AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040214.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040214.01.T02 MTR_7g086430 99.077 542 5 0 1 542 1 542 0.0 1093
MsG0780040214.01.T02 MTR_7g086430 98.786 412 5 0 1 412 1 412 0.0 830
MsG0780040214.01.T02 MTR_5g082260 30.754 517 293 14 10 503 5 479 1.11e-53 190
MsG0780040214.01.T02 MTR_4g010130 28.414 454 269 16 94 525 126 545 1.50e-27 117
MsG0780040214.01.T01 MTR_7g086430 99.077 542 5 0 1 542 1 542 0.0 1093
MsG0780040214.01.T01 MTR_7g086430 98.786 412 5 0 1 412 1 412 0.0 830
MsG0780040214.01.T01 MTR_5g082260 30.754 517 293 14 10 503 5 479 1.11e-53 190
MsG0780040214.01.T01 MTR_4g010130 28.414 454 269 16 94 525 126 545 1.50e-27 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040214.01.T02 AT5G35220 68.384 563 142 8 1 542 1 548 0.0 749
MsG0780040214.01.T02 AT5G35210 89.431 123 13 0 329 451 1543 1665 4.19e-63 224
MsG0780040214.01.T02 AT5G05740 28.037 535 339 12 2 525 13 512 2.04e-46 170
MsG0780040214.01.T02 AT5G05740 27.820 532 341 12 2 525 13 509 1.37e-45 168
MsG0780040214.01.T02 AT5G05740 32.383 386 229 8 141 525 187 541 1.65e-43 163
MsG0780040214.01.T02 AT1G17870 28.795 448 275 13 94 525 133 552 1.37e-30 126
MsG0780040214.01.T01 AT5G35220 68.384 563 142 8 1 542 1 548 0.0 749
MsG0780040214.01.T01 AT5G35210 89.431 123 13 0 329 451 1543 1665 4.19e-63 224
MsG0780040214.01.T01 AT5G05740 28.037 535 339 12 2 525 13 512 2.04e-46 170
MsG0780040214.01.T01 AT5G05740 27.820 532 341 12 2 525 13 509 1.37e-45 168
MsG0780040214.01.T01 AT5G05740 32.383 386 229 8 141 525 187 541 1.65e-43 163
MsG0780040214.01.T01 AT1G17870 28.795 448 275 13 94 525 133 552 1.37e-30 126

Find 24 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTGCTCATTATAAATA+TGG 0.190155 7:+74475543 None:intergenic
CTACAACCTTTCTAAATAAA+TGG 0.216107 7:+74475402 None:intergenic
TCTTGACTCTTCTTCCTGTT+TGG 0.224026 7:-74475640 MsG0780040214.01.T01:CDS
CTTGACTCTTCTTCCTGTTT+GGG 0.253391 7:-74475639 MsG0780040214.01.T01:CDS
GGATGAGCTTGCAGAGGAAC+TGG 0.328392 7:-74475618 MsG0780040214.01.T01:CDS
AATTGAATTAACCTTTCCTT+TGG 0.375547 7:+74475496 None:intergenic
TATGGGCCATTTATTTAGAA+AGG 0.416868 7:-74475408 MsG0780040214.01.T01:intron
AGCAGTGAAATGAAATATAT+AGG 0.433869 7:-74475529 MsG0780040214.01.T01:three_prime_UTR
TCATTTAAGCATGGTTTCTC+CGG 0.439754 7:+74475722 None:intergenic
TCTGCAAGCTCATCCCAAAC+AGG 0.459412 7:+74475626 None:intergenic
ACATGGAGACAGACATTTGT+GGG 0.464417 7:-74475683 MsG0780040214.01.T01:CDS
TTAAATGACGTGACAGAAGT+TGG 0.539625 7:-74475707 MsG0780040214.01.T01:CDS
CATAATGTTCGTGTTAACAA+TGG 0.544081 7:+74475450 None:intergenic
AACATGGAGACAGACATTTG+TGG 0.544900 7:-74475684 MsG0780040214.01.T01:CDS
CTTGCAGAGGAACTGGGCAT+AGG 0.570390 7:-74475611 MsG0780040214.01.T01:CDS
GAAAATCATTACCAAAGGAA+AGG 0.581591 7:-74475507 MsG0780040214.01.T01:three_prime_UTR
TCTGTCACGTCATTTAAGCA+TGG 0.582580 7:+74475713 None:intergenic
ACGTGACAGAAGTTGGAACA+TGG 0.597819 7:-74475700 MsG0780040214.01.T01:CDS
GATGAGCTTGCAGAGGAACT+GGG 0.604398 7:-74475617 MsG0780040214.01.T01:CDS
TATAGGAAAATCATTACCAA+AGG 0.607998 7:-74475512 MsG0780040214.01.T01:three_prime_UTR
TGTTTGGGATGAGCTTGCAG+AGG 0.630439 7:-74475624 MsG0780040214.01.T01:CDS
CATGGAGACAGACATTTGTG+GGG 0.635920 7:-74475682 MsG0780040214.01.T01:CDS
TAACCATTAAAACTAAAATG+TGG 0.650160 7:+74475580 None:intergenic
ATGGAGACAGACATTTGTGG+GGG 0.683523 7:-74475681 MsG0780040214.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTCATTATTCAATATT+AGG - Chr7:74479241-74479260 MsG0780040214.01.T01:intron 10.0%
!!! ACAATTTTATTTTTATTTAC+AGG - Chr7:74479267-74479286 MsG0780040214.01.T01:intron 10.0%
!!! ATTGAATCTTTTTAATATTT+AGG + Chr7:74476419-74476438 None:intergenic 10.0%
!! AACAATAAAATATTTAGACA+CGG + Chr7:74477414-74477433 None:intergenic 15.0%
!! TAATTTCATATGTATAAAAG+TGG + Chr7:74478102-74478121 None:intergenic 15.0%
!! TATTAAAAAGATTCAATACT+TGG - Chr7:74476422-74476441 MsG0780040214.01.T01:intron 15.0%
!!! AGATATATATAGCTTTTTAT+TGG - Chr7:74479575-74479594 MsG0780040214.01.T01:intron 15.0%
!!! CGACTTTATTTTATTAATTT+AGG - Chr7:74478914-74478933 MsG0780040214.01.T01:CDS 15.0%
!!! TTTTGTTAACTAACTTTTAA+TGG - Chr7:74476651-74476670 MsG0780040214.01.T01:intron 15.0%
!! AAAGTACATTATGTTTAAGA+AGG + Chr7:74479177-74479196 None:intergenic 20.0%
!! CATGTAATGAAACAAAAATT+AGG + Chr7:74479833-74479852 None:intergenic 20.0%
!! GCATTTAGTATTTACTAATA+TGG - Chr7:74479670-74479689 MsG0780040214.01.T01:intron 20.0%
!! GTAAAGAAAAAGAATACTAT+GGG - Chr7:74480622-74480641 MsG0780040214.01.T01:five_prime_UTR 20.0%
!! TAACCATTAAAACTAAAATG+TGG + Chr7:74480470-74480489 None:intergenic 20.0%
!! TACATTATATTTATACCTGA+TGG - Chr7:74478309-74478328 MsG0780040214.01.T01:intron 20.0%
!! TACTAAAATACATAAACAGA+CGG + Chr7:74478585-74478604 None:intergenic 20.0%
!! TGTAAAGAAAAAGAATACTA+TGG - Chr7:74480621-74480640 MsG0780040214.01.T01:five_prime_UTR 20.0%
!!! AAAATTAAGGATAAGCTTTT+TGG - Chr7:74476931-74476950 MsG0780040214.01.T01:CDS 20.0%
!!! AAATTAGATTTTACGCTAAA+AGG - Chr7:74478116-74478135 MsG0780040214.01.T01:intron 20.0%
