AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005750.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005750.01.T01 MTR_1g106070 86.145 166 23 0 1 166 18 183 1.40e-102 293
MsG0180005750.01.T01 MTR_1g105920 88.961 154 17 0 1 154 18 171 4.67e-99 286
MsG0180005750.01.T01 MTR_1g105910 85.897 156 22 0 1 156 18 173 3.60e-97 282
MsG0180005750.01.T01 MTR_8g043650 80.000 165 33 0 1 165 18 182 2.09e-95 277
MsG0180005750.01.T01 MTR_3g052920 83.766 154 25 0 1 154 18 171 9.21e-95 275
MsG0180005750.01.T01 MTR_2g030740 85.065 154 23 0 1 154 18 171 1.16e-93 273
MsG0180005750.01.T01 MTR_1g012570 78.788 165 35 0 1 165 18 182 7.76e-93 271
MsG0180005750.01.T01 MTR_1g105905 78.846 156 33 0 1 156 1 156 2.41e-87 256
MsG0180005750.01.T01 MTR_1g108510 77.181 149 34 0 1 149 18 166 3.86e-80 238
MsG0180005750.01.T01 MTR_3g030770 77.181 149 34 0 1 149 18 166 1.39e-79 237
MsG0180005750.01.T01 MTR_2g093190 76.510 149 35 0 1 149 18 166 1.12e-77 232
MsG0180005750.01.T01 MTR_1g108580 74.497 149 38 0 1 149 18 166 1.63e-76 229
MsG0180005750.01.T01 MTR_3g052870 69.643 168 26 2 1 165 18 163 2.23e-74 223
MsG0180005750.01.T01 MTR_5g045560 69.481 154 47 0 1 154 18 171 1.13e-73 222
MsG0180005750.01.T01 MTR_0121s0080 70.861 151 44 0 1 151 18 168 5.52e-71 215
MsG0180005750.01.T01 MTR_1g077360 68.456 149 47 0 1 149 18 166 3.60e-70 213
MsG0180005750.01.T01 MTR_5g055100 62.424 165 62 0 1 165 18 182 3.63e-69 211
MsG0180005750.01.T01 MTR_1g075600 68.456 149 47 0 1 149 18 166 7.96e-69 210
MsG0180005750.01.T01 MTR_2g085280 65.584 154 53 0 1 154 18 171 1.09e-68 209
MsG0180005750.01.T01 MTR_2g085250 65.584 154 53 0 1 154 18 171 1.29e-68 209
MsG0180005750.01.T01 MTR_7g062350 68.966 145 45 0 7 151 36 180 1.69e-66 204
MsG0180005750.01.T01 MTR_5g053390 65.584 154 53 0 1 154 18 171 1.60e-65 201
MsG0180005750.01.T01 MTR_3g080940 54.839 155 70 0 1 155 18 172 4.51e-57 179
MsG0180005750.01.T01 MTR_0121s0100 71.681 113 32 0 1 113 18 130 1.92e-54 170
MsG0180005750.01.T01 MTR_1g075570 59.868 152 47 1 1 152 1 138 2.08e-49 158
MsG0180005750.01.T01 MTR_3g030780 66.964 112 37 0 1 112 18 129 2.10e-49 157
MsG0180005750.01.T01 MTR_3g067910 66.990 103 34 0 4 106 2 104 2.94e-45 145
MsG0180005750.01.T01 MTR_1g108500 58.654 104 22 1 5 108 110 192 1.40e-30 114
MsG0180005750.01.T01 MTR_2g105290 36.184 152 87 2 4 152 24 168 8.04e-30 108
MsG0180005750.01.T01 MTR_7g028448 41.304 138 69 3 5 142 25 150 1.56e-29 107
MsG0180005750.01.T01 MTR_4g036915 41.304 138 69 3 5 142 25 150 1.56e-29 107
MsG0180005750.01.T01 MTR_8g086290 37.333 150 84 2 4 150 24 166 2.64e-29 107
MsG0180005750.01.T01 MTR_4g127140 35.802 162 82 4 5 152 25 178 2.20e-28 105
MsG0180005750.01.T01 MTR_1g106075 95.745 47 2 0 150 196 85 131 1.34e-26 99.0
MsG0180005750.01.T01 MTR_3g067875 80.357 56 11 0 1 56 1 56 1.64e-26 96.7
MsG0180005750.01.T01 MTR_3g067915 65.672 67 23 0 43 109 30 96 1.98e-24 92.4
MsG0180005750.01.T01 MTR_3g008630 89.362 47 5 0 150 196 85 131 3.04e-24 92.8
MsG0180005750.01.T01 MTR_8g051580 49.412 85 41 1 8 92 18 100 2.29e-22 89.4
MsG0180005750.01.T01 MTR_3g067870 67.213 61 20 0 1 61 85 145 1.13e-21 87.0
MsG0180005750.01.T01 MTR_1g047550 48.235 85 42 1 8 92 18 100 1.22e-21 87.4
MsG0180005750.01.T01 MTR_8g079502 47.059 85 43 1 8 92 18 100 6.55e-21 85.9
MsG0180005750.01.T01 MTR_1g054265 49.412 85 41 1 8 92 18 100 7.75e-21 85.1
MsG0180005750.01.T01 MTR_4g131030 41.000 100 44 2 8 92 18 117 1.06e-20 85.9
MsG0180005750.01.T01 MTR_1g063160 50.575 87 41 2 8 92 18 104 1.44e-20 84.7
MsG0180005750.01.T01 MTR_8g046350 40.171 117 58 3 8 119 18 127 2.97e-20 83.6
MsG0180005750.01.T01 MTR_4g094632 38.462 104 61 2 1 103 11 112 7.43e-16 72.0
MsG0180005750.01.T01 MTR_4g102530 40.000 85 48 1 1 82 11 95 6.53e-15 70.5
MsG0180005750.01.T01 MTR_4g093970 32.903 155 81 4 1 134 37 189 1.10e-14 70.5
MsG0180005750.01.T01 MTR_7g075870 36.275 102 63 1 1 102 11 110 7.68e-14 67.8
MsG0180005750.01.T01 MTR_8g033220 30.864 162 93 6 1 149 11 166 7.84e-14 67.8
MsG0180005750.01.T01 MTR_8g033220 30.864 162 93 6 1 149 11 166 9.14e-14 67.8
