 |
| MsG0480021370.01.T01 | MTR_1g024085 | 47.761 | 67 | 34 | 1 | 98 | 164 | 37 | 102 | 1.90e-12 | 61.6 |
| MsG0480021370.01.T01 | MTR_3g109160 | 52.459 | 61 | 28 | 1 | 98 | 158 | 69 | 128 | 3.78e-12 | 61.6 |
| MsG0480021370.01.T01 | MTR_7g405740 | 37.805 | 82 | 50 | 1 | 77 | 158 | 46 | 126 | 4.01e-12 | 61.2 |
| MsG0480021370.01.T01 | MTR_4g021810 | 50.746 | 67 | 31 | 2 | 90 | 155 | 18 | 83 | 7.82e-12 | 58.9 |
| MsG0480021370.01.T01 | MTR_5g008380 | 81.250 | 32 | 6 | 0 | 132 | 163 | 246 | 277 | 9.65e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021370.01.T01 | AT4G38840 | 71.642 | 67 | 18 | 1 | 98 | 163 | 33 | 99 | 1.90e-31 | 109 |
| MsG0480021370.01.T01 | AT5G18020 | 59.494 | 79 | 31 | 1 | 87 | 164 | 13 | 91 | 4.46e-30 | 105 |
| MsG0480021370.01.T01 | AT5G18050 | 59.740 | 77 | 30 | 1 | 87 | 162 | 13 | 89 | 5.51e-30 | 105 |
| MsG0480021370.01.T01 | AT5G18060 | 61.039 | 77 | 29 | 1 | 87 | 162 | 13 | 89 | 9.28e-30 | 104 |
| MsG0480021370.01.T01 | AT2G21210 | 60.526 | 76 | 28 | 1 | 90 | 163 | 20 | 95 | 1.84e-29 | 104 |
| MsG0480021370.01.T01 | AT5G18080 | 66.667 | 66 | 21 | 1 | 98 | 162 | 24 | 89 | 3.00e-29 | 103 |
| MsG0480021370.01.T01 | AT2G21210 | 50.515 | 97 | 38 | 2 | 77 | 163 | 66 | 162 | 5.94e-29 | 105 |
| MsG0480021370.01.T01 | AT2G21200 | 60.526 | 76 | 29 | 1 | 88 | 162 | 11 | 86 | 7.79e-29 | 102 |
| MsG0480021370.01.T01 | AT5G18030 | 58.228 | 79 | 32 | 1 | 85 | 162 | 9 | 87 | 8.52e-29 | 102 |
| MsG0480021370.01.T01 | AT4G34810 | 55.556 | 99 | 37 | 3 | 71 | 162 | 19 | 117 | 7.43e-28 | 100 |
| MsG0480021370.01.T01 | AT4G34800 | 58.333 | 84 | 31 | 2 | 79 | 158 | 1 | 84 | 8.31e-28 | 100 |
| MsG0480021370.01.T01 | AT3G03840 | 51.613 | 93 | 37 | 2 | 72 | 162 | 7 | 93 | 9.33e-28 | 99.8 |
| MsG0480021370.01.T01 | AT4G38825 | 60.563 | 71 | 27 | 1 | 93 | 162 | 18 | 88 | 1.16e-27 | 99.4 |
| MsG0480021370.01.T01 | AT5G18010 | 57.143 | 77 | 32 | 1 | 87 | 162 | 13 | 89 | 2.43e-27 | 98.6 |
| MsG0480021370.01.T01 | AT4G38850 | 57.500 | 80 | 27 | 2 | 86 | 162 | 13 | 88 | 3.30e-27 | 98.2 |
| MsG0480021370.01.T01 | AT4G34770 | 64.000 | 75 | 25 | 1 | 91 | 163 | 28 | 102 | 6.47e-27 | 97.8 |
| MsG0480021370.01.T01 | AT3G03850 | 58.537 | 82 | 28 | 2 | 83 | 162 | 14 | 91 | 4.84e-26 | 95.5 |
| MsG0480021370.01.T01 | AT3G03820 | 48.936 | 94 | 39 | 2 | 72 | 162 | 7 | 94 | 1.11e-25 | 94.7 |
| MsG0480021370.01.T01 | AT4G13790 | 49.367 | 79 | 38 | 1 | 86 | 162 | 13 | 91 | 2.22e-25 | 93.6 |
| MsG0480021370.01.T01 | AT4G34780 | 61.644 | 73 | 25 | 1 | 95 | 164 | 25 | 97 | 2.00e-24 | 91.7 |
| MsG0480021370.01.T01 | AT3G03830 | 53.012 | 83 | 31 | 2 | 83 | 162 | 14 | 91 | 4.45e-23 | 87.8 |
