AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040236.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040236.01.T01 MTR_7g086430 98.708 542 7 0 1 542 1 542 0.0 1090
MsG0780040236.01.T01 MTR_7g086430 98.301 412 7 0 1 412 1 412 0.0 825
MsG0780040236.01.T01 MTR_5g082260 30.368 517 295 14 10 503 5 479 4.07e-53 188
MsG0780040236.01.T01 MTR_4g010130 28.352 455 270 16 93 525 125 545 1.15e-27 117
MsG0780040236.01.T02 MTR_7g086430 98.708 542 7 0 1 542 1 542 0.0 1090
MsG0780040236.01.T02 MTR_7g086430 98.301 412 7 0 1 412 1 412 0.0 825
MsG0780040236.01.T02 MTR_5g082260 30.368 517 295 14 10 503 5 479 4.07e-53 188
MsG0780040236.01.T02 MTR_4g010130 28.352 455 270 16 93 525 125 545 1.15e-27 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040236.01.T01 AT5G35220 68.561 563 141 8 1 542 1 548 0.0 753
MsG0780040236.01.T01 AT5G35210 89.431 123 13 0 329 451 1543 1665 3.77e-63 224
MsG0780040236.01.T01 AT5G05740 28.037 535 339 12 2 525 13 512 5.35e-47 172
MsG0780040236.01.T01 AT5G05740 27.820 532 341 12 2 525 13 509 3.21e-46 170
MsG0780040236.01.T01 AT5G05740 32.383 386 229 8 141 525 187 541 1.63e-43 163
MsG0780040236.01.T01 AT1G17870 28.731 449 276 13 93 525 132 552 1.02e-30 126
MsG0780040236.01.T02 AT5G35220 68.561 563 141 8 1 542 1 548 0.0 753
MsG0780040236.01.T02 AT5G35210 89.431 123 13 0 329 451 1543 1665 3.77e-63 224
MsG0780040236.01.T02 AT5G05740 28.037 535 339 12 2 525 13 512 5.35e-47 172
MsG0780040236.01.T02 AT5G05740 27.820 532 341 12 2 525 13 509 3.21e-46 170
MsG0780040236.01.T02 AT5G05740 32.383 386 229 8 141 525 187 541 1.63e-43 163
MsG0780040236.01.T02 AT1G17870 28.731 449 276 13 93 525 132 552 1.02e-30 126

Find 24 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTGCTCATTATAAATA+TGG 0.190155 7:+74746527 None:intergenic
CTACAACCTTTCTAAATAAA+TGG 0.216107 7:+74746386 None:intergenic
TCTTGACTCTTCTTCCTGTT+TGG 0.224026 7:-74746624 MsG0780040236.01.T01:CDS
CTTGACTCTTCTTCCTGTTT+GGG 0.253391 7:-74746623 MsG0780040236.01.T01:CDS
GGATGAGCTTGCAGAGGAAC+TGG 0.328392 7:-74746602 MsG0780040236.01.T01:CDS
AATTGAATTAACCTTTCCTT+TGG 0.375547 7:+74746480 None:intergenic
TATGGGCCATTTATTTAGAA+AGG 0.416868 7:-74746392 MsG0780040236.01.T01:intron
AGCAGTGAAATGAAATATAT+AGG 0.433869 7:-74746513 MsG0780040236.01.T01:three_prime_UTR
TCATTTAAGCATGGTTTCTC+CGG 0.439754 7:+74746706 None:intergenic
TCTGCAAGCTCATCCCAAAC+AGG 0.459412 7:+74746610 None:intergenic
ACATGGAGACAGACATTTGT+GGG 0.464417 7:-74746667 MsG0780040236.01.T01:CDS
TTAAATGACGTGACAGAAGT+TGG 0.539625 7:-74746691 MsG0780040236.01.T01:CDS
CATAATGTTCGTGTTAACAA+TGG 0.544081 7:+74746434 None:intergenic
AACATGGAGACAGACATTTG+TGG 0.544900 7:-74746668 MsG0780040236.01.T01:CDS
CTTGCAGAGGAACTGGGCAT+AGG 0.570390 7:-74746595 MsG0780040236.01.T01:CDS
GAAAATCATTACCAAAGGAA+AGG 0.581591 7:-74746491 MsG0780040236.01.T01:three_prime_UTR
TCTGTCACGTCATTTAAGCA+TGG 0.582580 7:+74746697 None:intergenic
ACGTGACAGAAGTTGGAACA+TGG 0.597819 7:-74746684 MsG0780040236.01.T01:CDS
GATGAGCTTGCAGAGGAACT+GGG 0.604398 7:-74746601 MsG0780040236.01.T01:CDS
TATAGGAAAATCATTACCAA+AGG 0.607998 7:-74746496 MsG0780040236.01.T01:three_prime_UTR
TGTTTGGGATGAGCTTGCAG+AGG 0.630439 7:-74746608 MsG0780040236.01.T01:CDS
CATGGAGACAGACATTTGTG+GGG 0.635920 7:-74746666 MsG0780040236.01.T01:CDS
TAACCATTAAAACTAAAATG+TGG 0.650160 7:+74746564 None:intergenic
ATGGAGACAGACATTTGTGG+GGG 0.683523 7:-74746665 MsG0780040236.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTCATTATTCAATATT+AGG - Chr7:74750241-74750260 MsG0780040236.01.T01:intron 10.0%
!! ATTGAATCTATTTAATATTT+AGG + Chr7:74747418-74747437 None:intergenic 10.0%
!!! ACAATTTTATTTTTATTTAC+AGG - Chr7:74750267-74750286 MsG0780040236.01.T01:intron 10.0%
!! AACAATAAAATATTTAGACA+CGG + Chr7:74748415-74748434 None:intergenic 15.0%
!! TAATTTCATATGTATAAAAG+TGG + Chr7:74749103-74749122 None:intergenic 15.0%
!! TATTAAATAGATTCAATACT+TGG - Chr7:74747421-74747440 MsG0780040236.01.T01:intron 15.0%
!!! AGATATATATAGCTTTTTAT+TGG - Chr7:74750575-74750594 MsG0780040236.01.T01:intron 15.0%
!!! CGACTTTATTTTATTAATTT+AGG - Chr7:74749915-74749934 MsG0780040236.01.T01:CDS 15.0%
!!! TTTTGTTAACTAACTTTTAA+TGG - Chr7:74747651-74747670 MsG0780040236.01.T01:intron 15.0%
!!! TTTTTGAAATTACATAAGTT+AGG + Chr7:74748952-74748971 None:intergenic 15.0%
!! AAAGTACATTATGTTTAAGA+AGG + Chr7:74750177-74750196 None:intergenic 20.0%
!! CATGTAATGAAACAAAAATT+AGG + Chr7:74750833-74750852 None:intergenic 20.0%
!! GCATTTAGTATTTACTAATA+TGG - Chr7:74750670-74750689 MsG0780040236.01.T01:intron 20.0%
!! GTAAAGAAAAAGAATACTAT+GGG - Chr7:74751622-74751641 MsG0780040236.01.T01:five_prime_UTR 20.0%
!! TAACCATTAAAACTAAAATG+TGG + Chr7:74751470-74751489 None:intergenic 20.0%
!! TACATTATATTTATACCTGA+TGG - Chr7:74749310-74749329 MsG0780040236.01.T01:intron 20.0%
!! TACTAAAATACATAAACAGA+CGG + Chr7:74749586-74749605 None:intergenic 20.0%
!! TGTAAAGAAAAAGAATACTA+TGG - Chr7:74751621-74751640 MsG0780040236.01.T01:five_prime_UTR 20.0%
