AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001864.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001864.01.T01 MTR_1g045520 83.624 287 24 2 31 315 23 288 1.05e-149 423
MsG0180001864.01.T01 MTR_4g088590 73.148 108 5 1 154 261 49 132 1.41e-33 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001864.01.T01 AT3G04310 33.529 170 96 4 154 315 100 260 9.20e-18 82.4
MsG0180001864.01.T01 AT3G04310 33.529 170 96 4 154 315 100 260 9.20e-18 82.4
MsG0180001864.01.T01 AT2G33250 33.987 153 68 3 119 268 123 245 8.60e-12 65.5

Find 93 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGGCAATTGAGAAATTA+TGG 0.159956 1:+28384871 MsG0180001864.01.T01:CDS
AGAAGGAAATAGTGGAATTT+TGG 0.185084 1:+28381411 MsG0180001864.01.T01:CDS
ATTCTTCTTGAGGTTTGTTC+TGG 0.281939 1:-28381311 None:intergenic
GATGAGGAAGATGATGAATA+TGG 0.295573 1:+28381339 MsG0180001864.01.T01:CDS
TGTTTGTGTCAGTACTTCTT+AGG 0.300446 1:+28384576 MsG0180001864.01.T01:CDS
CTTTGTCCATGTGCCCAAAA+TGG 0.303946 1:-28385239 None:intergenic
AGCCGAGATGCACCAAGTTT+TGG 0.334550 1:+28385062 MsG0180001864.01.T01:CDS
GCTTGTGATCTCCTTGTTGT+TGG 0.370031 1:-28385113 None:intergenic
CCAACGTGGGAAGTTGTTAG+AGG 0.384834 1:-28381239 None:intergenic
ATGAGAGTGTATGCGATAGA+TGG 0.404246 1:+28381079 MsG0180001864.01.T01:CDS
TGCCAAGGCACCACATTCCT+TGG 0.405299 1:+28381125 MsG0180001864.01.T01:CDS
TTCATCCTATACTTGCGCTT+TGG 0.407380 1:-28384912 None:intergenic
ACTGAAGAAGAAGGAAATAG+TGG 0.413376 1:+28381403 MsG0180001864.01.T01:CDS
AATGCCATGAGGAAAGCTTT+TGG 0.417045 1:-28384819 None:intergenic
AAGATGCTTTAGATAGTTTG+TGG 0.431159 1:+28381434 MsG0180001864.01.T01:CDS
AGGGTCACAAAGGATGAATA+TGG 0.435338 1:+28385142 MsG0180001864.01.T01:CDS
CTTGCGCTTTGGTTTGCTCT+CGG 0.443826 1:-28384901 None:intergenic
AGATACGCGAGAATGAGAAA+TGG 0.443993 1:-28381212 None:intergenic
ACTGGCAATTGAGAAATTAT+GGG 0.445083 1:+28384872 MsG0180001864.01.T01:CDS
TGAGGAGAATAAAGAGGTTG+AGG 0.448602 1:-28381163 None:intergenic
CTCGTGTGTCATTCACATTT+CGG 0.452063 1:-28384944 None:intergenic
TCATCTTCATATTCTTCTTG+AGG 0.459005 1:-28381321 None:intergenic
CAACCATGATGCAAGGATGA+TGG 0.466104 1:-28384784 None:intergenic
AAAACTAATACGAGGAAGGC+GGG 0.468188 1:+28384993 MsG0180001864.01.T01:CDS
GATACGCGAGAATGAGAAAT+GGG 0.469187 1:-28381211 None:intergenic
GCAAACCAAAGCGCAAGTAT+AGG 0.470582 1:+28384907 MsG0180001864.01.T01:CDS
TGGAAAGTGGTAGGTTGAGT+AGG 0.473865 1:+28385162 MsG0180001864.01.T01:CDS
TTGTTGAAGTTGAAGTTTGA+AGG 0.475376 1:-28381286 None:intergenic
GCATCATGGTTGCTTTCTAC+CGG 0.476024 1:+28384795 MsG0180001864.01.T01:CDS
GAGGAGAATAAAGAGGTTGA+GGG 0.477423 1:-28381162 None:intergenic
GGAAGGCGGGGATGCAGTCG+TGG 0.477673 1:+28385006 MsG0180001864.01.T01:CDS
GGGATGACTTGGAGCGAGCT+CGG 0.485131 1:+28385090 MsG0180001864.01.T01:CDS
TCATCCCATCCACCAAAACT+TGG 0.498543 1:-28385074 None:intergenic
AACCAAGGAATGTGGTGCCT+TGG 0.501554 1:-28381127 None:intergenic
AGAGGTTGAGGGGTCGAGAG+AGG 0.501938 1:-28381151 None:intergenic
CACCAAAACTTGGTGCATCT+CGG 0.507741 1:-28385064 None:intergenic
AGATAGTTTGTGGATTCTCA+AGG 0.515626 1:+28381444 MsG0180001864.01.T01:CDS
CAGTCAGTCAGCACTTGCAC+TGG 0.515720 1:+28384854 MsG0180001864.01.T01:CDS
CTCTTTATTCTCCTCATCCA+TGG 0.517131 1:+28381170 MsG0180001864.01.T01:CDS
GAAAAGGGTCGCCATGGATG+AGG 0.517568 1:-28381181 None:intergenic
AGGTCGAAAAGTGTCATCAT+TGG 0.521282 1:-28381266 None:intergenic
ATGAGGAAGATGATGAATAT+GGG 0.525852 1:+28381340 MsG0180001864.01.T01:CDS
AAAATGTGATACGCCCCTCT+TGG 0.528817 1:+28385193 MsG0180001864.01.T01:CDS
GCTGTAAAAGTCTCCTCCAT+AGG 0.531126 1:+28385264 MsG0180001864.01.T01:CDS
ATCAAAGCTCAAGTTCCCTA+TGG 0.534478 1:-28385280 None:intergenic
CTGTAAAAGTCTCCTCCATA+GGG 0.535434 1:+28385265 MsG0180001864.01.T01:CDS
AACAACGGTTCGGTTGATAG+TGG 0.539590 1:+28385038 MsG0180001864.01.T01:CDS
GGAGATCACAAGCAAGGAAA+GGG 0.542632 1:+28385123 MsG0180001864.01.T01:CDS
AACCATGATGCAAGGATGAT+GGG 0.544823 1:-28384783 None:intergenic
ATGTGGTGCCTTGGCAGTAG+TGG 0.548978 1:-28381118 None:intergenic
CACACGAGTTGATGAAGAGC+CGG 0.549575 1:+28384959 MsG0180001864.01.T01:CDS
AGGAGATCACAAGCAAGGAA+AGG 0.559152 1:+28385122 MsG0180001864.01.T01:CDS
CAAAGGATGAATATGGAAAG+TGG 0.560093 1:+28385149 MsG0180001864.01.T01:CDS
ACAGAAGAAACTGAAGAAGA+AGG 0.561811 1:+28381394 MsG0180001864.01.T01:CDS