| MsG0480021370.01.T01 | AT4G34790 | 61.538 | 65 | 23 | 1 | 98 | 160 | 39 | 103 | 1.21e-22 | 87.0 |
| MsG0480021370.01.T01 | AT4G38860 | 58.730 | 63 | 26 | 0 | 98 | 160 | 40 | 102 | 9.33e-21 | 82.4 |
| MsG0480021370.01.T01 | AT1G75580 | 46.512 | 86 | 45 | 1 | 77 | 162 | 23 | 107 | 5.61e-20 | 80.5 |
| MsG0480021370.01.T01 | AT2G21220 | 53.731 | 67 | 30 | 1 | 96 | 162 | 38 | 103 | 9.84e-19 | 77.0 |
| MsG0480021370.01.T01 | AT4G34760 | 55.385 | 65 | 28 | 1 | 98 | 162 | 43 | 106 | 1.32e-18 | 76.6 |
| MsG0480021370.01.T01 | AT1G19830 | 36.691 | 139 | 48 | 4 | 25 | 162 | 13 | 112 | 3.02e-17 | 73.6 |
| MsG0480021370.01.T01 | AT3G20220 | 50.725 | 69 | 32 | 2 | 98 | 165 | 47 | 114 | 8.48e-17 | 72.4 |
| MsG0480021370.01.T01 | AT2G16580 | 53.968 | 63 | 28 | 1 | 98 | 160 | 44 | 105 | 4.12e-16 | 70.5 |
| MsG0480021370.01.T01 | AT4G36110 | 52.381 | 63 | 29 | 1 | 98 | 160 | 40 | 101 | 9.24e-16 | 69.3 |
| MsG0480021370.01.T01 | AT3G43120 | 53.448 | 58 | 26 | 1 | 98 | 155 | 79 | 135 | 2.77e-15 | 69.7 |
| MsG0480021370.01.T01 | AT2G18010 | 50.794 | 63 | 30 | 1 | 98 | 160 | 48 | 109 | 1.54e-14 | 66.2 |
| MsG0480021370.01.T01 | AT5G20810 | 55.172 | 58 | 25 | 1 | 98 | 155 | 79 | 135 | 2.83e-14 | 67.0 |
| MsG0480021370.01.T01 | AT5G66260 | 46.835 | 79 | 39 | 2 | 87 | 163 | 21 | 98 | 2.89e-14 | 65.5 |
| MsG0480021370.01.T01 | AT4G34750 | 40.506 | 79 | 46 | 1 | 87 | 165 | 26 | 103 | 4.01e-14 | 66.2 |
| MsG0480021370.01.T01 | AT4G34750 | 40.506 | 79 | 46 | 1 | 87 | 165 | 26 | 103 | 4.01e-14 | 66.2 |
| MsG0480021370.01.T01 | AT5G20810 | 55.172 | 58 | 25 | 1 | 98 | 155 | 79 | 135 | 5.47e-14 | 66.6 |
| MsG0480021370.01.T01 | AT2G37030 | 51.613 | 62 | 29 | 1 | 98 | 159 | 49 | 109 | 7.09e-14 | 65.1 |
| MsG0480021370.01.T01 | AT3G51200 | 41.558 | 77 | 42 | 2 | 82 | 158 | 26 | 99 | 1.62e-13 | 63.5 |
| MsG0480021370.01.T01 | AT1G75590 | 51.724 | 58 | 27 | 1 | 98 | 155 | 42 | 98 | 2.07e-13 | 64.3 |
| MsG0480021370.01.T01 | AT4G22620 | 38.554 | 83 | 47 | 2 | 84 | 163 | 65 | 146 | 5.33e-13 | 63.5 |
| MsG0480021370.01.T01 | AT5G10990 | 50.000 | 58 | 28 | 1 | 98 | 155 | 41 | 97 | 5.88e-13 | 63.2 |
| MsG0480021370.01.T01 | AT3G53250 | 46.774 | 62 | 29 | 1 | 98 | 159 | 52 | 109 | 9.90e-13 | 62.0 |
| MsG0480021370.01.T01 | AT3G53250 | 46.774 | 62 | 29 | 1 | 98 | 159 | 83 | 140 | 1.01e-12 | 62.8 |
| MsG0480021370.01.T01 | AT3G61900 | 38.095 | 84 | 48 | 2 | 84 | 164 | 16 | 98 | 1.11e-12 | 62.0 |
| MsG0480021370.01.T01 | AT1G19840 | 48.571 | 70 | 33 | 2 | 88 | 155 | 29 | 97 | 1.21e-12 | 62.4 |