!!! AAATTATATTCTAGAAAGGA+AGG + Chr7:74478869-74478888 None:intergenic 20.0%
!!! AATGCTTAATTTTACTTGTT+TGG + Chr7:74478379-74478398 None:intergenic 20.0%
!!! AATGTTGATTCTTTGATATA+TGG - Chr7:74475929-74475948 MsG0780040214.01.T01:intron 20.0%
!!! ATGCTTAATTTTACTTGTTT+GGG + Chr7:74478378-74478397 None:intergenic 20.0%
!!! GGTAAAATTATATTCTAGAA+AGG + Chr7:74478873-74478892 None:intergenic 20.0%
!!! TAACCACATTTTAGTTTTAA+TGG - Chr7:74480464-74480483 MsG0780040214.01.T01:CDS 20.0%
!!! TAATTTTGACTGTATGAAAT+GGG - Chr7:74479551-74479570 MsG0780040214.01.T01:intron 20.0%
!!! TCATTCTATTTTGGTTTTTA+TGG - Chr7:74476619-74476638 MsG0780040214.01.T01:intron 20.0%
!!! TTATTTTTATTTACAGGTGT+GGG - Chr7:74479273-74479292 MsG0780040214.01.T01:intron 20.0%
!!! TTTATTTTTATTTACAGGTG+TGG - Chr7:74479272-74479291 MsG0780040214.01.T01:intron 20.0%
!!! TTTTCAATCAATAACAAAGA+CGG - Chr7:74475693-74475712 MsG0780040214.01.T01:CDS 20.0%
!!! TTTTTGAAATTACAGAAGTT+AGG + Chr7:74477951-74477970 None:intergenic 20.0%
! AAATATTCTCATTCATGAGT+TGG - Chr7:74479758-74479777 MsG0780040214.01.T01:intron 25.0%
! AATTGAATTAACCTTTCCTT+TGG + Chr7:74480554-74480573 None:intergenic 25.0%
! AGCAGTGAAATGAAATATAT+AGG - Chr7:74480518-74480537 MsG0780040214.01.T01:CDS 25.0%
! ATATTTACTTGTCATACAGA+AGG - Chr7:74479386-74479405 MsG0780040214.01.T01:intron 25.0%
! ATCAATACTATTTGAACATC+AGG - Chr7:74477299-74477318 MsG0780040214.01.T01:CDS 25.0%
! ATTTAGGTAAAATACTCTAG+TGG - Chr7:74478930-74478949 MsG0780040214.01.T01:CDS 25.0%
! ATTTCTCCATTGAAGAAAAA+TGG - Chr7:74475509-74475528 MsG0780040214.01.T01:three_prime_UTR 25.0%
! CATGAATGAGAATATTTATG+TGG + Chr7:74479755-74479774 None:intergenic 25.0%
! CCAATTGGTTACTATTAAAT+TGG - Chr7:74479452-74479471 MsG0780040214.01.T01:intron 25.0%
! CCAATTTAATAGTAACCAAT+TGG + Chr7:74479455-74479474 None:intergenic 25.0%
! CTACAACCTTTCTAAATAAA+TGG + Chr7:74480648-74480667 None:intergenic 25.0%
! CTATTATACAATGTCTCATT+AGG - Chr7:74477978-74477997 MsG0780040214.01.T01:intron 25.0%
! GAAAACTACACAAATAAGAT+AGG + Chr7:74478224-74478243 None:intergenic 25.0%
! GATAAGTAGAAACAATTGAT+CGG - Chr7:74479714-74479733 MsG0780040214.01.T01:intron 25.0%
! GATTGTCCTATTTCAAATTT+CGG - Chr7:74479428-74479447 MsG0780040214.01.T01:intron 25.0%
! GGTAAGTCTAATATTTGTTT+AGG - Chr7:74479930-74479949 MsG0780040214.01.T01:intron 25.0%
! GGTGAAAAAAATATATCTGA+CGG + Chr7:74480677-74480696 None:intergenic 25.0%
! TATAGGAAAATCATTACCAA+AGG - Chr7:74480535-74480554 MsG0780040214.01.T01:intron 25.0%
! TGAGACATTGTATAATAGTA+TGG + Chr7:74477976-74477995 None:intergenic 25.0%
! TGCTGATGTAAAGAAAATTA+AGG - Chr7:74476918-74476937 MsG0780040214.01.T01:CDS 25.0%
! TTCACTGCTCATTATAAATA+TGG + Chr7:74480507-74480526 None:intergenic 25.0%
! TTTCAATCAATAACAAAGAC+GGG - Chr7:74475694-74475713 MsG0780040214.01.T01:CDS 25.0%
! TTTCTCCATTGAAGAAAAAT+GGG - Chr7:74475510-74475529 MsG0780040214.01.T01:three_prime_UTR 25.0%
!! AGTATGCATACTTTATGTTT+TGG - Chr7:74479049-74479068 MsG0780040214.01.T01:CDS 25.0%
!! ATATTTATACCTGATGGATA+TGG - Chr7:74478315-74478334 MsG0780040214.01.T01:intron 25.0%
!! TCTTTTCATCGGAAATTTAA+GGG - Chr7:74477011-74477030 MsG0780040214.01.T01:intron 25.0%
!! TGCTTTGAATTTCACAATTA+AGG + Chr7:74479625-74479644 None:intergenic 25.0%
!! TGTTGTCTATCATTCTATTT+TGG - Chr7:74476610-74476629 MsG0780040214.01.T01:intron 25.0%
!! TTAATTTTCTTTACATCAGC+AGG + Chr7:74476919-74476938 None:intergenic 25.0%
!! TTCTTTTCATCGGAAATTTA+AGG - Chr7:74477010-74477029 MsG0780040214.01.T01:intron 25.0%
!!! AAACTTAACTGTTTTAAGCT+GGG + Chr7:74477801-74477820 None:intergenic 25.0%
!!! ATTTTTTGTCATATTTTCGC+AGG - Chr7:74480214-74480233 MsG0780040214.01.T01:intron 25.0%
!!! CTAATTTTGACTGTATGAAA+TGG - Chr7:74479550-74479569 MsG0780040214.01.T01:intron 25.0%
!!! GTATTTTAGTATGCATCTAA+AGG - Chr7:74478594-74478613 MsG0780040214.01.T01:CDS 25.0%
!!! GTCAGATATATTTTTTTCAC+CGG - Chr7:74480676-74480695 MsG0780040214.01.T01:five_prime_UTR 25.0%
!!! TTTTGGTTATTCAACCTTTT+GGG - Chr7:74476948-74476967 MsG0780040214.01.T01:intron 25.0%
!!! TTTTTGGTTATTCAACCTTT+TGG - Chr7:74476947-74476966 MsG0780040214.01.T01:intron 25.0%
!!! TTTTTTCCATACTCCAAAAT+CGG - Chr7:74477049-74477068 MsG0780040214.01.T01:intron 25.0%
AAGCATGTTAAAAGCTTGTA+TGG + Chr7:74479303-74479322 None:intergenic 30.0%
AAGCTGTTGAAAAGAGAAAA+GGG + Chr7:74480168-74480187 None:intergenic 30.0%
AATTCACATGTATCCAAATG+GGG - Chr7:74475633-74475652 MsG0780040214.01.T01:CDS 30.0%
AGTTTAACCATAGCATGAAT+TGG - Chr7:74479999-74480018 MsG0780040214.01.T01:intron 30.0%
ATAAGCTTTCTATGACTGTT+TGG + Chr7:74476140-74476159 None:intergenic 30.0%
ATTTCAAATTTCGGACCAAT+TGG - Chr7:74479437-74479456 MsG0780040214.01.T01:intron 30.0%
CAACATAGTGACATGAATAT+CGG + Chr7:74478014-74478033 None:intergenic 30.0%
CAATTCACATGTATCCAAAT+GGG - Chr7:74475632-74475651 MsG0780040214.01.T01:CDS 30.0%
CATAATGTTCGTGTTAACAA+TGG + Chr7:74480600-74480619 None:intergenic 30.0%
CTAACTATAGTATACACGTT+TGG + Chr7:74476194-74476213 None:intergenic 30.0%
CTGAAAAATAACCAAAAGAC+TGG + Chr7:74480071-74480090 None:intergenic 30.0%