GATAAGCAATCGAACCAAGA+GGG 0.563674 1:-28385207 None:intergenic
TGCCCATCATCCTTGCATCA+TGG 0.572196 1:+28384781 MsG0180001864.01.T01:CDS
TCAAGAAGAATATGAAGATG+AGG 0.577751 1:+28381323 MsG0180001864.01.T01:CDS
CCTCTAACAACTTCCCACGT+TGG 0.579914 1:+28381239 MsG0180001864.01.T01:CDS
GGTAGTTGAGAACAACGGTT+CGG 0.582840 1:+28385028 MsG0180001864.01.T01:CDS
AGCGCAAGTATAGGATGAAG+AGG 0.587300 1:+28384916 MsG0180001864.01.T01:CDS
GAAGGCGGGGATGCAGTCGT+GGG 0.589601 1:+28385007 MsG0180001864.01.T01:CDS
CGGTGTTAGTGTCAGTGTTG+TGG 0.594391 1:+28384542 MsG0180001864.01.T01:intron
GGATGAATATGGAAAGTGGT+AGG 0.598330 1:+28385153 MsG0180001864.01.T01:CDS
TTTGTGGAAAAGGGTCGCCA+TGG 0.601359 1:-28381187 None:intergenic
TGAATATGGGAAAGAAGAGA+AGG 0.608164 1:+28381353 MsG0180001864.01.T01:CDS
CAACAAGGAGATCACAAGCA+AGG 0.612370 1:+28385117 MsG0180001864.01.T01:CDS
CGGCCCAAAAGCTTTCCTCA+TGG 0.614363 1:+28384815 MsG0180001864.01.T01:CDS
CAATTGAGAAATTATGGGGA+CGG 0.615205 1:+28384877 MsG0180001864.01.T01:CDS
AGGAGAATAAAGAGGTTGAG+GGG 0.616337 1:-28381161 None:intergenic
CATGGATGAGGAGAATAAAG+AGG 0.616844 1:-28381169 None:intergenic
CATCAACACCACTACTGCCA+AGG 0.619463 1:+28381110 MsG0180001864.01.T01:CDS
AGCGAGCTCGGCCAACAACA+AGG 0.619530 1:+28385102 MsG0180001864.01.T01:CDS
TAGAAAGCAACCATGATGCA+AGG 0.624556 1:-28384791 None:intergenic
CCAGAAAACTAATACGAGGA+AGG 0.626614 1:+28384989 MsG0180001864.01.T01:CDS
GAAAACTAATACGAGGAAGG+CGG 0.630480 1:+28384992 MsG0180001864.01.T01:CDS
TGGGAAAGAAGAGAAGGTGG+TGG 0.632254 1:+28381359 MsG0180001864.01.T01:CDS
AAACTAATACGAGGAAGGCG+GGG 0.635407 1:+28384994 MsG0180001864.01.T01:CDS
AAAGCTCAAGTTCCCTATGG+AGG 0.641736 1:-28385277 None:intergenic
AAGCAAGGAAAGGGTCACAA+AGG 0.643486 1:+28385132 MsG0180001864.01.T01:CDS
ATATGGGAAAGAAGAGAAGG+TGG 0.646383 1:+28381356 MsG0180001864.01.T01:CDS
CTGGCAATTGAGAAATTATG+GGG 0.651354 1:+28384873 MsG0180001864.01.T01:CDS
ATAAGCAATCGAACCAAGAG+GGG 0.653999 1:-28385206 None:intergenic
AGAGAGGTAACCAAGGAATG+TGG 0.655164 1:-28381135 None:intergenic
GCAAGTGCTGACTGACTGAG+AGG 0.659866 1:-28384849 None:intergenic
CGATAAGCAATCGAACCAAG+AGG 0.678345 1:-28385208 None:intergenic
CAAGTGCTGACTGACTGAGA+GGG 0.679661 1:-28384848 None:intergenic
AGAAGTACTGACACAAACAT+CGG 0.693332 1:-28384572 None:intergenic
CATCATTGGAATTCCAACGT+GGG 0.700259 1:-28381252 None:intergenic
GAGGGATTGCTAATGCCATG+AGG 0.724452 1:-28384830 None:intergenic
TCATCATTGGAATTCCAACG+TGG 0.727073 1:-28381253 None:intergenic
TCGTGGGTAGTTGAGAACAA+CGG 0.734928 1:+28385023 MsG0180001864.01.T01:CDS
GGGGTCGAGAGAGGTAACCA+AGG 0.743263 1:-28381142 None:intergenic
AAAACCAGAAAACTAATACG+AGG 0.759823 1:+28384985 MsG0180001864.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTTCTAATATATTAT+TGG + Chr1:28384510-28384529 MsG0180001864.01.T01:intron 10.0%
!! TGAGGATAAAAAAAAAAAAA+AGG - Chr1:28384248-28384267 None:intergenic 15.0%
!!! CATTTTATTTATGTATTAAG+CGG + Chr1:28384675-28384694 MsG0180001864.01.T01:intron 15.0%
!!! TGTTTGTTAAGATTTATATA+AGG + Chr1:28382880-28382899 MsG0180001864.01.T01:intron 15.0%
!!! TTAATAAGAGAGTATAATAA+AGG - Chr1:28384275-28384294 None:intergenic 15.0%
!!! TTAGTATATATGGTAAATTT+TGG + Chr1:28383578-28383597 MsG0180001864.01.T01:intron 15.0%
!! AAATATTACATGAATAGATG+TGG - Chr1:28383254-28383273 None:intergenic 20.0%
!! AATATTACATGAATAGATGT+GGG - Chr1:28383253-28383272 None:intergenic 20.0%
!! ACTTATAACAATAAGCTATT+TGG + Chr1:28382283-28382302 MsG0180001864.01.T01:intron 20.0%
!! ATAAATCTTAACAAACACTA+TGG - Chr1:28382877-28382896 None:intergenic 20.0%
!! ATCTTCCACATAAAAATAAA+TGG - Chr1:28381517-28381536 None:intergenic 20.0%
!! CATATAAAATTTGCATTGAA+TGG + Chr1:28382768-28382787 MsG0180001864.01.T01:intron 20.0%
!! GAATACTAATTCTTTCAATT+TGG + Chr1:28382665-28382684 MsG0180001864.01.T01:intron 20.0%
!! GTATACTCAAACATAAAAAA+AGG - Chr1:28382030-28382049 None:intergenic 20.0%
!! GTATTATGAAAAGAGAAAAA+TGG + Chr1:28383851-28383870 MsG0180001864.01.T01:intron 20.0%
!! TACTCTCTTATTAAAGTATA+AGG + Chr1:28384281-28384300 MsG0180001864.01.T01:intron 20.0%
!! TGAAAGAATTAGTATTCAAA+GGG - Chr1:28382662-28382681 None:intergenic 20.0%
!! TTGAAAGAATTAGTATTCAA+AGG - Chr1:28382663-28382682 None:intergenic 20.0%
!!! CAATGATTATTAGTTTGATA+TGG - Chr1:28384100-28384119 None:intergenic 20.0%