| MsG0480021370.01.T01 | AT2G24400 | 49.296 | 71 | 35 | 1 | 88 | 158 | 54 | 123 | 1.74e-12 | 62.4 |
| MsG0480021370.01.T01 | AT4G31320 | 46.479 | 71 | 37 | 1 | 88 | 158 | 70 | 139 | 4.32e-12 | 61.6 |
| MsG0480021370.01.T01 | AT2G46690 | 41.667 | 72 | 38 | 2 | 87 | 155 | 13 | 83 | 1.37e-11 | 58.9 |
| MsG0480021370.01.T01 | AT2G45210 | 40.580 | 69 | 37 | 2 | 98 | 163 | 79 | 146 | 1.39e-11 | 59.7 |
| MsG0480021370.01.T01 | AT3G60690 | 42.647 | 68 | 35 | 2 | 98 | 162 | 88 | 154 | 2.30e-11 | 59.3 |
| MsG0480021370.01.T01 | AT4G00880 | 46.377 | 69 | 34 | 2 | 98 | 164 | 28 | 95 | 2.89e-11 | 58.2 |
Find 34 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCAACACATACTAAAA+TGG | 0.126254 | 4:+57164635 | MsG0480021370.01.T01:CDS |
| GGTTGGTTCAAGTATGATAT+TGG | 0.247037 | 4:-57164768 | None:intergenic |
| TTTCTGAATTTCAAATGTTT+TGG | 0.252226 | 4:-57164556 | None:intergenic |
| ATTCATGGCAGCAAACATTT+AGG | 0.289611 | 4:+57164510 | MsG0480021370.01.T01:intron |
| TTCTCAACACATACTAAAAT+GGG | 0.367240 | 4:+57164636 | MsG0480021370.01.T01:CDS |
| AGTCAAGCTGAGGAAGAGTT+TGG | 0.376098 | 4:-57163714 | MsG0480021369.01.T01:CDS |
| GTTGGTTCAAGTATGATATT+GGG | 0.382183 | 4:-57164767 | None:intergenic |
| ATTCGAATTGTTCCTCGGCT+TGG | 0.441224 | 4:-57164812 | None:intergenic |
| ATCATATTCGAATTGTTCCT+CGG | 0.498996 | 4:-57164817 | None:intergenic |
| AAAAGTTGTGTACGTGCCAA+AGG | 0.518623 | 4:+57164698 | MsG0480021370.01.T01:CDS |
| CTCGTTTGAGTAGGTGCTAA+CGG | 0.521428 | 4:+57164898 | MsG0480021370.01.T01:CDS |
| ATATCACTTCTCGTTTGAGT+AGG | 0.532328 | 4:+57164889 | MsG0480021370.01.T01:CDS |
| GGATATCTTGCAGTATATGT+AGG | 0.533794 | 4:+57164720 | MsG0480021370.01.T01:CDS |
| TATACTGCAAGATATCCCTT+TGG | 0.554191 | 4:-57164714 | None:intergenic |
| AAAGTTGTGTACGTGCCAAA+GGG | 0.557476 | 4:+57164699 | MsG0480021370.01.T01:CDS |
| GACATCTTCTGTGCAAGGAA+TGG | 0.561649 | 4:+57163665 | MsG0480021370.01.T01:CDS |
| ACAAGTCTTGAAACGATGGT+TGG | 0.568123 | 4:-57164785 | None:intergenic |
| AGGAATGGTGAGTCCACCCA+TGG | 0.569046 | 4:+57163680 | MsG0480021370.01.T01:CDS |
| GTTTGGATATGATCATCCCA+TGG | 0.570301 | 4:-57163697 | MsG0480021369.01.T01:CDS |
| TTCGAATATGATCATCCAGC+GGG | 0.576347 | 4:+57164828 | MsG0480021370.01.T01:CDS |
| CTCAACAAGTCTTGAAACGA+TGG | 0.576425 | 4:+57163735 | MsG0480021370.01.T01:CDS |
| TGAAAGACATCTTCTGTGCA+AGG | 0.587793 | 4:+57163660 | MsG0480021370.01.T01:CDS |
| TTCAACAAGTCTTGAAACGA+TGG | 0.599919 | 4:-57164789 | None:intergenic |
| AAGAAAACATCTTCTCTACA+AGG | 0.601482 | 4:-57164864 | None:intergenic |
| GGAATAGTGAGACCACCCGC+TGG | 0.621275 | 4:-57164843 | None:intergenic |