CTTTGATATATGGCTCTTAT+TGG - Chr7:74475939-74475958 MsG0780040214.01.T01:intron 30.0%
GAAAATCATTACCAAAGGAA+AGG - Chr7:74480540-74480559 MsG0780040214.01.T01:intron 30.0%
GAAGCAAAAAGAAAAGTTGA+TGG + Chr7:74478276-74478295 None:intergenic 30.0%
GAAGTTAGGTAAAAGAGATA+AGG + Chr7:74477937-74477956 None:intergenic 30.0%
GATCTGATGAATCAAAAACA+TGG + Chr7:74477438-74477457 None:intergenic 30.0%
GTCAAAAGTTTCAGTTAGTT+TGG - Chr7:74478065-74478084 MsG0780040214.01.T01:intron 30.0%
TAAGCTTTCTATGACTGTTT+GGG + Chr7:74476139-74476158 None:intergenic 30.0%
TATAGTATACACGTTTGGAT+TGG + Chr7:74476189-74476208 None:intergenic 30.0%
TATGGGCCATTTATTTAGAA+AGG - Chr7:74480639-74480658 MsG0780040214.01.T01:five_prime_UTR 30.0%
TCAATTCACATGTATCCAAA+TGG - Chr7:74475631-74475650 MsG0780040214.01.T01:CDS 30.0%
TGGATACATGTGAATTGAAA+CGG + Chr7:74475629-74475648 None:intergenic 30.0%
TTCAATCAATAACAAAGACG+GGG - Chr7:74475695-74475714 MsG0780040214.01.T01:CDS 30.0%
TTTCATTACATGTTCTTGCA+GGG - Chr7:74479841-74479860 MsG0780040214.01.T01:intron 30.0%
TTTCCTGTATCACAAAAAAC+TGG - Chr7:74477672-74477691 MsG0780040214.01.T01:CDS 30.0%
! AGTTGATTCTTTCAAACTCA+TGG - Chr7:74476867-74476886 MsG0780040214.01.T01:intron 30.0%
! ATATTCTAGAAAGGAAGGAA+GGG + Chr7:74478864-74478883 None:intergenic 30.0%
! ATTGGTCCGAAATTTGAAAT+AGG + Chr7:74479437-74479456 None:intergenic 30.0%
! CAAAACACTTGCATAGTTTT+TGG + Chr7:74476526-74476545 None:intergenic 30.0%
! CGATAAGTACAACCTTTTTA+TGG - Chr7:74477089-74477108 MsG0780040214.01.T01:intron 30.0%
! CTTTTCATCGGAAATTTAAG+GGG - Chr7:74477012-74477031 MsG0780040214.01.T01:intron 30.0%
! TATATTCTAGAAAGGAAGGA+AGG + Chr7:74478865-74478884 None:intergenic 30.0%
! TATGTTGATTGACTCACTAT+TGG - Chr7:74478027-74478046 MsG0780040214.01.T01:intron 30.0%
! TCAAGAATTTCACTAGTTCT+GGG + Chr7:74477472-74477491 None:intergenic 30.0%
! TGTAACTATTACCAGTCTTT+TGG - Chr7:74480057-74480076 MsG0780040214.01.T01:intron 30.0%
! TTTTAAGCTGGGTAAAAAGT+AGG + Chr7:74477790-74477809 None:intergenic 30.0%
!! AAGTTCCCATTTTTCTTCAA+TGG + Chr7:74475518-74475537 None:intergenic 30.0%
!! CAAACTTAACTGTTTTAAGC+TGG + Chr7:74477802-74477821 None:intergenic 30.0%
!!! AACAATGGTTTTATCACAAG+CGG + Chr7:74480585-74480604 None:intergenic 30.0%
!!! AATCCAGTTTTTTGTGATAC+AGG + Chr7:74477678-74477697 None:intergenic 30.0%
!!! AGATATATTTTTTTCACCGG+TGG - Chr7:74480679-74480698 MsG0780040214.01.T01:five_prime_UTR 30.0%
!!! CAGTTTTTTACACAATTCCA+TGG - Chr7:74478248-74478267 MsG0780040214.01.T01:intron 30.0%
!!! TGGGTTTTTTTTAACACATG+AGG + Chr7:74476720-74476739 None:intergenic 30.0%
AAAGGAATAAAACGACGTTG+CGG + Chr7:74475479-74475498 None:intergenic 35.0%
AAATTTAAGGGGAAAGAGAG+AGG - Chr7:74477023-74477042 MsG0780040214.01.T01:intron 35.0%
AGAGAGAAATCCTCTTTGTT+TGG - Chr7:74476383-74476402 MsG0780040214.01.T01:intron 35.0%
AGCTGTTGAAAAGAGAAAAG+GGG + Chr7:74480167-74480186 None:intergenic 35.0%
AGGTAAAAGAGATAAGGAAG+AGG + Chr7:74477931-74477950 None:intergenic 35.0%
AGTAGAAACAATTGATCGGT+AGG - Chr7:74479718-74479737 MsG0780040214.01.T01:intron 35.0%
ATACATGTGAATTGAAACGG+TGG + Chr7:74475626-74475645 None:intergenic 35.0%
ATATAGCATCTCCATATCTG+GGG + Chr7:74477516-74477535 None:intergenic 35.0%
CAAAACATAGTCTATGACTC+CGG - Chr7:74477705-74477724 MsG0780040214.01.T01:intron 35.0%
CAAACGCACACAAAAAAGAA+CGG + Chr7:74477616-74477635 None:intergenic 35.0%
CAACAGAAACATTGATCTGT+GGG + Chr7:74476739-74476758 None:intergenic 35.0%
CAAGCTGTTGAAAAGAGAAA+AGG + Chr7:74480169-74480188 None:intergenic 35.0%
CATAGCAATTGTAGTGTAGT+GGG - Chr7:74476337-74476356 MsG0780040214.01.T01:intron 35.0%
CCAAATATCACCAAACAAAG+AGG + Chr7:74476396-74476415 None:intergenic 35.0%
CTATAGTTAGAAACTGCTAC+AGG - Chr7:74476204-74476223 MsG0780040214.01.T01:intron 35.0%
CTGGATTTGATGAAAGAAGA+AGG + Chr7:74478744-74478763 None:intergenic 35.0%
GATATAGCATCTCCATATCT+GGG + Chr7:74477517-74477536 None:intergenic 35.0%
GGAGAAATGAAGAAGATGAA+AGG + Chr7:74475497-74475516 None:intergenic 35.0%
GTCAAGAATTTCACTAGTTC+TGG + Chr7:74477473-74477492 None:intergenic 35.0%
GTGCAGTAAAATCTAAACAC+CGG + Chr7:74477727-74477746 None:intergenic 35.0%
GTGTTAAGAACCACAGATTT+GGG + Chr7:74479216-74479235 None:intergenic 35.0%
GTTTCATTACATGTTCTTGC+AGG - Chr7:74479840-74479859 MsG0780040214.01.T01:intron 35.0%
TAAAATAAAGTCGCAAGCAC+TGG + Chr7:74478907-74478926 None:intergenic 35.0%
TCAAGTAGACATATCACTTG+CGG - Chr7:74478672-74478691 MsG0780040214.01.T01:intron 35.0%
TCATTTAAGCATGGTTTCTC+CGG + Chr7:74480328-74480347 None:intergenic 35.0%
TCTACTTGAGTACTTCTATC+AGG + Chr7:74478661-74478680 None:intergenic 35.0%
TGACCACTTATACATTGCTA+GGG - Chr7:74479899-74479918 MsG0780040214.01.T01:intron 35.0%
TGCAATCATGTCATATCACT+TGG + Chr7:74478994-74479013 None:intergenic 35.0%
TGTGTTAAGAACCACAGATT+TGG + Chr7:74479217-74479236 None:intergenic 35.0%
TGTTAAGAACCACAGATTTG+GGG + Chr7:74479215-74479234 None:intergenic 35.0%
TTAAAGCCTCTATCTTCATC+AGG + Chr7:74475783-74475802 None:intergenic 35.0%
TTAAATGACGTGACAGAAGT+TGG - Chr7:74480340-74480359 MsG0780040214.01.T01:CDS 35.0%