!!! AAAATTAAGGATAAGCTTTT+TGG - Chr7:74747932-74747951 MsG0780040236.01.T01:intron 20.0%
!!! AAATTAGATTTTACGCTAAA+AGG - Chr7:74749117-74749136 MsG0780040236.01.T01:intron 20.0%
!!! AAATTATATTCTAGAAAGGA+AGG + Chr7:74749870-74749889 None:intergenic 20.0%
!!! AATGCTTAATTTTACTTGTT+TGG + Chr7:74749380-74749399 None:intergenic 20.0%
!!! AATGTTGATTCTTTGATATA+TGG - Chr7:74746910-74746929 MsG0780040236.01.T01:intron 20.0%
!!! ATGCTTAATTTTACTTGTTT+GGG + Chr7:74749379-74749398 None:intergenic 20.0%
!!! GGTAAAATTATATTCTAGAA+AGG + Chr7:74749874-74749893 None:intergenic 20.0%
!!! TAACCACATTTTAGTTTTAA+TGG - Chr7:74751464-74751483 MsG0780040236.01.T01:CDS 20.0%
!!! TAATTTTGACTGTATGAAAT+GGG - Chr7:74750551-74750570 MsG0780040236.01.T01:intron 20.0%
!!! TCATTCTATTTTGGTTTTTA+TGG - Chr7:74747619-74747638 MsG0780040236.01.T01:intron 20.0%
!!! TTATTTTTATTTACAGGTGT+GGG - Chr7:74750273-74750292 MsG0780040236.01.T01:intron 20.0%
!!! TTTATTTTTATTTACAGGTG+TGG - Chr7:74750272-74750291 MsG0780040236.01.T01:intron 20.0%
!!! TTTTCAATCAATAACAAAGA+CGG - Chr7:74746674-74746693 MsG0780040236.01.T01:CDS 20.0%
! AAATATTCTCATTCATGAGT+TGG - Chr7:74750758-74750777 MsG0780040236.01.T01:intron 25.0%
! AATTGAATTAACCTTTCCTT+TGG + Chr7:74751554-74751573 None:intergenic 25.0%
! AGCAGTGAAATGAAATATAT+AGG - Chr7:74751518-74751537 MsG0780040236.01.T01:CDS 25.0%
! ATATTTACTTGTCATACAGA+AGG - Chr7:74750386-74750405 MsG0780040236.01.T01:intron 25.0%
! ATCAATACTATTTGAACATC+AGG - Chr7:74748300-74748319 MsG0780040236.01.T01:CDS 25.0%
! ATTTAGGTAAAATACTCTAG+TGG - Chr7:74749931-74749950 MsG0780040236.01.T01:CDS 25.0%
! ATTTCTCCATTGAAGAAAAA+TGG - Chr7:74746490-74746509 MsG0780040236.01.T01:three_prime_UTR 25.0%
! CATGAATGAGAATATTTATG+TGG + Chr7:74750755-74750774 None:intergenic 25.0%
! CCAATTGGTTACTATTAAAT+TGG - Chr7:74750452-74750471 MsG0780040236.01.T01:intron 25.0%
! CCAATTTAATAGTAACCAAT+TGG + Chr7:74750455-74750474 None:intergenic 25.0%
! CTACAACCTTTCTAAATAAA+TGG + Chr7:74751648-74751667 None:intergenic 25.0%
! CTATTATACAATGTCTCATT+AGG - Chr7:74748979-74748998 MsG0780040236.01.T01:intron 25.0%
! GAAAACTACACAAATAAGAT+AGG + Chr7:74749225-74749244 None:intergenic 25.0%
! GATAAGTAGAAACAATTGAT+CGG - Chr7:74750714-74750733 MsG0780040236.01.T01:intron 25.0%
! GATTGTCCTATTTCAAATTT+CGG - Chr7:74750428-74750447 MsG0780040236.01.T01:intron 25.0%
! TAAGTTAGGTAAAAGAGATA+AGG + Chr7:74748938-74748957 None:intergenic 25.0%
! TATAGGAAAATCATTACCAA+AGG - Chr7:74751535-74751554 MsG0780040236.01.T01:intron 25.0%
! TGAGACATTGTATAATAGTA+TGG + Chr7:74748977-74748996 None:intergenic 25.0%
! TGCTGATGTAAAGAAAATTA+AGG - Chr7:74747919-74747938 MsG0780040236.01.T01:CDS 25.0%
! TTCACTGCTCATTATAAATA+TGG + Chr7:74751507-74751526 None:intergenic 25.0%
! TTTCTCCATTGAAGAAAAAT+GGG - Chr7:74746491-74746510 MsG0780040236.01.T01:three_prime_UTR 25.0%
!! AGTATGCATACTTTATGTTT+TGG - Chr7:74750049-74750068 MsG0780040236.01.T01:CDS 25.0%
!! ATATTTATACCTGATGGATA+TGG - Chr7:74749316-74749335 MsG0780040236.01.T01:intron 25.0%
!! TCTTTTCATCGGAAATTTAA+GGG - Chr7:74748012-74748031 MsG0780040236.01.T01:intron 25.0%
!! TGCTTTGAATTTCACAATTA+AGG + Chr7:74750625-74750644 None:intergenic 25.0%
!! TGTTGTCTATCATTCTATTT+TGG - Chr7:74747610-74747629 MsG0780040236.01.T01:intron 25.0%
!! TTAATTTTCTTTACATCAGC+AGG + Chr7:74747920-74747939 None:intergenic 25.0%
!! TTCTTTTCATCGGAAATTTA+AGG - Chr7:74748011-74748030 MsG0780040236.01.T01:intron 25.0%
!!! AAACTTAACTGTTTTAAGCT+GGG + Chr7:74748802-74748821 None:intergenic 25.0%
!!! ATTTTTTGTCATATTTTCGC+AGG - Chr7:74751214-74751233 MsG0780040236.01.T01:intron 25.0%
!!! CTAATTTTGACTGTATGAAA+TGG - Chr7:74750550-74750569 MsG0780040236.01.T01:intron 25.0%
!!! GTATTTTAGTATGCATCTAA+AGG - Chr7:74749595-74749614 MsG0780040236.01.T01:intron 25.0%
!!! GTCAGATATATTTTTTTCAC+CGG - Chr7:74751676-74751695 MsG0780040236.01.T01:five_prime_UTR 25.0%
!!! TTTTGGTTATTCAACCTTTT+GGG - Chr7:74747949-74747968 MsG0780040236.01.T01:intron 25.0%
!!! TTTTTGGTTATTCAACCTTT+TGG - Chr7:74747948-74747967 MsG0780040236.01.T01:intron 25.0%
!!! TTTTTTCCATACTCCAAAAT+CGG - Chr7:74748050-74748069 MsG0780040236.01.T01:intron 25.0%
AAGCATGTTAAAAGCTTGTA+TGG + Chr7:74750303-74750322 None:intergenic 30.0%
AAGCTGTTGAAAAGAGAAAA+GGG + Chr7:74751168-74751187 None:intergenic 30.0%
AGTTTAACCATAGCATGAAT+TGG - Chr7:74750999-74751018 MsG0780040236.01.T01:intron 30.0%
ATAAGCTTTCTATGACTGTT+TGG + Chr7:74747125-74747144 None:intergenic 30.0%
ATTTCAAATTTCGGACCAAT+TGG - Chr7:74750437-74750456 MsG0780040236.01.T01:intron 30.0%
CAACATAGTGACATGAATAT+CGG + Chr7:74749015-74749034 None:intergenic 30.0%
CAATTCACATGTATCCAAAT+GGG - Chr7:74746613-74746632 MsG0780040236.01.T01:CDS 30.0%
CATAATGTTCGTGTTAACAA+TGG + Chr7:74751600-74751619 None:intergenic 30.0%
CTAACTATAGTATACACGTT+TGG + Chr7:74747178-74747197 None:intergenic 30.0%
CTGAAAAATAACCAAAAGAC+TGG + Chr7:74751071-74751090 None:intergenic 30.0%
CTTTGATATATGGCTCTTAT+TGG - Chr7:74746920-74746939 MsG0780040236.01.T01:intron 30.0%
GAAAATCATTACCAAAGGAA+AGG - Chr7:74751540-74751559 MsG0780040236.01.T01:intron 30.0%
GAAGCAAAAAGAAAAGTTGA+TGG + Chr7:74749277-74749296 None:intergenic 30.0%
GATCTGATGAATCAAAAACA+TGG + Chr7:74748439-74748458 None:intergenic 30.0%
GGTAAGTCTAATATTTGCTT+AGG - Chr7:74750930-74750949 MsG0780040236.01.T01:intron 30.0%
GTCAAAAGTTTCAGTTAGTT+TGG - Chr7:74749066-74749085 MsG0780040236.01.T01:intron 30.0%
TAAGCTTTCTATGACTGTTT+GGG + Chr7:74747124-74747143 None:intergenic 30.0%
TATAGTATACACGTTTGGAT+TGG + Chr7:74747173-74747192 None:intergenic 30.0%
TATGGGCCATTTATTTAGAA+AGG - Chr7:74751639-74751658 MsG0780040236.01.T01:five_prime_UTR 30.0%
TCAATTCACATGTATCCAAA+TGG - Chr7:74746612-74746631 MsG0780040236.01.T01:CDS 30.0%
TGGATACATGTGAATTGAAA+CGG + Chr7:74746610-74746629 None:intergenic 30.0%
TTTCATTACATGTTCTTGCA+GGG - Chr7:74750841-74750860 MsG0780040236.01.T01:intron 30.0%
TTTCCTGTATCACAAAAAAC+TGG - Chr7:74748673-74748692 MsG0780040236.01.T01:CDS 30.0%
! AGTTGATTCTTTCAAACTCA+TGG - Chr7:74747868-74747887 MsG0780040236.01.T01:intron 30.0%
! ATATTCTAGAAAGGAAGGAA+GGG + Chr7:74749865-74749884 None:intergenic 30.0%
! ATTGGTCCGAAATTTGAAAT+AGG + Chr7:74750437-74750456 None:intergenic 30.0%
! CAAAACACTTGCATAGTTTT+TGG + Chr7:74747526-74747545 None:intergenic 30.0%
! CGATAAGTACAACCTTTTTA+TGG - Chr7:74748090-74748109 MsG0780040236.01.T01:intron 30.0%
! CTTTTCATCGGAAATTTAAG+GGG - Chr7:74748013-74748032 MsG0780040236.01.T01:intron 30.0%
! GTTTGTGAAATTTTGTACTG+CGG + Chr7:74747299-74747318 None:intergenic 30.0%
! TATATTCTAGAAAGGAAGGA+AGG + Chr7:74749866-74749885 None:intergenic 30.0%
! TATGTTGATTGACTCACTAT+TGG - Chr7:74749028-74749047 MsG0780040236.01.T01:intron 30.0%
! TCAAGAATTTCACTAGTTCT+GGG + Chr7:74748473-74748492 None:intergenic 30.0%
! TGTAACTATTACCAGTCTTT+TGG - Chr7:74751057-74751076 MsG0780040236.01.T01:intron 30.0%
! TTTTAAGCTGGGTAAAAAGT+AGG + Chr7:74748791-74748810 None:intergenic 30.0%
!! AAGTTCCCATTTTTCTTCAA+TGG + Chr7:74746499-74746518 None:intergenic 30.0%
!! CAAACTTAACTGTTTTAAGC+TGG + Chr7:74748803-74748822 None:intergenic 30.0%
!!! AACAATGGTTTTATCACAAG+CGG + Chr7:74751585-74751604 None:intergenic 30.0%
!!! AATCCAGTTTTTTGTGATAC+AGG + Chr7:74748679-74748698 None:intergenic 30.0%
!!! AGATATATTTTTTTCACCGG+TGG - Chr7:74751679-74751698 MsG0780040236.01.T01:five_prime_UTR 30.0%
!!! CAGTTTTTTACACAATTCCA+TGG - Chr7:74749249-74749268 MsG0780040236.01.T01:intron 30.0%
!!! GGGTTTTTTTTTAACACATG+AGG + Chr7:74747720-74747739 None:intergenic 30.0%
AAAGGAATAAAACGACGTTG+CGG + Chr7:74746460-74746479 None:intergenic 35.0%
AAATTTAAGGGGAAAGAGAG+AGG - Chr7:74748024-74748043 MsG0780040236.01.T01:intron 35.0%
AGAGAGAAATCCTCTTTGTT+TGG - Chr7:74747382-74747401 MsG0780040236.01.T01:intron 35.0%
AGCTGTTGAAAAGAGAAAAG+GGG + Chr7:74751167-74751186 None:intergenic 35.0%
AGGTAAAAGAGATAAGGAAG+AGG + Chr7:74748932-74748951 None:intergenic 35.0%
AGTAGAAACAATTGATCGGT+AGG - Chr7:74750718-74750737 MsG0780040236.01.T01:intron 35.0%
ATACATGTGAATTGAAACGG+TGG + Chr7:74746607-74746626 None:intergenic 35.0%
ATATAGCATCTCCATATCTG+GGG + Chr7:74748517-74748536 None:intergenic 35.0%
ATATCTGCTAAGCTTCTTTG+TGG + Chr7:74747580-74747599 None:intergenic 35.0%
CAAAACATAGTCTATGACTC+CGG - Chr7:74748706-74748725 MsG0780040236.01.T01:intron 35.0%
CAAACGCACACAAAAAAGAA+CGG + Chr7:74748617-74748636 None:intergenic 35.0%
CAACAGAAACATTGATCTGT+GGG + Chr7:74747740-74747759 None:intergenic 35.0%
CAAGCTGTTGAAAAGAGAAA+AGG + Chr7:74751169-74751188 None:intergenic 35.0%
CATAGCAATTGTAGTGTAGT+GGG - Chr7:74747336-74747355 MsG0780040236.01.T01:intron 35.0%
CCAAATATCACCAAACAAAG+AGG + Chr7:74747395-74747414 None:intergenic 35.0%
CTATAGTTAGAAACTGCTAC+AGG - Chr7:74747188-74747207 MsG0780040236.01.T01:intron 35.0%
CTGGATTTGATGAAAGAAGA+AGG + Chr7:74749745-74749764 None:intergenic 35.0%
GATATAGCATCTCCATATCT+GGG + Chr7:74748518-74748537 None:intergenic 35.0%
GGAGAAATGAAGAAGATGAA+AGG + Chr7:74746478-74746497 None:intergenic 35.0%
GTCAAGAATTTCACTAGTTC+TGG + Chr7:74748474-74748493 None:intergenic 35.0%
GTGCAGTAAAATCTAAACAC+CGG + Chr7:74748728-74748747 None:intergenic 35.0%
GTGTTAAGAACCACAGATTT+GGG + Chr7:74750216-74750235 None:intergenic 35.0%
GTTTCATTACATGTTCTTGC+AGG - Chr7:74750840-74750859 MsG0780040236.01.T01:intron 35.0%
TAAAATAAAGTCGCAAGCAC+TGG + Chr7:74749908-74749927 None:intergenic 35.0%
TAAGCTTCTTTGTGGTAGAA+GGG + Chr7:74747572-74747591 None:intergenic 35.0%
TCAAGTAGACATATCACTTG+CGG - Chr7:74749673-74749692 MsG0780040236.01.T01:intron 35.0%
TCATTTAAGCATGGTTTCTC+CGG + Chr7:74751328-74751347 None:intergenic 35.0%
TCTACTTGAGTACTTCTATC+AGG + Chr7:74749662-74749681 None:intergenic 35.0%
TGACCACTTATACATTGCTA+GGG - Chr7:74750899-74750918 MsG0780040236.01.T01:intron 35.0%
TGCAATCATGTCATATCACT+TGG + Chr7:74749994-74750013 None:intergenic 35.0%
TGTGTTAAGAACCACAGATT+TGG + Chr7:74750217-74750236 None:intergenic 35.0%
TGTTAAGAACCACAGATTTG+GGG + Chr7:74750215-74750234 None:intergenic 35.0%
TTAAAGCCTCTATCTTCATC+AGG + Chr7:74746764-74746783 None:intergenic 35.0%
TTAAATGACGTGACAGAAGT+TGG - Chr7:74751340-74751359 MsG0780040236.01.T01:CDS 35.0%
TTAATCAGTAGAGCAACTCT+TGG - Chr7:74749827-74749846 MsG0780040236.01.T01:CDS 35.0%
TTACTGCTGATGGTTCAATT+TGG + Chr7:74749556-74749575 None:intergenic 35.0%
TTAGTCTACCTAGTGTTTAG+TGG - Chr7:74747236-74747255 MsG0780040236.01.T01:intron 35.0%
TTGACCACTTATACATTGCT+AGG - Chr7:74750898-74750917 MsG0780040236.01.T01:intron 35.0%
TTTCAAGGTTCTTTGCTACT+TGG - Chr7:74749803-74749822 MsG0780040236.01.T01:CDS 35.0%
! ATGATTGCAGCACATCATTT+TGG - Chr7:74750005-74750024 MsG0780040236.01.T01:CDS 35.0%
! CCTCTTTGTTTGGTGATATT+TGG - Chr7:74747392-74747411 MsG0780040236.01.T01:intron 35.0%
! CTTTTCTCTTTTCAACAGCT+TGG - Chr7:74751167-74751186 MsG0780040236.01.T01:intron 35.0%
! GTACAACCTTTTTATGGTAG+AGG - Chr7:74748096-74748115 MsG0780040236.01.T01:intron 35.0%
! TCTTGTGTTCTTTTCTTGCT+TGG - Chr7:74746847-74746866 MsG0780040236.01.T01:CDS 35.0%
! TGATTGCAGCACATCATTTT+GGG - Chr7:74750006-74750025 MsG0780040236.01.T01:CDS 35.0%
!! AAGAAAAGTTGATGGAACCA+TGG + Chr7:74749269-74749288 None:intergenic 35.0%
!! AAGAATTTCACTAGTTCTGG+GGG + Chr7:74748471-74748490 None:intergenic 35.0%
!! CAAGAATTTCACTAGTTCTG+GGG + Chr7:74748472-74748491 None:intergenic 35.0%
!! CAAGCACTGGATCTATATTT+AGG + Chr7:74749895-74749914 None:intergenic 35.0%
!! CTGTTGTTTCTTCTCACTAT+TGG - Chr7:74748235-74748254 MsG0780040236.01.T01:CDS 35.0%
!! TTTTGGAAAAGGTGCACTAA+TGG - Chr7:74750867-74750886 MsG0780040236.01.T01:intron 35.0%
!!! ACACTTGCATAGTTTTTGGT+TGG + Chr7:74747522-74747541 None:intergenic 35.0%
!!! AGTTTTTGGTTGGGAACAAA+TGG + Chr7:74747512-74747531 None:intergenic 35.0%
!!! CACTTGCATAGTTTTTGGTT+GGG + Chr7:74747521-74747540 None:intergenic 35.0%
!!! TCATTTTCGATGTTTGCTGT+TGG - Chr7:74749719-74749738 MsG0780040236.01.T01:intron 35.0%
AAAATGTACCCGTTGAGAAG+TGG + Chr7:74746810-74746829 None:intergenic 40.0%
AAAGCTGCCAAGAGTGATAT+GGG + Chr7:74749416-74749435 None:intergenic 40.0%
AACATGGAGACAGACATTTG+TGG - Chr7:74751363-74751382 MsG0780040236.01.T01:CDS 40.0%
AATCTGCAATCCAGCACATA+TGG + Chr7:74749164-74749183 None:intergenic 40.0%
AATTGAAACGGTGGTTGTAG+TGG + Chr7:74746598-74746617 None:intergenic 40.0%
ACATGGAGACAGACATTTGT+GGG - Chr7:74751364-74751383 MsG0780040236.01.T01:CDS 40.0%
ACTTATACATTGCTAGGGCT+GGG - Chr7:74750904-74750923 MsG0780040236.01.T01:intron 40.0%
AGACTCAATGCAAAAGTGAC+TGG + Chr7:74749477-74749496 None:intergenic 40.0%
AGCCAGAAGAAACAACACTT+TGG - Chr7:74748194-74748213 MsG0780040236.01.T01:intron 40.0%
AGGTAACACTGTGGTTACAT+TGG + Chr7:74746744-74746763 None:intergenic 40.0%
ATCTTCATCAGGTAACACTG+TGG + Chr7:74746753-74746772 None:intergenic 40.0%
ATGGGTTTGACACCATAACA+CGG + Chr7:74746428-74746447 None:intergenic 40.0%
ATTAGAAGTTGTCCATCCGT+GGG + Chr7:74747694-74747713 None:intergenic 40.0%
CAAATCAATCCCCAAATCTG+TGG - Chr7:74750203-74750222 MsG0780040236.01.T01:CDS 40.0%
CAAGTAGACATATCACTTGC+GGG - Chr7:74749674-74749693 MsG0780040236.01.T01:intron 40.0%
CACAAGTTTCTTGAAGAAGG+AGG - Chr7:74747445-74747464 MsG0780040236.01.T01:intron 40.0%
CACTTAAGCCACTAAACACT+AGG + Chr7:74747247-74747266 None:intergenic 40.0%
CAGGTTCCTCTACCATAAAA+AGG + Chr7:74748105-74748124 None:intergenic 40.0%
CAGTGTGTCAAAGTTAACTG+CGG + Chr7:74750075-74750094 None:intergenic 40.0%
CATATCACTTGGAAACAGCT+TGG + Chr7:74749983-74750002 None:intergenic 40.0%
CCACTACACTACAATTGCTA+TGG + Chr7:74747338-74747357 None:intergenic 40.0%
CCATAGCAATTGTAGTGTAG+TGG - Chr7:74747335-74747354 MsG0780040236.01.T01:intron 40.0%
CGGTTAAAAGTTACTGCTGA+TGG + Chr7:74749566-74749585 None:intergenic 40.0%
CTAAGCTTCTTTGTGGTAGA+AGG + Chr7:74747573-74747592 None:intergenic 40.0%
CTCCTTCTTCAAGAAACTTG+TGG + Chr7:74747447-74747466 None:intergenic 40.0%
CTTGACTCTTCTTCCTGTTT+GGG - Chr7:74751408-74751427 MsG0780040236.01.T01:CDS 40.0%
CTTGAGTACTTCTATCAGGA+AGG + Chr7:74749658-74749677 None:intergenic 40.0%
GAACCTTGAAACAACATGCT+AGG + Chr7:74749794-74749813 None:intergenic 40.0%
GAATTGCATCTCAGGTATGT+TGG - Chr7:74748275-74748294 MsG0780040236.01.T01:CDS 40.0%
GCAACAGAAACATTGATCTG+TGG + Chr7:74747741-74747760 None:intergenic 40.0%
GCTCTAACCAATTCATGCTA+TGG + Chr7:74751009-74751028 None:intergenic 40.0%
GGATATAGCATCTCCATATC+TGG + Chr7:74748519-74748538 None:intergenic 40.0%
GGGAGAGATTTGAATGAAGA+AGG - Chr7:74747356-74747375 MsG0780040236.01.T01:intron 40.0%
GTGATATGGGGAATGAAGAA+AGG + Chr7:74749403-74749422 None:intergenic 40.0%
GTGTTACCTGATGAAGATAG+AGG - Chr7:74746755-74746774 MsG0780040236.01.T01:intron 40.0%
GTTTAGTGGCTTAAGTGTAG+CGG - Chr7:74747250-74747269 MsG0780040236.01.T01:intron 40.0%
TAAGGAAGAGGATAGAGACT+CGG + Chr7:74748920-74748939 None:intergenic 40.0%
TCATCAAATCCAGATGTAGC+TGG - Chr7:74749752-74749771 MsG0780040236.01.T01:intron 40.0%
TCTGTCACGTCATTTAAGCA+TGG + Chr7:74751337-74751356 None:intergenic 40.0%
TCTTCTCACTATTGGTACCT+CGG - Chr7:74748243-74748262 MsG0780040236.01.T01:CDS 40.0%
TCTTGACTCTTCTTCCTGTT+TGG - Chr7:74751407-74751426 MsG0780040236.01.T01:CDS 40.0%
TTAGACACGGCAGAAGAAAA+CGG + Chr7:74748402-74748421 None:intergenic 40.0%
TTCAAACTCATGGAACTCCT+TGG - Chr7:74747878-74747897 MsG0780040236.01.T01:intron 40.0%
TTCATTCCCCATATCACTCT+TGG - Chr7:74749406-74749425 MsG0780040236.01.T01:intron 40.0%
TTGACACCATAACACGGAAA+TGG + Chr7:74746422-74746441 None:intergenic 40.0%
TTGGGAACAAATGGAGAAGA+GGG + Chr7:74747503-74747522 None:intergenic 40.0%
! AAAGGTGCACTAATGGTCTT+TGG - Chr7:74750874-74750893 MsG0780040236.01.T01:intron 40.0%
! AGCTTTTAACATGCTTCCAG+TGG - Chr7:74750307-74750326 MsG0780040236.01.T01:intron 40.0%
! CTTTTAACATGCTTCCAGTG+GGG - Chr7:74750309-74750328 MsG0780040236.01.T01:intron 40.0%
! GATGTTTTGTCAGAGATCAC+CGG - Chr7:74751306-74751325 MsG0780040236.01.T01:CDS 40.0%
! GCTTTTAACATGCTTCCAGT+GGG - Chr7:74750308-74750327 MsG0780040236.01.T01:intron 40.0%
! TCAGCTTCTGTTGGTTGTTT+GGG + Chr7:74746370-74746389 None:intergenic 40.0%
! TGTGTTCTTTTCTTGCTTGG+TGG - Chr7:74746850-74746869 MsG0780040236.01.T01:intron 40.0%
! TTCTCTTTTCAACAGCTTGG+TGG - Chr7:74751170-74751189 MsG0780040236.01.T01:intron 40.0%
!! AAAGACGGTGTTGATGATGA+AGG - Chr7:74746689-74746708 MsG0780040236.01.T01:CDS 40.0%
!! AAGACGGTGTTGATGATGAA+GGG - Chr7:74746690-74746709 MsG0780040236.01.T01:CDS 40.0%
!! AAGTGTTGTTTCTTCTGGCT+CGG + Chr7:74748194-74748213 None:intergenic 40.0%
!! AGAATTTCACTAGTTCTGGG+GGG + Chr7:74748470-74748489 None:intergenic 40.0%
!! GTTCCTAGCATGTTGTTTCA+AGG - Chr7:74749788-74749807 MsG0780040236.01.T01:CDS 40.0%
!! GTTGATGATGAAGGGGAAAA+TGG - Chr7:74746698-74746717 MsG0780040236.01.T01:CDS 40.0%
!! TGAAGCACGTTGATTTCGAT+AGG - Chr7:74746642-74746661 MsG0780040236.01.T01:CDS 40.0%
!! TGCCAAAGTGTTGTTTCTTC+TGG + Chr7:74748199-74748218 None:intergenic 40.0%
!!! AACTAGCCGATTTTGGAGTA+TGG + Chr7:74748059-74748078 None:intergenic 40.0%
!!! GTAGTGGATTTTGTTCCTGA+AGG + Chr7:74746582-74746601 None:intergenic 40.0%
AACCGGAACTCTGAGTTTAG+AGG + Chr7:74746542-74746561 None:intergenic 45.0%
AACTACACAACACACAGCCA+TGG + Chr7:74749626-74749645 None:intergenic 45.0%
AAGCTGCCAAGAGTGATATG+GGG + Chr7:74749415-74749434 None:intergenic 45.0%
AAGGTTGTACTTATCGCCAG+TGG + Chr7:74748086-74748105 None:intergenic 45.0%
AATCCCCAAGCAAGTGAAAG+AGG + Chr7:74751197-74751216 None:intergenic 45.0%
ACACTCTTCTCAGCTTCTGT+TGG + Chr7:74746379-74746398 None:intergenic 45.0%
ACCAAATCTCCAGCTACATC+TGG + Chr7:74749764-74749783 None:intergenic 45.0%
ACCATCCTGCAATCACAAGA+GGG + Chr7:74750143-74750162 None:intergenic 45.0%
ACCGGAACTCTGAGTTTAGA+GGG + Chr7:74746541-74746560 None:intergenic 45.0%
ACCTCTAGCATATGGTGTCT+TGG - Chr7:74748557-74748576 MsG0780040236.01.T01:intron 45.0%
ACGTGACAGAAGTTGGAACA+TGG - Chr7:74751347-74751366 MsG0780040236.01.T01:CDS 45.0%
AGCAAACCAAAGCTAACACG+TGG + Chr7:74748157-74748176 None:intergenic 45.0%
ATGGAGACAGACATTTGTGG+GGG - Chr7:74751366-74751385 MsG0780040236.01.T01:CDS 45.0%
ATTCACCCTCTTGTGATTGC+AGG - Chr7:74750135-74750154 MsG0780040236.01.T01:CDS 45.0%
ATTCAGACAGTCCTGATCCA+CGG - Chr7:74748125-74748144 MsG0780040236.01.T01:intron 45.0%
CAAAGCTGCCAAGAGTGATA+TGG + Chr7:74749417-74749436 None:intergenic 45.0%
CACAAACTGTCGTCGAATAG+AGG - Chr7:74747312-74747331 MsG0780040236.01.T01:intron 45.0%
CACTTATACATTGCTAGGGC+TGG - Chr7:74750903-74750922 MsG0780040236.01.T01:intron 45.0%
CAGCCCTAGCAATGTATAAG+TGG + Chr7:74750905-74750924 None:intergenic 45.0%
CAGTCATCTTTGTCCTCACT+TGG - Chr7:74747824-74747843 MsG0780040236.01.T01:intron 45.0%
CATATCACTCTTGGCAGCTT+TGG - Chr7:74749415-74749434 MsG0780040236.01.T01:intron 45.0%
CATGGAGACAGACATTTGTG+GGG - Chr7:74751365-74751384 MsG0780040236.01.T01:CDS 45.0%
CATTAGAAGTTGTCCATCCG+TGG + Chr7:74747695-74747714 None:intergenic 45.0%
CCTCTAGCATATGGTGTCTT+GGG - Chr7:74748558-74748577 MsG0780040236.01.T01:intron 45.0%
CGTGTTCCATTTCCGTGTTA+TGG - Chr7:74746413-74746432 MsG0780040236.01.T01:intron 45.0%
CTATACTGAAGCCCCAGATA+TGG - Chr7:74748503-74748522 MsG0780040236.01.T01:intron 45.0%
CTCTCCTCATGTAATGGTCA+CGG + Chr7:74751031-74751050 None:intergenic 45.0%
CTGCTATTGTATGTGCAGAG+CGG - Chr7:74750092-74750111 MsG0780040236.01.T01:CDS 45.0%
GAAATACCTGCCATATGTGC+TGG - Chr7:74749151-74749170 MsG0780040236.01.T01:intron 45.0%
GCAATCACAAGAGGGTGAAT+TGG + Chr7:74750135-74750154 None:intergenic 45.0%
GGCCACAAGTTTCTTGAAGA+AGG - Chr7:74747442-74747461 MsG0780040236.01.T01:intron 45.0%
GTGACCATTACATGAGGAGA+GGG - Chr7:74751030-74751049 MsG0780040236.01.T01:intron 45.0%
GTGCTTCAACTTTGCCCATT+TGG + Chr7:74746630-74746649 None:intergenic 45.0%
GTTAGAAACTGCTACAGGCT+TGG - Chr7:74747193-74747212 MsG0780040236.01.T01:intron 45.0%
GTTGGGAACAAATGGAGAAG+AGG + Chr7:74747504-74747523 None:intergenic 45.0%
GTTGTACACAGATCCAAGTG+AGG + Chr7:74747840-74747859 None:intergenic 45.0%
TACCATCCTGCAATCACAAG+AGG + Chr7:74750144-74750163 None:intergenic 45.0%
TCAATGCAAAAGTGACTGGC+TGG + Chr7:74749473-74749492 None:intergenic 45.0%
TCAGCGTTACCTCTAGCATA+TGG - Chr7:74748549-74748568 MsG0780040236.01.T01:intron 45.0%
TCCAGATGTAGCTGGAGATT+TGG - Chr7:74749760-74749779 MsG0780040236.01.T01:intron 45.0%
TCCCTCTAAACTCAGAGTTC+CGG - Chr7:74746537-74746556 MsG0780040236.01.T01:three_prime_UTR 45.0%
TGCACATAGCCATATCCATC+AGG + Chr7:74749328-74749347 None:intergenic 45.0%
TGCATCTAAAGGCTGATCCA+TGG - Chr7:74749606-74749625 MsG0780040236.01.T01:intron 45.0%
TGGACCTCTTTCACTTGCTT+GGG - Chr7:74751190-74751209 MsG0780040236.01.T01:intron 45.0%
TGGGAACAAATGGAGAAGAG+GGG + Chr7:74747502-74747521 None:intergenic 45.0%
TTCCTGAAGGAACAGTGAAC+CGG + Chr7:74746569-74746588 None:intergenic 45.0%
! ACTCCAAAATCGGCTAGTTG+AGG - Chr7:74748060-74748079 MsG0780040236.01.T01:intron 45.0%
! CTCAGCTTCTGTTGGTTGTT+TGG + Chr7:74746371-74746390 None:intergenic 45.0%
! CTCTAGTGGATCATTATGCG+TGG - Chr7:74749945-74749964 MsG0780040236.01.T01:CDS 45.0%
! TCTGGGGCTTCAGTATAGTT+AGG + Chr7:74748501-74748520 None:intergenic 45.0%
! TGACCAAAGAGGAGCCTTTT+GGG - Chr7:74747972-74747991 MsG0780040236.01.T01:intron 45.0%
! TGATGGATATGGCTATGTGC+AGG - Chr7:74749327-74749346 MsG0780040236.01.T01:intron 45.0%
!! AACAGTGAACCGGTTTGAAC+CGG + Chr7:74746559-74746578 None:intergenic 45.0%
!! AACCTTTTGGGTGACCAAAG+AGG - Chr7:74747961-74747980 MsG0780040236.01.T01:intron 45.0%
!! AGACGGTGTTGATGATGAAG+GGG - Chr7:74746691-74746710 MsG0780040236.01.T01:CDS 45.0%
!! ATGTTCTTGCAGGGTGCTTT+TGG - Chr7:74750850-74750869 MsG0780040236.01.T01:intron 45.0%
!! CAGCTTTGGTGCTATTACTC+AGG - Chr7:74749429-74749448 MsG0780040236.01.T01:intron 45.0%
!! GGTAACGCTGACTCAACAAA+TGG + Chr7:74748540-74748559 None:intergenic 45.0%
!! TAGCTTTGGTTTGCTGCGTA+AGG - Chr7:74748162-74748181 MsG0780040236.01.T01:intron 45.0%
!! TTGCAGGGTGCTTTTGGAAA+AGG - Chr7:74750856-74750875 MsG0780040236.01.T01:intron 45.0%
!!! GGAGAAGGCGTTCTTTTCAT+CGG - Chr7:74748001-74748020 MsG0780040236.01.T01:intron 45.0%
AAAACGACGTTGCGGTTCAG+AGG + Chr7:74746452-74746471 None:intergenic 50.0%
AAACGACGTTGCGGTTCAGA+GGG + Chr7:74746451-74746470 None:intergenic 50.0%
AACCCCTTCCACTTCTCAAC+GGG - Chr7:74746799-74746818 MsG0780040236.01.T01:intron 50.0%
ACCCTCTTGTGATTGCAGGA+TGG - Chr7:74750139-74750158 MsG0780040236.01.T01:CDS 50.0%
ACTGTGTAGTGCTGTGACGA+CGG - Chr7:74748845-74748864 MsG0780040236.01.T01:intron 50.0%
AGAGCCGTGACCATTACATG+AGG - Chr7:74751024-74751043 MsG0780040236.01.T01:intron 50.0%
ATGTGCTTGAAACCCACGGA+TGG - Chr7:74747679-74747698 MsG0780040236.01.T01:intron 50.0%
CAACCCCTTCCACTTCTCAA+CGG - Chr7:74746798-74746817 MsG0780040236.01.T01:intron 50.0%
CACGGCAGAAGAAAACGGTA+AGG + Chr7:74748397-74748416 None:intergenic 50.0%
CCCAAGACACCATATGCTAG+AGG + Chr7:74748561-74748580 None:intergenic 50.0%
CGTGACCATTACATGAGGAG+AGG - Chr7:74751029-74751048 MsG0780040236.01.T01:intron 50.0%
CTCAGAGTTCCGGTTCAAAC+CGG - Chr7:74746547-74746566 MsG0780040236.01.T01:three_prime_UTR 50.0%
CTCCTCTTTGGTCACCCAAA+AGG + Chr7:74747966-74747985 None:intergenic 50.0%
GATAGCACAGCACCAGCAAA+GGG + Chr7:74749701-74749720 None:intergenic 50.0%
GATCAACCTTCTCAGGTCCA+AGG + Chr7:74747898-74747917 None:intergenic 50.0%
GATGAGCTTGCAGAGGAACT+GGG - Chr7:74751430-74751449 MsG0780040236.01.T01:CDS 50.0%
GCACATGTGCTTGAAACCCA+CGG - Chr7:74747675-74747694 MsG0780040236.01.T01:intron 50.0%
GCTTCTTTGTGGTAGAAGGG+TGG + Chr7:74747569-74747588 None:intergenic 50.0%
GGACCTCTTTCACTTGCTTG+GGG - Chr7:74751191-74751210 MsG0780040236.01.T01:intron 50.0%
GGAGGTAGGAATTGCATCTC+AGG - Chr7:74748267-74748286 MsG0780040236.01.T01:CDS 50.0%
GGATCAGGACTGTCTGAATC+AGG + Chr7:74748124-74748143 None:intergenic 50.0%
GGGAACAAATGGAGAAGAGG+GGG + Chr7:74747501-74747520 None:intergenic 50.0%
GTACCCGTTGAGAAGTGGAA+GGG + Chr7:74746805-74746824 None:intergenic 50.0%
GTGGACCTCTTTCACTTGCT+TGG - Chr7:74751189-74751208 MsG0780040236.01.T01:intron 50.0%
TACCCGTTGAGAAGTGGAAG+GGG + Chr7:74746804-74746823 None:intergenic 50.0%
TATGGCTATGTGCAGGAGGT+TGG - Chr7:74749334-74749353 MsG0780040236.01.T01:intron 50.0%
TCAGCAGGATCAACCTTCTC+AGG + Chr7:74747905-74747924 None:intergenic 50.0%
TCTCACTATTGGTACCTCGG+TGG - Chr7:74748246-74748265 MsG0780040236.01.T01:CDS 50.0%
TCTGCAAGCTCATCCCAAAC+AGG + Chr7:74751424-74751443 None:intergenic 50.0%
TCTTTGTGGTAGAAGGGTGG+TGG + Chr7:74747566-74747585 None:intergenic 50.0%
TGAGCCCTCTCCTCATGTAA+TGG + Chr7:74751037-74751056 None:intergenic 50.0%
TGATAGCACAGCACCAGCAA+AGG + Chr7:74749702-74749721 None:intergenic 50.0%
TGCAATCCAGCACATATGGC+AGG + Chr7:74749160-74749179 None:intergenic 50.0%
TGGATATGGCTATGTGCAGG+AGG - Chr7:74749330-74749349 MsG0780040236.01.T01:intron 50.0%
TGTACCCGTTGAGAAGTGGA+AGG + Chr7:74746806-74746825 None:intergenic 50.0%
TTCAGACAGTCCTGATCCAC+GGG - Chr7:74748126-74748145 MsG0780040236.01.T01:intron 50.0%
TTCCCCAAAAGGCTCCTCTT+TGG + Chr7:74747978-74747997 None:intergenic 50.0%
! AACCGGTTCACTGTTCCTTC+AGG - Chr7:74746564-74746583 MsG0780040236.01.T01:exon 50.0%
! CTGAGAAGAGTGTGTCTGTG+TGG - Chr7:74746386-74746405 MsG0780040236.01.T01:intron 50.0%
! GACCAAAGAGGAGCCTTTTG+GGG - Chr7:74747973-74747992 MsG0780040236.01.T01:intron 50.0%
! GTGACCAAAGAGGAGCCTTT+TGG - Chr7:74747971-74747990 MsG0780040236.01.T01:intron 50.0%
! TGTTTGGGATGAGCTTGCAG+AGG - Chr7:74751423-74751442 MsG0780040236.01.T01:CDS 50.0%
!! CTTTGGTTTGCTGCGTAAGG+AGG - Chr7:74748165-74748184 MsG0780040236.01.T01:intron 50.0%
!! TGGCCTCAACTAGCCGATTT+TGG + Chr7:74748066-74748085 None:intergenic 50.0%
ACGTTGCGGTTCAGAGGGAT+GGG + Chr7:74746446-74746465 None:intergenic 55.0%
ATTGGTACCTCGGTGGAGGT+AGG - Chr7:74748253-74748272 MsG0780040236.01.T01:CDS 55.0%
CACTATTGGTACCTCGGTGG+AGG - Chr7:74748249-74748268 MsG0780040236.01.T01:CDS 55.0%
CCTTCTCCCAGTTCCCCAAA+AGG + Chr7:74747989-74748008 None:intergenic 55.0%
CTTGCAGAGGAACTGGGCAT+AGG - Chr7:74751436-74751455 MsG0780040236.01.T01:CDS 55.0%
GGAACTCCTTGGACCTGAGA+AGG - Chr7:74747889-74747908 MsG0780040236.01.T01:intron 55.0%
GGATGAGCTTGCAGAGGAAC+TGG - Chr7:74751429-74751448 MsG0780040236.01.T01:CDS 55.0%
TACATTGCTAGGGCTGGGAG+TGG - Chr7:74750909-74750928 MsG0780040236.01.T01:intron 55.0%
TCAGACAGTCCTGATCCACG+GGG - Chr7:74748127-74748146 MsG0780040236.01.T01:intron 55.0%
TGCAATTCCTACCTCCACCG+AGG + Chr7:74748263-74748282 None:intergenic 55.0%
! AATCGGCTAGTTGAGGCCAC+TGG - Chr7:74748067-74748086 MsG0780040236.01.T01:intron 55.0%
!! AGAGGAGCCTTTTGGGGAAC+TGG - Chr7:74747979-74747998 MsG0780040236.01.T01:intron 55.0%
!! CCTTTTGGGGAACTGGGAGA+AGG - Chr7:74747986-74748005 MsG0780040236.01.T01:intron 55.0%
!! GAGGAGCCTTTTGGGGAACT+GGG - Chr7:74747980-74747999 MsG0780040236.01.T01:intron 55.0%
ACAGTCCTGATCCACGGGGT+GGG - Chr7:74748131-74748150 MsG0780040236.01.T01:intron 60.0%
GACGTTGCGGTTCAGAGGGA+TGG + Chr7:74746447-74746466 None:intergenic 60.0%
GTGTAGTGCTGTGACGACGG+AGG - Chr7:74748848-74748867 MsG0780040236.01.T01:intron 60.0%
TCACTTGCGGGTCCCTTTGC+TGG - Chr7:74749686-74749705 MsG0780040236.01.T01:intron 60.0%
! CTTCCAGTGGGGTGCCTTGA+CGG - Chr7:74750320-74750339 MsG0780040236.01.T01:intron 60.0%
! GGTGGGCCACGTGTTAGCTT+TGG - Chr7:74748148-74748167 MsG0780040236.01.T01:intron 60.0%
GACAGTCCTGATCCACGGGG+TGG - Chr7:74748130-74748149 MsG0780040236.01.T01:intron 65.0%
CTAACACGTGGCCCACCCCG+TGG + Chr7:74748145-74748164 None:intergenic 70.0%
CGTGGCCCACCCCGTGGATC+AGG + Chr7:74748139-74748158 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 74746345 74751708 74746345 ID=MsG0780040236.01;Name=MsG0780040236.01
Chr7 mRNA 74746345 74751708 74746345 ID=MsG0780040236.01.T01;Parent=MsG0780040236.01;Name=MsG0780040236.01.T01;_AED=0.32;_eAED=0.32;_QI=164|1|1|1|0.7|0.72|11|190|542
Chr7 exon 74746345 74746372 74746345 ID=MsG0780040236.01.T01:exon:14685;Parent=MsG0780040236.01.T01
Chr7 exon 74746414 74746734 74746414 ID=MsG0780040236.01.T01:exon:14684;Parent=MsG0780040236.01.T01
Chr7 five_prime_UTR 74751545 74751708 74751545 ID=MsG0780040236.01.T01:five_prime_utr;Parent=MsG0780040236.01.T01
Chr7 CDS 74751233 74751544 74751233 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74749765 74750226 74749765 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74749457 74749597 74749457 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74748603 74748704 74748603 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74748198 74748409 74748198 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74747893 74747943 74747893 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74747695 74747764 74747695 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74747123 74747191 74747123 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74746818 74746868 74746818 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 CDS 74746576 74746734 74746576 ID=MsG0780040236.01.T01:cds;Parent=MsG0780040236.01.T01
Chr7 three_prime_UTR 74746414 74746575 74746414 ID=MsG0780040236.01.T01:three_prime_utr;Parent=MsG0780040236.01.T01
Chr7 three_prime_UTR 74746345 74746372 74746345 ID=MsG0780040236.01.T01:three_prime_utr;Parent=MsG0780040236.01.T01
Chr7 mRNA 74746377 74751708 74746377 ID=MsG0780040236.01.T02;Parent=MsG0780040236.01;Name=MsG0780040236.01.T02;_AED=0.32;_eAED=0.32;_QI=164|1|1|1|0.77|0.9|10|199|542
Chr7 exon 74746377 74746734 74746377 ID=MsG0780040236.01.T02:exon:14686;Parent=MsG0780040236.01.T02
Chr7 five_prime_UTR 74751545 74751708 74751545 ID=MsG0780040236.01.T02:five_prime_utr;Parent=MsG0780040236.01.T02
Chr7 CDS 74751233 74751544 74751233 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74749765 74750226 74749765 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74749457 74749597 74749457 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74748603 74748704 74748603 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74748198 74748409 74748198 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74747893 74747943 74747893 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74747695 74747764 74747695 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74747123 74747191 74747123 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74746818 74746868 74746818 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 CDS 74746576 74746734 74746576 ID=MsG0780040236.01.T02:cds;Parent=MsG0780040236.01.T02
Chr7 three_prime_UTR 74746377 74746575 74746377 ID=MsG0780040236.01.T02:three_prime_utr;Parent=MsG0780040236.01.T02
Gene Sequence

>MsG0780040236.01.T01

ATGGGAACTTTAACAAATTGCACTTTACTCCCTCTAAACTCAGAGTTCCGGTTCAAACCGGTTCACTGTTCCTTCAGGAACAAAATCCACTACAACCACCGTTTCAATTCACATGTATCCAAATGGGCAAAGTTGAAGCACGTTGATTTCGATAGGTTTAAGTGTTTTTCAATCAATAACAAAGACGGTGTTGATGATGAAGGGGAAAATGGTAACAAGAATGATTCTAAATCCAATGTAACCACAGTGTTACCTGATGAAGATAGAGGCTTTAATTCTGATAAATCAACAACCCCTTCCACTTCTCAACGGTCATCTTTGTCCTCACTTGGATCTGTGTACAACAATTTTCAAGTTGATTCTTTCAAACTCATGGAACTCCTTGGACCTGAGAAGGTTGATCCTGCTGATGTAAAGAAAATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTGACCAAAGAGGAGCCTTTTGGGGAACTGGGAGAAGGCGTTCTTTTCATCGGAAATTTAAGGGGAAAGAGAGAGGACGTTTTTTCCATACTCCAAAATCGGCTAGTTGAGGCCACTGGCGATAAGTACAACCTTTTTATGGTAGAGGAACCTGATTCAGACAGTCCTGATCCACGGGGTGGGCCACGTGTTAGCTTTGGTTTGCTGCGTAAGGAGGTTTCCGAGCCAGAAGAAACAACACTTTGGCAATATGTCGTTGCATCTCTGTTGTTTCTTCTCACTATTGGTACCTCGGTGGAGGTAGGAATTGCATCTCAGATCAACAGACTCCCCCCAGAACTAGTGAAATTCTTGACAGATCCTAACTATACTGAAGCCCCAGATATGGAGATGCTATATCCATTTGTTGAGTCAGCGTTACCTCTAGCATATGGTGTCTTGGGAGTTCTTCTATTTCATGAGGTTGGACACTTTTTAGCTGCATTTCCCAAACAAGTAAAATTAAGCATTCCTTTCTTCATTCCCCATATCACTCTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCTATCCTTCCTGATAGAAGTACTCAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTGCTATCATTTTCGATGTTTGCTGTTGGCCTTCTTCTTTCATCAAATCCAGATGTAGCTGGAGATTTGGTGCAAGTTCCTAGCATGTTGTTTCAAGGTTCTTTGCTACTTGGTTTAATCAGTAGAGCAACTCTTGGTTATGCAGCGGTTCATGCTGCAACAGTTCCAATTCACCCTCTTGTGATTGCAGGATGGTGTGGGTTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGACGGTGGCAGGTCTGTGCAGGGTGCTTTTGGAAAAGGTGCACTAATGGTCTTTGGTTTGACCACTTATACATTGCTAGGGCTGGGAGTGCTTGGTGGACCTCTTTCACTTGCTTGGGGATTTTTTGTCATATTTTCGCAGAGATCACCGGAGAAACCATGCTTAAATGACGTGACAGAAGTTGGAACATGGAGACAGACATTTGTGGGGGTTGCTATTTTTCTTGCTGTCTTGACTCTTCTTCCTGTTTGGGATGAGCTTGCAGAGGAACTGGGCATAGGTCTTGTAACCACATTTTAG

>MsG0780040236.01.T02

ATGGGAACTTTAACAAATTGCACTTTACTCCCTCTAAACTCAGAGTTCCGGTTCAAACCGGTTCACTGTTCCTTCAGGAACAAAATCCACTACAACCACCGTTTCAATTCACATGTATCCAAATGGGCAAAGTTGAAGCACGTTGATTTCGATAGGTTTAAGTGTTTTTCAATCAATAACAAAGACGGTGTTGATGATGAAGGGGAAAATGGTAACAAGAATGATTCTAAATCCAATGTAACCACAGTGTTACCTGATGAAGATAGAGGCTTTAATTCTGATAAATCAACAACCCCTTCCACTTCTCAACGGTCATCTTTGTCCTCACTTGGATCTGTGTACAACAATTTTCAAGTTGATTCTTTCAAACTCATGGAACTCCTTGGACCTGAGAAGGTTGATCCTGCTGATGTAAAGAAAATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTGACCAAAGAGGAGCCTTTTGGGGAACTGGGAGAAGGCGTTCTTTTCATCGGAAATTTAAGGGGAAAGAGAGAGGACGTTTTTTCCATACTCCAAAATCGGCTAGTTGAGGCCACTGGCGATAAGTACAACCTTTTTATGGTAGAGGAACCTGATTCAGACAGTCCTGATCCACGGGGTGGGCCACGTGTTAGCTTTGGTTTGCTGCGTAAGGAGGTTTCCGAGCCAGAAGAAACAACACTTTGGCAATATGTCGTTGCATCTCTGTTGTTTCTTCTCACTATTGGTACCTCGGTGGAGGTAGGAATTGCATCTCAGATCAACAGACTCCCCCCAGAACTAGTGAAATTCTTGACAGATCCTAACTATACTGAAGCCCCAGATATGGAGATGCTATATCCATTTGTTGAGTCAGCGTTACCTCTAGCATATGGTGTCTTGGGAGTTCTTCTATTTCATGAGGTTGGACACTTTTTAGCTGCATTTCCCAAACAAGTAAAATTAAGCATTCCTTTCTTCATTCCCCATATCACTCTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCTATCCTTCCTGATAGAAGTACTCAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTGCTATCATTTTCGATGTTTGCTGTTGGCCTTCTTCTTTCATCAAATCCAGATGTAGCTGGAGATTTGGTGCAAGTTCCTAGCATGTTGTTTCAAGGTTCTTTGCTACTTGGTTTAATCAGTAGAGCAACTCTTGGTTATGCAGCGGTTCATGCTGCAACAGTTCCAATTCACCCTCTTGTGATTGCAGGATGGTGTGGGTTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGACGGTGGCAGGTCTGTGCAGGGTGCTTTTGGAAAAGGTGCACTAATGGTCTTTGGTTTGACCACTTATACATTGCTAGGGCTGGGAGTGCTTGGTGGACCTCTTTCACTTGCTTGGGGATTTTTTGTCATATTTTCGCAGAGATCACCGGAGAAACCATGCTTAAATGACGTGACAGAAGTTGGAACATGGAGACAGACATTTGTGGGGGTTGCTATTTTTCTTGCTGTCTTGACTCTTCTTCCTGTTTGGGATGAGCTTGCAGAGGAACTGGGCATAGGTCTTGTAACCACATTTTAG

Protein sequence

>MsG0780040236.01.T01

MGTLTNCTLLPLNSEFRFKPVHCSFRNKIHYNHRFNSHVSKWAKLKHVDFDRFKCFSINNKDGVDDEGENGNKNDSKSNVTTVLPDEDRGFNSDKSTTPSTSQRSSLSSLGSVYNNFQVDSFKLMELLGPEKVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGVLFIGNLRGKREDVFSILQNRLVEATGDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGTSVEVGIASQINRLPPELVKFLTDPNYTEAPDMEMLYPFVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGAVLSFSMFAVGLLLSSNPDVAGDLVQVPSMLFQGSLLLGLISRATLGYAAVHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSVQGAFGKGALMVFGLTTYTLLGLGVLGGPLSLAWGFFVIFSQRSPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELAEELGIGLVTTF*

>MsG0780040236.01.T02

MGTLTNCTLLPLNSEFRFKPVHCSFRNKIHYNHRFNSHVSKWAKLKHVDFDRFKCFSINNKDGVDDEGENGNKNDSKSNVTTVLPDEDRGFNSDKSTTPSTSQRSSLSSLGSVYNNFQVDSFKLMELLGPEKVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGVLFIGNLRGKREDVFSILQNRLVEATGDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGTSVEVGIASQINRLPPELVKFLTDPNYTEAPDMEMLYPFVESALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPHITLGSFGAITQFKSILPDRSTQVDISLAGPFAGAVLSFSMFAVGLLLSSNPDVAGDLVQVPSMLFQGSLLLGLISRATLGYAAVHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRSVQGAFGKGALMVFGLTTYTLLGLGVLGGPLSLAWGFFVIFSQRSPEKPCLNDVTEVGTWRQTFVGVAIFLAVLTLLPVWDELAEELGIGLVTTF*