| GATGTCTTTCTGATGATACC+AGG | 0.624908 | 4:-57164669 | None:intergenic |
| AGACTTGTTGAGTCAAGCTG+AGG | 0.628331 | 4:-57163724 | MsG0480021369.01.T01:CDS |
| TCTTGCAGTATATGTAGGAG+AGG | 0.631317 | 4:+57164725 | MsG0480021370.01.T01:CDS |
| GGATATGATCATCCCATGGG+TGG | 0.636117 | 4:-57163693 | MsG0480021369.01.T01:CDS |
| TTTGGATATGATCATCCCAT+GGG | 0.641263 | 4:-57163696 | MsG0480021369.01.T01:CDS |
| GGAATGGTGAGTCCACCCAT+GGG | 0.658493 | 4:+57163681 | MsG0480021370.01.T01:CDS |
| AGACTTGTTGAACCAAGCCG+AGG | 0.665105 | 4:+57164800 | MsG0480021370.01.T01:CDS |
| GAATATGATCATCCAGCGGG+TGG | 0.676285 | 4:+57164831 | MsG0480021370.01.T01:CDS |
| ATTCGAATATGATCATCCAG+CGG | 0.709307 | 4:+57164827 | MsG0480021370.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTGTATTTATAATTATTG+AGG | + | Chr4:57164009-57164028 | MsG0480021370.01.T01:intron | 15.0% |
| !! | CATGAATATATATAGATGAA+AGG | - | Chr4:57164497-57164516 | None:intergenic | 20.0% |
| !! | CTTTCATCTATATATATTCA+TGG | + | Chr4:57164495-57164514 | MsG0480021370.01.T01:intron | 20.0% |
| !!! | TTTCTGAATTTCAAATGTTT+TGG | - | Chr4:57164559-57164578 | None:intergenic | 20.0% |
| ! | TTCTCAACACATACTAAAAT+GGG | + | Chr4:57164636-57164655 | MsG0480021370.01.T01:CDS | 25.0% |
| ! | TTTCTCAACACATACTAAAA+TGG | + | Chr4:57164635-57164654 | MsG0480021370.01.T01:CDS | 25.0% |
| !! | CATAATTTGTAAACATGCTT+AGG | + | Chr4:57164176-57164195 | MsG0480021370.01.T01:intron | 25.0% |
| !! | GTATTTGAGATTGTTTGATA+GGG | - | Chr4:57164112-57164131 | None:intergenic | 25.0% |
| !! | TGTATTTGAGATTGTTTGAT+AGG | - | Chr4:57164113-57164132 | None:intergenic | 25.0% |
| AAAATCTGTAGAAGTGAGAA+AGG | - | Chr4:57163829-57163848 | MsG0480021369.01.T01:CDS | 30.0% | |
| AAATCTGTAGAAGTGAGAAA+GGG | - | Chr4:57163828-57163847 | MsG0480021369.01.T01:CDS | 30.0% | |
| AAGAAAACATCTTCTCTACA+AGG | - | Chr4:57164867-57164886 | None:intergenic | 30.0% | |
| AAGGATATGTAACAAACAGT+CGG | - | Chr4:57164478-57164497 | None:intergenic | 30.0% | |
| AGTAGATTAGATTGATATGC+AGG | + | Chr4:57164307-57164326 | MsG0480021370.01.T01:intron | 30.0% | |
| ATCATATTCGAATTGTTCCT+CGG | - | Chr4:57164820-57164839 | None:intergenic | 30.0% | |
| GTTGAGAAAAAGAAGAAGAT+TGG | - | Chr4:57164624-57164643 | None:intergenic | 30.0% | |
| TCACAAACAACACAATTCAT+TGG | - | Chr4:57163979-57163998 | None:intergenic | 30.0% | |
| ! | GATTGTGAATGATTTTGTGT+TGG | - | Chr4:57164537-57164556 | None:intergenic | 30.0% |
| ! | GTTGGTTCAAGTATGATATT+GGG | - | Chr4:57164770-57164789 | None:intergenic | 30.0% |
| !! | ATGAATTGTGTTGTTTGTGA+AGG | + | Chr4:57163979-57163998 | MsG0480021370.01.T01:intron | 30.0% |