TTAATCAGTAGAGCAACTCT+TGG - Chr7:74478826-74478845 MsG0780040214.01.T01:CDS 35.0%
TTACTGCTGATGGTTCAATT+TGG + Chr7:74478555-74478574 None:intergenic 35.0%
TTAGTCTACCTAGTGTTTAG+TGG - Chr7:74476252-74476271 MsG0780040214.01.T01:intron 35.0%
TTGACCACTTATACATTGCT+AGG - Chr7:74479898-74479917 MsG0780040214.01.T01:intron 35.0%
TTTCAAGGTTCTTTGCTACT+TGG - Chr7:74478802-74478821 MsG0780040214.01.T01:CDS 35.0%
! AAAATGTACCCTTTGAGAAG+TGG + Chr7:74475829-74475848 None:intergenic 35.0%
! ATGATTGCAGCACATCATTT+TGG - Chr7:74479005-74479024 MsG0780040214.01.T01:CDS 35.0%
! CCTCTTTGTTTGGTGATATT+TGG - Chr7:74476393-74476412 MsG0780040214.01.T01:intron 35.0%
! CTTTTCTCTTTTCAACAGCT+TGG - Chr7:74480167-74480186 MsG0780040214.01.T01:intron 35.0%
! GTACAACCTTTTTATGGTAG+AGG - Chr7:74477095-74477114 MsG0780040214.01.T01:intron 35.0%
! TCTTGTGTTCTTTTCTTGCT+TGG - Chr7:74475866-74475885 MsG0780040214.01.T01:intron 35.0%
! TGATTGCAGCACATCATTTT+GGG - Chr7:74479006-74479025 MsG0780040214.01.T01:CDS 35.0%
!! AAGAAAAGTTGATGGAACCA+TGG + Chr7:74478268-74478287 None:intergenic 35.0%
!! AAGAATTTCACTAGTTCTGG+GGG + Chr7:74477470-74477489 None:intergenic 35.0%
!! CAAGAATTTCACTAGTTCTG+GGG + Chr7:74477471-74477490 None:intergenic 35.0%
!! CAAGCACTGGATCTATATTT+AGG + Chr7:74478894-74478913 None:intergenic 35.0%
!! CTGTTGTTTCTTCTCACTAT+TGG - Chr7:74477234-74477253 MsG0780040214.01.T01:CDS 35.0%
!! GTTGATGATGAAGGTGAAAA+TGG - Chr7:74475717-74475736 MsG0780040214.01.T01:CDS 35.0%
!! TTTTGGAAAAGGTGCACTAA+TGG - Chr7:74479867-74479886 MsG0780040214.01.T01:intron 35.0%
!!! ACACTTGCATAGTTTTTGGT+TGG + Chr7:74476522-74476541 None:intergenic 35.0%
!!! AGTTTTTGGTTGGGAACAAA+TGG + Chr7:74476512-74476531 None:intergenic 35.0%
!!! CACTTGCATAGTTTTTGGTT+GGG + Chr7:74476521-74476540 None:intergenic 35.0%
!!! TCATTTTCGATGTTTGCTGT+TGG - Chr7:74478718-74478737 MsG0780040214.01.T01:intron 35.0%
AAAGCTGCCAAGAGTGATAT+GGG + Chr7:74478415-74478434 None:intergenic 40.0%
AACATGGAGACAGACATTTG+TGG - Chr7:74480363-74480382 MsG0780040214.01.T01:CDS 40.0%
AATCTGCAATCCAGCACATA+TGG + Chr7:74478163-74478182 None:intergenic 40.0%
AATTGAAACGGTGGTTGTAG+TGG + Chr7:74475617-74475636 None:intergenic 40.0%
ACATGGAGACAGACATTTGT+GGG - Chr7:74480364-74480383 MsG0780040214.01.T01:CDS 40.0%
ACTTATACATTGCTAGGGCT+GGG - Chr7:74479904-74479923 MsG0780040214.01.T01:intron 40.0%
AGCCAGAAGAAACAACACTT+TGG - Chr7:74477193-74477212 MsG0780040214.01.T01:intron 40.0%
AGGCAACACTGTTGTTACAT+TGG + Chr7:74475763-74475782 None:intergenic 40.0%
ATGGGTTTGACACCATAACA+CGG + Chr7:74475447-74475466 None:intergenic 40.0%
ATTAGAAGTTGTCCATCCGT+GGG + Chr7:74476694-74476713 None:intergenic 40.0%
CAAATCAATCCCCAAATCTG+TGG - Chr7:74479203-74479222 MsG0780040214.01.T01:CDS 40.0%
CAAGTAGACATATCACTTGC+GGG - Chr7:74478673-74478692 MsG0780040214.01.T01:intron 40.0%
CACAAGTTTCTTGAAGAAGG+AGG - Chr7:74476446-74476465 MsG0780040214.01.T01:intron 40.0%
CACTTAAGCCACTAAACACT+AGG + Chr7:74476263-74476282 None:intergenic 40.0%
CAGGTTCCTCTACCATAAAA+AGG + Chr7:74477104-74477123 None:intergenic 40.0%
CAGTGTGTCAAAGTTAACTG+CGG + Chr7:74479075-74479094 None:intergenic 40.0%
CATATCACTTGGAAACAGCT+TGG + Chr7:74478983-74479002 None:intergenic 40.0%
CCACTACACTACAATTGCTA+TGG + Chr7:74476339-74476358 None:intergenic 40.0%
CCATAGCAATTGTAGTGTAG+TGG - Chr7:74476336-74476355 MsG0780040214.01.T01:intron 40.0%
CGGTTAAAAGTTACTGCTGA+TGG + Chr7:74478565-74478584 None:intergenic 40.0%
CTCCTTCTTCAAGAAACTTG+TGG + Chr7:74476448-74476467 None:intergenic 40.0%
CTCTATTCGACGACATATTG+CGG + Chr7:74476315-74476334 None:intergenic 40.0%
CTTGACTCTTCTTCCTGTTT+GGG - Chr7:74480408-74480427 MsG0780040214.01.T01:CDS 40.0%
CTTGAGTACTTCTATCAGGA+AGG + Chr7:74478657-74478676 None:intergenic 40.0%
GAACCTTGAAACAACATGCT+AGG + Chr7:74478793-74478812 None:intergenic 40.0%
GAATTGCATCTCAGGTATGT+TGG - Chr7:74477274-74477293 MsG0780040214.01.T01:CDS 40.0%
GCAACAGAAACATTGATCTG+TGG + Chr7:74476740-74476759 None:intergenic 40.0%
GCTCTAACCAATTCATGCTA+TGG + Chr7:74480009-74480028 None:intergenic 40.0%
GGATATAGCATCTCCATATC+TGG + Chr7:74477518-74477537 None:intergenic 40.0%
GGGAGAGATTTGAATGAAGA+AGG - Chr7:74476357-74476376 MsG0780040214.01.T01:intron 40.0%
GTGATATGGGGAATGAAGAA+AGG + Chr7:74478402-74478421 None:intergenic 40.0%
GTTTAGTGGCTTAAGTGTAG+CGG - Chr7:74476266-74476285 MsG0780040214.01.T01:intron 40.0%
TAAGGAAGAGGATAGAGACT+CGG + Chr7:74477919-74477938 None:intergenic 40.0%
TCATCAAATCCAGATGTAGC+TGG - Chr7:74478751-74478770 MsG0780040214.01.T01:intron 40.0%
TCTGTCACGTCATTTAAGCA+TGG + Chr7:74480337-74480356 None:intergenic 40.0%
TCTTCTCACTATTGGTACCT+CGG - Chr7:74477242-74477261 MsG0780040214.01.T01:CDS 40.0%
TCTTGACTCTTCTTCCTGTT+TGG - Chr7:74480407-74480426 MsG0780040214.01.T01:CDS 40.0%
TTAGACACGGCAGAAGAAAA+CGG + Chr7:74477401-74477420 None:intergenic 40.0%
TTCAAACTCATGGAACTCCT+TGG - Chr7:74476877-74476896 MsG0780040214.01.T01:intron 40.0%
TTCATTCCCCATATCACTCT+TGG - Chr7:74478405-74478424 MsG0780040214.01.T01:intron 40.0%
TTGACACCATAACACGGAAA+TGG + Chr7:74475441-74475460 None:intergenic 40.0%