MsG0180005750.01.T01 MTR_1g053070 30.055 183 109 5 1 168 11 189 1.04e-13 67.8
MsG0180005750.01.T01 MTR_4g094638 53.448 58 27 0 3 60 13 70 1.10e-13 66.6
MsG0180005750.01.T01 MTR_3g005530 47.458 59 31 0 1 59 11 69 2.49e-13 66.2
MsG0180005750.01.T01 MTR_5g032150 34.375 128 64 5 1 114 11 132 3.04e-13 66.2
MsG0180005750.01.T01 MTR_5g032520 35.156 128 63 5 1 114 11 132 3.09e-13 66.2
MsG0180005750.01.T01 MTR_6g464720 50.000 60 29 1 1 59 11 70 6.41e-13 65.9
MsG0180005750.01.T01 MTR_8g022970 33.824 136 83 3 10 142 36 167 1.01e-12 63.9
MsG0180005750.01.T01 MTR_8g033270 33.333 159 90 5 1 150 11 162 1.09e-12 65.1
MsG0180005750.01.T01 MTR_5g066180 47.458 59 31 0 1 59 11 69 1.48e-12 64.3
MsG0180005750.01.T01 MTR_7g075870 35.922 103 63 2 1 102 11 111 1.54e-12 63.9
MsG0180005750.01.T01 MTR_1g101970 49.123 57 29 0 3 59 13 69 1.89e-12 63.5
MsG0180005750.01.T01 MTR_3g452380 38.462 91 46 1 1 91 26 106 3.30e-12 63.5
MsG0180005750.01.T01 MTR_3g437790 30.282 142 84 4 9 142 30 164 3.57e-12 62.8
MsG0180005750.01.T01 MTR_2g009890 47.458 59 31 0 1 59 11 69 3.68e-12 63.9
MsG0180005750.01.T01 MTR_3g109930 30.000 140 82 4 10 142 20 150 5.11e-12 62.0
MsG0180005750.01.T01 MTR_5g031000 47.458 59 31 0 1 59 11 69 8.77e-12 62.4
MsG0180005750.01.T01 MTR_2g017865 37.895 95 58 1 1 95 26 119 9.43e-12 62.4
MsG0180005750.01.T01 MTR_5g031000 47.458 59 31 0 1 59 11 69 9.73e-12 62.0
MsG0180005750.01.T01 MTR_4g109830 46.667 60 31 1 1 59 11 70 1.31e-11 61.6
MsG0180005750.01.T01 MTR_0003s0590 47.458 59 31 0 1 59 11 69 2.22e-11 61.6
MsG0180005750.01.T01 MTR_8g087860 45.763 59 32 0 1 59 27 85 3.27e-11 60.8
MsG0180005750.01.T01 MTR_3g102570 38.710 93 54 3 1 92 11 101 3.70e-11 61.2
MsG0180005750.01.T01 MTR_7g075850 29.560 159 97 5 1 150 11 163 9.20e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005750.01.T01 AT5G60440 53.049 164 71 3 1 158 16 179 1.06e-48 160
MsG0180005750.01.T01 AT2G24840 51.020 147 65 4 4 146 75 218 5.06e-39 134
MsG0180005750.01.T01 AT1G01530 44.966 149 73 4 1 145 16 159 1.32e-32 117
MsG0180005750.01.T01 AT1G65360 38.961 154 89 3 1 152 16 166 2.84e-30 111
MsG0180005750.01.T01 AT4G36590 43.046 151 76 3 1 143 16 164 7.05e-29 108
MsG0180005750.01.T01 AT2G34440 44.330 97 53 1 8 104 18 113 1.63e-22 89.7
MsG0180005750.01.T01 AT3G66656 41.748 103 56 1 8 106 18 120 4.84e-20 83.6
MsG0180005750.01.T01 AT1G49975 72.340 47 13 0 150 196 83 129 4.46e-19 79.7
MsG0180005750.01.T01 AT1G72350 54.098 61 26 1 4 64 55 113 6.73e-17 76.3
MsG0180005750.01.T01 AT4G22950 46.377 69 37 0 1 69 11 79 2.06e-16 73.6
MsG0180005750.01.T01 AT2G45660 51.667 60 29 0 1 60 11 70 8.73e-16 71.6
MsG0180005750.01.T01 AT4G22950 38.235 102 60 1 1 102 11 109 1.18e-15 72.8
MsG0180005750.01.T01 AT4G22950 38.235 102 60 1 1 102 11 109 1.18e-15 72.8
MsG0180005750.01.T01 AT1G28460 30.201 149 100 2 9 153 25 173 1.65e-15 71.6
MsG0180005750.01.T01 AT2G45660 51.667 60 29 0 1 60 11 70 3.78e-15 71.2
MsG0180005750.01.T01 AT1G29962 30.921 152 98 4 9 153 25 176 4.32e-15 70.5
MsG0180005750.01.T01 AT3G04100 26.490 151 105 3 9 154 31 180 7.00e-15 70.5
MsG0180005750.01.T01 AT4G24540 34.532 139 74 4 1 139 11 132 1.08e-14 70.1
MsG0180005750.01.T01 AT2G22540 35.878 131 60 3 1 115 11 133 1.68e-13 67.0
MsG0180005750.01.T01 AT2G22540 35.878 131 60 3 1 115 11 133 1.68e-13 67.0
MsG0180005750.01.T01 AT3G61120 50.847 59 29 0 1 59 11 69 2.23e-13 67.0
MsG0180005750.01.T01 AT4G37940 53.846 52 24 0 8 59 18 69 3.00e-13 66.2
MsG0180005750.01.T01 AT4G37940 53.846 52 24 0 8 59 18 69 3.57e-13 65.9
MsG0180005750.01.T01 AT1G17310 48.387 62 30 1 8 69 64 123 4.90e-13 65.5
MsG0180005750.01.T01 AT1G17310 48.387 62 30 1 8 69 75 134 6.15e-13 65.5
MsG0180005750.01.T01 AT4G37940 47.458 59 31 0 1 59 11 69 6.84e-13 64.3
MsG0180005750.01.T01 AT3G57230 44.068 59 33 0 1 59 11 69 7.42e-13 63.5
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 11 69 8.29e-13 65.1
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 12 70 8.57e-13 65.1
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 11 69 8.98e-13 64.7
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 21 79 1.02e-12 65.1
MsG0180005750.01.T01 AT4G11880 45.312 64 34 1 1 63 11 74 1.20e-12 63.9
MsG0180005750.01.T01 AT4G11880 45.312 64 34 1 1 63 11 74 1.20e-12 63.9
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 37 95 1.21e-12 65.1
MsG0180005750.01.T01 AT4G09960 45.763 59 32 0 1 59 106 164 1.37e-12 65.5
MsG0180005750.01.T01 AT4G11880 45.312 64 34 1 1 63 11 74 1.80e-12 63.9
MsG0180005750.01.T01 AT4G11880 45.312 64 34 1 1 63 11 74 1.80e-12 63.9
MsG0180005750.01.T01 AT2G45650 49.153 59 30 0 1 59 11 69 2.49e-12 63.9
MsG0180005750.01.T01 AT3G57230 44.068 59 33 0 1 59 11 69 2.68e-12 63.9
MsG0180005750.01.T01 AT3G57230 44.068 59 33 0 1 59 11 69 2.68e-12 63.9
MsG0180005750.01.T01 AT2G22630 50.000 52 26 0 8 59 18 69 3.18e-12 63.5
MsG0180005750.01.T01 AT2G22630 50.000 52 26 0 8 59 18 69 3.18e-12 63.5
MsG0180005750.01.T01 AT5G51870 49.153 59 30 0 1 59 11 69 4.19e-12 62.8
MsG0180005750.01.T01 AT5G51870 49.153 59 30 0 1 59 11 69 5.69e-12 62.0
MsG0180005750.01.T01 AT5G51870 49.153 59 30 0 1 59 11 69 6.33e-12 62.4
MsG0180005750.01.T01 AT5G51870 49.153 59 30 0 1 59 21 79 8.06e-12 62.4
MsG0180005750.01.T01 AT5G51860 47.458 59 31 0 1 59 11 69 8.96e-12 62.0
MsG0180005750.01.T01 AT3G30260 48.387 62 29 1 1 62 11 69 9.96e-12 62.4
MsG0180005750.01.T01 AT5G10140 50.000 60 29 1 1 59 11 70 1.10e-11 60.8
MsG0180005750.01.T01 AT1G28450 28.105 153 100 4 9 151 25 177 1.23e-11 61.2
MsG0180005750.01.T01 AT5G51870 49.153 59 30 0 1 59 34 92 1.27e-11 61.2
MsG0180005750.01.T01 AT5G51860 47.458 59 31 0 1 59 11 69 1.28e-11 61.6
MsG0180005750.01.T01 AT5G13790 39.286 84 42 1 1 84 11 85 1.60e-11 62.0
MsG0180005750.01.T01 AT3G54340 44.262 61 32 1 1 59 11 71 1.91e-11 61.2
MsG0180005750.01.T01 AT5G10140 50.000 60 29 1 1 59 11 70 1.97e-11 60.5
MsG0180005750.01.T01 AT5G10140 50.000 60 29 1 1 59 11 70 2.03e-11 60.5
MsG0180005750.01.T01 AT1G22130 34.524 84 54 1 1 83 11 94 2.16e-11 62.0
MsG0180005750.01.T01 AT4G18960 36.264 91 48 1 1 91 27 107 2.38e-11 61.2
MsG0180005750.01.T01 AT5G10140 50.000 60 29 1 1 59 11 70 2.39e-11 60.5
MsG0180005750.01.T01 AT2G14210 45.000 60 32 1 1 59 11 70 2.51e-11 61.2
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 2.62e-11 59.7
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 2.62e-11 59.7
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 2.62e-11 59.7
MsG0180005750.01.T01 AT5G13790 47.458 59 31 0 1 59 11 69 3.31e-11 61.2
MsG0180005750.01.T01 AT2G14210 45.000 60 32 1 1 59 11 70 3.32e-11 60.8
MsG0180005750.01.T01 AT2G42830 45.763 59 32 0 1 59 26 84 3.45e-11 60.8
MsG0180005750.01.T01 AT2G42830 45.763 59 32 0 1 59 26 84 3.49e-11 60.8
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 3.86e-11 58.2
MsG0180005750.01.T01 AT2G22540 35.115 131 56 4 1 115 11 128 4.39e-11 60.5
MsG0180005750.01.T01 AT3G58780 34.513 113 52 2 1 113 26 116 4.83e-11 60.5
MsG0180005750.01.T01 AT1G77980 35.714 84 53 1 1 83 11 94 5.04e-11 60.8
MsG0180005750.01.T01 AT3G58780 34.513 113 52 2 1 113 32 122 5.19e-11 60.5
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 5.55e-11 58.9
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 5.55e-11 58.9
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 5.55e-11 58.9
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 5.55e-11 58.9
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 5.55e-11 58.9
MsG0180005750.01.T01 AT1G77950 46.667 60 30 2 8 66 18 76 6.35e-11 60.1
MsG0180005750.01.T01 AT1G77950 46.667 60 30 2 8 66 18 76 6.35e-11 60.1
MsG0180005750.01.T01 AT1G77950 46.667 60 30 2 8 66 18 76 6.35e-11 60.1
MsG0180005750.01.T01 AT1G77950 46.667 60 30 2 8 66 18 76 6.35e-11 60.1
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 7.07e-11 59.7
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 7.07e-11 59.7
MsG0180005750.01.T01 AT5G62165 42.373 59 34 0 1 59 11 69 7.07e-11 59.7
MsG0180005750.01.T01 AT1G47760 30.973 113 61 4 8 117 18 116 7.78e-11 58.9

Find 50 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCATGATACCATTGTTT+TGG 0.308591 1:-95663560 None:intergenic
AGTCGATCGAGACTCAATTT+TGG 0.334702 1:+95663697 MsG0180005750.01.T01:CDS
TGGCAGGCTGGTCCCGTTGA+TGG 0.336804 1:+95663717 MsG0180005750.01.T01:CDS
GTCCCGTTGATGGGATGAAC+AGG 0.345518 1:+95663727 MsG0180005750.01.T01:CDS
GATTACTTTGAGTTCGTAGA+AGG 0.353863 1:+95666453 MsG0180005750.01.T01:CDS
TGAATTATTCAAGAAAGCTT+TGG 0.360061 1:+95663758 MsG0180005750.01.T01:CDS
CTCTCGTTGTTTACTCACCT+GGG 0.364999 1:+95663466 MsG0180005750.01.T01:CDS
GCTCTCGTTGTTTACTCACC+TGG 0.366410 1:+95663465 MsG0180005750.01.T01:CDS
TCTATAACTGTACCAACATT+GGG 0.381757 1:-95663513 None:intergenic
CAGAAAAGGGTATCCTTGAT+TGG 0.408398 1:+95666514 MsG0180005750.01.T01:CDS
TTTCTTGAATAATTCAAGTT+GGG 0.427736 1:-95663751 None:intergenic
AACTCAGATCAACCACCTAT+TGG 0.431542 1:+95663632 MsG0180005750.01.T01:CDS
GAAGCTTTCAGAAGCAGAAA+AGG 0.433331 1:+95666500 MsG0180005750.01.T01:CDS
TTGTCGCACATCATGCTGAT+AGG 0.436183 1:+95663796 MsG0180005750.01.T01:CDS
ATCTATAACTGTACCAACAT+TGG 0.439913 1:-95663514 None:intergenic
GTTTCTTCTCGATGTCCAAT+AGG 0.442800 1:-95663647 None:intergenic
GTTTGCAAGGAAAGGAAGAG+GGG 0.447267 1:+95666478 MsG0180005750.01.T01:CDS
GGGTTTGCAAGGAAAGGAAG+AGG 0.455002 1:+95666476 MsG0180005750.01.T01:CDS
TGTTAGCTTTAAGCCAATCA+AGG 0.469309 1:-95666527 None:intergenic
GGCAGGCTGGTCCCGTTGAT+GGG 0.472844 1:+95663718 MsG0180005750.01.T01:CDS
CTTTCTTGAATAATTCAAGT+TGG 0.475927 1:-95663752 None:intergenic
ATTATTCAAGAAAGCTTTGG+AGG 0.484545 1:+95663761 MsG0180005750.01.T01:CDS
GCCCTGTTCATCCCATCAAC+GGG 0.488608 1:-95663729 None:intergenic
GGCCCTGTTCATCCCATCAA+CGG 0.495905 1:-95663730 None:intergenic
GGTTTGCAAGGAAAGGAAGA+GGG 0.496880 1:+95666477 MsG0180005750.01.T01:CDS
TTATTACAAGCGTAATTACA+AGG 0.507139 1:+95666431 MsG0180005750.01.T01:CDS
TGTTTACTCACCTGGGGAGA+AGG 0.523645 1:+95663473 MsG0180005750.01.T01:CDS
ACAGAGGGTGCAAAGCTCAC+TGG 0.525840 1:-95663430 None:intergenic
TCATTTGGCCACCCCAATGT+TGG 0.527088 1:+95663501 MsG0180005750.01.T01:CDS
CTTTCTCGAAGCGTCGTAGT+GGG 0.527697 1:+95663394 MsG0180005750.01.T01:CDS
TCGAGAAAGTCACTTGCAAG+TGG 0.561151 1:-95663380 None:intergenic
AATGAAAACACCTTCTCCCC+AGG 0.570332 1:-95663483 None:intergenic
TACTTTGAGTTCGTAGAAGG+GGG 0.574786 1:+95666456 MsG0180005750.01.T01:CDS
ACTTTCTCGAAGCGTCGTAG+TGG 0.583955 1:+95663393 MsG0180005750.01.T01:CDS
TCTTCTCGATGTCCAATAGG+TGG 0.584648 1:-95663644 None:intergenic
AGTGAGCTTTGCACCCTCTG+TGG 0.587031 1:+95663432 MsG0180005750.01.T01:CDS
ATTACTTTGAGTTCGTAGAA+GGG 0.593520 1:+95666454 MsG0180005750.01.T01:CDS
AGCAACATCTGCACCACAGA+GGG 0.595144 1:-95663445 None:intergenic
TCCCGTTGATGGGATGAACA+GGG 0.598148 1:+95663728 MsG0180005750.01.T01:CDS
AAGCTTTCAGAAGCAGAAAA+GGG 0.600223 1:+95666501 MsG0180005750.01.T01:CDS
GCTCACGCACGTTGGCGCTG+CGG 0.601933 1:-95663596 None:intergenic
TTACTTTGAGTTCGTAGAAG+GGG 0.603502 1:+95666455 MsG0180005750.01.T01:CDS
TCTCGTTGTTTACTCACCTG+GGG 0.615216 1:+95663467 MsG0180005750.01.T01:CDS
TCTCGATCGACTTACGCAAG+TGG 0.621173 1:-95663686 None:intergenic
CGAGTCCCATCCCAAAACAA+TGG 0.645088 1:+95663549 MsG0180005750.01.T01:CDS
AGTATTAAGCTCACGCACGT+TGG 0.655956 1:-95663604 None:intergenic
TAACTGTACCAACATTGGGG+TGG 0.676065 1:-95663509 None:intergenic
CTATAACTGTACCAACATTG+GGG 0.686159 1:-95663512 None:intergenic
GAGCAACATCTGCACCACAG+AGG 0.729838 1:-95663446 None:intergenic
TGGTATCATGCAATTCACTG+AGG 0.762423 1:+95663569 MsG0180005750.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTGTAAAAAAAAGAAAA+AGG - Chr1:95664159-95664178 None:intergenic 10.0%
!!! AATTTGATAATTAACTTTAT+CGG + Chr1:95664361-95664380 MsG0180005750.01.T01:intron 10.0%
!!! ATATTGTATTTTGAAATTAT+TGG + Chr1:95664231-95664250 MsG0180005750.01.T01:intron 10.0%
!!! TAAAGTTAATTATCAAATTT+TGG - Chr1:95664360-95664379 None:intergenic 10.0%
!!! TGTTTTAAATTAATTTCAAT+TGG + Chr1:95664096-95664115 MsG0180005750.01.T01:intron 10.0%
!!! TTTTGTTTGTTAAAATATAA+AGG - Chr1:95664514-95664533 None:intergenic 10.0%
!! TAAACTAAAAACTAAAACTA+AGG - Chr1:95664802-95664821 None:intergenic 15.0%
!!! AGTTTTTATTTTCTAATAGA+TGG + Chr1:95665450-95665469 MsG0180005750.01.T01:intron 15.0%
!!! TTTTCTTGAAAAATCTAAAA+TGG - Chr1:95665586-95665605 None:intergenic 15.0%
!! CATTTCTCTTTAGTAAATTA+AGG + Chr1:95665398-95665417 MsG0180005750.01.T01:intron 20.0%
!! GTTAATAAGATAGTTTATAG+CGG - Chr1:95664488-95664507 None:intergenic 20.0%
!! TTAACAAATTGTAAAGAAGA+AGG + Chr1:95665620-95665639 MsG0180005750.01.T01:intron 20.0%
!!! TAACCTAGTTTTATTTATGT+TGG + Chr1:95664131-95664150 MsG0180005750.01.T01:intron 20.0%
!!! TAGATTTTGTTTAGTGAAAT+GGG + Chr1:95664288-95664307 MsG0180005750.01.T01:intron 20.0%
!!! TCAATTTTGAAAAGACAATA+TGG + Chr1:95665001-95665020 MsG0180005750.01.T01:intron 20.0%
!!! TTAGATTTTGTTTAGTGAAA+TGG + Chr1:95664287-95664306 MsG0180005750.01.T01:intron 20.0%
!!! TTTCTTGAATAATTCAAGTT+GGG - Chr1:95663754-95663773 None:intergenic 20.0%
! AATGACCTAATACATACTAA+TGG + Chr1:95664417-95664436 MsG0180005750.01.T01:intron 25.0%
! AGAATATTTGAAGAAAACAG+AGG + Chr1:95666295-95666314 MsG0180005750.01.T01:intron 25.0%
! ATAGTTGCATACATATTGAA+AGG - Chr1:95664649-95664668 None:intergenic 25.0%
! ATGACCTAATACATACTAAT+GGG + Chr1:95664418-95664437 MsG0180005750.01.T01:intron 25.0%
! CCTTCAAAAAAAAACATTTG+AGG + Chr1:95665501-95665520 MsG0180005750.01.T01:intron 25.0%
! CTTTCTTGAATAATTCAAGT+TGG - Chr1:95663755-95663774 None:intergenic 25.0%
! GATCCAACATAAATAAAACT+AGG - Chr1:95664137-95664156 None:intergenic 25.0%
! GCTTAATAAACTTATCCTAA+AGG - Chr1:95665774-95665793 None:intergenic 25.0%
! GCTTCATATGTATGTATATA+AGG - Chr1:95665720-95665739 None:intergenic 25.0%
! TAAAAAAGCTTGTACAAGAT+GGG - Chr1:95664204-95664223 None:intergenic 25.0%
! TAAACCCATTAGTATGTATT+AGG - Chr1:95664425-95664444 None:intergenic 25.0%
! TCAAAAAAAAACATTTGAGG+TGG + Chr1:95665504-95665523 MsG0180005750.01.T01:intron 25.0%
! TGAATTATTCAAGAAAGCTT+TGG + Chr1:95663758-95663777 MsG0180005750.01.T01:CDS 25.0%
! TGCAAGTTTAAACTAAACTA+AGG - Chr1:95664760-95664779 None:intergenic 25.0%
! TTAAAAAAGCTTGTACAAGA+TGG - Chr1:95664205-95664224 None:intergenic 25.0%
! TTATTACAAGCGTAATTACA+AGG + Chr1:95666431-95666450 MsG0180005750.01.T01:CDS 25.0%
! TTGAGGTGGAAATTAAATTA+GGG + Chr1:95665518-95665537 MsG0180005750.01.T01:intron 25.0%
! TTGTGATGTATCAAATCAAA+TGG - Chr1:95664618-95664637 None:intergenic 25.0%
! TTTGACTAAAACTCGATAAA+AGG - Chr1:95665336-95665355 None:intergenic 25.0%
!! AACCATTTTCAAAAAAACAG+AGG - Chr1:95663855-95663874 None:intergenic 25.0%
!! ATTTTCAAAAAAACAGAGGA+AGG - Chr1:95663851-95663870 None:intergenic 25.0%
!! TTCAAAATTGAGACAACTTT+TGG - Chr1:95664992-95665011 None:intergenic 25.0%
!! TTTGAGGTGGAAATTAAATT+AGG + Chr1:95665517-95665536 MsG0180005750.01.T01:intron 25.0%
!! TTTTCAAAAAAACAGAGGAA+GGG - Chr1:95663850-95663869 None:intergenic 25.0%
!!! CCTCAAATGTTTTTTTTTGA+AGG - Chr1:95665504-95665523 None:intergenic 25.0%
!!! TTCCTCTGTTTTTTTGAAAA+TGG + Chr1:95663850-95663869 MsG0180005750.01.T01:intron 25.0%
!!! TTGTTTGGCTTTAACAATAT+GGG + Chr1:95663970-95663989 MsG0180005750.01.T01:intron 25.0%
!!! TTTGTTTGGCTTTAACAATA+TGG + Chr1:95663969-95663988 MsG0180005750.01.T01:intron 25.0%
AAAAATGACAGAGGTAAGTA+GGG + Chr1:95666329-95666348 MsG0180005750.01.T01:intron 30.0%
AAATTGACACAGACATCTTA+AGG - Chr1:95664051-95664070 None:intergenic 30.0%
AAGCAAACTAAAAAGAGAAG+AGG + Chr1:95665790-95665809 MsG0180005750.01.T01:intron 30.0%
AATATGTATGCAACTATACG+TGG + Chr1:95664652-95664671 MsG0180005750.01.T01:intron 30.0%
ACAAATTGTAAAGAAGAAGG+TGG + Chr1:95665623-95665642 MsG0180005750.01.T01:intron 30.0%
ACATCTTAAGGCGAATTTAA+GGG - Chr1:95664039-95664058 None:intergenic 30.0%
ACTCATTGCATTTGAACTTT+AGG - Chr1:95664537-95664556 None:intergenic 30.0%
ATCTATAACTGTACCAACAT+TGG - Chr1:95663517-95663536 None:intergenic 30.0%
TAATTCTTATCGTTGAGCTT+AGG - Chr1:95664710-95664729 None:intergenic 30.0%
TCTATAACTGTACCAACATT+GGG - Chr1:95663516-95663535 None:intergenic 30.0%
TTGTTAAAGCCAAACAAATG+AGG - Chr1:95663967-95663986 None:intergenic 30.0%
! ATTACTTTGAGTTCGTAGAA+GGG + Chr1:95666454-95666473 MsG0180005750.01.T01:CDS 30.0%
! ATTATTCAAGAAAGCTTTGG+AGG + Chr1:95663761-95663780 MsG0180005750.01.T01:CDS 30.0%
! ATTGCATGATACCATTGTTT+TGG - Chr1:95663563-95663582 None:intergenic 30.0%
! TGGTCTTAAACTAAAGACTA+GGG - Chr1:95664972-95664991 None:intergenic 30.0%
! TTGCATGATACCATTGTTTT+GGG - Chr1:95663562-95663581 None:intergenic 30.0%
!! TGTTTGGCTTTAACAATATG+GGG + Chr1:95663971-95663990 MsG0180005750.01.T01:intron 30.0%
!! TTGGTCTTAAACTAAAGACT+AGG - Chr1:95664973-95664992 None:intergenic 30.0%
!! TTTAATCACAGTTTTGTGTG+TGG + Chr1:95666394-95666413 MsG0180005750.01.T01:intron 30.0%
AAAATGACAGAGGTAAGTAG+GGG + Chr1:95666330-95666349 MsG0180005750.01.T01:intron 35.0%
AACAAATGAGGTTGCAACAT+AGG - Chr1:95663955-95663974 None:intergenic 35.0%
AACAAGGAGAAAAATGACAG+AGG + Chr1:95666320-95666339 MsG0180005750.01.T01:intron 35.0%
AAGCTTTCAGAAGCAGAAAA+GGG + Chr1:95666501-95666520 MsG0180005750.01.T01:CDS 35.0%
ACGTCAATCAGCTTAAACTA+AGG + Chr1:95665042-95665061 MsG0180005750.01.T01:intron 35.0%
ACTCGTGTAGTGAATATTTG+AGG + Chr1:95665476-95665495 MsG0180005750.01.T01:intron 35.0%
ATGTTGCAACCTCATTTGTT+TGG + Chr1:95663955-95663974 MsG0180005750.01.T01:intron 35.0%
CATATGAAGCACAATGTAGT+AGG + Chr1:95665730-95665749 MsG0180005750.01.T01:intron 35.0%
CATGTGTCAAAATCTGATTG+GGG + Chr1:95664909-95664928 MsG0180005750.01.T01:intron 35.0%
CCACATGTTCATTATCCTTT+AGG + Chr1:95665756-95665775 MsG0180005750.01.T01:intron 35.0%
CCATGTGTCAAAATCTGATT+GGG + Chr1:95664908-95664927 MsG0180005750.01.T01:intron 35.0%
CCTAAAGGATAATGAACATG+TGG - Chr1:95665759-95665778 None:intergenic 35.0%
CTATAACTGTACCAACATTG+GGG - Chr1:95663515-95663534 None:intergenic 35.0%
CTCAAAAGACATACATTGGA+TGG - Chr1:95664593-95664612 None:intergenic 35.0%
GAAAAATGACAGAGGTAAGT+AGG + Chr1:95666328-95666347 MsG0180005750.01.T01:intron 35.0%
GAAGAAAACAGAGGAAAACA+AGG + Chr1:95666304-95666323 MsG0180005750.01.T01:intron 35.0%
GACATCTTAAGGCGAATTTA+AGG - Chr1:95664040-95664059 None:intergenic 35.0%
GGAACTCAAAAGACATACAT+TGG - Chr1:95664597-95664616 None:intergenic 35.0%
GGTCTTAAACTAAAGACTAG+GGG - Chr1:95664971-95664990 None:intergenic 35.0%
GTCTTAAACTAAAGACTAGG+GGG - Chr1:95664970-95664989 None:intergenic 35.0%
GTTAATGGCACTAACAGTTA+CGG + Chr1:95665838-95665857 MsG0180005750.01.T01:intron 35.0%
TAATCAAATGTGACTGTGTC+AGG - Chr1:95666136-95666155 None:intergenic 35.0%
TATAGGGCAAACCATGTTAA+TGG + Chr1:95665823-95665842 MsG0180005750.01.T01:intron 35.0%
TCAAAATCTGATTGGGGTAA+TGG + Chr1:95664915-95664934 MsG0180005750.01.T01:intron 35.0%
TCAGATCAAAAGAATCTGGA+GGG - Chr1:95664015-95664034 None:intergenic 35.0%
TTTGAAAAGACAATATGGCC+AGG + Chr1:95665006-95665025 MsG0180005750.01.T01:intron 35.0%
! AACTGTTAGTGCCATTAACA+TGG - Chr1:95665837-95665856 None:intergenic 35.0%
! GATTACTTTGAGTTCGTAGA+AGG + Chr1:95666453-95666472 MsG0180005750.01.T01:CDS 35.0%
! GGATTCTGAAAAAACTGTGT+TGG - Chr1:95663934-95663953 None:intergenic 35.0%
! TTACTTTGAGTTCGTAGAAG+GGG + Chr1:95666455-95666474 MsG0180005750.01.T01:CDS 35.0%
!! GTTTGGCTTTAACAATATGG+GGG + Chr1:95663972-95663991 MsG0180005750.01.T01:intron 35.0%
!! TGTTAGCTTTAAGCCAATCA+AGG - Chr1:95666530-95666549 None:intergenic 35.0%
!! TTTGGCTTTAACAATATGGG+GGG + Chr1:95663973-95663992 MsG0180005750.01.T01:intron 35.0%
!!! ATGATACCATTGTTTTGGGA+TGG - Chr1:95663558-95663577 None:intergenic 35.0%
!!! CGACATGAACATGTTTTTAG+TGG + Chr1:95666227-95666246 MsG0180005750.01.T01:intron 35.0%
!!! TGATACCATTGTTTTGGGAT+GGG - Chr1:95663557-95663576 None:intergenic 35.0%
AACATGGAATTTGGAAGGAG+AGG + Chr1:95665938-95665957 MsG0180005750.01.T01:intron 40.0%
AACTCAGATCAACCACCTAT+TGG + Chr1:95663632-95663651 MsG0180005750.01.T01:CDS 40.0%
AAGAGGCGATGAGTTCTATA+GGG + Chr1:95665807-95665826 MsG0180005750.01.T01:intron 40.0%
ACATACATTGGATGGAAGAG+GGG - Chr1:95664585-95664604 None:intergenic 40.0%
AGACATACATTGGATGGAAG+AGG - Chr1:95664587-95664606 None:intergenic 40.0%
ATTATGAACTGCCTGCACAT+TGG - Chr1:95665882-95665901 None:intergenic 40.0%
ATTTGAGCTTGTGGAGGATT+TGG - Chr1:95663907-95663926 None:intergenic 40.0%
CAGCTAAGCTCAACGATAAA+AGG - Chr1:95665306-95665325 None:intergenic 40.0%
CTCAGATCAAAAGAATCTGG+AGG - Chr1:95664016-95664035 None:intergenic 40.0%
CTTCTGAATGTATGTGTGTC+TGG + Chr1:95666097-95666116 MsG0180005750.01.T01:intron 40.0%
GAAGCTTTCAGAAGCAGAAA+AGG + Chr1:95666500-95666519 MsG0180005750.01.T01:CDS 40.0%
GACATACATTGGATGGAAGA+GGG - Chr1:95664586-95664605 None:intergenic 40.0%
GAGGGGTTGAAAAACATCAT+AGG - Chr1:95664568-95664587 None:intergenic 40.0%
GCCATGTGTCAAAATCTGAT+TGG + Chr1:95664907-95664926 MsG0180005750.01.T01:intron 40.0%
GTTGGAAACATTTGAGCTTG+TGG - Chr1:95663916-95663935 None:intergenic 40.0%
GTTTCTTCTCGATGTCCAAT+AGG - Chr1:95663650-95663669 None:intergenic 40.0%
TCTCCTTCCAAATTCCATGT+TGG - Chr1:95665939-95665958 None:intergenic 40.0%
TGGTATCATGCAATTCACTG+AGG + Chr1:95663569-95663588 MsG0180005750.01.T01:CDS 40.0%
! AGAAGTGATGACGCTACATA+GGG - Chr1:95666082-95666101 None:intergenic 40.0%
! AGTCGATCGAGACTCAATTT+TGG + Chr1:95663697-95663716 MsG0180005750.01.T01:CDS 40.0%
! ATGATGGAGAGGCATATTAG+AGG - Chr1:95663881-95663900 None:intergenic 40.0%
! TACTTTGAGTTCGTAGAAGG+GGG + Chr1:95666456-95666475 MsG0180005750.01.T01:CDS 40.0%
!! CAGAAAAGGGTATCCTTGAT+TGG + Chr1:95666514-95666533 MsG0180005750.01.T01:CDS 40.0%
!! CCCAATCAGATTTTGACACA+TGG - Chr1:95664911-95664930 None:intergenic 40.0%
AACAGAGGAAGGGTTTGAGT+AGG - Chr1:95663840-95663859 None:intergenic 45.0%
AATGAAAACACCTTCTCCCC+AGG - Chr1:95663486-95663505 None:intergenic 45.0%
AGAAGCAATGTCCTTGACTC+AGG - Chr1:95666007-95666026 None:intergenic 45.0%
AGCACCACCAACATGGAATT+TGG + Chr1:95665929-95665948 MsG0180005750.01.T01:intron 45.0%
AGTATTAAGCTCACGCACGT+TGG - Chr1:95663607-95663626 None:intergenic 45.0%
ATTTCAGTGCCATAGTGCCA+TGG - Chr1:95664943-95664962 None:intergenic 45.0%
CCACCAACATGGAATTTGGA+AGG + Chr1:95665933-95665952 MsG0180005750.01.T01:intron 45.0%
CCTTCCAAATTCCATGTTGG+TGG - Chr1:95665936-95665955 None:intergenic 45.0%
CTCTCGTTGTTTACTCACCT+GGG + Chr1:95663466-95663485 MsG0180005750.01.T01:CDS 45.0%
GAAGAGGCGATGAGTTCTAT+AGG + Chr1:95665806-95665825 MsG0180005750.01.T01:intron 45.0%
GAAGCAATGTCCTTGACTCA+GGG - Chr1:95666006-95666025 None:intergenic 45.0%
GGAAACATTTGAGCTTGTGG+AGG - Chr1:95663913-95663932 None:intergenic 45.0%
GGGCTCAGATCAAAAGAATC+TGG - Chr1:95664019-95664038 None:intergenic 45.0%
GGTTTGCAAGGAAAGGAAGA+GGG + Chr1:95666477-95666496 MsG0180005750.01.T01:CDS 45.0%
GTATGCATCATCCAATGTGC+AGG + Chr1:95665868-95665887 MsG0180005750.01.T01:intron 45.0%
GTTTGCAAGGAAAGGAAGAG+GGG + Chr1:95666478-95666497 MsG0180005750.01.T01:CDS 45.0%
TAACTGTACCAACATTGGGG+TGG - Chr1:95663512-95663531 None:intergenic 45.0%
TCAGCATCGTGTTCTCTCAT+AGG + Chr1:95666199-95666218 MsG0180005750.01.T01:intron 45.0%
TCGAGAAAGTCACTTGCAAG+TGG - Chr1:95663383-95663402 None:intergenic 45.0%
TCTCGTTGTTTACTCACCTG+GGG + Chr1:95663467-95663486 MsG0180005750.01.T01:CDS 45.0%
TCTTCTCGATGTCCAATAGG+TGG - Chr1:95663647-95663666 None:intergenic 45.0%
TGACTGTGTCAGGTCAATGT+CGG - Chr1:95666126-95666145 None:intergenic 45.0%
TTGTCGCACATCATGCTGAT+AGG + Chr1:95663796-95663815 MsG0180005750.01.T01:CDS 45.0%
TTTAACAATATGGGGGGAGG+AGG + Chr1:95663979-95663998 MsG0180005750.01.T01:intron 45.0%
! CAGAAGTGATGACGCTACAT+AGG - Chr1:95666083-95666102 None:intergenic 45.0%
! TGGTGGTGCTTCTCAAAGTT+GGG - Chr1:95665919-95665938 None:intergenic 45.0%
!! ACAGTTTTGTGTGTGGCAGA+GGG + Chr1:95666401-95666420 MsG0180005750.01.T01:intron 45.0%
!! GATCGAGACTCAATTTTGGC+AGG + Chr1:95663701-95663720 MsG0180005750.01.T01:CDS 45.0%
!! GGATTTGGTTGATGATGGAG+AGG - Chr1:95663892-95663911 None:intergenic 45.0%
!! GTGGAGGATTTGGTTGATGA+TGG - Chr1:95663897-95663916 None:intergenic 45.0%
!! TTGGTGGTGCTTCTCAAAGT+TGG - Chr1:95665920-95665939 None:intergenic 45.0%
!! TTTGAGAAGCACCACCAACA+TGG + Chr1:95665922-95665941 MsG0180005750.01.T01:intron 45.0%
!!! GGGGAGAAGGTGTTTTCATT+TGG + Chr1:95663486-95663505 MsG0180005750.01.T01:CDS 45.0%
AGAAGGGGGTTTGCAAGGAA+AGG + Chr1:95666470-95666489 MsG0180005750.01.T01:CDS 50.0%
AGCAACATCTGCACCACAGA+GGG - Chr1:95663448-95663467 None:intergenic 50.0%
CGAGTCCCATCCCAAAACAA+TGG + Chr1:95663549-95663568 MsG0180005750.01.T01:CDS 50.0%
CGTGATGCACACAAACACGT+TGG - Chr1:95664827-95664846 None:intergenic 50.0%
GCTCTCGTTGTTTACTCACC+TGG + Chr1:95663465-95663484 MsG0180005750.01.T01:CDS 50.0%
GGGTTTGCAAGGAAAGGAAG+AGG + Chr1:95666476-95666495 MsG0180005750.01.T01:CDS 50.0%
GTAATGGCACCATGGCACTA+TGG + Chr1:95664931-95664950 MsG0180005750.01.T01:intron 50.0%
TCATTTGGCCACCCCAATGT+TGG + Chr1:95663501-95663520 MsG0180005750.01.T01:CDS 50.0%
TGTTTACTCACCTGGGGAGA+AGG + Chr1:95663473-95663492 MsG0180005750.01.T01:CDS 50.0%
TTCGTAGAAGGGGGTTTGCA+AGG + Chr1:95666465-95666484 MsG0180005750.01.T01:CDS 50.0%
! GACGTTTTTATCGCTGAGCC+TGG - Chr1:95665027-95665046 None:intergenic 50.0%
! GGCTTTAACAATATGGGGGG+AGG + Chr1:95663976-95663995 MsG0180005750.01.T01:intron 50.0%
! TCCCGTTGATGGGATGAACA+GGG + Chr1:95663728-95663747 MsG0180005750.01.T01:CDS 50.0%
! TCTCGATCGACTTACGCAAG+TGG - Chr1:95663689-95663708 None:intergenic 50.0%
! TGATTGGGGTAATGGCACCA+TGG + Chr1:95664923-95664942 MsG0180005750.01.T01:intron 50.0%
!! ACTTTCTCGAAGCGTCGTAG+TGG + Chr1:95663393-95663412 MsG0180005750.01.T01:CDS 50.0%
!! CACAGTTTTGTGTGTGGCAG+AGG + Chr1:95666400-95666419 MsG0180005750.01.T01:intron 50.0%
!! CTTTCTCGAAGCGTCGTAGT+GGG + Chr1:95663394-95663413 MsG0180005750.01.T01:CDS 50.0%
!! GAGACTCAATTTTGGCAGGC+TGG + Chr1:95663705-95663724 MsG0180005750.01.T01:CDS 50.0%
AACAATATGGGGGGAGGAGG+TGG + Chr1:95663982-95664001 MsG0180005750.01.T01:intron 55.0%
AGTGAGCTTTGCACCCTCTG+TGG + Chr1:95663432-95663451 MsG0180005750.01.T01:CDS 55.0%
CAACGCAAGACCCTGAGTCA+AGG + Chr1:95665993-95666012 MsG0180005750.01.T01:intron 55.0%
GAGCAACATCTGCACCACAG+AGG - Chr1:95663449-95663468 None:intergenic 55.0%
GCCCTGTTCATCCCATCAAC+GGG - Chr1:95663732-95663751 None:intergenic 55.0%
GGCCCTGTTCATCCCATCAA+CGG - Chr1:95663733-95663752 None:intergenic 55.0%
TGACTCAGGGTCTTGCGTTG+CGG - Chr1:95665993-95666012 None:intergenic 55.0%
! ACAGAGGGTGCAAAGCTCAC+TGG - Chr1:95663433-95663452 None:intergenic 55.0%
! GTCCCGTTGATGGGATGAAC+AGG + Chr1:95663727-95663746 MsG0180005750.01.T01:CDS 55.0%
!! GGGTTTGAGTAGGAGCACTC+TGG - Chr1:95663830-95663849 None:intergenic 55.0%
AGGGTCTTGCGTTGCGGTTG+CGG - Chr1:95665987-95666006 None:intergenic 60.0%
ATGGGGGGAGGAGGTGGATA+TGG + Chr1:95663988-95664007 MsG0180005750.01.T01:intron 60.0%
TGCGGTTGCGGCGATAACAG+TGG - Chr1:95665975-95665994 None:intergenic 60.0%
! GGCAGGCTGGTCCCGTTGAT+GGG + Chr1:95663718-95663737 MsG0180005750.01.T01:CDS 65.0%
! TGGCAGGCTGGTCCCGTTGA+TGG + Chr1:95663717-95663736 MsG0180005750.01.T01:CDS 65.0%
GCTCACGCACGTTGGCGCTG+CGG - Chr1:95663599-95663618 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95663366 95666554 95663366 ID=MsG0180005750.01;Name=MsG0180005750.01
Chr1 mRNA 95663366 95666554 95663366 ID=MsG0180005750.01.T01;Parent=MsG0180005750.01;Name=MsG0180005750.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|196
Chr1 exon 95663366 95663821 95663366 ID=MsG0180005750.01.T01:exon:19378;Parent=MsG0180005750.01.T01
Chr1 exon 95666420 95666554 95666420 ID=MsG0180005750.01.T01:exon:19379;Parent=MsG0180005750.01.T01
Chr1 CDS 95663366 95663821 95663366 ID=MsG0180005750.01.T01:cds;Parent=MsG0180005750.01.T01
Chr1 CDS 95666420 95666554 95666420 ID=MsG0180005750.01.T01:cds;Parent=MsG0180005750.01.T01
Gene Sequence

>MsG0180005750.01.T01

ATGAGCAACGAAAGCCACTTGCAAGTGACTTTCTCGAAGCGTCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTCTGTGGTGCAGATGTTGCTCTCGTTGTTTACTCACCTGGGGAGAAGGTGTTTTCATTTGGCCACCCCAATGTTGGTACAGTTATAGATCGTTATCTCTCTCGAGTCCCATCCCAAAACAATGGTATCATGCAATTCACTGAGGCTCACCGCAGCGCCAACGTGCGTGAGCTTAATACTCAACTAACTCAGATCAACCACCTATTGGACATCGAGAAGAAACGTGCTGAAGAGTTGAGCCACTTGCGTAAGTCGATCGAGACTCAATTTTGGCAGGCTGGTCCCGTTGATGGGATGAACAGGGCCCAACTTGAATTATTCAAGAAAGCTTTGGAGGAGCTTAAGAAACTTGTCGCACATCATGCTGATAGGCTTAGGGTTGATAGTTATTACAAGCGTAATTACAAGGATTACTTTGAGTTCGTAGAAGGGGGTTTGCAAGGAAAGGAAGAGGGGAAGCTTTCAGAAGCAGAAAAGGGTATCCTTGATTGGCTTAAAGCTAACAAGTGA

Protein sequence

>MsG0180005750.01.T01

MSNESHLQVTFSKRRSGLFKKASELCTLCGADVALVVYSPGEKVFSFGHPNVGTVIDRYLSRVPSQNNGIMQFTEAHRSANVRELNTQLTQINHLLDIEKKRAEELSHLRKSIETQFWQAGPVDGMNRAQLELFKKALEELKKLVAHHADRLRVDSYYKRNYKDYFEFVEGGLQGKEEGKLSEAEKGILDWLKANK*