!!! CATTCAATGCAAATTTTATA+TGG - Chr1:28382770-28382789 None:intergenic 20.0%
!!! GTGTTTATATAACGAATTTT+CGG - Chr1:28381892-28381911 None:intergenic 20.0%
!!! TATATAAGGTATCATTTGTT+AGG + Chr1:28382894-28382913 MsG0180001864.01.T01:intron 20.0%
!!! TTAGAGTGATTTTATTTAGA+TGG + Chr1:28381597-28381616 MsG0180001864.01.T01:intron 20.0%
! AAAAATATGAACTACCAAGA+AGG - Chr1:28384440-28384459 None:intergenic 25.0%
! AGATGTGAAAAAAGTTCTTT+AGG + Chr1:28381533-28381552 MsG0180001864.01.T01:intron 25.0%
! AGATTGTAATGAAAAATGGT+TGG - Chr1:28383992-28384011 None:intergenic 25.0%
! AGTAGTAACTTTATTGTGAA+GGG - Chr1:28383000-28383019 None:intergenic 25.0%
! ATAGAAGCTAGTTAATTAGT+TGG - Chr1:28383113-28383132 None:intergenic 25.0%
! ATATTACATGAATAGATGTG+GGG - Chr1:28383252-28383271 None:intergenic 25.0%
! ATGAAAAGAGAAAAATGGTT+GGG + Chr1:28383856-28383875 MsG0180001864.01.T01:intron 25.0%
! GAGTATAATAAAGGAAAATG+AGG - Chr1:28384266-28384285 None:intergenic 25.0%
! TAGATATGATCAAAGAGAAA+TGG - Chr1:28382219-28382238 None:intergenic 25.0%
! TATAACAATAAGCTATTTGG+AGG + Chr1:28382286-28382305 MsG0180001864.01.T01:intron 25.0%
! TATATTATTGGTGTATGTGT+CGG + Chr1:28384522-28384541 MsG0180001864.01.T01:intron 25.0%
! TATGAAAAGAGAAAAATGGT+TGG + Chr1:28383855-28383874 MsG0180001864.01.T01:intron 25.0%
! TCCAAGATTGTAATGAAAAA+TGG - Chr1:28383996-28384015 None:intergenic 25.0%
! TTCATTACAATCTTGGAAAA+TGG + Chr1:28383999-28384018 MsG0180001864.01.T01:intron 25.0%
! TTTACTTACAGAATTCAGTT+TGG + Chr1:28383510-28383529 MsG0180001864.01.T01:intron 25.0%
!! ACAATGTTAGAGTTGATTAT+TGG - Chr1:28383046-28383065 None:intergenic 25.0%
!! ACTAGTTTACAAACAATGAA+GGG - Chr1:28382597-28382616 None:intergenic 25.0%
!! CAATGTTAGAGTTGATTATT+GGG - Chr1:28383045-28383064 None:intergenic 25.0%
!! GAAAAAAGTTCTTTAGGAAA+AGG + Chr1:28381539-28381558 MsG0180001864.01.T01:intron 25.0%
!! TACTAGTTTACAAACAATGA+AGG - Chr1:28382598-28382617 None:intergenic 25.0%
!! TTTTGTCTATTAAGCTGTAA+AGG - Chr1:28383285-28383304 None:intergenic 25.0%
!!! AAATAAGCAGGTGTTTTTTA+CGG + Chr1:28381859-28381878 MsG0180001864.01.T01:intron 25.0%
!!! ACCATTTTTCATTACAATCT+TGG + Chr1:28383992-28384011 MsG0180001864.01.T01:intron 25.0%
!!! ATAGGGCTATTTTGTAAAAT+AGG - Chr1:28383079-28383098 None:intergenic 25.0%
!!! CTTATTTGCTGTTTGTTAAA+TGG - Chr1:28381993-28382012 None:intergenic 25.0%
!!! GCTTTGAGATTTAGTATATA+TGG + Chr1:28383568-28383587 MsG0180001864.01.T01:intron 25.0%
!!! TATCGCTATTTTTCCATTTT+GGG + Chr1:28385226-28385245 MsG0180001864.01.T01:CDS 25.0%
!!! TGATGCCATTTATTTTTATG+TGG + Chr1:28381509-28381528 MsG0180001864.01.T01:intron 25.0%
!!! TTATCGCTATTTTTCCATTT+TGG + Chr1:28385225-28385244 MsG0180001864.01.T01:CDS 25.0%
!!! TTGTTTTGTATTAGTGCTTT+TGG + Chr1:28381573-28381592 MsG0180001864.01.T01:intron 25.0%
AAAACCAGAAAACTAATACG+AGG + Chr1:28384985-28385004 MsG0180001864.01.T01:CDS 30.0%
ACTAAGCTGAAAATAGCTTA+TGG + Chr1:28381779-28381798 MsG0180001864.01.T01:intron 30.0%
ACTGGCAATTGAGAAATTAT+GGG + Chr1:28384872-28384891 MsG0180001864.01.T01:CDS 30.0%
AGATGTAAATCAGTGATGAT+GGG + Chr1:28383958-28383977 MsG0180001864.01.T01:intron 30.0%
ATACCTTTAACAAACAAGTG+TGG + Chr1:28383912-28383931 MsG0180001864.01.T01:intron 30.0%
ATATGATCAAAGAGAAATGG+AGG - Chr1:28382216-28382235 None:intergenic 30.0%
ATGAAGGATTCAAGATTCAA+TGG - Chr1:28384126-28384145 None:intergenic 30.0%
ATGAGGAAGATGATGAATAT+GGG + Chr1:28381340-28381359 MsG0180001864.01.T01:CDS 30.0%
ATTTCCAATAACTTCCTTCT+TGG + Chr1:28384423-28384442 MsG0180001864.01.T01:intron 30.0%
CTAGTTTACAAACAATGAAG+GGG - Chr1:28382596-28382615 None:intergenic 30.0%
CTGTATAATTATGAGCAGAA+TGG + Chr1:28383330-28383349 MsG0180001864.01.T01:intron 30.0%
CTTAAGAGATAGGAAAGAAT+AGG + Chr1:28382948-28382967 MsG0180001864.01.T01:intron 30.0%
GAAATGAAACCTTGAAGTTA+AGG + Chr1:28383665-28383684 MsG0180001864.01.T01:intron 30.0%
GAGTAGTAACTTTATTGTGA+AGG - Chr1:28383001-28383020 None:intergenic 30.0%
GCTACAACGTTATAGTATAA+TGG + Chr1:28382436-28382455 MsG0180001864.01.T01:intron 30.0%
GTAGTAACTTTATTGTGAAG+GGG - Chr1:28382999-28383018 None:intergenic 30.0%
GTGTTTAATCAGAAGAATTG+AGG + Chr1:28384391-28384410 MsG0180001864.01.T01:intron 30.0%
GTTTCTAAATCTCTCAAAGA+TGG + Chr1:28384187-28384206 MsG0180001864.01.T01:intron 30.0%
TAAAATTTGCATTGAATGGC+TGG + Chr1:28382772-28382791 MsG0180001864.01.T01:intron 30.0%
TAAATCTCTCAAAGATGGTT+TGG + Chr1:28384192-28384211 MsG0180001864.01.T01:intron 30.0%
TACCTTTAACAAACAAGTGT+GGG + Chr1:28383913-28383932 MsG0180001864.01.T01:intron 30.0%
TAGTTTACAAACAATGAAGG+GGG - Chr1:28382595-28382614 None:intergenic 30.0%
TATAATCGAAAGAGAACATG+AGG + Chr1:28382237-28382256 MsG0180001864.01.T01:intron 30.0%
TATGATCAAAGAGAAATGGA+GGG - Chr1:28382215-28382234 None:intergenic 30.0%
TATGGTTCAATAAGACATGT+AGG - Chr1:28382859-28382878 None:intergenic 30.0%
TCAAGAAGAATATGAAGATG+AGG + Chr1:28381323-28381342 MsG0180001864.01.T01:CDS 30.0%
TCAATAAGACATGTAGGTTA+AGG - Chr1:28382853-28382872 None:intergenic 30.0%
TCATCTTCATATTCTTCTTG+AGG - Chr1:28381324-28381343 None:intergenic 30.0%
TCTGATACAAACTTCAGATT+AGG - Chr1:28383482-28383501 None:intergenic 30.0%
TGAAAGAACACTTAAGAGAT+AGG + Chr1:28382938-28382957 MsG0180001864.01.T01:intron 30.0%
TGAGCATCATCTTAGATTTA+TGG + Chr1:28383441-28383460 MsG0180001864.01.T01:intron 30.0%
TTCATTCGAATCCAATTCTT+GGG - Chr1:28382922-28382941 None:intergenic 30.0%
TTGTACTAAATCACTTGTAG+CGG - Chr1:28382485-28382504 None:intergenic 30.0%
TTGTTGAAGTTGAAGTTTGA+AGG - Chr1:28381289-28381308 None:intergenic 30.0%
TTTCATTCGAATCCAATTCT+TGG - Chr1:28382923-28382942 None:intergenic 30.0%
! AAGATGCTTTAGATAGTTTG+TGG + Chr1:28381434-28381453 MsG0180001864.01.T01:CDS 30.0%
! CACTTGTTTGTTAAAGGTAT+CGG - Chr1:28383912-28383931 None:intergenic 30.0%
! CTTGAAGTTAAGGTTTGTTT+GGG + Chr1:28383675-28383694 MsG0180001864.01.T01:intron 30.0%
! TAAATCTCAAAGCACTTGTA+TGG - Chr1:28383561-28383580 None:intergenic 30.0%
! TGAAATGATAGTGCTAAAGT+GGG + Chr1:28382088-28382107 MsG0180001864.01.T01:intron 30.0%
! TTAAGGTTTGTTTGGGAATT+AGG + Chr1:28383682-28383701 MsG0180001864.01.T01:intron 30.0%
! TTTGGGAGAGAACTTTTAAA+GGG + Chr1:28383774-28383793 MsG0180001864.01.T01:intron 30.0%
!! AGAAGGAAATAGTGGAATTT+TGG + Chr1:28381411-28381430 MsG0180001864.01.T01:CDS 30.0%
!! ATGTGCATTGACATTTTTGT+TGG + Chr1:28384702-28384721 MsG0180001864.01.T01:intron 30.0%
!!! AGTGCAGGTTTTAAATCTTA+TGG + Chr1:28384750-28384769 MsG0180001864.01.T01:intron 30.0%
!!! CAGGTTTTAAATCTTATGGT+TGG + Chr1:28384754-28384773 MsG0180001864.01.T01:CDS 30.0%
!!! CTCTGTTACTGTTATTTTAC+AGG + Chr1:28384052-28384071 MsG0180001864.01.T01:intron 30.0%
!!! TTAGTTTTCTGGTTTTCTTC+CGG - Chr1:28384981-28385000 None:intergenic 30.0%
AAACCTGAAACCAATGGAAT+GGG + Chr1:28383195-28383214 MsG0180001864.01.T01:intron 35.0%
AACATGAGGATAAACTGCAT+AGG + Chr1:28382251-28382270 MsG0180001864.01.T01:intron 35.0%
ACAGAAGAAACTGAAGAAGA+AGG + Chr1:28381394-28381413 MsG0180001864.01.T01:CDS 35.0%
ACTACCAAGAAGGAAGTTAT+TGG - Chr1:28384430-28384449 None:intergenic 35.0%
ACTGAAGAAGAAGGAAATAG+TGG + Chr1:28381403-28381422 MsG0180001864.01.T01:CDS 35.0%
AGAAAAATGGTTGGGAGAAT+TGG + Chr1:28383864-28383883 MsG0180001864.01.T01:intron 35.0%
AGTACATCATACATGGAAGT+TGG + Chr1:28382730-28382749 MsG0180001864.01.T01:intron 35.0%
AGTTGGTTGAGGTTGTAATA+GGG - Chr1:28383096-28383115 None:intergenic 35.0%
ATAATTGCTGTGTTGCATTG+TGG + Chr1:28384635-28384654 MsG0180001864.01.T01:intron 35.0%
CAAAGGATGAATATGGAAAG+TGG + Chr1:28385149-28385168 MsG0180001864.01.T01:CDS 35.0%
CAATTGAGAAATTATGGGGA+CGG + Chr1:28384877-28384896 MsG0180001864.01.T01:CDS 35.0%
CACTGGCAATTGAGAAATTA+TGG + Chr1:28384871-28384890 MsG0180001864.01.T01:CDS 35.0%
CAGATGTAAATCAGTGATGA+TGG + Chr1:28383957-28383976 MsG0180001864.01.T01:intron 35.0%
CCAAACAAACCTTAACTTCA+AGG - Chr1:28383677-28383696 None:intergenic 35.0%
CTGGCAATTGAGAAATTATG+GGG + Chr1:28384873-28384892 MsG0180001864.01.T01:CDS 35.0%
CTGTTGAAGTACATCATACA+TGG + Chr1:28382723-28382742 MsG0180001864.01.T01:intron 35.0%
CTTTAGCACTATCATTTCAG+AGG - Chr1:28382087-28382106 None:intergenic 35.0%
GATGAGGAAGATGATGAATA+TGG + Chr1:28381339-28381358 MsG0180001864.01.T01:CDS 35.0%
GCTAGTTAATTAGTTGGTTG+AGG - Chr1:28383107-28383126 None:intergenic 35.0%
GCTTTACAACAGCATTGTTA+AGG - Chr1:28384342-28384361 None:intergenic 35.0%
GGAATTAGGAAAGGAAGAAA+GGG + Chr1:28383696-28383715 MsG0180001864.01.T01:intron 35.0%
GTATGATGTACTTCAACAGT+TGG - Chr1:28382722-28382741 None:intergenic 35.0%
GTGGATAAGCTTAAATAAGC+AGG + Chr1:28381847-28381866 MsG0180001864.01.T01:intron 35.0%
GTTAATACATCCTGATCACT+TGG + Chr1:28383620-28383639 MsG0180001864.01.T01:intron 35.0%
GTTTGTTTGGGAATTAGGAA+AGG + Chr1:28383687-28383706 MsG0180001864.01.T01:intron 35.0%
TAAAAGTTCTCTCCCAAACA+AGG - Chr1:28383772-28383791 None:intergenic 35.0%
TAACTTCCAGAACAGAAAGT+TGG - Chr1:28383604-28383623 None:intergenic 35.0%
TAGTTGGTTGAGGTTGTAAT+AGG - Chr1:28383097-28383116 None:intergenic 35.0%
TGAATATGGGAAAGAAGAGA+AGG + Chr1:28381353-28381372 MsG0180001864.01.T01:CDS 35.0%
TGTTTGTGTCAGTACTTCTT+AGG + Chr1:28384576-28384595 MsG0180001864.01.T01:CDS 35.0%
TTTGTTAGGAACCCAAGAAT+TGG + Chr1:28382908-28382927 MsG0180001864.01.T01:intron 35.0%
! AATCTAAGATGATGCTCACT+AGG - Chr1:28383439-28383458 None:intergenic 35.0%
! AGATAGTTTGTGGATTCTCA+AGG + Chr1:28381444-28381463 MsG0180001864.01.T01:CDS 35.0%
! ATTCTTCTTGAGGTTTGTTC+TGG - Chr1:28381314-28381333 None:intergenic 35.0%
! ATTTTTCCATTTTGGGCACA+TGG + Chr1:28385233-28385252 MsG0180001864.01.T01:CDS 35.0%
! CCTTGAAGTTAAGGTTTGTT+TGG + Chr1:28383674-28383693 MsG0180001864.01.T01:intron 35.0%
! CTGAAATGATAGTGCTAAAG+TGG + Chr1:28382087-28382106 MsG0180001864.01.T01:intron 35.0%
! GTTGGCTTACTAGAAAATGT+TGG - Chr1:28382704-28382723 None:intergenic 35.0%
! GTTTGGGAGAGAACTTTTAA+AGG + Chr1:28383773-28383792 MsG0180001864.01.T01:intron 35.0%
! TACCCACACTTGTTTGTTAA+AGG - Chr1:28383918-28383937 None:intergenic 35.0%
! TATTTGATAACACTACCCTG+TGG - Chr1:28382376-28382395 None:intergenic 35.0%
! TTGACATTTTTGTTGGTGTG+AGG + Chr1:28384709-28384728 MsG0180001864.01.T01:intron 35.0%
!! AAATCAGTGATGATGGGTAA+TGG + Chr1:28383964-28383983 MsG0180001864.01.T01:intron 35.0%
!! AGAAATGGGTTTTGTGGAAA+AGG - Chr1:28381200-28381219 None:intergenic 35.0%
!! AGAAGTACTGACACAAACAT+CGG - Chr1:28384575-28384594 None:intergenic 35.0%
!! AGAATGAGAAATGGGTTTTG+TGG - Chr1:28381206-28381225 None:intergenic 35.0%
!! GAAATGGGTTTTGTGGAAAA+GGG - Chr1:28381199-28381218 None:intergenic 35.0%
!! GAAGACAACTGATTTTCACT+CGG + Chr1:28383367-28383386 MsG0180001864.01.T01:intron 35.0%
!! GGTATTTTCTCACCTTGTTT+GGG + Chr1:28383757-28383776 MsG0180001864.01.T01:intron 35.0%
!! GTTTGTTAAAGGTATCGGAA+GGG - Chr1:28383907-28383926 None:intergenic 35.0%
!! TGTTTGTTAAAGGTATCGGA+AGG - Chr1:28383908-28383927 None:intergenic 35.0%
!! TTAAATGGCTTGGCAGATTT+TGG - Chr1:28381978-28381997 None:intergenic 35.0%
!! TTGCTGTTTGTTAAATGGCT+TGG - Chr1:28381988-28382007 None:intergenic 35.0%
!! TTGGGAGAGAACTTTTAAAG+GGG + Chr1:28383775-28383794 MsG0180001864.01.T01:intron 35.0%
AAAACTAATACGAGGAAGGC+GGG + Chr1:28384993-28385012 MsG0180001864.01.T01:CDS 40.0%
AACCATGATGCAAGGATGAT+GGG - Chr1:28384786-28384805 None:intergenic 40.0%
AATCCTTCACGAAATGCCTA+TGG + Chr1:28381945-28381964 MsG0180001864.01.T01:intron 40.0%
ACATGGAAGTTGGAACTGAA+TGG + Chr1:28382740-28382759 MsG0180001864.01.T01:intron 40.0%
ACCGTTCTCAAATTTCAAGG+TGG + Chr1:28383535-28383554 MsG0180001864.01.T01:intron 40.0%
ACTTCCAAACCTGAAACCAA+TGG + Chr1:28383189-28383208 MsG0180001864.01.T01:intron 40.0%
AGATACGCGAGAATGAGAAA+TGG - Chr1:28381215-28381234 None:intergenic 40.0%
AGGAGAATAAAGAGGTTGAG+GGG - Chr1:28381164-28381183 None:intergenic 40.0%
AGGGTCACAAAGGATGAATA+TGG + Chr1:28385142-28385161 MsG0180001864.01.T01:CDS 40.0%
AGTAACAGAGCAGATTACAG+TGG - Chr1:28384042-28384061 None:intergenic 40.0%
ATAAGCAATCGAACCAAGAG+GGG - Chr1:28385209-28385228 None:intergenic 40.0%
ATATGGGAAAGAAGAGAAGG+TGG + Chr1:28381356-28381375 MsG0180001864.01.T01:CDS 40.0%
ATCCACTTGTGAGACTACTT+GGG - Chr1:28381833-28381852 None:intergenic 40.0%
ATTTGCATTGAATGGCTGGT+TGG + Chr1:28382776-28382795 MsG0180001864.01.T01:intron 40.0%
CAAACCTGAAACCAATGGAA+TGG + Chr1:28383194-28383213 MsG0180001864.01.T01:intron 40.0%
CAGAATGGTGCGCAAAAAAT+TGG + Chr1:28383345-28383364 MsG0180001864.01.T01:intron 40.0%
CATCATTGGAATTCCAACGT+GGG - Chr1:28381255-28381274 None:intergenic 40.0%
CATGGATGAGGAGAATAAAG+AGG - Chr1:28381172-28381191 None:intergenic 40.0%
CCAGAAAACTAATACGAGGA+AGG + Chr1:28384989-28385008 MsG0180001864.01.T01:CDS 40.0%
CTCTCTCTACAACTCTATGA+AGG - Chr1:28384142-28384161 None:intergenic 40.0%
CTCTTTATTCTCCTCATCCA+TGG + Chr1:28381170-28381189 MsG0180001864.01.T01:CDS 40.0%
CTGTAAAAGTCTCCTCCATA+GGG + Chr1:28385265-28385284 MsG0180001864.01.T01:CDS 40.0%
GAAAACTAATACGAGGAAGG+CGG + Chr1:28384992-28385011 MsG0180001864.01.T01:CDS 40.0%
GAACTCAAAAACCTCACCTT+GGG - Chr1:28382573-28382592 None:intergenic 40.0%
GAGGAGAATAAAGAGGTTGA+GGG - Chr1:28381165-28381184 None:intergenic 40.0%
GATAAGCAATCGAACCAAGA+GGG - Chr1:28385210-28385229 None:intergenic 40.0%
GATACGCGAGAATGAGAAAT+GGG - Chr1:28381214-28381233 None:intergenic 40.0%
GCAGTAAAAACCAAGTGATC+AGG - Chr1:28383633-28383652 None:intergenic 40.0%
GCCACCTTGAAATTTGAGAA+CGG - Chr1:28383539-28383558 None:intergenic 40.0%
GGATGAATATGGAAAGTGGT+AGG + Chr1:28385153-28385172 MsG0180001864.01.T01:CDS 40.0%
GGGAATTAGGAAAGGAAGAA+AGG + Chr1:28383695-28383714 MsG0180001864.01.T01:intron 40.0%
GTGACCGTTCTCAAATTTCA+AGG + Chr1:28383532-28383551 MsG0180001864.01.T01:intron 40.0%
TAGAAAGCAACCATGATGCA+AGG - Chr1:28384794-28384813 None:intergenic 40.0%
TAGAGATGCTTGTTCGTGTT+TGG + Chr1:28382122-28382141 MsG0180001864.01.T01:intron 40.0%
TATCCACTTGTGAGACTACT+TGG - Chr1:28381834-28381853 None:intergenic 40.0%
TCATCATTGGAATTCCAACG+TGG - Chr1:28381256-28381275 None:intergenic 40.0%
TGAGGAGAATAAAGAGGTTG+AGG - Chr1:28381166-28381185 None:intergenic 40.0%
TGCTGTTGTAAAGCTTGTCT+TGG + Chr1:28384348-28384367 MsG0180001864.01.T01:intron 40.0%
TTAGTTAGCATTTGTGCAGC+TGG - Chr1:28382522-28382541 None:intergenic 40.0%
TTCATCCTATACTTGCGCTT+TGG - Chr1:28384915-28384934 None:intergenic 40.0%
! AATGATAGTGCTAAAGTGGG+AGG + Chr1:28382091-28382110 MsG0180001864.01.T01:intron 40.0%
! AATGCCATGAGGAAAGCTTT+TGG - Chr1:28384822-28384841 None:intergenic 40.0%
! AGATTTTGGACAACCACCAT+AGG - Chr1:28381964-28381983 None:intergenic 40.0%
! ATGAGAGTGTATGCGATAGA+TGG + Chr1:28381079-28381098 MsG0180001864.01.T01:CDS 40.0%
! ATGCCATGAGGAAAGCTTTT+GGG - Chr1:28384821-28384840 None:intergenic 40.0%
! CTCAAAGATGGTTTGGCAAT+TGG + Chr1:28384199-28384218 MsG0180001864.01.T01:intron 40.0%
! CTCGTGTGTCATTCACATTT+CGG - Chr1:28384947-28384966 None:intergenic 40.0%
! GGGTATTTTCTCACCTTGTT+TGG + Chr1:28383756-28383775 MsG0180001864.01.T01:intron 40.0%
! TGAATTCATTTTCGCAGTGC+AGG + Chr1:28384735-28384754 MsG0180001864.01.T01:intron 40.0%
! TGGCTTTTGCTTGATCTTTC+AGG - Chr1:28383411-28383430 None:intergenic 40.0%
! TTTTGGCCAACTTTCTGTTC+TGG + Chr1:28383595-28383614 MsG0180001864.01.T01:intron 40.0%
!! AGGTCGAAAAGTGTCATCAT+TGG - Chr1:28381269-28381288 None:intergenic 40.0%
!! ATTCCCATTCCATTGGTTTC+AGG - Chr1:28383201-28383220 None:intergenic 40.0%
!! CATTCCATTGGTTTCAGGTT+TGG - Chr1:28383196-28383215 None:intergenic 40.0%
!!! CCTTCCTCGTATTAGTTTTC+TGG - Chr1:28384992-28385011 None:intergenic 40.0%
!!! TAAGCAGGTGTTTTTTACGG+CGG + Chr1:28381862-28381881 MsG0180001864.01.T01:intron 40.0%
AAAATGTGATACGCCCCTCT+TGG + Chr1:28385193-28385212 MsG0180001864.01.T01:CDS 45.0%
AAACTAATACGAGGAAGGCG+GGG + Chr1:28384994-28385013 MsG0180001864.01.T01:CDS 45.0%
AAAGCTCAAGTTCCCTATGG+AGG - Chr1:28385280-28385299 None:intergenic 45.0%
AAATAAGCCCAAACGCACAC+AGG + Chr1:28382357-28382376 MsG0180001864.01.T01:intron 45.0%
AAGCAAGGAAAGGGTCACAA+AGG + Chr1:28385132-28385151 MsG0180001864.01.T01:CDS 45.0%
AATAAGCCCAAACGCACACA+GGG + Chr1:28382358-28382377 MsG0180001864.01.T01:intron 45.0%
ACCAAGCATTCCCATTCCAT+TGG - Chr1:28383208-28383227 None:intergenic 45.0%
ACCAATGGAATGGGAATGCT+TGG + Chr1:28383204-28383223 MsG0180001864.01.T01:intron 45.0%
AGAGAGGTAACCAAGGAATG+TGG - Chr1:28381138-28381157 None:intergenic 45.0%
AGCGCAAGTATAGGATGAAG+AGG + Chr1:28384916-28384935 MsG0180001864.01.T01:CDS 45.0%
AGGAGATCACAAGCAAGGAA+AGG + Chr1:28385122-28385141 MsG0180001864.01.T01:CDS 45.0%
AGTGGAGAGGGAAATGGAAA+GGG + Chr1:28383732-28383751 MsG0180001864.01.T01:intron 45.0%
ATAACACTACCCTGTGGTGT+TGG - Chr1:28382405-28382424 None:intergenic 45.0%
ATGATGCTCACTAGGATGCA+TGG - Chr1:28383431-28383450 None:intergenic 45.0%
CAACAAGGAGATCACAAGCA+AGG + Chr1:28385117-28385136 MsG0180001864.01.T01:CDS 45.0%
CAACCATGATGCAAGGATGA+TGG - Chr1:28384787-28384806 None:intergenic 45.0%
CGATAAGCAATCGAACCAAG+AGG - Chr1:28385211-28385230 None:intergenic 45.0%
CTTTGTCCATGTGCCCAAAA+TGG - Chr1:28385242-28385261 None:intergenic 45.0%
GCAAACCAAAGCGCAAGTAT+AGG + Chr1:28384907-28384926 MsG0180001864.01.T01:CDS 45.0%
GCTGTAAAAGTCTCCTCCAT+AGG + Chr1:28385264-28385283 MsG0180001864.01.T01:CDS 45.0%
GGAACTCAAAAACCTCACCT+TGG - Chr1:28382574-28382593 None:intergenic 45.0%
GGAGATCACAAGCAAGGAAA+GGG + Chr1:28385123-28385142 MsG0180001864.01.T01:CDS 45.0%
GGTAGTTGAGAACAACGGTT+CGG + Chr1:28385028-28385047 MsG0180001864.01.T01:CDS 45.0%
TATCGCTGTTGCGTGAATGT+CGG - Chr1:28384469-28384488 None:intergenic 45.0%
TATCGGAAGGGAGTCTTAGA+GGG - Chr1:28383895-28383914 None:intergenic 45.0%
TATTGTGAAGGGGAAACCCT+TGG - Chr1:28382989-28383008 None:intergenic 45.0%
TCATCCCATCCACCAAAACT+TGG - Chr1:28385077-28385096 None:intergenic 45.0%
TCGTGGGTAGTTGAGAACAA+CGG + Chr1:28385023-28385042 MsG0180001864.01.T01:CDS 45.0%
TTGGGCAGCATTATCAGTAG+CGG - Chr1:28382555-28382574 None:intergenic 45.0%
! AAAGCTTGTCTTGGTGTGTG+TGG + Chr1:28384357-28384376 MsG0180001864.01.T01:intron 45.0%
! AGGAAGAAAGGGAAAAGCGT+AGG + Chr1:28383707-28383726 MsG0180001864.01.T01:intron 45.0%
! GAAGAAAGGGAAAAGCGTAG+GGG + Chr1:28383709-28383728 MsG0180001864.01.T01:intron 45.0%
! GCATCATGGTTGCTTTCTAC+CGG + Chr1:28384795-28384814 MsG0180001864.01.T01:CDS 45.0%
! GCTTGTGATCTCCTTGTTGT+TGG - Chr1:28385116-28385135 None:intergenic 45.0%
! GGAAGAAAGGGAAAAGCGTA+GGG + Chr1:28383708-28383727 MsG0180001864.01.T01:intron 45.0%
! TGGAAAGTGGTAGGTTGAGT+AGG + Chr1:28385162-28385181 MsG0180001864.01.T01:CDS 45.0%
!! AACAACGGTTCGGTTGATAG+TGG + Chr1:28385038-28385057 MsG0180001864.01.T01:CDS 45.0%
!! ATGCACCAAGTTTTGGTGGA+TGG + Chr1:28385069-28385088 MsG0180001864.01.T01:CDS 45.0%
!! CACCAAAACTTGGTGCATCT+CGG - Chr1:28385067-28385086 None:intergenic 45.0%
!! GGAGAGAACTTTTAAAGGGG+TGG + Chr1:28383778-28383797 MsG0180001864.01.T01:intron 45.0%
!! TGCACCAAGTTTTGGTGGAT+GGG + Chr1:28385070-28385089 MsG0180001864.01.T01:CDS 45.0%
!! TTTTGGTGGATGGGATGACT+TGG + Chr1:28385079-28385098 MsG0180001864.01.T01:CDS 45.0%
!! TATATTAAAAAAAACTAAAA+TGG - Chr1:28381473-28381492 None:intergenic 5.0%
AACACTACCCTGTGTGCGTT+TGG - Chr1:28382368-28382387 None:intergenic 50.0%
AACCAAGGAATGTGGTGCCT+TGG - Chr1:28381130-28381149 None:intergenic 50.0%
ACACTACCCTGTGTGCGTTT+GGG - Chr1:28382367-28382386 None:intergenic 50.0%
CATCAACACCACTACTGCCA+AGG + Chr1:28381110-28381129 MsG0180001864.01.T01:CDS 50.0%
CCAACGTGGGAAGTTGTTAG+AGG - Chr1:28381242-28381261 None:intergenic 50.0%
CCACCATAGGCATTTCGTGA+AGG - Chr1:28381951-28381970 None:intergenic 50.0%
CCTCTAACAACTTCCCACGT+TGG + Chr1:28381239-28381258 MsG0180001864.01.T01:CDS 50.0%
CCTTCACGAAATGCCTATGG+TGG + Chr1:28381948-28381967 MsG0180001864.01.T01:intron 50.0%
CTCCCAAGTAGTCTCACAAG+TGG + Chr1:28381828-28381847 MsG0180001864.01.T01:intron 50.0%
GAGAGGGAAATGGAAAGGGA+GGG + Chr1:28383736-28383755 MsG0180001864.01.T01:intron 50.0%
GAGGGATTGCTAATGCCATG+AGG - Chr1:28384833-28384852 None:intergenic 50.0%
GAGTGGAGAGGGAAATGGAA+AGG + Chr1:28383731-28383750 MsG0180001864.01.T01:intron 50.0%
GCGAGAAATCTCTCCTCCAA+GGG + Chr1:28382970-28382989 MsG0180001864.01.T01:intron 50.0%
GTATCGGAAGGGAGTCTTAG+AGG - Chr1:28383896-28383915 None:intergenic 50.0%
TCGTGAAGGATTGTCCACCA+TGG - Chr1:28381937-28381956 None:intergenic 50.0%
TGCCCATCATCCTTGCATCA+TGG + Chr1:28384781-28384800 MsG0180001864.01.T01:CDS 50.0%
TGGGAAAGAAGAGAAGGTGG+TGG + Chr1:28381359-28381378 MsG0180001864.01.T01:CDS 50.0%
TTTGTGGAAAAGGGTCGCCA+TGG - Chr1:28381190-28381209 None:intergenic 50.0%
! AGCCGAGATGCACCAAGTTT+TGG + Chr1:28385062-28385081 MsG0180001864.01.T01:CDS 50.0%
! CATGAGGAAAGCTTTTGGGC+CGG - Chr1:28384817-28384836 None:intergenic 50.0%
! CGGTGTTAGTGTCAGTGTTG+TGG + Chr1:28384542-28384561 MsG0180001864.01.T01:intron 50.0%
! GCTACTGATAATGCTGCCCA+AGG + Chr1:28382554-28382573 MsG0180001864.01.T01:intron 50.0%
! TGATAATGCTGCCCAAGGTG+AGG + Chr1:28382559-28382578 MsG0180001864.01.T01:intron 50.0%
!! CAAGTGCTGACTGACTGAGA+GGG - Chr1:28384851-28384870 None:intergenic 50.0%
!! CACACGAGTTGATGAAGAGC+CGG + Chr1:28384959-28384978 MsG0180001864.01.T01:CDS 50.0%
!! CGAGATGCACCAAGTTTTGG+TGG + Chr1:28385065-28385084 MsG0180001864.01.T01:CDS 50.0%
!! CTTGCGCTTTGGTTTGCTCT+CGG - Chr1:28384904-28384923 None:intergenic 50.0%
!!! CAGGTGTTTTTTACGGCGGA+AGG + Chr1:28381866-28381885 MsG0180001864.01.T01:intron 50.0%
AAAGCGTAGGGGAGTGGAGA+GGG + Chr1:28383720-28383739 MsG0180001864.01.T01:intron 55.0%
AATAGCAGCGCCAACACCAC+AGG + Chr1:28382392-28382411 MsG0180001864.01.T01:intron 55.0%
ATAGCAGCGCCAACACCACA+GGG + Chr1:28382393-28382412 MsG0180001864.01.T01:intron 55.0%
ATGTGGTGCCTTGGCAGTAG+TGG - Chr1:28381121-28381140 None:intergenic 55.0%
CAGTCAGTCAGCACTTGCAC+TGG + Chr1:28384854-28384873 MsG0180001864.01.T01:CDS 55.0%
CGGCCCAAAAGCTTTCCTCA+TGG + Chr1:28384815-28384834 MsG0180001864.01.T01:CDS 55.0%
GAAAAGGGTCGCCATGGATG+AGG - Chr1:28381184-28381203 None:intergenic 55.0%
GGAGAGGGAAATGGAAAGGG+AGG + Chr1:28383735-28383754 MsG0180001864.01.T01:intron 55.0%
GGCGAGAAATCTCTCCTCCA+AGG + Chr1:28382969-28382988 MsG0180001864.01.T01:intron 55.0%
TAGGGGAGTGGAGAGGGAAA+TGG + Chr1:28383726-28383745 MsG0180001864.01.T01:intron 55.0%
TGTGAAGGGGAAACCCTTGG+AGG - Chr1:28382986-28383005 None:intergenic 55.0%
! AAAAGCGTAGGGGAGTGGAG+AGG + Chr1:28383719-28383738 MsG0180001864.01.T01:intron 55.0%
! AAGGGAAAAGCGTAGGGGAG+TGG + Chr1:28383714-28383733 MsG0180001864.01.T01:intron 55.0%
! AATGGCTGGTTGGCGAGGAA+TGG + Chr1:28382786-28382805 MsG0180001864.01.T01:intron 55.0%
! CATTGAATGGCTGGTTGGCG+AGG + Chr1:28382781-28382800 MsG0180001864.01.T01:intron 55.0%
! TGCCAAGGCACCACATTCCT+TGG + Chr1:28381125-28381144 MsG0180001864.01.T01:CDS 55.0%
!! GCAAGTGCTGACTGACTGAG+AGG - Chr1:28384852-28384871 None:intergenic 55.0%
!! GGGAATGCTTGGTGTGCTAC+AGG + Chr1:28383215-28383234 MsG0180001864.01.T01:intron 55.0%
AGAGGTTGAGGGGTCGAGAG+AGG - Chr1:28381154-28381173 None:intergenic 60.0%
AGCCTACAACGCTGCCATGG+TGG + Chr1:28381920-28381939 MsG0180001864.01.T01:intron 60.0%
AGCGAGCTCGGCCAACAACA+AGG + Chr1:28385102-28385121 MsG0180001864.01.T01:CDS 60.0%
GGCAGCGTTGTAGGCTGCAA+AGG - Chr1:28381916-28381935 None:intergenic 60.0%
GGGGTCGAGAGAGGTAACCA+AGG - Chr1:28381145-28381164 None:intergenic 60.0%
GTCCACCATGGCAGCGTTGT+AGG - Chr1:28381925-28381944 None:intergenic 60.0%
TGCAGCCTACAACGCTGCCA+TGG + Chr1:28381917-28381936 MsG0180001864.01.T01:intron 60.0%
! GGGATGACTTGGAGCGAGCT+CGG + Chr1:28385090-28385109 MsG0180001864.01.T01:CDS 60.0%
GAAGGCGGGGATGCAGTCGT+GGG + Chr1:28385007-28385026 MsG0180001864.01.T01:CDS 65.0%
GGAAGGCGGGGATGCAGTCG+TGG + Chr1:28385006-28385025 MsG0180001864.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28381073 28385301 28381073 ID=MsG0180001864.01;Name=MsG0180001864.01
Chr1 mRNA 28381073 28385301 28381073 ID=MsG0180001864.01.T01;Parent=MsG0180001864.01;Name=MsG0180001864.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0|0|1|0|0|3|0|333
Chr1 exon 28381073 28381477 28381073 ID=MsG0180001864.01.T01:exon:18840;Parent=MsG0180001864.01.T01
Chr1 exon 28384551 28384597 28384551 ID=MsG0180001864.01.T01:exon:18841;Parent=MsG0180001864.01.T01
Chr1 exon 28384752 28385301 28384752 ID=MsG0180001864.01.T01:exon:18842;Parent=MsG0180001864.01.T01
Chr1 CDS 28381073 28381477 28381073 ID=MsG0180001864.01.T01:cds;Parent=MsG0180001864.01.T01
Chr1 CDS 28384551 28384597 28384551 ID=MsG0180001864.01.T01:cds;Parent=MsG0180001864.01.T01
Chr1 CDS 28384752 28385301 28384752 ID=MsG0180001864.01.T01:cds;Parent=MsG0180001864.01.T01
Gene Sequence

>MsG0180001864.01.T01

ATGATGATGAGAGTGTATGCGATAGATGGAAGCTTATCATCAACACCACTACTGCCAAGGCACCACATTCCTTGGTTACCTCTCTCGACCCCTCAACCTCTTTATTCTCCTCATCCATGGCGACCCTTTTCCACAAAACCCATTTCTCATTCTCGCGTATCTTTCTCCTCTAACAACTTCCCACGTTGGAATTCCAATGATGACACTTTTCGACCTTCAAACTTCAACTTCAACAATGCCAGAACAAACCTCAAGAAGAATATGAAGATGAGGAAGATGATGAATATGGGAAAGAAGAGAAGGTGGTGGTCTGATGAGTATACAGAAGAAACTGAAGAAGAAGGAAATAGTGGAATTTTGGAAGATGCTTTAGATAGTTTGTGGATTCTCAAGGTAACCATTTTATGTCAGTGTTGTGGCTCGTGTCCGATGTTTGTGTCAGTACTTCTTAGTGCAGGTTTTAAATCTTATGGTTGGACGCTGCCCATCATCCTTGCATCATGGTTGCTTTCTACCGGCCCAAAAGCTTTCCTCATGGCATTAGCAATCCCTCTCAGTCAGTCAGCACTTGCACTGGCAATTGAGAAATTATGGGGACGGACCGAGAGCAAACCAAAGCGCAAGTATAGGATGAAGAGGAAACGCCGAAATGTGAATGACACACGAGTTGATGAAGAGCCGGAAGAAAACCAGAAAACTAATACGAGGAAGGCGGGGATGCAGTCGTGGGTAGTTGAGAACAACGGTTCGGTTGATAGTGGCAGCCGAGATGCACCAAGTTTTGGTGGATGGGATGACTTGGAGCGAGCTCGGCCAACAACAAGGAGATCACAAGCAAGGAAAGGGTCACAAAGGATGAATATGGAAAGTGGTAGGTTGAGTAGGAGAGAAAGAAAATGTGATACGCCCCTCTTGGTTCGATTGCTTATCGCTATTTTTCCATTTTGGGCACATGGACAAAGATGCTGTAAAAGTCTCCTCCATAGGGAACTTGAGCTTTGA

Protein sequence

>MsG0180001864.01.T01

MMMRVYAIDGSLSSTPLLPRHHIPWLPLSTPQPLYSPHPWRPFSTKPISHSRVSFSSNNFPRWNSNDDTFRPSNFNFNNARTNLKKNMKMRKMMNMGKKRRWWSDEYTEETEEEGNSGILEDALDSLWILKVTILCQCCGSCPMFVSVLLSAGFKSYGWTLPIILASWLLSTGPKAFLMALAIPLSQSALALAIEKLWGRTESKPKRKYRMKRKRRNVNDTRVDEEPEENQKTNTRKAGMQSWVVENNGSVDSGSRDAPSFGGWDDLERARPTTRRSQARKGSQRMNMESGRLSRRERKCDTPLLVRLLIAIFPFWAHGQRCCKSLLHRELEL*