TTGGGAACAAATGGAGAAGA+GGG + Chr7:74476503-74476522 None:intergenic 40.0%
! AAAGGTGCACTAATGGTCTT+TGG - Chr7:74479874-74479893 MsG0780040214.01.T01:intron 40.0%
! AGCTTTTAACATGCTTCCAG+TGG - Chr7:74479307-74479326 MsG0780040214.01.T01:intron 40.0%
! CTTTTAACATGCTTCCAGTG+GGG - Chr7:74479309-74479328 MsG0780040214.01.T01:intron 40.0%
! GATGTTTTGTCAGAGATCAC+CGG - Chr7:74480306-74480325 MsG0780040214.01.T01:CDS 40.0%
! GCTTTTAACATGCTTCCAGT+GGG - Chr7:74479308-74479327 MsG0780040214.01.T01:intron 40.0%
! TCTAGTGGATCATTATGCGT+GGG - Chr7:74478945-74478964 MsG0780040214.01.T01:CDS 40.0%
! TGTGTTCTTTTCTTGCTTGG+TGG - Chr7:74475869-74475888 MsG0780040214.01.T01:intron 40.0%
! TGTTGGTTGGTTGGTTGTTT+GGG + Chr7:74475383-74475402 None:intergenic 40.0%
! TTCTCTTTTCAACAGCTTGG+TGG - Chr7:74480170-74480189 MsG0780040214.01.T01:intron 40.0%
!! AAGTGTTGTTTCTTCTGGCT+CGG + Chr7:74477193-74477212 None:intergenic 40.0%
!! AGAATTTCACTAGTTCTGGG+GGG + Chr7:74477469-74477488 None:intergenic 40.0%
!! GAAGGGGTTGTTGATTTATC+AGG + Chr7:74475807-74475826 None:intergenic 40.0%
!! GTTCCTAGCATGTTGTTTCA+AGG - Chr7:74478787-74478806 MsG0780040214.01.T01:CDS 40.0%
!! TGAAGCACGTTGATTTCGAT+AGG - Chr7:74475661-74475680 MsG0780040214.01.T01:CDS 40.0%
!! TGCCAAAGTGTTGTTTCTTC+TGG + Chr7:74477198-74477217 None:intergenic 40.0%
!!! AACTAGCCGATTTTGGAGTA+TGG + Chr7:74477058-74477077 None:intergenic 40.0%
!!! GTAGTGGATTTTGTTCCTGA+AGG + Chr7:74475601-74475620 None:intergenic 40.0%
AACCCCTTCCACTTCTCAAA+GGG - Chr7:74475818-74475837 MsG0780040214.01.T01:intron 45.0%
AACCGGAACTCTGAGTTTAG+AGG + Chr7:74475561-74475580 None:intergenic 45.0%
AACTACACAACACACAGCCA+TGG + Chr7:74478625-74478644 None:intergenic 45.0%
AAGCTGCCAAGAGTGATATG+GGG + Chr7:74478414-74478433 None:intergenic 45.0%
AAGGTTGTACTTATCGCCAG+TGG + Chr7:74477085-74477104 None:intergenic 45.0%
AATCCCCAAGCAAGTGAAAG+AGG + Chr7:74480197-74480216 None:intergenic 45.0%
ACACTCTTCTCAGCTTCTGT+TGG + Chr7:74475400-74475419 None:intergenic 45.0%
ACCAAATCTCCAGCTACATC+TGG + Chr7:74478763-74478782 None:intergenic 45.0%
ACCGGAACTCTGAGTTTAGA+GGG + Chr7:74475560-74475579 None:intergenic 45.0%
ACCTCTAGCATATGGTGTCT+TGG - Chr7:74477556-74477575 MsG0780040214.01.T01:intron 45.0%
ACGTGACAGAAGTTGGAACA+TGG - Chr7:74480347-74480366 MsG0780040214.01.T01:CDS 45.0%
AGACTCGATGCAAAAGTGAC+TGG + Chr7:74478476-74478495 None:intergenic 45.0%
AGCAAACCAAAGCTAACACG+TGG + Chr7:74477156-74477175 None:intergenic 45.0%
ATATCTGCTAAGCTTCTGCG+TGG + Chr7:74476580-74476599 None:intergenic 45.0%
ATGGAGACAGACATTTGTGG+GGG - Chr7:74480366-74480385 MsG0780040214.01.T01:CDS 45.0%
ATTCAGACAGTCCTGATCCA+CGG - Chr7:74477124-74477143 MsG0780040214.01.T01:intron 45.0%
CAAAGCTGCCAAGAGTGATA+TGG + Chr7:74478416-74478435 None:intergenic 45.0%
CACTTATACATTGCTAGGGC+TGG - Chr7:74479903-74479922 MsG0780040214.01.T01:intron 45.0%
CAGCCCTAGCAATGTATAAG+TGG + Chr7:74479905-74479924 None:intergenic 45.0%
CAGTCATCTTTGTCCTCACT+TGG - Chr7:74476823-74476842 MsG0780040214.01.T01:intron 45.0%
CATATCACTCTTGGCAGCTT+TGG - Chr7:74478414-74478433 MsG0780040214.01.T01:intron 45.0%
CATGGAGACAGACATTTGTG+GGG - Chr7:74480365-74480384 MsG0780040214.01.T01:CDS 45.0%
CATTAGAAGTTGTCCATCCG+TGG + Chr7:74476695-74476714 None:intergenic 45.0%
CCTCTAGCATATGGTGTCTT+GGG - Chr7:74477557-74477576 MsG0780040214.01.T01:intron 45.0%
CGCAATATGTCGTCGAATAG+AGG - Chr7:74476313-74476332 MsG0780040214.01.T01:intron 45.0%
CGTGTTCCATTTCCGTGTTA+TGG - Chr7:74475432-74475451 MsG0780040214.01.T01:three_prime_UTR 45.0%
CTATACTGAAGCCCCAGATA+TGG - Chr7:74477502-74477521 MsG0780040214.01.T01:intron 45.0%
CTCTCCTCATGTAATGGTCA+CGG + Chr7:74480031-74480050 None:intergenic 45.0%
CTGCTATTGTATGTGCAGAG+CGG - Chr7:74479092-74479111 MsG0780040214.01.T01:CDS 45.0%
GAAATACCTGCCATATGTGC+TGG - Chr7:74478150-74478169 MsG0780040214.01.T01:intron 45.0%
GGCCACAAGTTTCTTGAAGA+AGG - Chr7:74476443-74476462 MsG0780040214.01.T01:intron 45.0%
GTGACCATTACATGAGGAGA+GGG - Chr7:74480030-74480049 MsG0780040214.01.T01:intron 45.0%
GTGCTTCAACTTTCCCCATT+TGG + Chr7:74475649-74475668 None:intergenic 45.0%
GTGTTGCCTGATGAAGATAG+AGG - Chr7:74475774-74475793 MsG0780040214.01.T01:intron 45.0%
GTTAGAAACTGCTACAGGCT+TGG - Chr7:74476209-74476228 MsG0780040214.01.T01:intron 45.0%
GTTGGGAACAAATGGAGAAG+AGG + Chr7:74476504-74476523 None:intergenic 45.0%
GTTGTACACAGATCCAAGTG+AGG + Chr7:74476839-74476858 None:intergenic 45.0%
TAAGCTTCTGCGTGGTAGAA+GGG + Chr7:74476572-74476591 None:intergenic 45.0%
TCAGCGTTACCTCTAGCATA+TGG - Chr7:74477548-74477567 MsG0780040214.01.T01:intron 45.0%
TCCAGATGTAGCTGGAGATT+TGG - Chr7:74478759-74478778 MsG0780040214.01.T01:intron 45.0%
TCCCTCTAAACTCAGAGTTC+CGG - Chr7:74475556-74475575 MsG0780040214.01.T01:three_prime_UTR 45.0%
TCTTCTCAGCTTCTGTTGGT+TGG + Chr7:74475396-74475415 None:intergenic 45.0%
TGCACATAGCCATATCCATC+AGG + Chr7:74478327-74478346 None:intergenic 45.0%
TGCATCTAAAGGCTGATCCA+TGG - Chr7:74478605-74478624 MsG0780040214.01.T01:intron 45.0%
TGGACCTCTTTCACTTGCTT+GGG - Chr7:74480190-74480209 MsG0780040214.01.T01:intron 45.0%
