Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022113.01.T01 | XP_013456765.1 | 91.25 | 160 | 13 | 1 | 1 | 159 | 1 | 160 | 3.06E-79 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022113.01.T01 | A0A072UN48 | 91.250 | 160 | 13 | 1 | 1 | 159 | 1 | 160 | 1.46e-79 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048995.01 | MsG0480022113.01 | 0.830929 | 2.225946e-55 | 2.379477e-52 |
| MsG0080049029.01 | MsG0480022113.01 | 0.826083 | 3.295024e-54 | 3.059021e-51 |
| MsG0080049070.01 | MsG0480022113.01 | 0.851815 | 6.941352e-61 | 1.421906e-57 |
| MsG0180001548.01 | MsG0480022113.01 | 0.864626 | 1.061770e-64 | 3.356571e-61 |
| MsG0180001864.01 | MsG0480022113.01 | 0.807629 | 4.604278e-50 | 2.577253e-47 |
| MsG0180003196.01 | MsG0480022113.01 | 0.865186 | 7.089446e-65 | 2.286013e-61 |
| MsG0180003547.01 | MsG0480022113.01 | 0.824647 | 7.208010e-54 | 6.423784e-51 |
| MsG0180004714.01 | MsG0480022113.01 | 0.830557 | 2.746059e-55 | 2.903128e-52 |
| MsG0180004792.01 | MsG0480022113.01 | 0.829537 | 4.869573e-55 | 4.998143e-52 |
| MsG0180005822.01 | MsG0480022113.01 | 0.846225 | 2.483212e-59 | 4.244360e-56 |
| MsG0180006028.01 | MsG0480022113.01 | 0.895669 | 7.696150e-76 | 8.062462e-72 |
| MsG0180006217.01 | MsG0480022113.01 | 0.863646 | 2.146330e-64 | 6.554223e-61 |
| MsG0280010728.01 | MsG0480022113.01 | 0.816732 | 4.752112e-52 | 3.394414e-49 |
| MsG0280011218.01 | MsG0480022113.01 | 0.812559 | 3.989876e-51 | 2.544928e-48 |
| MsG0280011271.01 | MsG0480022113.01 | -0.809728 | 1.638968e-50 | 9.697794e-48 |
| MsG0380011693.01 | MsG0480022113.01 | 0.835274 | 1.845647e-56 | 2.246113e-53 |
| MsG0380012658.01 | MsG0480022113.01 | -0.804316 | 2.290653e-49 | 1.177341e-46 |
| MsG0380012868.01 | MsG0480022113.01 | 0.822906 | 1.843297e-53 | 1.563532e-50 |
| MsG0480018644.01 | MsG0480022113.01 | 0.804495 | 2.101964e-49 | 1.085333e-46 |
| MsG0480019812.01 | MsG0480022113.01 | 0.893926 | 3.985245e-75 | 3.877877e-71 |
| MsG0480020596.01 | MsG0480022113.01 | 0.852796 | 3.647716e-61 | 7.712867e-58 |
| MsG0480021038.01 | MsG0480022113.01 | 0.877029 | 8.716170e-69 | 4.317802e-65 |
| MsG0480021213.01 | MsG0480022113.01 | 0.910259 | 2.287563e-82 | 4.630760e-78 |
| MsG0480022113.01 | MsG0480022162.01 | 0.807035 | 6.152052e-50 | 3.390923e-47 |
| MsG0480022113.01 | MsG0480023466.01 | 0.805349 | 1.393484e-49 | 7.355412e-47 |
| MsG0480022113.01 | MsG0480024011.01 | 0.842641 | 2.284833e-58 | 3.485962e-55 |
| MsG0480022113.01 | MsG0580027183.01 | 0.832920 | 7.176365e-56 | 8.137009e-53 |
| MsG0480022113.01 | MsG0580027189.01 | 0.850699 | 1.434519e-60 | 2.833953e-57 |
| MsG0480022113.01 | MsG0580029325.01 | 0.858103 | 1.036263e-62 | 2.615187e-59 |
| MsG0480022113.01 | MsG0580029751.01 | 0.814726 | 1.330086e-51 | 8.994510e-49 |
| MsG0480022113.01 | MsG0680031826.01 | 0.826123 | 3.223878e-54 | 2.996388e-51 |
| MsG0480022113.01 | MsG0680032431.01 | 0.806189 | 9.282878e-50 | 5.006796e-47 |
| MsG0480022113.01 | MsG0680032850.01 | 0.896152 | 4.852317e-76 | 5.185636e-72 |
| MsG0480022113.01 | MsG0680035344.01 | -0.801762 | 7.724880e-49 | 3.719357e-46 |
| MsG0480022113.01 | MsG0780036008.01 | 0.815538 | 8.783846e-52 | 6.072726e-49 |
| MsG0480022113.01 | MsG0780040214.01 | 0.830894 | 2.271110e-55 | 2.425216e-52 |
| MsG0480022113.01 | MsG0780040236.01 | 0.843901 | 1.053538e-58 | 1.672705e-55 |
| MsG0480022113.01 | MsG0780040550.01 | 0.802103 | 6.575165e-49 | 3.193398e-46 |
| MsG0480022113.01 | MsG0780040684.01 | 0.832752 | 7.900634e-56 | 8.913645e-53 |
| MsG0480022113.01 | MsG0780040965.01 | 0.833134 | 6.348605e-56 | 7.245756e-53 |
| MsG0480022113.01 | MsG0780041331.01 | 0.859010 | 5.558497e-63 | 1.446521e-59 |
| MsG0480022113.01 | MsG0780041361.01 | 0.902246 | 1.178894e-78 | 1.654237e-74 |
| MsG0480022113.01 | MsG0780041442.01 | 0.808282 | 3.343491e-50 | 1.903973e-47 |
| MsG0480022113.01 | MsG0880041847.01 | 0.858996 | 5.611893e-63 | 1.459774e-59 |
| MsG0480022113.01 | MsG0880042019.01 | 0.824636 | 7.248279e-54 | 6.457876e-51 |
| MsG0480022113.01 | MsG0880042278.01 | 0.804483 | 2.114304e-49 | 1.091369e-46 |
| MsG0480022113.01 | MsG0880042415.01 | 0.805394 | 1.363502e-49 | 7.205390e-47 |
| MsG0480022113.01 | MsG0880043092.01 | 0.836113 | 1.131580e-56 | 1.412226e-53 |
| MsG0480022113.01 | MsG0880043476.01 | 0.850840 | 1.309333e-60 | 2.598900e-57 |
| MsG0480022113.01 | MsG0880045327.01 | 0.802710 | 4.931194e-49 | 2.432369e-46 |
| MsG0480022113.01 | MsG0880047435.01 | 0.808297 | 3.319149e-50 | 1.890835e-47 |
| MsG0380015456.01 | MsG0480022113.01 | 0.819313 | 1.239909e-52 | 9.507625e-50 |
| MsG0380017162.01 | MsG0480022113.01 | 0.837769 | 4.275625e-57 | 5.611582e-54 |
| MsG0380017427.01 | MsG0480022113.01 | 0.911201 | 7.952852e-83 | 1.685129e-78 |
| MsG0380017436.01 | MsG0480022113.01 | 0.814455 | 1.527522e-51 | 1.025429e-48 |
| MsG0480018337.01 | MsG0480022113.01 | 0.846420 | 2.196951e-59 | 3.779401e-56 |
| MsG0480018338.01 | MsG0480022113.01 | 0.842596 | 2.348408e-58 | 3.578292e-55 |
| MsG0280006505.01 | MsG0480022113.01 | -0.819166 | 1.339359e-52 | 1.022890e-49 |
| MsG0280007406.01 | MsG0480022113.01 | 0.869321 | 3.379485e-66 | 1.262969e-62 |
| MsG0280007852.01 | MsG0480022113.01 | 0.802866 | 4.577940e-49 | 2.267100e-46 |
| MsG0280007853.01 | MsG0480022113.01 | 0.806747 | 7.078793e-50 | 3.872698e-47 |
| MsG0280008223.01 | MsG0480022113.01 | 0.803137 | 4.024041e-49 | 2.006570e-46 |
| MsG0280009675.01 | MsG0480022113.01 | 0.836572 | 8.649442e-57 | 1.094336e-53 |
| MsG0280010246.01 | MsG0480022113.01 | 0.818735 | 1.678472e-52 | 1.266710e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022113.01.T01 | MTR_4g082330 | 91.250 | 160 | 13 | 1 | 1 | 159 | 1 | 160 | 3.71e-83 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTGAGGGTGGCTTCTA+AGG | 0.266560 | 4:-68380441 | MsG0480022113.01.T01:CDS |
| ACCGCGTTGCAGCCCGCGTC+GGG | 0.276137 | 4:+68380525 | None:intergenic |
| GGCTGCAACGCGGTTGGATT+GGG | 0.277741 | 4:-68380516 | MsG0480022113.01.T01:CDS |
| AAACAACAATATTGAAGTTC+AGG | 0.324417 | 4:-68380660 | MsG0480022113.01.T01:CDS |
| GGGCTGCAACGCGGTTGGAT+TGG | 0.330424 | 4:-68380517 | MsG0480022113.01.T01:CDS |
| AAAGAAGAAATAATAATTTC+CGG | 0.352221 | 4:+68380251 | None:intergenic |
| TGGTCAATTACGTGCGTGGC+TGG | 0.395524 | 4:-68380386 | MsG0480022113.01.T01:CDS |
| ATTCCGAACCGTCCACCTTC+CGG | 0.399012 | 4:+68380312 | None:intergenic |
| CGTAACTATGCAATGTGTGC+GGG | 0.429868 | 4:-68380416 | MsG0480022113.01.T01:CDS |
| ACGGTTCGGAATATCTTCTT+AGG | 0.438601 | 4:-68380301 | MsG0480022113.01.T01:CDS |
| AGGAAATTCCTTCTTCATGA+TGG | 0.453632 | 4:+68380594 | None:intergenic |
| TCGCCGGAAGGTGGACGGTT+CGG | 0.463920 | 4:-68380315 | MsG0480022113.01.T01:CDS |
| AACCGCGTTGCAGCCCGCGT+CGG | 0.468668 | 4:+68380524 | None:intergenic |
| TGAAATGAATAAGACGTTGA+AGG | 0.469901 | 4:-68380489 | MsG0480022113.01.T01:CDS |
| TGTAGCTGTGACGGCGGTGT+TGG | 0.471963 | 4:-68380360 | MsG0480022113.01.T01:CDS |
| CGGCGGTGTTGGTTTACGTC+GGG | 0.474783 | 4:-68380349 | MsG0480022113.01.T01:CDS |
| GACGCGGGCTGCAACGCGGT+TGG | 0.485105 | 4:-68380522 | MsG0480022113.01.T01:CDS |
| TGGTTTACGTCGGGATTCAA+AGG | 0.489575 | 4:-68380340 | MsG0480022113.01.T01:CDS |
| GAAGAAGAAGAACAAGAAAG+AGG | 0.493181 | 4:+68380626 | None:intergenic |
| AACGGAACTTGACGCCGTCA+TGG | 0.509958 | 4:+68380568 | None:intergenic |
| TGAGGTGAGTATATGGCATC+CGG | 0.515752 | 4:-68380270 | MsG0480022113.01.T01:CDS |
| TTCACCTTCCTCGCCACCAA+CGG | 0.518986 | 4:+68380550 | None:intergenic |
| CACACCACTCTCGAATCCTC+TGG | 0.521436 | 4:-68380707 | MsG0480022113.01.T01:CDS |
| TCGGGATTCAAAGGCGTCGC+CGG | 0.522229 | 4:-68380331 | MsG0480022113.01.T01:CDS |
| ACGGCGTCAAGTTCCGTTGG+TGG | 0.523122 | 4:-68380563 | MsG0480022113.01.T01:CDS |
| AACAACAATATTGAAGTTCA+GGG | 0.523883 | 4:-68380659 | MsG0480022113.01.T01:CDS |
| ACGGAACTTGACGCCGTCAT+GGG | 0.524511 | 4:+68380569 | None:intergenic |
| AGTTCCGTTGGTGGCGAGGA+AGG | 0.531811 | 4:-68380554 | MsG0480022113.01.T01:CDS |
| GTCAAGTTCCGTTGGTGGCG+AGG | 0.531974 | 4:-68380558 | MsG0480022113.01.T01:CDS |
| CCGCGTTGCAGCCCGCGTCG+GGG | 0.537525 | 4:+68380526 | None:intergenic |
| ACTTGACGCCGTCATGGGCG+AGG | 0.539198 | 4:+68380574 | None:intergenic |
| TCAAAGGCGTCGCCGGAAGG+TGG | 0.547716 | 4:-68380324 | MsG0480022113.01.T01:CDS |
| CCCCGACGCGGGCTGCAACG+CGG | 0.549132 | 4:-68380526 | MsG0480022113.01.T01:CDS |
| GGAAATTCCTTCTTCATGAT+GGG | 0.551150 | 4:+68380595 | None:intergenic |
| TTCTTCATGATGGGTAGGAG+TGG | 0.563504 | 4:+68380604 | None:intergenic |
| GGAAGGTGAAGCCCCGACGC+GGG | 0.567663 | 4:-68380537 | MsG0480022113.01.T01:CDS |
| GGCTGGAGCTGTAGCTGTGA+CGG | 0.568693 | 4:-68380369 | MsG0480022113.01.T01:CDS |
| ACTCCTACCCATCATGAAGA+AGG | 0.569002 | 4:-68380602 | MsG0480022113.01.T01:CDS |
| ATTCCTTCTTCATGATGGGT+AGG | 0.572462 | 4:+68380599 | None:intergenic |
| ATGACGGCGTCAAGTTCCGT+TGG | 0.572657 | 4:-68380566 | MsG0480022113.01.T01:CDS |
| TAAGACGTTGAAGGTGCGGA+TGG | 0.572695 | 4:-68380480 | MsG0480022113.01.T01:CDS |
| GATTCAAAGGCGTCGCCGGA+AGG | 0.574232 | 4:-68380327 | MsG0480022113.01.T01:CDS |
| AGGAATTTCCTCGCCCATGA+CGG | 0.575563 | 4:-68380582 | MsG0480022113.01.T01:CDS |
| ACGGCGGTGTTGGTTTACGT+CGG | 0.576717 | 4:-68380350 | MsG0480022113.01.T01:CDS |
| AGGCGTCGCCGGAAGGTGGA+CGG | 0.577749 | 4:-68380320 | MsG0480022113.01.T01:CDS |
| GTAACTATGCAATGTGTGCG+GGG | 0.581011 | 4:-68380415 | MsG0480022113.01.T01:CDS |
| GACGTTGAAGGTGCGGATGG+AGG | 0.584100 | 4:-68380477 | MsG0480022113.01.T01:CDS |
| CCACTCTCGAATCCTCTGGA+TGG | 0.589063 | 4:-68380703 | MsG0480022113.01.T01:CDS |
| GATTATTCTGTTCCATCCAG+AGG | 0.593351 | 4:+68380691 | None:intergenic |
| TGAATAAGACGTTGAAGGTG+CGG | 0.597673 | 4:-68380484 | MsG0480022113.01.T01:CDS |
| GCGGATGGAGGCTATGAGAG+TGG | 0.619387 | 4:-68380465 | MsG0480022113.01.T01:CDS |
| ACAATATTGAAGTTCAGGGA+GGG | 0.623670 | 4:-68380655 | MsG0480022113.01.T01:CDS |
| TCGTAACTATGCAATGTGTG+CGG | 0.627278 | 4:-68380417 | MsG0480022113.01.T01:CDS |
| CCATCCAGAGGATTCGAGAG+TGG | 0.631254 | 4:+68380703 | None:intergenic |
| TGGAGCTGTAGCTGTGACGG+CGG | 0.631922 | 4:-68380366 | MsG0480022113.01.T01:CDS |
| AACAATATTGAAGTTCAGGG+AGG | 0.646038 | 4:-68380656 | MsG0480022113.01.T01:CDS |
| TAACTATGCAATGTGTGCGG+GGG | 0.646393 | 4:-68380414 | MsG0480022113.01.T01:CDS |
| AGGAAGGTGAAGCCCCGACG+CGG | 0.653291 | 4:-68380538 | MsG0480022113.01.T01:CDS |
| CTATGAGAGTGGAAATTGTG+AGG | 0.658550 | 4:-68380454 | MsG0480022113.01.T01:CDS |
| GAGAGTGGAAATTGTGAGGG+TGG | 0.678186 | 4:-68380450 | MsG0480022113.01.T01:CDS |
| TATGAGAGTGGAAATTGTGA+GGG | 0.682385 | 4:-68380453 | MsG0480022113.01.T01:CDS |
| GCATGGAGGAAATAAACGAG+TGG | 0.717528 | 4:-68380745 | MsG0480022113.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAGAAATAATAATTTC+CGG | + | Chr4:68380736-68380755 | None:intergenic | 15.0% |
| ! | AAACAACAATATTGAAGTTC+AGG | - | Chr4:68380324-68380343 | MsG0480022113.01.T01:CDS | 25.0% |
| ! | AACAACAATATTGAAGTTCA+GGG | - | Chr4:68380325-68380344 | MsG0480022113.01.T01:CDS | 25.0% |
| AAAAAGATGAGGTGAGTATA+TGG | - | Chr4:68380707-68380726 | MsG0480022113.01.T01:CDS | 30.0% | |
| TGAAATGAATAAGACGTTGA+AGG | - | Chr4:68380495-68380514 | MsG0480022113.01.T01:CDS | 30.0% | |
| AACAATATTGAAGTTCAGGG+AGG | - | Chr4:68380328-68380347 | MsG0480022113.01.T01:CDS | 35.0% | |
| ACAATATTGAAGTTCAGGGA+GGG | - | Chr4:68380329-68380348 | MsG0480022113.01.T01:CDS | 35.0% | |
| AGGAAATTCCTTCTTCATGA+TGG | + | Chr4:68380393-68380412 | None:intergenic | 35.0% | |
| GAAGAAGAAGAACAAGAAAG+AGG | + | Chr4:68380361-68380380 | None:intergenic | 35.0% | |
| GGAAATTCCTTCTTCATGAT+GGG | + | Chr4:68380392-68380411 | None:intergenic | 35.0% | |
| TATGAGAGTGGAAATTGTGA+GGG | - | Chr4:68380531-68380550 | MsG0480022113.01.T01:CDS | 35.0% | |
| TCTTCTTAGGCAAAAAGATG+AGG | - | Chr4:68380696-68380715 | MsG0480022113.01.T01:CDS | 35.0% | |
| CTATGAGAGTGGAAATTGTG+AGG | - | Chr4:68380530-68380549 | MsG0480022113.01.T01:CDS | 40.0% | |
| GATTATTCTGTTCCATCCAG+AGG | + | Chr4:68380296-68380315 | None:intergenic | 40.0% | |
| TCGTAACTATGCAATGTGTG+CGG | - | Chr4:68380567-68380586 | MsG0480022113.01.T01:CDS | 40.0% | |
| TGAATAAGACGTTGAAGGTG+CGG | - | Chr4:68380500-68380519 | MsG0480022113.01.T01:CDS | 40.0% | |
| ! | ACGGTTCGGAATATCTTCTT+AGG | - | Chr4:68380683-68380702 | MsG0480022113.01.T01:CDS | 40.0% |
| !! | ATTCCTTCTTCATGATGGGT+AGG | + | Chr4:68380388-68380407 | None:intergenic | 40.0% |
| AATTGTGAGGGTGGCTTCTA+AGG | - | Chr4:68380543-68380562 | MsG0480022113.01.T01:CDS | 45.0% | |
| ACTCCTACCCATCATGAAGA+AGG | - | Chr4:68380382-68380401 | MsG0480022113.01.T01:CDS | 45.0% | |
| CGTAACTATGCAATGTGTGC+GGG | - | Chr4:68380568-68380587 | MsG0480022113.01.T01:CDS | 45.0% | |
| GTAACTATGCAATGTGTGCG+GGG | - | Chr4:68380569-68380588 | MsG0480022113.01.T01:CDS | 45.0% | |
| TAACTATGCAATGTGTGCGG+GGG | - | Chr4:68380570-68380589 | MsG0480022113.01.T01:CDS | 45.0% | |
| TGAGGTGAGTATATGGCATC+CGG | - | Chr4:68380714-68380733 | MsG0480022113.01.T01:CDS | 45.0% | |
| TGGTTTACGTCGGGATTCAA+AGG | - | Chr4:68380644-68380663 | MsG0480022113.01.T01:CDS | 45.0% | |
| !! | GTTTTGGTCAATTACGTGCG+TGG | - | Chr4:68380594-68380613 | MsG0480022113.01.T01:CDS | 45.0% |
| !! | TTCTTCATGATGGGTAGGAG+TGG | + | Chr4:68380383-68380402 | None:intergenic | 45.0% |
| AGGAATTTCCTCGCCCATGA+CGG | - | Chr4:68380402-68380421 | MsG0480022113.01.T01:CDS | 50.0% | |
| GAGAGTGGAAATTGTGAGGG+TGG | - | Chr4:68380534-68380553 | MsG0480022113.01.T01:CDS | 50.0% | |
| ! | TAAGACGTTGAAGGTGCGGA+TGG | - | Chr4:68380504-68380523 | MsG0480022113.01.T01:CDS | 50.0% |
| AACGGAACTTGACGCCGTCA+TGG | + | Chr4:68380419-68380438 | None:intergenic | 55.0% | |
| ACGGAACTTGACGCCGTCAT+GGG | + | Chr4:68380418-68380437 | None:intergenic | 55.0% | |
| ATGACGGCGTCAAGTTCCGT+TGG | - | Chr4:68380418-68380437 | MsG0480022113.01.T01:CDS | 55.0% | |
| ATTCCGAACCGTCCACCTTC+CGG | + | Chr4:68380675-68380694 | None:intergenic | 55.0% | |
| CACACCACTCTCGAATCCTC+TGG | - | Chr4:68380277-68380296 | MsG0480022113.01.T01:CDS | 55.0% | |
| CCACTCTCGAATCCTCTGGA+TGG | - | Chr4:68380281-68380300 | MsG0480022113.01.T01:CDS | 55.0% | |
| CCATCCAGAGGATTCGAGAG+TGG | + | Chr4:68380284-68380303 | None:intergenic | 55.0% | |
| TGGTCAATTACGTGCGTGGC+TGG | - | Chr4:68380598-68380617 | MsG0480022113.01.T01:CDS | 55.0% | |
| TTCACCTTCCTCGCCACCAA+CGG | + | Chr4:68380437-68380456 | None:intergenic | 55.0% | |
| !! | ACGGCGGTGTTGGTTTACGT+CGG | - | Chr4:68380634-68380653 | MsG0480022113.01.T01:CDS | 55.0% |
| ACGGCGTCAAGTTCCGTTGG+TGG | - | Chr4:68380421-68380440 | MsG0480022113.01.T01:CDS | 60.0% | |
| GCGGATGGAGGCTATGAGAG+TGG | - | Chr4:68380519-68380538 | MsG0480022113.01.T01:CDS | 60.0% | |
| GGCTGCAACGCGGTTGGATT+GGG | - | Chr4:68380468-68380487 | MsG0480022113.01.T01:CDS | 60.0% | |
| GGCTGGAGCTGTAGCTGTGA+CGG | - | Chr4:68380615-68380634 | MsG0480022113.01.T01:CDS | 60.0% | |
| TGGAGCTGTAGCTGTGACGG+CGG | - | Chr4:68380618-68380637 | MsG0480022113.01.T01:CDS | 60.0% | |
| TGTAGCTGTGACGGCGGTGT+TGG | - | Chr4:68380624-68380643 | MsG0480022113.01.T01:CDS | 60.0% | |
| ! | GACGTTGAAGGTGCGGATGG+AGG | - | Chr4:68380507-68380526 | MsG0480022113.01.T01:CDS | 60.0% |
| !! | AGTTCCGTTGGTGGCGAGGA+AGG | - | Chr4:68380430-68380449 | MsG0480022113.01.T01:CDS | 60.0% |
| !! | CGGCGGTGTTGGTTTACGTC+GGG | - | Chr4:68380635-68380654 | MsG0480022113.01.T01:CDS | 60.0% |
| !! | GATTCAAAGGCGTCGCCGGA+AGG | - | Chr4:68380657-68380676 | MsG0480022113.01.T01:CDS | 60.0% |
| !! | GTCAAGTTCCGTTGGTGGCG+AGG | - | Chr4:68380426-68380445 | MsG0480022113.01.T01:CDS | 60.0% |
| !! | TCGGGATTCAAAGGCGTCGC+CGG | - | Chr4:68380653-68380672 | MsG0480022113.01.T01:CDS | 60.0% |
| !!! | CAATGTGTGCGGGGGCGTTT+TGG | - | Chr4:68380578-68380597 | MsG0480022113.01.T01:CDS | 60.0% |
| ACTTGACGCCGTCATGGGCG+AGG | + | Chr4:68380413-68380432 | None:intergenic | 65.0% | |
| AGGAAGGTGAAGCCCCGACG+CGG | - | Chr4:68380446-68380465 | MsG0480022113.01.T01:CDS | 65.0% | |
| GGGCTGCAACGCGGTTGGAT+TGG | - | Chr4:68380467-68380486 | MsG0480022113.01.T01:CDS | 65.0% | |
| TCGCCGGAAGGTGGACGGTT+CGG | - | Chr4:68380669-68380688 | MsG0480022113.01.T01:CDS | 65.0% | |
| !! | TCAAAGGCGTCGCCGGAAGG+TGG | - | Chr4:68380660-68380679 | MsG0480022113.01.T01:CDS | 65.0% |
| AACCGCGTTGCAGCCCGCGT+CGG | + | Chr4:68380463-68380482 | None:intergenic | 70.0% | |
| GGAAGGTGAAGCCCCGACGC+GGG | - | Chr4:68380447-68380466 | MsG0480022113.01.T01:CDS | 70.0% | |
| ! | AGGCGTCGCCGGAAGGTGGA+CGG | - | Chr4:68380664-68380683 | MsG0480022113.01.T01:CDS | 70.0% |
| ACCGCGTTGCAGCCCGCGTC+GGG | + | Chr4:68380462-68380481 | None:intergenic | 75.0% | |
| ! | GACGCGGGCTGCAACGCGGT+TGG | - | Chr4:68380462-68380481 | MsG0480022113.01.T01:CDS | 75.0% |
| ! | CCGCGTTGCAGCCCGCGTCG+GGG | + | Chr4:68380461-68380480 | None:intergenic | 80.0% |
| !! | CCCCGACGCGGGCTGCAACG+CGG | - | Chr4:68380458-68380477 | MsG0480022113.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 68380241 | 68380765 | 68380241 | ID=MsG0480022113.01;Name=MsG0480022113.01 |
| Chr4 | mRNA | 68380241 | 68380765 | 68380241 | ID=MsG0480022113.01.T01;Parent=MsG0480022113.01;Name=MsG0480022113.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|174 |
| Chr4 | exon | 68380241 | 68380765 | 68380241 | ID=MsG0480022113.01.T01:exon:31115;Parent=MsG0480022113.01.T01 |
| Chr4 | CDS | 68380241 | 68380765 | 68380241 | ID=MsG0480022113.01.T01:cds;Parent=MsG0480022113.01.T01 |
| Gene Sequence |
| Protein sequence |