| ACTATAGTGATCAGTAAAGG+AGG | - | Chr4:57164453-57164472 | None:intergenic | 35.0% | |
| AGAGCATATGAATGATCACA+TGG | - | Chr4:57164402-57164421 | None:intergenic | 35.0% | |
| AGTACCTACCAATTAATGCA+TGG | - | Chr4:57164155-57164174 | None:intergenic | 35.0% | |
| ATATCACTTCTCGTTTGAGT+AGG | + | Chr4:57164889-57164908 | MsG0480021370.01.T01:CDS | 35.0% | |
| ATTCATGGCAGCAAACATTT+AGG | + | Chr4:57164510-57164529 | MsG0480021370.01.T01:intron | 35.0% | |
| ATTCGAATATGATCATCCAG+CGG | + | Chr4:57164827-57164846 | MsG0480021370.01.T01:CDS | 35.0% | |
| CAAACATGACTCAAATCGTA+TGG | + | Chr4:57164426-57164445 | MsG0480021370.01.T01:intron | 35.0% | |
| CATACGATTTGAGTCATGTT+TGG | - | Chr4:57164428-57164447 | None:intergenic | 35.0% | |
| CCCAAACAAGAACCAAAAAT+GGG | - | Chr4:57163906-57163925 | None:intergenic | 35.0% | |
| CTATAGTGATCAGTAAAGGA+GGG | - | Chr4:57164452-57164471 | None:intergenic | 35.0% | |
| GCAACTATAGTGATCAGTAA+AGG | - | Chr4:57164456-57164475 | None:intergenic | 35.0% | |
| GGATATCTTGCAGTATATGT+AGG | + | Chr4:57164720-57164739 | MsG0480021370.01.T01:CDS | 35.0% | |
| TACAAATGCAACCTCTTATC+TGG | + | Chr4:57164129-57164148 | MsG0480021370.01.T01:intron | 35.0% | |
| TATACTGCAAGATATCCCTT+TGG | - | Chr4:57164717-57164736 | None:intergenic | 35.0% | |
| TCCCAAACAAGAACCAAAAA+TGG | - | Chr4:57163907-57163926 | None:intergenic | 35.0% | |
| TTATCTGGCCATGCATTAAT+TGG | + | Chr4:57164144-57164163 | MsG0480021370.01.T01:intron | 35.0% | |
| TTCAACAAGTCTTGAAACGA+TGG | - | Chr4:57164792-57164811 | None:intergenic | 35.0% | |
| TTGAGATTGTTTGATAGGGT+GGG | - | Chr4:57164108-57164127 | None:intergenic | 35.0% | |
| TTTGGATATGATCATCCCAT+GGG | - | Chr4:57163699-57163718 | MsG0480021369.01.T01:CDS | 35.0% | |
| ! | GGTTGGTTCAAGTATGATAT+GGG | + | Chr4:57163756-57163775 | MsG0480021370.01.T01:intron | 35.0% |
| ! | GGTTGGTTCAAGTATGATAT+TGG | - | Chr4:57163775-57163756 | MsG0480021369.01.T01:CDS | 35.0% |
| ! | GTTGGTTCAAGTATGATATG+GGG | + | Chr4:57163757-57163776 | MsG0480021370.01.T01:intron | 35.0% |
| ! | TGATAATGTTGATGTCTAGC+TGG | + | Chr4:57164216-57164235 | MsG0480021370.01.T01:intron | 35.0% |
| ! | TGGTTGGTTCAAGTATGATA+TGG | + | Chr4:57163755-57163774 | MsG0480021370.01.T01:intron | 35.0% |
| ! | TGTAAACGGAAACCCATTTT+TGG | + | Chr4:57163891-57163910 | MsG0480021370.01.T01:intron | 35.0% |
| ! | TTTGAGATTGTTTGATAGGG+TGG | - | Chr4:57164109-57164128 | None:intergenic | 35.0% |
| !! | AAAATGGGTTTTCGTTTACC+TGG | + | Chr4:57164651-57164670 | MsG0480021370.01.T01:CDS | 35.0% |
| !!! | ACCCATTTTTGGTTCTTGTT+TGG | + | Chr4:57163902-57163921 | MsG0480021370.01.T01:intron | 35.0% |
| !!! | CCCATTTTTGGTTCTTGTTT+GGG | + | Chr4:57163903-57163922 | MsG0480021370.01.T01:intron | 35.0% |
| AAAAGTTGTGTACGTGCCAA+AGG | + | Chr4:57164698-57164717 | MsG0480021370.01.T01:CDS | 40.0% | |
| AAAGTTGTGTACGTGCCAAA+GGG | + | Chr4:57164699-57164718 | MsG0480021370.01.T01:CDS | 40.0% | |
| ACAAGTCTTGAAACGATGGT+TGG | + | Chr4:57163739-57163758 | MsG0480021370.01.T01:intron | 40.0% | |
| ACAAGTCTTGAAACGATGGT+TGG | - | Chr4:57163758-57163739 | MsG0480021369.01.T01:CDS | 40.0% | |
| ACATAGGGTGAGATATCATG+TGG | + | Chr4:57164064-57164083 | MsG0480021370.01.T01:intron | 40.0% | |
| ACCCAATTCCAAACGAACAT+AGG | + | Chr4:57164048-57164067 | MsG0480021370.01.T01:intron | 40.0% | |
| CCCAATTCCAAACGAACATA+GGG | + | Chr4:57164049-57164068 | MsG0480021370.01.T01:intron | 40.0% | |
| CCCTTAGAGTAGCATGTAAA+CGG | + | Chr4:57163877-57163896 | MsG0480021370.01.T01:intron | 40.0% | |
| CCGTTTACATGCTACTCTAA+GGG | - | Chr4:57163880-57163899 | MsG0480021369.01.T01:CDS | 40.0% | |
| CTAGCTGGTAAGTGACTATA+AGG | + | Chr4:57164231-57164250 | MsG0480021370.01.T01:intron | 40.0% | |
| CTCAACAAGTCTTGAAACGA+TGG | + | Chr4:57163735-57163754 | MsG0480021370.01.T01:CDS | 40.0% | |
| GATGTCTTTCTGATGATACC+AGG | - | Chr4:57164672-57164691 | None:intergenic | 40.0% | |
| GGATATGTTGCAGTGTATGT+AGG | - | Chr4:57163807-57163826 | MsG0480021369.01.T01:CDS | 40.0% | |
| GGTAAGTGACTATAAGGCAA+TGG | + | Chr4:57164237-57164256 | MsG0480021370.01.T01:intron | 40.0% | |
| GTTTGGATATGATCATCCCA+TGG | - | Chr4:57163700-57163719 | MsG0480021369.01.T01:CDS | 40.0% | |
| TATCTCACCCTATGTTCGTT+TGG | - | Chr4:57164059-57164078 | None:intergenic | 40.0% | |
| TCCGTTTACATGCTACTCTA+AGG | - | Chr4:57163881-57163900 | MsG0480021369.01.T01:CDS | 40.0% | |
| TCTTGCAGTATATGTAGGAG+AGG | + | Chr4:57164725-57164744 | MsG0480021370.01.T01:CDS | 40.0% | |
| TGAAAGACATCTTCTGTGCA+AGG | + | Chr4:57163660-57163679 | MsG0480021370.01.T01:CDS | 40.0% | |
| TGAGATTGTTTGATAGGGTG+GGG | - | Chr4:57164107-57164126 | None:intergenic | 40.0% | |
| TGGAATTGGGTTTCAGTTTC+AGG | - | Chr4:57164039-57164058 | None:intergenic | 40.0% | |
| TTAATGCATGGCCAGATAAG+AGG | - | Chr4:57164143-57164162 | None:intergenic | 40.0% | |
| TTCGAATATGATCATCCAGC+GGG | + | Chr4:57164828-57164847 | MsG0480021370.01.T01:CDS | 40.0% | |
| ! | ACCCTATGTTCGTTTGGAAT+TGG | - | Chr4:57164053-57164072 | None:intergenic | 40.0% |
| ! | CCCTATGTTCGTTTGGAATT+GGG | - | Chr4:57164052-57164071 | None:intergenic | 40.0% |
| AGTCAAGCTGAGGAAGAGTT+TGG | - | Chr4:57163717-57163736 | MsG0480021369.01.T01:CDS | 45.0% | |
| ATGTAGGAGAGGAACAGAAG+AGG | - | Chr4:57163791-57163810 | MsG0480021369.01.T01:CDS | 45.0% | |
| ATTCGAATTGTTCCTCGGCT+TGG | - | Chr4:57164815-57164834 | None:intergenic | 45.0% | |
| CTGGCCATGCATTAATTGGT+AGG | + | Chr4:57164148-57164167 | MsG0480021370.01.T01:intron | 45.0% | |
| GACATCTTCTGTGCAAGGAA+TGG | + | Chr4:57163665-57163684 | MsG0480021370.01.T01:CDS | 45.0% | |
| GTCTGCAAAGGACTTTCTCA+AGG | - | Chr4:57164375-57164394 | None:intergenic | 45.0% | |
| TGTTGCAGTGTATGTAGGAG+AGG | - | Chr4:57163802-57163821 | MsG0480021369.01.T01:CDS | 45.0% | |
| !! | AGACTTGTTGAGTCAAGCTG+AGG | - | Chr4:57163727-57163746 | MsG0480021369.01.T01:CDS | 45.0% |
| !! | GTGTTGTTTGTGAAGGCAAG+AGG | + | Chr4:57163986-57164005 | MsG0480021370.01.T01:intron | 45.0% |
| !! | TCACATGGTGTTGTCTGCAA+AGG | - | Chr4:57164387-57164406 | None:intergenic | 45.0% |
| AGGTCTCTGCTCAACAAGGT+GGG | + | Chr4:57164327-57164346 | MsG0480021370.01.T01:intron | 50.0% | |
| ATGCAGGTCTCTGCTCAACA+AGG | + | Chr4:57164323-57164342 | MsG0480021370.01.T01:intron | 50.0% | |
| GAATATGATCATCCAGCGGG+TGG | + | Chr4:57164831-57164850 | MsG0480021370.01.T01:CDS | 50.0% | |
| GGATATGATCATCCCATGGG+TGG | - | Chr4:57163696-57163715 | MsG0480021369.01.T01:CDS | 50.0% | |
| GTGGGACTTGCAACATCTGA+TGG | + | Chr4:57164345-57164364 | MsG0480021370.01.T01:intron | 50.0% | |
| !! | AGACTTGTTGAACCAAGCCG+AGG | + | Chr4:57164800-57164819 | MsG0480021370.01.T01:CDS | 50.0% |
| AGGAATGGTGAGTCCACCCA+TGG | + | Chr4:57163680-57163699 | MsG0480021370.01.T01:CDS | 55.0% | |
| CAGGTCTCTGCTCAACAAGG+TGG | + | Chr4:57164326-57164345 | MsG0480021370.01.T01:intron | 55.0% | |
| GGAATGGTGAGTCCACCCAT+GGG | + | Chr4:57163681-57163700 | MsG0480021370.01.T01:CDS | 55.0% | |
| GGAATAGTGAGACCACCCGC+TGG | - | Chr4:57164846-57164865 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 57163656 | 57164917 | 57163656 | ID=MsG0480021370.01;Name=MsG0480021370.01 |
| Chr4 | mRNA | 57163656 | 57164917 | 57163656 | ID=MsG0480021370.01.T01;Parent=MsG0480021370.01;Name=MsG0480021370.01.T01;_AED=0.50;_eAED=0.68;_QI=0|0|0|1|0|0|2|0|165 |
| Chr4 | exon | 57163656 | 57163756 | 57163656 | ID=MsG0480021370.01.T01:exon:7257;Parent=MsG0480021370.01.T01 |
| Chr4 | exon | 57164521 | 57164917 | 57164521 | ID=MsG0480021370.01.T01:exon:7258;Parent=MsG0480021370.01.T01 |
| Chr4 | CDS | 57163656 | 57163756 | 57163656 | ID=MsG0480021370.01.T01:cds;Parent=MsG0480021370.01.T01 |
| Chr4 | CDS | 57164521 | 57164917 | 57164521 | ID=MsG0480021370.01.T01:cds;Parent=MsG0480021370.01.T01 |
| Gene Sequence |
| Protein sequence |