TGGGAACAAATGGAGAAGAG+GGG + Chr7:74476502-74476521 None:intergenic 45.0%
TTCCTGAAGGAACAGTGAAC+CGG + Chr7:74475588-74475607 None:intergenic 45.0%
! ACTCCAAAATCGGCTAGTTG+AGG - Chr7:74477059-74477078 MsG0780040214.01.T01:intron 45.0%
! CTCTAGTGGATCATTATGCG+TGG - Chr7:74478944-74478963 MsG0780040214.01.T01:CDS 45.0%
! CTGTTGGTTGGTTGGTTGTT+TGG + Chr7:74475384-74475403 None:intergenic 45.0%
! GTACCCTTTGAGAAGTGGAA+GGG + Chr7:74475824-74475843 None:intergenic 45.0%
! TACCCTTTGAGAAGTGGAAG+GGG + Chr7:74475823-74475842 None:intergenic 45.0%
! TCTGGGGCTTCAGTATAGTT+AGG + Chr7:74477500-74477519 None:intergenic 45.0%
! TGATGGATATGGCTATGTGC+AGG - Chr7:74478326-74478345 MsG0780040214.01.T01:intron 45.0%
! TGTACCCTTTGAGAAGTGGA+AGG + Chr7:74475825-74475844 None:intergenic 45.0%
!! AAAGACGGGGTTGATGATGA+AGG - Chr7:74475708-74475727 MsG0780040214.01.T01:CDS 45.0%
!! AACAGTGAACCGGTTTGAAC+CGG + Chr7:74475578-74475597 None:intergenic 45.0%
!! AACCTTTTGGGTGACCAAAG+AGG - Chr7:74476960-74476979 MsG0780040214.01.T01:intron 45.0%
!! ATGTTCTTGCAGGGTGCTTT+TGG - Chr7:74479850-74479869 MsG0780040214.01.T01:intron 45.0%
!! CAGCTTTGGTGCTATTACTC+AGG - Chr7:74478428-74478447 MsG0780040214.01.T01:intron 45.0%
!! GGTAACGCTGACTCAACAAA+TGG + Chr7:74477539-74477558 None:intergenic 45.0%
!! TAGCTTTGGTTTGCTGCGTA+AGG - Chr7:74477161-74477180 MsG0780040214.01.T01:intron 45.0%
!! TTGCAGGGTGCTTTTGGAAA+AGG - Chr7:74479856-74479875 MsG0780040214.01.T01:intron 45.0%
!!! GGAGAAGGCGTTCTTTTCAT+CGG - Chr7:74477000-74477019 MsG0780040214.01.T01:intron 45.0%
AAAACGACGTTGCGGTTCAG+AGG + Chr7:74475471-74475490 None:intergenic 50.0%
AAACGACGTTGCGGTTCAGA+GGG + Chr7:74475470-74475489 None:intergenic 50.0%
ACCATCCTGCAATCACGAGA+GGG + Chr7:74479143-74479162 None:intergenic 50.0%
ACTGTGTAGTGCTGTGACGA+CGG - Chr7:74477844-74477863 MsG0780040214.01.T01:intron 50.0%
AGAGCCGTGACCATTACATG+AGG - Chr7:74480024-74480043 MsG0780040214.01.T01:intron 50.0%
ATGTGCTTGAAACCCACGGA+TGG - Chr7:74476679-74476698 MsG0780040214.01.T01:intron 50.0%
ATTCACCCTCTCGTGATTGC+AGG - Chr7:74479135-74479154 MsG0780040214.01.T01:CDS 50.0%
CAACCCCTTCCACTTCTCAA+AGG - Chr7:74475817-74475836 MsG0780040214.01.T01:intron 50.0%
CACGGCAGAAGAAAACGGTA+AGG + Chr7:74477396-74477415 None:intergenic 50.0%
CCCAAGACACCATATGCTAG+AGG + Chr7:74477560-74477579 None:intergenic 50.0%
CGTGACCATTACATGAGGAG+AGG - Chr7:74480029-74480048 MsG0780040214.01.T01:intron 50.0%
CTAAGCTTCTGCGTGGTAGA+AGG + Chr7:74476573-74476592 None:intergenic 50.0%
CTCAGAGTTCCGGTTCAAAC+CGG - Chr7:74475566-74475585 MsG0780040214.01.T01:three_prime_UTR 50.0%
CTCCTCTTTGGTCACCCAAA+AGG + Chr7:74476965-74476984 None:intergenic 50.0%
GATAGCACAGCACCAGCAAA+GGG + Chr7:74478700-74478719 None:intergenic 50.0%
GATCAACCTTCTCAGGTCCA+AGG + Chr7:74476897-74476916 None:intergenic 50.0%
GATGAGCTTGCAGAGGAACT+GGG - Chr7:74480430-74480449 MsG0780040214.01.T01:CDS 50.0%
GCAATCACGAGAGGGTGAAT+TGG + Chr7:74479135-74479154 None:intergenic 50.0%
GCACATGTGCTTGAAACCCA+CGG - Chr7:74476675-74476694 MsG0780040214.01.T01:intron 50.0%
GGACCTCTTTCACTTGCTTG+GGG - Chr7:74480191-74480210 MsG0780040214.01.T01:intron 50.0%
GGAGGTAGGAATTGCATCTC+AGG - Chr7:74477266-74477285 MsG0780040214.01.T01:CDS 50.0%
GGATCAGGACTGTCTGAATC+AGG + Chr7:74477123-74477142 None:intergenic 50.0%
GGGAACAAATGGAGAAGAGG+GGG + Chr7:74476501-74476520 None:intergenic 50.0%
GTGGACCTCTTTCACTTGCT+TGG - Chr7:74480189-74480208 MsG0780040214.01.T01:intron 50.0%
TACCATCCTGCAATCACGAG+AGG + Chr7:74479144-74479163 None:intergenic 50.0%
TATGGCTATGTGCAGGAGGT+TGG - Chr7:74478333-74478352 MsG0780040214.01.T01:intron 50.0%
TCAGCAGGATCAACCTTCTC+AGG + Chr7:74476904-74476923 None:intergenic 50.0%
TCGATGCAAAAGTGACTGGC+TGG + Chr7:74478472-74478491 None:intergenic 50.0%
TCTCACTATTGGTACCTCGG+TGG - Chr7:74477245-74477264 MsG0780040214.01.T01:CDS 50.0%
TCTGCAAGCTCATCCCAAAC+AGG + Chr7:74480424-74480443 None:intergenic 50.0%
TGAGCCCTCTCCTCATGTAA+TGG + Chr7:74480037-74480056 None:intergenic 50.0%
TGATAGCACAGCACCAGCAA+AGG + Chr7:74478701-74478720 None:intergenic 50.0%
TGCAATCCAGCACATATGGC+AGG + Chr7:74478159-74478178 None:intergenic 50.0%
TGGATATGGCTATGTGCAGG+AGG - Chr7:74478329-74478348 MsG0780040214.01.T01:intron 50.0%
TTCAGACAGTCCTGATCCAC+GGG - Chr7:74477125-74477144 MsG0780040214.01.T01:intron 50.0%
TTCGCCAAAAGGCTCCTCTT+TGG + Chr7:74476977-74476996 None:intergenic 50.0%
! AACCGGTTCACTGTTCCTTC+AGG - Chr7:74475583-74475602 MsG0780040214.01.T01:exon 50.0%
! AGCTGAGAAGAGTGTGTCTG+TGG - Chr7:74475405-74475424 MsG0780040214.01.T01:intron 50.0%
! CTCAGCTTCTGTTGGTTGGT+TGG + Chr7:74475392-74475411 None:intergenic 50.0%
! GTGACCAAAGAGGAGCCTTT+TGG - Chr7:74476970-74476989 MsG0780040214.01.T01:intron 50.0%
! TGTTTGGGATGAGCTTGCAG+AGG - Chr7:74480423-74480442 MsG0780040214.01.T01:CDS 50.0%
!! CTTTGGTTTGCTGCGTAAGG+AGG - Chr7:74477164-74477183 MsG0780040214.01.T01:intron 50.0%
!! TGGCCTCAACTAGCCGATTT+TGG + Chr7:74477065-74477084 None:intergenic 50.0%
ACCCTCTCGTGATTGCAGGA+TGG - Chr7:74479139-74479158 MsG0780040214.01.T01:CDS 55.0%
ACGTTGCGGTTCAGAGGGAT+GGG + Chr7:74475465-74475484 None:intergenic 55.0%
ATTGGTACCTCGGTGGAGGT+AGG - Chr7:74477252-74477271 MsG0780040214.01.T01:CDS 55.0%
CACTATTGGTACCTCGGTGG+AGG - Chr7:74477248-74477267 MsG0780040214.01.T01:CDS 55.0%
CCTTCTCCCAGTTCGCCAAA+AGG + Chr7:74476988-74477007 None:intergenic 55.0%
CTTGCAGAGGAACTGGGCAT+AGG - Chr7:74480436-74480455 MsG0780040214.01.T01:CDS 55.0%
GGAACTCCTTGGACCTGAGA+AGG - Chr7:74476888-74476907 MsG0780040214.01.T01:intron 55.0%
GGATGAGCTTGCAGAGGAAC+TGG - Chr7:74480429-74480448 MsG0780040214.01.T01:CDS 55.0%
TACATTGCTAGGGCTGGGAG+TGG - Chr7:74479909-74479928 MsG0780040214.01.T01:intron 55.0%
TCAGACAGTCCTGATCCACG+GGG - Chr7:74477126-74477145 MsG0780040214.01.T01:intron 55.0%
TGCAATTCCTACCTCCACCG+AGG + Chr7:74477262-74477281 None:intergenic 55.0%
! AATCGGCTAGTTGAGGCCAC+TGG - Chr7:74477066-74477085 MsG0780040214.01.T01:intron 55.0%
! AGAGGAGCCTTTTGGCGAAC+TGG - Chr7:74476978-74476997 MsG0780040214.01.T01:intron 55.0%
! CCTTTTGGCGAACTGGGAGA+AGG - Chr7:74476985-74477004 MsG0780040214.01.T01:intron 55.0%
! GAGGAGCCTTTTGGCGAACT+GGG - Chr7:74476979-74476998 MsG0780040214.01.T01:intron 55.0%
ACAGTCCTGATCCACGGGGT+GGG - Chr7:74477130-74477149 MsG0780040214.01.T01:intron 60.0%
GACGTTGCGGTTCAGAGGGA+TGG + Chr7:74475466-74475485 None:intergenic 60.0%
GCTTCTGCGTGGTAGAAGGG+TGG + Chr7:74476569-74476588 None:intergenic 60.0%
GTGTAGTGCTGTGACGACGG+AGG - Chr7:74477847-74477866 MsG0780040214.01.T01:intron 60.0%
TCACTTGCGGGTCCCTTTGC+TGG - Chr7:74478685-74478704 MsG0780040214.01.T01:intron 60.0%
TCTGCGTGGTAGAAGGGTGG+TGG + Chr7:74476566-74476585 None:intergenic 60.0%
! CTTCCAGTGGGGTGCCTTGA+CGG - Chr7:74479320-74479339 MsG0780040214.01.T01:intron 60.0%
! GGTGGGCCACGTGTTAGCTT+TGG - Chr7:74477147-74477166 MsG0780040214.01.T01:intron 60.0%
GACAGTCCTGATCCACGGGG+TGG - Chr7:74477129-74477148 MsG0780040214.01.T01:intron 65.0%
GCACAGACCTGCCACCGTCA+AGG + Chr7:74479337-74479356 None:intergenic 65.0%
TGACGGTGGCAGGTCTGTGC+AGG - Chr7:74479337-74479356 MsG0780040214.01.T01:intron 65.0%
CTAACACGTGGCCCACCCCG+TGG + Chr7:74477144-74477163 None:intergenic 70.0%
! CCACCGTCAAGGCACCCCAC+TGG + Chr7:74479326-74479345 None:intergenic 70.0%
! CCAGTGGGGTGCCTTGACGG+TGG - Chr7:74479323-74479342 MsG0780040214.01.T01:intron 70.0%
! TGGGGTGCCTTGACGGTGGC+AGG - Chr7:74479327-74479346 MsG0780040214.01.T01:intron 70.0%
CGTGGCCCACCCCGTGGATC+AGG + Chr7:74477138-74477157 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 74475361 74480708 74475361 ID=MsG0780040214.01;Name=MsG0780040214.01
Chr7 mRNA 74475361 74480708 74475361 ID=MsG0780040214.01.T01;Parent=MsG0780040214.01;Name=MsG0780040214.01.T01;_AED=0.32;_eAED=0.32;_QI=167|1|1|1|0.7|0.72|11|190|542
Chr7 exon 74475361 74475388 74475361 ID=MsG0780040214.01.T01:exon:661;Parent=MsG0780040214.01.T01
Chr7 exon 74475430 74475750 74475430 ID=MsG0780040214.01.T01:exon:660;Parent=MsG0780040214.01.T01
Chr7 five_prime_UTR 74480542 74480708 74480542 ID=MsG0780040214.01.T01:five_prime_utr;Parent=MsG0780040214.01.T01
Chr7 CDS 74480230 74480541 74480230 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74478782 74479243 74478782 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74478474 74478614 74478474 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74477620 74477721 74477620 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74477215 74477426 74477215 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74476909 74476959 74476909 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74476711 74476780 74476711 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74476139 74476207 74476139 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74475834 74475884 74475834 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 CDS 74475592 74475750 74475592 ID=MsG0780040214.01.T01:cds;Parent=MsG0780040214.01.T01
Chr7 three_prime_UTR 74475430 74475591 74475430 ID=MsG0780040214.01.T01:three_prime_utr;Parent=MsG0780040214.01.T01
Chr7 three_prime_UTR 74475361 74475388 74475361 ID=MsG0780040214.01.T01:three_prime_utr;Parent=MsG0780040214.01.T01
Chr7 mRNA 74475393 74480708 74475393 ID=MsG0780040214.01.T02;Parent=MsG0780040214.01;Name=MsG0780040214.01.T02;_AED=0.32;_eAED=0.32;_QI=167|1|1|1|0.77|0.9|10|199|542
Chr7 exon 74475393 74475750 74475393 ID=MsG0780040214.01.T02:exon:662;Parent=MsG0780040214.01.T02
Chr7 five_prime_UTR 74480542 74480708 74480542 ID=MsG0780040214.01.T02:five_prime_utr;Parent=MsG0780040214.01.T02
Chr7 CDS 74480230 74480541 74480230 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74478782 74479243 74478782 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74478474 74478614 74478474 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74477620 74477721 74477620 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74477215 74477426 74477215 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74476909 74476959 74476909 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74476711 74476780 74476711 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74476139 74476207 74476139 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74475834 74475884 74475834 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 CDS 74475592 74475750 74475592 ID=MsG0780040214.01.T02:cds;Parent=MsG0780040214.01.T02
Chr7 three_prime_UTR 74475393 74475591 74475393 ID=MsG0780040214.01.T02:three_prime_utr;Parent=MsG0780040214.01.T02
Gene Sequence

>MsG0780040214.01.T02

ATGGGAACTTTAACAAATTGCACTTTACTCCCTCTAAACTCAGAGTTCCGGTTCAAACCGGTTCACTGTTCCTTCAGGAACAAAATCCACTACAACCACCGTTTCAATTCACATGTATCCAAATGGGGAAAGTTGAAGCACGTTGATTTCGATAGGTTTAAGTGTTTTTCAATCAATAACAAAGACGGGGTTGATGATGAAGGTGAAAATGGTAACAAGAATGATTCTAAATCCAATGTAACAACAGTGTTGCCTGATGAAGATAGAGGCTTTAATCCTGATAAATCAACAACCCCTTCCACTTCTCAAAGGTCATCTTTGTCCTCACTTGGATCTGTGTACAACAATTTTCAAGTTGATTCTTTCAAACTCATGGAACTCCTTGGACCTGAGAAGGTTGATCCTGCTGATGTAAAGAAAATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTGACCAAAGAGGAGCCTTTTGGCGAACTGGGAGAAGGCGTTCTTTTCATCGGAAATTTAAGGGGAAAGAGAGAGGACGTTTTTTCCATACTCCAAAATCGGCTAGTTGAGGCCACTGGCGATAAGTACAACCTTTTTATGGTAGAGGAACCTGATTCAGACAGTCCTGATCCACGGGGTGGGCCACGTGTTAGCTTTGGTTTGCTGCGTAAGGAGGTTTCCGAGCCAGAAGAAACAACACTTTGGCAATATGTCGTTGCATCTCTGTTGTTTCTTCTCACTATTGGTACCTCGGTGGAGGTAGGAATTGCATCTCAGATCAACAGACTCCCCCCAGAACTAGTGAAATTCTTGACAGATCCTAACTATACTGAAGCCCCAGATATGGAGATGCTATATCCATTTGTTGAGTCAGCGTTACCTCTAGCATATGGTGTCTTGGGAGTTCTTCTATTTCATGAGGTTGGACACTTTTTAGCTGCATTTCCCAAACAAGTAAAATTAAGCATTCCTTTCTTCATTCCCCATATCACTCTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCTATCCTTCCTGATAGAAGTACTCAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTGCTATCATTTTCGATGTTTGCTGTTGGCCTTCTTCTTTCATCAAATCCAGATGTAGCTGGAGATTTGGTGCAAGTTCCTAGCATGTTGTTTCAAGGTTCTTTGCTACTTGGTTTAATCAGTAGAGCAACTCTTGGTTATGCAGCGGTTCATGCTGCAACAGTTCCAATTCACCCTCTCGTGATTGCAGGATGGTGTGGGTTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGACGGTGGCAGGTCTGTGCAGGGTGCTTTTGGAAAAGGTGCACTAATGGTCTTTGGTTTGACCACTTATACATTGCTAGGGCTGGGAGTGCTTGGTGGACCTCTTTCACTTGCTTGGGGATTTTTTGTCATATTTTCGCAGAGATCACCGGAGAAACCATGCTTAAATGACGTGACAGAAGTTGGAACATGGAGACAGACATTTGTGGGGGTTGCTATTTTTCTTGCTGTCTTGACTCTTCTTCCTGTTTGGGATGAGCTTGCAGAGGAACTGGGCATAGGTCTTGTAACCACATTTTAG

>MsG0780040214.01.T01

ATGGGAACTTTAACAAATTGCACTTTACTCCCTCTAAACTCAGAGTTCCGGTTCAAACCGGTTCACTGTTCCTTCAGGAACAAAATCCACTACAACCACCGTTTCAATTCACATGTATCCAAATGGGGAAAGTTGAAGCACGTTGATTTCGATAGGTTTAAGTGTTTTTCAATCAATAACAAAGACGGGGTTGATGATGAAGGTGAAAATGGTAACAAGAATGATTCTAAATCCAATGTAACAACAGTGTTGCCTGATGAAGATAGAGGCTTTAATCCTGATAAATCAACAACCCCTTCCACTTCTCAAAGGTCATCTTTGTCCTCACTTGGATCTGTGTACAACAATTTTCAAGTTGATTCTTTCAAACTCATGGAACTCCTTGGACCTGAGAAGGTTGATCCTGCTGATGTAAAGAAAATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTGACCAAAGAGGAGCCTTTTGGCGAACTGGGAGAAGGCGTTCTTTTCATCGGAAATTTAAGGGGAAAGAGAGAGGACGTTTTTTCCATACTCCAAAATCGGCTAGTTGAGGCCACTGGCGATAAGTACAACCTTTTTATGGTAGAGGAACCTGATTCAGACAGTCCTGATCCACGGGGTGGGCCACGTGTTAGCTTTGGTTTGCTGCGTAAGGAGGTTTCCGAGCCAGAAGAAACAACACTTTGGCAATATGTCGTTGCATCTCTGTTGTTTCTTCTCACTATTGGTACCTCGGTGGAGGTAGGAATTGCATCTCAGATCAACAGACTCCCCCCAGAACTAGTGAAATTCTTGACAGATCCTAACTATACTGAAGCCCCAGATATGGAGATGCTATATCCATTTGTTGAGTCAGCGTTACCTCTAGCATATGGTGTCTTGGGAGTTCTTCTATTTCATGAGGTTGGACACTTTTTAGCTGCATTTCCCAAACAAGTAAAATTAAGCATTCCTTTCTTCATTCCCCATATCACTCTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCTATCCTTCCTGATAGAAGTACTCAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTGCTATCATTTTCGATGTTTGCTGTTGGCCTTCTTCTTTCATCAAATCCAGATGTAGCTGGAGATTTGGTGCAAGTTCCTAGCATGTTGTTTCAAGGTTCTTTGCTACTTGGTTTAATCAGTAGAGCAACTCTTGGTTATGCAGCGGTTCATGCTGCAACAGTTCCAATTCACCCTCTCGTGATTGCAGGATGGTGTGGGTTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGACGGTGGCAGGTCTGTGCAGGGTGCTTTTGGAAAAGGTGCACTAATGGTCTTTGGTTTGACCACTTATACATTGCTAGGGCTGGGAGTGCTTGGTGGACCTCTTTCACTTGCTTGGGGATTTTTTGTCATATTTTCGCAGAGATCACCGGAGAAACCATGCTTAAATGACGTGACAGAAGTTGGAACATGGAGACAGACATTTGTGGGGGTTGCTATTTTTCTTGCTGTCTTGACTCTTCTTCCTGTTTGGGATGAGCTTGCAGAGGAACTGGGCATAGGTCTTGTAACCACATTTTAG

Protein sequence

>MsG0780040214.01.T02

MGTLTNCTLLPLNSEFRFKPVHCSFRNKIHYNHRFNSHVSKWGKLKHVDFDRFKCFSINNKDGVDDEGENGNKNDSKSNVTTVLPDEDRGFNPDKSTTPSTSQRSSLSSLGSVYNNFQVDSFKLMELLGPEKVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGVLFIGNLRGKREDVFSILQNRLVEATGDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGTSVEVGIASQINRLPPELVKFLTDPNYTEAPDMEMLYPFVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGAVLSFSMFAVGLLLSSNPDVAGDLVQVPSMLFQGSLLLGLISRATLGYAAVHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSVQGAFGKGALMVFGLTTYTLLGLGVLGGPLSLAWGFFVIFSQRSPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELAEELGIGLVTTF*

>MsG0780040214.01.T01

MGTLTNCTLLPLNSEFRFKPVHCSFRNKIHYNHRFNSHVSKWGKLKHVDFDRFKCFSINNKDGVDDEGENGNKNDSKSNVTTVLPDEDRGFNPDKSTTPSTSQRSSLSSLGSVYNNFQVDSFKLMELLGPEKVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGVLFIGNLRGKREDVFSILQNRLVEATGDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGTSVEVGIASQINRLPPELVKFLTDPNYTEAPDMEMLYPFVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGAVLSFSMFAVGLLLSSNPDVAGDLVQVPSMLFQGSLLLGLISRATLGYAAVHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSVQGAFGKGALMVFGLTTYTLLGLGVLGGPLSLAWGFFVIFSQRSPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELAEELGIGLVTTF*