Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016559.01.T01 | PNX99706.1 | 74.638 | 138 | 5 | 1 | 45 | 152 | 54 | 191 | 2.28E-61 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016559.01.T01 | Q6NRJ7 | 66.197 | 71 | 23 | 1 | 45 | 115 | 86 | 155 | 1.14E-21 | 89 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016559.01.T01 | A0A2K3N9K0 | 74.638 | 138 | 5 | 1 | 45 | 152 | 54 | 191 | 1.09e-61 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0380016559.01 | 0.847050 | 1.478016e-59 | 2.594582e-56 |
| MsG0080048137.01 | MsG0380016559.01 | 0.808610 | 2.845393e-50 | 1.634184e-47 |
| MsG0080048152.01 | MsG0380016559.01 | 0.803441 | 3.480848e-49 | 1.749334e-46 |
| MsG0080048197.01 | MsG0380016559.01 | 0.832973 | 6.962317e-56 | 7.907457e-53 |
| MsG0080048687.01 | MsG0380016559.01 | 0.804472 | 2.125370e-49 | 1.096768e-46 |
| MsG0080048784.01 | MsG0380016559.01 | 0.807838 | 4.155916e-50 | 2.339004e-47 |
| MsG0080048817.01 | MsG0380016559.01 | 0.807054 | 6.096583e-50 | 3.361979e-47 |
| MsG0080049135.01 | MsG0380016559.01 | 0.804631 | 1.968622e-49 | 1.020063e-46 |
| MsG0180000139.01 | MsG0380016559.01 | 0.818985 | 1.473080e-52 | 1.119567e-49 |
| MsG0180000205.01 | MsG0380016559.01 | 0.807821 | 4.190610e-50 | 2.357476e-47 |
| MsG0180000339.01 | MsG0380016559.01 | 0.835531 | 1.589282e-56 | 1.948810e-53 |
| MsG0180000381.01 | MsG0380016559.01 | 0.811817 | 5.790970e-51 | 3.620671e-48 |
| MsG0180000384.01 | MsG0380016559.01 | 0.837137 | 6.205513e-57 | 7.986412e-54 |
| MsG0180000575.01 | MsG0380016559.01 | 0.835281 | 1.838825e-56 | 2.238184e-53 |
| MsG0180000611.01 | MsG0380016559.01 | 0.815866 | 7.421792e-52 | 5.177168e-49 |
| MsG0180000614.01 | MsG0380016559.01 | 0.838043 | 3.635703e-57 | 4.811627e-54 |
| MsG0180000615.01 | MsG0380016559.01 | 0.801222 | 9.967157e-49 | 4.734104e-46 |
| MsG0180000743.01 | MsG0380016559.01 | 0.880988 | 3.487019e-70 | 2.007309e-66 |
| MsG0180000777.01 | MsG0380016559.01 | 0.807638 | 4.583718e-50 | 2.566315e-47 |
| MsG0180000806.01 | MsG0380016559.01 | 0.828182 | 1.036134e-54 | 1.022248e-51 |
| MsG0180000982.01 | MsG0380016559.01 | 0.832694 | 8.168574e-56 | 9.200106e-53 |
| MsG0180001118.01 | MsG0380016559.01 | 0.819666 | 1.030274e-52 | 7.978829e-50 |
| MsG0180001356.01 | MsG0380016559.01 | 0.812515 | 4.078959e-51 | 2.598786e-48 |
| MsG0180001382.01 | MsG0380016559.01 | 0.801278 | 9.710176e-49 | 4.618640e-46 |
| MsG0180001886.01 | MsG0380016559.01 | 0.837496 | 5.022316e-57 | 6.536038e-54 |
| MsG0180002489.01 | MsG0380016559.01 | 0.815614 | 8.446047e-52 | 5.851882e-49 |
| MsG0180002504.01 | MsG0380016559.01 | 0.810707 | 1.008065e-50 | 6.120529e-48 |
| MsG0180002547.01 | MsG0380016559.01 | 0.891177 | 5.041050e-74 | 4.371397e-70 |
| MsG0180002794.01 | MsG0380016559.01 | 0.845306 | 4.408293e-59 | 7.315455e-56 |
| MsG0180003651.01 | MsG0380016559.01 | 0.811530 | 6.687231e-51 | 4.149557e-48 |
| MsG0180003793.01 | MsG0380016559.01 | 0.847135 | 1.400721e-59 | 2.465923e-56 |
| MsG0180003815.01 | MsG0380016559.01 | 0.807214 | 5.639489e-50 | 3.122858e-47 |
| MsG0180004050.01 | MsG0380016559.01 | 0.810783 | 9.708309e-51 | 5.906288e-48 |
| MsG0180004128.01 | MsG0380016559.01 | 0.801357 | 9.353736e-49 | 4.457966e-46 |
| MsG0180004130.01 | MsG0380016559.01 | 0.829776 | 4.260877e-55 | 4.404644e-52 |
| MsG0180004481.01 | MsG0380016559.01 | 0.876917 | 9.533531e-69 | 4.704775e-65 |
| MsG0180004482.01 | MsG0380016559.01 | 0.859149 | 5.051440e-63 | 1.320806e-59 |
| MsG0180004509.01 | MsG0380016559.01 | 0.865421 | 5.979630e-65 | 1.944130e-61 |
| MsG0180004854.01 | MsG0380016559.01 | 0.839525 | 1.504148e-57 | 2.082604e-54 |
| MsG0180004861.01 | MsG0380016559.01 | 0.890320 | 1.095844e-73 | 9.169950e-70 |
| MsG0180004928.01 | MsG0380016559.01 | 0.837802 | 4.192298e-57 | 5.507567e-54 |
| MsG0180005169.01 | MsG0380016559.01 | 0.825170 | 5.425005e-54 | 4.907491e-51 |
| MsG0180005193.01 | MsG0380016559.01 | 0.822205 | 2.683013e-53 | 2.230764e-50 |
| MsG0180005334.01 | MsG0380016559.01 | 0.831637 | 1.491056e-55 | 1.627671e-52 |
| MsG0180005668.01 | MsG0380016559.01 | 0.829016 | 6.515618e-55 | 6.585838e-52 |
| MsG0180005990.01 | MsG0380016559.01 | 0.823226 | 1.552395e-53 | 1.328654e-50 |
| MsG0180005993.01 | MsG0380016559.01 | 0.812658 | 3.794467e-51 | 2.426605e-48 |
| MsG0180006013.01 | MsG0380016559.01 | 0.833479 | 5.208044e-56 | 6.004969e-53 |
| MsG0180006046.01 | MsG0380016559.01 | 0.810942 | 8.970064e-51 | 5.480671e-48 |
| MsG0180006144.01 | MsG0380016559.01 | 0.811986 | 5.321026e-51 | 3.341950e-48 |
| MsG0180006261.01 | MsG0380016559.01 | 0.802405 | 5.698451e-49 | 2.789151e-46 |
| MsG0280006422.01 | MsG0380016559.01 | 0.852514 | 4.392274e-61 | 9.199944e-58 |
| MsG0280010595.01 | MsG0380016559.01 | 0.823177 | 1.593609e-53 | 1.362088e-50 |
| MsG0280010776.01 | MsG0380016559.01 | 0.878271 | 3.214462e-69 | 1.667898e-65 |
| MsG0280011307.01 | MsG0380016559.01 | 0.813888 | 2.038091e-51 | 1.347308e-48 |
| MsG0280011339.01 | MsG0380016559.01 | 0.807411 | 5.122063e-50 | 2.850964e-47 |
| MsG0280011371.01 | MsG0380016559.01 | 0.842759 | 2.124706e-58 | 3.253684e-55 |
| MsG0280011387.01 | MsG0380016559.01 | 0.830337 | 3.107993e-55 | 3.265076e-52 |
| MsG0280011388.01 | MsG0380016559.01 | 0.817297 | 3.547850e-52 | 2.573704e-49 |
| MsG0380011581.01 | MsG0380016559.01 | 0.826128 | 3.214873e-54 | 2.988480e-51 |
| MsG0380011614.01 | MsG0380016559.01 | 0.812356 | 4.417958e-51 | 2.802949e-48 |
| MsG0380011704.01 | MsG0380016559.01 | 0.822754 | 2.000358e-53 | 1.689497e-50 |
| MsG0380011747.01 | MsG0380016559.01 | 0.841339 | 5.045758e-58 | 7.390699e-55 |
| MsG0380012073.01 | MsG0380016559.01 | 0.830271 | 3.226925e-55 | 3.383384e-52 |
| MsG0380012570.01 | MsG0380016559.01 | 0.834845 | 2.368225e-56 | 2.844792e-53 |
| MsG0380013085.01 | MsG0380016559.01 | 0.843917 | 1.043365e-58 | 1.657269e-55 |
| MsG0380014296.01 | MsG0380016559.01 | 0.801229 | 9.937627e-49 | 4.720850e-46 |
| MsG0380014797.01 | MsG0380016559.01 | 0.814731 | 1.326672e-51 | 8.972648e-49 |
| MsG0380015027.01 | MsG0380016559.01 | 0.894732 | 1.869477e-75 | 1.882066e-71 |
| MsG0380015435.01 | MsG0380016559.01 | 0.876431 | 1.404228e-68 | 6.806699e-65 |
| MsG0380015818.01 | MsG0380016559.01 | 0.875156 | 3.846135e-68 | 1.777565e-64 |
| MsG0380016067.01 | MsG0380016559.01 | 0.873490 | 1.412222e-67 | 6.141287e-64 |
| MsG0380016133.01 | MsG0380016559.01 | 0.877838 | 4.558147e-69 | 2.326182e-65 |
| MsG0380016290.01 | MsG0380016559.01 | 0.852902 | 3.403661e-61 | 7.221647e-58 |
| MsG0380016559.01 | MsG0380016560.01 | 0.989963 | 1.950014e-180 | 1.299679e-173 |
| MsG0380016559.01 | MsG0380016604.01 | 0.843113 | 1.710506e-58 | 2.648750e-55 |
| MsG0380016559.01 | MsG0380016671.01 | 0.810599 | 1.063906e-50 | 6.440693e-48 |
| MsG0380016559.01 | MsG0380016701.01 | 0.822338 | 2.498276e-53 | 2.085207e-50 |
| MsG0380016559.01 | MsG0380016775.01 | 0.864412 | 1.238733e-64 | 3.886060e-61 |
| MsG0380016559.01 | MsG0380016860.01 | 0.850574 | 1.554811e-60 | 3.059060e-57 |
| MsG0380016559.01 | MsG0380017369.01 | 0.800517 | 1.388516e-48 | 6.478333e-46 |
| MsG0380016559.01 | MsG0380017382.01 | 0.876166 | 1.732361e-68 | 8.314497e-65 |
| MsG0380016559.01 | MsG0380017540.01 | 0.869137 | 3.877305e-66 | 1.439249e-62 |
| MsG0380016559.01 | MsG0380017947.01 | 0.860899 | 1.496701e-63 | 4.156312e-60 |
| MsG0380016559.01 | MsG0380017979.01 | 0.875849 | 2.226944e-68 | 1.056149e-64 |
| MsG0380016559.01 | MsG0380018033.01 | 0.853967 | 1.683184e-61 | 3.701561e-58 |
| MsG0380016559.01 | MsG0380018044.01 | 0.858003 | 1.110248e-62 | 2.792668e-59 |
| MsG0380016559.01 | MsG0480018110.01 | 0.896667 | 2.961533e-76 | 3.235931e-72 |
| MsG0380016559.01 | MsG0480018124.01 | 0.813983 | 1.941927e-51 | 1.286972e-48 |
| MsG0380016559.01 | MsG0480018214.01 | 0.803522 | 3.348665e-49 | 1.686507e-46 |
| MsG0380016559.01 | MsG0480018319.01 | 0.844786 | 6.093677e-59 | 9.946623e-56 |
| MsG0380016559.01 | MsG0480018477.01 | 0.827451 | 1.553580e-54 | 1.500447e-51 |
| MsG0380016559.01 | MsG0480018906.01 | 0.808794 | 2.599922e-50 | 1.500402e-47 |
| MsG0380016559.01 | MsG0480019380.01 | 0.809613 | 1.735331e-50 | 1.023708e-47 |
| MsG0380016559.01 | MsG0480019416.01 | 0.801768 | 7.705602e-49 | 3.710568e-46 |
| MsG0380016559.01 | MsG0480021006.01 | 0.805187 | 1.506731e-49 | 7.920117e-47 |
| MsG0380016559.01 | MsG0480021041.01 | 0.831370 | 1.734780e-55 | 1.878735e-52 |
| MsG0380016559.01 | MsG0480021448.01 | 0.818576 | 1.823440e-52 | 1.370108e-49 |
| MsG0380016559.01 | MsG0480021451.01 | 0.823214 | 1.562080e-53 | 1.336523e-50 |
| MsG0380016559.01 | MsG0480021453.01 | 0.847655 | 1.008084e-59 | 1.804347e-56 |
| MsG0380016559.01 | MsG0480021465.01 | 0.812767 | 3.592910e-51 | 2.304205e-48 |
| MsG0380016559.01 | MsG0480021706.01 | 0.823437 | 1.386045e-53 | 1.193333e-50 |
| MsG0380016559.01 | MsG0480021750.01 | 0.873394 | 1.520930e-67 | 6.590162e-64 |
| MsG0380016559.01 | MsG0480021832.01 | 0.829466 | 5.068273e-55 | 5.191429e-52 |
| MsG0380016559.01 | MsG0480021959.01 | 0.806541 | 7.823997e-50 | 4.257883e-47 |
| MsG0380016559.01 | MsG0480021994.01 | 0.857578 | 1.483590e-62 | 3.679116e-59 |
| MsG0380016559.01 | MsG0480022035.01 | 0.825461 | 4.629881e-54 | 4.222468e-51 |
| MsG0380016559.01 | MsG0480022223.01 | 0.880499 | 5.220352e-70 | 2.949240e-66 |
| MsG0380016559.01 | MsG0480022292.01 | 0.842792 | 2.082548e-58 | 3.192483e-55 |
| MsG0380016559.01 | MsG0480022493.01 | 0.820085 | 8.262092e-53 | 6.474405e-50 |
| MsG0380016559.01 | MsG0480022672.01 | 0.803117 | 4.063118e-49 | 2.024952e-46 |
| MsG0380016559.01 | MsG0480022696.01 | 0.841376 | 4.932441e-58 | 7.233853e-55 |
| MsG0380016559.01 | MsG0480022711.01 | 0.863723 | 2.030198e-64 | 6.217635e-61 |
| MsG0380016559.01 | MsG0480022768.01 | 0.800314 | 1.527229e-48 | 7.089201e-46 |
| MsG0380016559.01 | MsG0480022790.01 | 0.807885 | 4.062167e-50 | 2.288971e-47 |
| MsG0380016559.01 | MsG0480022795.01 | 0.804498 | 2.098554e-49 | 1.083651e-46 |
| MsG0380016559.01 | MsG0480022913.01 | 0.843353 | 1.476779e-58 | 2.304484e-55 |
| MsG0380016559.01 | MsG0480022960.01 | 0.885091 | 1.096116e-71 | 7.422012e-68 |
| MsG0380016559.01 | MsG0480023055.01 | 0.807016 | 6.211129e-50 | 3.421688e-47 |
| MsG0380016559.01 | MsG0480023162.01 | 0.803624 | 3.189012e-49 | 1.610252e-46 |
| MsG0380016559.01 | MsG0480023221.01 | 0.871770 | 5.305360e-67 | 2.165996e-63 |
| MsG0380016559.01 | MsG0480023356.01 | 0.834631 | 2.680911e-56 | 3.199838e-53 |
| MsG0380016559.01 | MsG0480023357.01 | 0.829005 | 6.555994e-55 | 6.624492e-52 |
| MsG0380016559.01 | MsG0480023660.01 | 0.806826 | 6.812705e-50 | 3.734714e-47 |
| MsG0380016559.01 | MsG0480023738.01 | 0.867558 | 1.252616e-65 | 4.392305e-62 |
| MsG0380016559.01 | MsG0480023771.01 | 0.862693 | 4.230587e-64 | 1.249970e-60 |
| MsG0380016559.01 | MsG0480023844.01 | 0.803768 | 2.977927e-49 | 1.509218e-46 |
| MsG0380016559.01 | MsG0480023909.01 | 0.822340 | 2.496595e-53 | 2.083865e-50 |
| MsG0380016559.01 | MsG0480023994.01 | 0.810337 | 1.211914e-50 | 7.285528e-48 |
| MsG0380016559.01 | MsG0580024051.01 | 0.830306 | 3.163711e-55 | 3.320367e-52 |
| MsG0380016559.01 | MsG0580024084.01 | 0.867518 | 1.290411e-65 | 4.517743e-62 |
| MsG0380016559.01 | MsG0580024197.01 | 0.808943 | 2.415819e-50 | 1.399699e-47 |
| MsG0380016559.01 | MsG0580024468.01 | 0.824706 | 6.978932e-54 | 6.230426e-51 |
| MsG0380016559.01 | MsG0580024619.01 | 0.833699 | 4.590594e-56 | 5.327590e-53 |
| MsG0380016559.01 | MsG0580024698.01 | 0.852438 | 4.615575e-61 | 9.644723e-58 |
| MsG0380016559.01 | MsG0580024727.01 | 0.819745 | 9.882234e-53 | 7.670237e-50 |
| MsG0380016559.01 | MsG0580024754.01 | 0.834103 | 3.636814e-56 | 4.272714e-53 |
| MsG0380016559.01 | MsG0580025268.01 | 0.874757 | 5.263112e-68 | 2.397422e-64 |
| MsG0380016559.01 | MsG0580025756.01 | 0.866397 | 2.938359e-65 | 9.888750e-62 |
| MsG0380016559.01 | MsG0580026137.01 | 0.827364 | 1.629665e-54 | 1.570138e-51 |
| MsG0380016559.01 | MsG0580026301.01 | 0.852193 | 5.421706e-61 | 1.124114e-57 |
| MsG0380016559.01 | MsG0580026439.01 | 0.807335 | 5.314715e-50 | 2.952353e-47 |
| MsG0380016559.01 | MsG0580026485.01 | 0.851306 | 9.671559e-61 | 1.949370e-57 |
| MsG0380016559.01 | MsG0580027361.01 | 0.863907 | 1.780324e-64 | 5.486486e-61 |
| MsG0380016559.01 | MsG0580028582.01 | 0.819646 | 1.041287e-52 | 8.059580e-50 |
| MsG0380016559.01 | MsG0580029717.01 | 0.831947 | 1.250297e-55 | 1.377497e-52 |
| MsG0380016559.01 | MsG0580030249.01 | 0.802988 | 4.319166e-49 | 2.145511e-46 |
| MsG0380016559.01 | MsG0680030350.01 | 0.807794 | 4.246564e-50 | 2.387306e-47 |
| MsG0380016559.01 | MsG0680030415.01 | 0.829714 | 4.410848e-55 | 4.551280e-52 |
| MsG0380016559.01 | MsG0680031488.01 | 0.810782 | 9.714402e-51 | 5.909831e-48 |
| MsG0380016559.01 | MsG0680031507.01 | 0.822269 | 2.592504e-53 | 2.159520e-50 |
| MsG0380016559.01 | MsG0680031628.01 | 0.814141 | 1.792084e-51 | 1.192833e-48 |
| MsG0380016559.01 | MsG0680032762.01 | 0.800535 | 1.377234e-48 | 6.428406e-46 |
| MsG0380016559.01 | MsG0680032809.01 | 0.817184 | 3.762382e-52 | 2.720885e-49 |
| MsG0380016559.01 | MsG0680034671.01 | 0.842990 | 1.844993e-58 | 2.845760e-55 |
| MsG0380016559.01 | MsG0680035577.01 | 0.808652 | 2.787856e-50 | 1.602874e-47 |
| MsG0380016559.01 | MsG0680035877.01 | 0.841860 | 3.677433e-58 | 5.475140e-55 |
| MsG0380016559.01 | MsG0680035888.01 | 0.839397 | 1.624282e-57 | 2.240389e-54 |
| MsG0380016559.01 | MsG0780036240.01 | 0.810967 | 8.858098e-51 | 5.415916e-48 |
| MsG0380016559.01 | MsG0780036288.01 | 0.823773 | 1.156322e-53 | 1.005229e-50 |
| MsG0380016559.01 | MsG0780036546.01 | 0.828197 | 1.027481e-54 | 1.014170e-51 |
| MsG0380016559.01 | MsG0780036870.01 | 0.856016 | 4.276182e-62 | 1.006455e-58 |
| MsG0380016559.01 | MsG0780037124.01 | 0.827009 | 1.981971e-54 | 1.889483e-51 |
| MsG0380016559.01 | MsG0780037240.01 | 0.800283 | 1.550090e-48 | 7.189437e-46 |
| MsG0380016559.01 | MsG0780037590.01 | -0.814904 | 1.214841e-51 | 8.254149e-49 |
| MsG0380016559.01 | MsG0780038400.01 | 0.862356 | 5.368809e-64 | 1.567751e-60 |
| MsG0380016559.01 | MsG0780038587.01 | 0.824352 | 8.454738e-54 | 7.469964e-51 |
| MsG0380016559.01 | MsG0780039340.01 | 0.820780 | 5.724513e-53 | 4.572655e-50 |
| MsG0380016559.01 | MsG0780039844.01 | 0.820084 | 8.267579e-53 | 6.478494e-50 |
| MsG0380016559.01 | MsG0780039848.01 | 0.844316 | 8.152919e-59 | 1.311117e-55 |
| MsG0380016559.01 | MsG0780040162.01 | 0.807205 | 5.663792e-50 | 3.135580e-47 |
| MsG0380016559.01 | MsG0780040511.01 | 0.806212 | 9.177461e-50 | 4.952917e-47 |
| MsG0380016559.01 | MsG0780040545.01 | 0.852856 | 3.506766e-61 | 7.429694e-58 |
| MsG0380016559.01 | MsG0780040718.01 | 0.823253 | 1.530172e-53 | 1.310598e-50 |
| MsG0380016559.01 | MsG0780040734.01 | 0.807126 | 5.886496e-50 | 3.252009e-47 |
| MsG0380016559.01 | MsG0780041137.01 | 0.827606 | 1.426134e-54 | 1.383376e-51 |
| MsG0380016559.01 | MsG0780041223.01 | 0.871839 | 5.032909e-67 | 2.059798e-63 |
| MsG0380016559.01 | MsG0780041224.01 | 0.805950 | 1.041958e-49 | 5.585608e-47 |
| MsG0380016559.01 | MsG0780041268.01 | 0.810143 | 1.334437e-50 | 7.981667e-48 |
| MsG0380016559.01 | MsG0780041295.01 | 0.812285 | 4.577421e-51 | 2.898606e-48 |
| MsG0380016559.01 | MsG0780041391.01 | 0.826106 | 3.255028e-54 | 3.023835e-51 |
| MsG0380016559.01 | MsG0780041392.01 | 0.854174 | 1.467397e-61 | 3.249415e-58 |
| MsG0380016559.01 | MsG0780041435.01 | 0.831487 | 1.623362e-55 | 1.764231e-52 |
| MsG0380016559.01 | MsG0780041462.01 | 0.833657 | 4.700957e-56 | 5.449346e-53 |
| MsG0380016559.01 | MsG0780041507.01 | 0.800508 | 1.394437e-48 | 6.504325e-46 |
| MsG0380016559.01 | MsG0780041796.01 | 0.801122 | 1.045160e-48 | 4.951789e-46 |
| MsG0380016559.01 | MsG0880042033.01 | 0.836521 | 8.912103e-57 | 1.125846e-53 |
| MsG0380016559.01 | MsG0880042108.01 | 0.831198 | 1.912814e-55 | 2.060879e-52 |
| MsG0380016559.01 | MsG0880042128.01 | 0.812260 | 4.635740e-51 | 2.933506e-48 |
| MsG0380016559.01 | MsG0880042131.01 | 0.838366 | 3.000720e-57 | 4.010293e-54 |
| MsG0380016559.01 | MsG0880042519.01 | 0.867411 | 1.396370e-65 | 4.870979e-62 |
| MsG0380016559.01 | MsG0880042991.01 | 0.837918 | 3.915129e-57 | 5.161244e-54 |
| MsG0380016559.01 | MsG0880043477.01 | 0.879154 | 1.570874e-69 | 8.424967e-66 |
| MsG0380016559.01 | MsG0880044101.01 | 0.821171 | 4.653354e-53 | 3.757778e-50 |
| MsG0380016559.01 | MsG0880044394.01 | 0.827682 | 1.366819e-54 | 1.328881e-51 |
| MsG0380016559.01 | MsG0880044728.01 | 0.835614 | 1.514155e-56 | 1.861345e-53 |
| MsG0380016559.01 | MsG0880044975.01 | 0.846002 | 2.854689e-59 | 4.845102e-56 |
| MsG0380016559.01 | MsG0880044990.01 | 0.810695 | 1.014406e-50 | 6.156897e-48 |
| MsG0380016559.01 | MsG0880045017.01 | 0.858512 | 7.829816e-63 | 2.003283e-59 |
| MsG0380016559.01 | MsG0880045145.01 | 0.807976 | 3.885659e-50 | 2.194840e-47 |
| MsG0380016559.01 | MsG0880045613.01 | 0.800018 | 1.754509e-48 | 8.082750e-46 |
| MsG0380016559.01 | MsG0880045656.01 | 0.825181 | 5.391174e-54 | 4.878601e-51 |
| MsG0380016559.01 | MsG0880045704.01 | -0.815762 | 7.831037e-52 | 5.447517e-49 |
| MsG0380016559.01 | MsG0880045965.01 | 0.811442 | 6.988106e-51 | 4.326261e-48 |
| MsG0380016559.01 | MsG0880046089.01 | 0.824308 | 8.658924e-54 | 7.640556e-51 |
| MsG0380016559.01 | MsG0880046126.01 | 0.831043 | 2.086919e-55 | 2.238276e-52 |
| MsG0380016559.01 | MsG0880046631.01 | 0.819104 | 1.383861e-52 | 1.055118e-49 |
| MsG0380016559.01 | MsG0880046963.01 | -0.802148 | 6.436483e-49 | 3.129711e-46 |
| MsG0380016559.01 | MsG0880047052.01 | 0.815814 | 7.622145e-52 | 5.309544e-49 |
| MsG0380016559.01 | MsG0880047212.01 | 0.846721 | 1.817714e-59 | 3.157670e-56 |
| MsG0380016559.01 | MsG0880047427.01 | 0.857552 | 1.510198e-62 | 3.741796e-59 |
| MsG0380016559.01 | MsG0880047763.01 | 0.803574 | 3.267073e-49 | 1.647628e-46 |
| MsG0280006483.01 | MsG0380016559.01 | 0.888109 | 7.903003e-73 | 6.038821e-69 |
| MsG0280006593.01 | MsG0380016559.01 | 0.874712 | 5.451717e-68 | 2.479032e-64 |
| MsG0280006993.01 | MsG0380016559.01 | 0.845983 | 2.889190e-59 | 4.900845e-56 |
| MsG0280007153.01 | MsG0380016559.01 | 0.815979 | 7.004507e-52 | 4.901334e-49 |
| MsG0280007193.01 | MsG0380016559.01 | -0.812558 | 3.991974e-51 | 2.546190e-48 |
| MsG0280007787.01 | MsG0380016559.01 | 0.826208 | 3.078147e-54 | 2.867880e-51 |
| MsG0280007847.01 | MsG0380016559.01 | 0.886072 | 4.699330e-72 | 3.306562e-68 |
| MsG0280008429.01 | MsG0380016559.01 | 0.855775 | 5.029461e-62 | 1.174325e-58 |
| MsG0280009353.01 | MsG0380016559.01 | 0.829172 | 5.971708e-55 | 6.064741e-52 |
| MsG0280009575.01 | MsG0380016559.01 | 0.865800 | 4.540651e-65 | 1.496362e-61 |
| MsG0280009578.01 | MsG0380016559.01 | 0.827041 | 1.947284e-54 | 1.858188e-51 |
| MsG0280010013.01 | MsG0380016559.01 | 0.867979 | 9.175949e-66 | 3.264856e-62 |
| MsG0280010205.01 | MsG0380016559.01 | 0.814305 | 1.648453e-51 | 1.102178e-48 |
| MsG0280010258.01 | MsG0380016559.01 | 0.807913 | 4.007418e-50 | 2.259704e-47 |
| MsG0280010434.01 | MsG0380016559.01 | 0.845795 | 3.250457e-59 | 5.480327e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016559.01.T01 | MTR_3g091920 | 97.183 | 71 | 2 | 0 | 45 | 115 | 85 | 155 | 2.48e-43 | 141 |
| MsG0380016559.01.T01 | MTR_3g091920 | 97.183 | 71 | 2 | 0 | 45 | 115 | 102 | 172 | 4.88e-43 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016559.01.T01 | AT1G09150 | 83.562 | 73 | 12 | 0 | 45 | 117 | 85 | 157 | 4.58e-37 | 125 |
Find 56 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATTTCTTCATTATATC+TGG | 0.192913 | 3:+85140372 | None:intergenic |
| CCATTTGATCTTTATTTGTT+TGG | 0.271982 | 3:-85139039 | MsG0380016559.01.T01:three_prime_UTR |
| TAATGACCAAAGTGAGAAAA+TGG | 0.293900 | 3:+85140592 | None:intergenic |
| TGTCCTGGTCTTACATCTCC+TGG | 0.329472 | 3:-85140300 | MsG0380016559.01.T01:CDS |
| GGGTGTTCTGGATGAGGAAG+TGG | 0.336037 | 3:-85140277 | MsG0380016559.01.T01:CDS |
| TGGTGCAATAAGATTTGTTT+TGG | 0.351364 | 3:-85140340 | MsG0380016559.01.T01:CDS |
| CGCTTATGATCCCTAAAATC+TGG | 0.363912 | 3:+85139261 | None:intergenic |
| AAACAAACCATTCTAGGAAA+TGG | 0.383543 | 3:-85140652 | MsG0380016559.01.T01:CDS |
| GTGTTCTGGATGAGGAAGTG+GGG | 0.404683 | 3:-85140275 | MsG0380016559.01.T01:CDS |
| TGGATCAAGTTCCAGAAAAC+AGG | 0.408316 | 3:+85139281 | None:intergenic |
| TTGATCTTTATTTGTTTGGT+AGG | 0.425564 | 3:-85139035 | MsG0380016559.01.T01:three_prime_UTR |
| GAGAGCCGCGATGCCAACTT+AGG | 0.431618 | 3:-85139312 | MsG0380016559.01.T01:CDS |
| GGTGTTCTGGATGAGGAAGT+GGG | 0.436303 | 3:-85140276 | MsG0380016559.01.T01:CDS |
| GTCCTGGTCTTACATCTCCT+GGG | 0.439119 | 3:-85140299 | MsG0380016559.01.T01:CDS |
| CCAAACAAATAAAGATCAAA+TGG | 0.446241 | 3:+85139039 | None:intergenic |
| ACAAGCCATTGTTATTGCCT+TGG | 0.448393 | 3:-85140620 | MsG0380016559.01.T01:CDS |
| TAACCTTGAGACGGAGGGAG+GGG | 0.460279 | 3:-85140677 | MsG0380016559.01.T01:CDS |
| GCGTGGTTCAGCCACTCAAT+AGG | 0.477544 | 3:+85139089 | None:intergenic |
| CACACAAGTTTATTCAAAGA+TGG | 0.478881 | 3:-85139067 | MsG0380016559.01.T01:three_prime_UTR |
| AAACAGCATGCCCTTGCCAT+TGG | 0.482054 | 3:-85140114 | MsG0380016559.01.T01:CDS |
| TTTCTCATTTCAGGCCATCA+TGG | 0.485619 | 3:-85140145 | MsG0380016559.01.T01:intron |
| AGCCATTGTTATTGCCTTGG+TGG | 0.490296 | 3:-85140617 | MsG0380016559.01.T01:CDS |
| TGTTCTGGATGAGGAAGTGG+GGG | 0.494533 | 3:-85140274 | MsG0380016559.01.T01:CDS |
| ATCTTTATTTGTTTGGTAGG+AGG | 0.499991 | 3:-85139032 | MsG0380016559.01.T01:three_prime_UTR |
| GTCTCAAGGTTATCTAAATG+TGG | 0.508635 | 3:+85140688 | None:intergenic |
| AGAGCCGCGATGCCAACTTA+GGG | 0.516621 | 3:-85139311 | MsG0380016559.01.T01:CDS |
| AACCTTGAGACGGAGGGAGG+GGG | 0.519159 | 3:-85140676 | MsG0380016559.01.T01:CDS |
| ACAAATAAAGATCAAATGGC+AGG | 0.523235 | 3:+85139043 | None:intergenic |
| ACAGGACTGCATCCCTAAGT+TGG | 0.534258 | 3:+85139299 | None:intergenic |
| CTCATGTAAACAGTAAAGAA+AGG | 0.535169 | 3:-85139216 | MsG0380016559.01.T01:three_prime_UTR |
| ATAACCTTGAGACGGAGGGA+GGG | 0.540998 | 3:-85140678 | MsG0380016559.01.T01:CDS |
| GATAACCTTGAGACGGAGGG+AGG | 0.552467 | 3:-85140679 | MsG0380016559.01.T01:CDS |
| TATGTAGTTTATGTAACTTG+TGG | 0.559412 | 3:-85139159 | MsG0380016559.01.T01:three_prime_UTR |
| ATGTAACTTGTGGAATACAC+TGG | 0.559588 | 3:-85139149 | MsG0380016559.01.T01:three_prime_UTR |
| GGTGCAAACATAATGTGTCC+TGG | 0.560571 | 3:-85140315 | MsG0380016559.01.T01:CDS |
| GAGTATAATAACAAACTAGC+AGG | 0.564179 | 3:+85139236 | None:intergenic |
| CAAACCATTCTAGGAAATGG+AGG | 0.565425 | 3:-85140649 | MsG0380016559.01.T01:CDS |
| TCCTGGTCTTACATCTCCTG+GGG | 0.566559 | 3:-85140298 | MsG0380016559.01.T01:CDS |
| TCTCAAGGTTATCTAAATGT+GGG | 0.570950 | 3:+85140689 | None:intergenic |
| AGTTCTGTACTCCTATTGAG+TGG | 0.595563 | 3:-85139100 | MsG0380016559.01.T01:three_prime_UTR |
| AAACCATTCTAGGAAATGGA+GGG | 0.605838 | 3:-85140648 | MsG0380016559.01.T01:CDS |
| TTTCAGGCCATCATGGCTGA+AGG | 0.607923 | 3:-85140138 | MsG0380016559.01.T01:intron |
| AACCATTCTAGGAAATGGAG+GGG | 0.608382 | 3:-85140647 | MsG0380016559.01.T01:CDS |
| TTTAGATAACCTTGAGACGG+AGG | 0.621520 | 3:-85140683 | MsG0380016559.01.T01:CDS |
| TTAGATAACCTTGAGACGGA+GGG | 0.629194 | 3:-85140682 | MsG0380016559.01.T01:CDS |
| CTCAAGGTTATCTAAATGTG+GGG | 0.631394 | 3:+85140690 | None:intergenic |
| ACATTTAGATAACCTTGAGA+CGG | 0.633992 | 3:-85140686 | MsG0380016559.01.T01:CDS |
| ACCATTCTAGGAAATGGAGG+GGG | 0.640643 | 3:-85140646 | MsG0380016559.01.T01:CDS |
| TTTGAATAAACTTGTGTGCG+TGG | 0.643292 | 3:+85139072 | None:intergenic |
| TGTAACTTGTGGAATACACT+GGG | 0.662827 | 3:-85139148 | MsG0380016559.01.T01:three_prime_UTR |
| AACCACCAAGGCAATAACAA+TGG | 0.670286 | 3:+85140615 | None:intergenic |
| CCTGGTCTTACATCTCCTGG+GGG | 0.695202 | 3:-85140297 | MsG0380016559.01.T01:CDS |
| GTGAGAAAATGGAACCACCA+AGG | 0.701057 | 3:+85140603 | None:intergenic |
| AAACAAATCTTATTGCACCA+CGG | 0.718835 | 3:+85140343 | None:intergenic |
| GCATCCCTAAGTTGGCATCG+CGG | 0.749002 | 3:+85139307 | None:intergenic |
| AAGAAATTACAAGTTGACCG+TGG | 0.749697 | 3:-85140360 | MsG0380016559.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGATAATTGATAAATTA+CGG | + | Chr3:85139172-85139191 | None:intergenic | 10.0% |
| !! | CTATAATATATTAAAATCAG+CGG | + | Chr3:85140300-85140319 | None:intergenic | 15.0% |
| !! | TAGAATAAAATAAGATTGTT+AGG | + | Chr3:85140323-85140342 | None:intergenic | 15.0% |
| !!! | ATTTTATTCTATATTGTAGA+TGG | - | Chr3:85140332-85140351 | MsG0380016559.01.T01:CDS | 15.0% |
| !! | AAATAAGTATACATACATAG+TGG | - | Chr3:85140166-85140185 | MsG0380016559.01.T01:intron | 20.0% |
| !! | CCATTAAAATTTATACTACA+TGG | + | Chr3:85139912-85139931 | None:intergenic | 20.0% |
| !! | TAATATGTACATGAATACAA+AGG | + | Chr3:85140147-85140166 | None:intergenic | 20.0% |
| !! | TGTAATTTCTTCATTATATC+TGG | + | Chr3:85139328-85139347 | None:intergenic | 20.0% |
| !! | TTGGATAGTATAACTTAATT+GGG | - | Chr3:85140263-85140282 | MsG0380016559.01.T01:CDS | 20.0% |
| !! | TTTGGATAGTATAACTTAAT+TGG | - | Chr3:85140262-85140281 | MsG0380016559.01.T01:CDS | 20.0% |
| !!! | CCATGTAGTATAAATTTTAA+TGG | - | Chr3:85139909-85139928 | MsG0380016559.01.T01:intron | 20.0% |
| !!! | CTTTTGTTTATTTGGAATTT+TGG | - | Chr3:85140244-85140263 | MsG0380016559.01.T01:intron | 20.0% |
| !!! | TCTTATCTCTTTTGTTTATT+TGG | - | Chr3:85140236-85140255 | MsG0380016559.01.T01:intron | 20.0% |
| ! | AAACAATCTACAAAACACAA+TGG | + | Chr3:85139469-85139488 | None:intergenic | 25.0% |
| ! | CCAAACAAATAAAGATCAAA+TGG | + | Chr3:85140661-85140680 | None:intergenic | 25.0% |
| ! | TAGAGATTAGAGATAAGATA+TGG | - | Chr3:85139969-85139988 | MsG0380016559.01.T01:intron | 25.0% |
| ! | TATGTAGTTTATGTAACTTG+TGG | - | Chr3:85140538-85140557 | MsG0380016559.01.T01:intron | 25.0% |
| ! | TGAGAAAAATACATGATATG+AGG | + | Chr3:85139539-85139558 | None:intergenic | 25.0% |
| !! | CCATTTGATCTTTATTTGTT+TGG | - | Chr3:85140658-85140677 | MsG0380016559.01.T01:CDS | 25.0% |
| !! | TCATGTATTTTTCTCATTTC+AGG | - | Chr3:85139543-85139562 | MsG0380016559.01.T01:intron | 25.0% |
| !! | TGACATTTTTGTAAATCCAA+TGG | + | Chr3:85139602-85139621 | None:intergenic | 25.0% |
| !! | TTGATCTTTATTTGTTTGGT+AGG | - | Chr3:85140662-85140681 | MsG0380016559.01.T01:CDS | 25.0% |
| !!! | CTTCCTACATTTTAAAAAAG+AGG | + | Chr3:85139145-85139164 | None:intergenic | 25.0% |
| AAACAAATCTTATTGCACCA+CGG | + | Chr3:85139357-85139376 | None:intergenic | 30.0% | |
| AAAGAGGCTCTTCATTTATT+TGG | + | Chr3:85139704-85139723 | None:intergenic | 30.0% | |
| AACTTGCATTATCTCAATGA+TGG | - | Chr3:85140090-85140109 | MsG0380016559.01.T01:CDS | 30.0% | |
| AAGAGGCTCTTCATTTATTT+GGG | + | Chr3:85139703-85139722 | None:intergenic | 30.0% | |
| AATAAAACATAGGGCTAATG+TGG | - | Chr3:85139943-85139962 | MsG0380016559.01.T01:intron | 30.0% | |
| ACAAATAAAGATCAAATGGC+AGG | + | Chr3:85140657-85140676 | None:intergenic | 30.0% | |
| ACATTTAGATAACCTTGAGA+CGG | - | Chr3:85139011-85139030 | MsG0380016559.01.T01:three_prime_UTR | 30.0% | |
| ATATTAAAATCAGCGGTAAC+TGG | + | Chr3:85140293-85140312 | None:intergenic | 30.0% | |
| ATTATCTCAATGATGGTCTT+TGG | - | Chr3:85140097-85140116 | MsG0380016559.01.T01:CDS | 30.0% | |
| CACACAAGTTTATTCAAAGA+TGG | - | Chr3:85140630-85140649 | MsG0380016559.01.T01:CDS | 30.0% | |
| CTCATGTAAACAGTAAAGAA+AGG | - | Chr3:85140481-85140500 | MsG0380016559.01.T01:intron | 30.0% | |
| GAGTATAATAACAAACTAGC+AGG | + | Chr3:85140464-85140483 | None:intergenic | 30.0% | |
| TAAAACATGGAAGAGTTTCT+AGG | - | Chr3:85139221-85139240 | MsG0380016559.01.T01:three_prime_UTR | 30.0% | |
| TAATGACCAAAGTGAGAAAA+TGG | + | Chr3:85139108-85139127 | None:intergenic | 30.0% | |
| TATACTACATGGCAATAAAG+TGG | + | Chr3:85139901-85139920 | None:intergenic | 30.0% | |
| TCTCAAGGTTATCTAAATGT+GGG | + | Chr3:85139011-85139030 | None:intergenic | 30.0% | |
| TTCAGAAAAGCAATCAACAA+GGG | - | Chr3:85140054-85140073 | MsG0380016559.01.T01:intron | 30.0% | |
| TTTAAAAAAGAGGACGAATG+CGG | + | Chr3:85139135-85139154 | None:intergenic | 30.0% | |
| TTTCAGAAAAGCAATCAACA+AGG | - | Chr3:85140053-85140072 | MsG0380016559.01.T01:intron | 30.0% | |
| ! | AAACAAACCATTCTAGGAAA+TGG | - | Chr3:85139045-85139064 | MsG0380016559.01.T01:three_prime_UTR | 30.0% |
| ! | ATCTTTATTTGTTTGGTAGG+AGG | - | Chr3:85140665-85140684 | MsG0380016559.01.T01:CDS | 30.0% |
| ! | GAAACTCTTCCATGTTTTAT+AGG | + | Chr3:85139220-85139239 | None:intergenic | 30.0% |
| ! | TAAAGTGGAAAACTTGTTTG+TGG | + | Chr3:85139886-85139905 | None:intergenic | 30.0% |
| ! | TTTTGTAAATCCAATGGCAA+GGG | + | Chr3:85139596-85139615 | None:intergenic | 30.0% |
| ! | TTTTTGTAAATCCAATGGCA+AGG | + | Chr3:85139597-85139616 | None:intergenic | 30.0% |
| !! | TGGTGCAATAAGATTTGTTT+TGG | - | Chr3:85139357-85139376 | MsG0380016559.01.T01:intron | 30.0% |
| !!! | CGTCCTCTTTTTTAAAATGT+AGG | - | Chr3:85139139-85139158 | MsG0380016559.01.T01:three_prime_UTR | 30.0% |
| !!! | TAGCCCTATGTTTTATTTGA+GGG | + | Chr3:85139940-85139959 | None:intergenic | 30.0% |
| !!! | TGCAATAAGATTTGTTTTGG+CGG | - | Chr3:85139360-85139379 | MsG0380016559.01.T01:intron | 30.0% |
| !!! | TTAGCCCTATGTTTTATTTG+AGG | + | Chr3:85139941-85139960 | None:intergenic | 30.0% |
| AAAGCAATCAACAAGGGAAT+TGG | - | Chr3:85140060-85140079 | MsG0380016559.01.T01:intron | 35.0% | |
| AAGAAGTTCAACTACTTTCG+TGG | - | Chr3:85140030-85140049 | MsG0380016559.01.T01:intron | 35.0% | |
| AAGCAATCAACAAGGGAATT+GGG | - | Chr3:85140061-85140080 | MsG0380016559.01.T01:intron | 35.0% | |
| AGCTCCCTCAAATAAAACAT+AGG | - | Chr3:85139933-85139952 | MsG0380016559.01.T01:intron | 35.0% | |
| CAATCATCGAAACTGAAACT+AGG | + | Chr3:85139999-85140018 | None:intergenic | 35.0% | |
| CTCAAGGTTATCTAAATGTG+GGG | + | Chr3:85139010-85139029 | None:intergenic | 35.0% | |
| GCTCCCTCAAATAAAACATA+GGG | - | Chr3:85139934-85139953 | MsG0380016559.01.T01:intron | 35.0% | |
| GTCTCAAGGTTATCTAAATG+TGG | + | Chr3:85139012-85139031 | None:intergenic | 35.0% | |
| TTTGAATAAACTTGTGTGCG+TGG | + | Chr3:85140628-85140647 | None:intergenic | 35.0% | |
| ! | AAACCATTCTAGGAAATGGA+GGG | - | Chr3:85139049-85139068 | MsG0380016559.01.T01:three_prime_UTR | 35.0% |
| ! | AAGAAATTACAAGTTGACCG+TGG | - | Chr3:85139337-85139356 | MsG0380016559.01.T01:CDS | 35.0% |
| ! | ATGTAACTTGTGGAATACAC+TGG | - | Chr3:85140548-85140567 | MsG0380016559.01.T01:intron | 35.0% |
| ! | ATGTCAACCAGAGAGTATAA+TGG | + | Chr3:85139745-85139764 | None:intergenic | 35.0% |
| ! | CCATGTTTTATAGGTGCTTT+TGG | + | Chr3:85139211-85139230 | None:intergenic | 35.0% |
| ! | GGAACTTGATCCAGATTTTA+GGG | - | Chr3:85140426-85140445 | MsG0380016559.01.T01:intron | 35.0% |
| ! | GTGCTTTTGGTCAAAGTATA+GGG | + | Chr3:85139198-85139217 | None:intergenic | 35.0% |
| ! | TGGAACTTGATCCAGATTTT+AGG | - | Chr3:85140425-85140444 | MsG0380016559.01.T01:intron | 35.0% |
| ! | TGTAACTTGTGGAATACACT+GGG | - | Chr3:85140549-85140568 | MsG0380016559.01.T01:intron | 35.0% |
| !! | CCAAAAGCACCTATAAAACA+TGG | - | Chr3:85139208-85139227 | MsG0380016559.01.T01:three_prime_UTR | 35.0% |
| !!! | GCAATAAGATTTGTTTTGGC+GGG | - | Chr3:85139361-85139380 | MsG0380016559.01.T01:intron | 35.0% |
| AACCACCAAGGCAATAACAA+TGG | + | Chr3:85139085-85139104 | None:intergenic | 40.0% | |
| AGAGATAAGAAAAGCCACGA+TGG | + | Chr3:85140226-85140245 | None:intergenic | 40.0% | |
| AGCAATCAACAAGGGAATTG+GGG | - | Chr3:85140062-85140081 | MsG0380016559.01.T01:intron | 40.0% | |
| AGTTCTGTACTCCTATTGAG+TGG | - | Chr3:85140597-85140616 | MsG0380016559.01.T01:intron | 40.0% | |
| CCTCTTACCATTATACTCTC+TGG | - | Chr3:85139735-85139754 | MsG0380016559.01.T01:intron | 40.0% | |
| CGCTTATGATCCCTAAAATC+TGG | + | Chr3:85140439-85140458 | None:intergenic | 40.0% | |
| TATTTGATGTGCTACCATCG+TGG | - | Chr3:85140209-85140228 | MsG0380016559.01.T01:intron | 40.0% | |
| TCTCAATGATGGTCTTTGGA+AGG | - | Chr3:85140101-85140120 | MsG0380016559.01.T01:CDS | 40.0% | |
| TGGATCAAGTTCCAGAAAAC+AGG | + | Chr3:85140419-85140438 | None:intergenic | 40.0% | |
| TTAGATAACCTTGAGACGGA+GGG | - | Chr3:85139015-85139034 | MsG0380016559.01.T01:three_prime_UTR | 40.0% | |
| TTTAGATAACCTTGAGACGG+AGG | - | Chr3:85139014-85139033 | MsG0380016559.01.T01:three_prime_UTR | 40.0% | |
| TTTCTCATTTCAGGCCATCA+TGG | - | Chr3:85139552-85139571 | MsG0380016559.01.T01:intron | 40.0% | |
| ! | AACCATTCTAGGAAATGGAG+GGG | - | Chr3:85139050-85139069 | MsG0380016559.01.T01:three_prime_UTR | 40.0% |
| ! | AACTTGTTTGTGGAAGGAAG+TGG | + | Chr3:85139876-85139895 | None:intergenic | 40.0% |
| ! | ACAAGCCATTGTTATTGCCT+TGG | - | Chr3:85139077-85139096 | MsG0380016559.01.T01:three_prime_UTR | 40.0% |
| ! | CAAACCATTCTAGGAAATGG+AGG | - | Chr3:85139048-85139067 | MsG0380016559.01.T01:three_prime_UTR | 40.0% |
| ! | CCAGAGAGTATAATGGTAAG+AGG | + | Chr3:85139738-85139757 | None:intergenic | 40.0% |
| ! | CTTTTGGTCAAAGTATAGGG+AGG | + | Chr3:85139195-85139214 | None:intergenic | 40.0% |
| ! | GGTGCTTTTGGTCAAAGTAT+AGG | + | Chr3:85139199-85139218 | None:intergenic | 40.0% |
| ! | GTGGAAAACTTGTTTGTGGA+AGG | + | Chr3:85139882-85139901 | None:intergenic | 40.0% |
| ! | GTGGTTCCATTTTCTCACTT+TGG | - | Chr3:85139099-85139118 | MsG0380016559.01.T01:three_prime_UTR | 40.0% |
| AAACACAATGGCAGTACCAC+AGG | + | Chr3:85139457-85139476 | None:intergenic | 45.0% | |
| AGAGGTGGAGCTACATGTTT+AGG | - | Chr3:85139839-85139858 | MsG0380016559.01.T01:intron | 45.0% | |
| CAGACATTATGCTCTGCAGT+TGG | - | Chr3:85139252-85139271 | MsG0380016559.01.T01:CDS | 45.0% | |
| GGGGGAAAACAAACCATTCT+AGG | - | Chr3:85139039-85139058 | MsG0380016559.01.T01:three_prime_UTR | 45.0% | |
| GGTGCAAACATAATGTGTCC+TGG | - | Chr3:85139382-85139401 | MsG0380016559.01.T01:intron | 45.0% | |
| GTGAGAAAATGGAACCACCA+AGG | + | Chr3:85139097-85139116 | None:intergenic | 45.0% | |
| GTGGAGCTACATGTTTAGGT+GGG | - | Chr3:85139843-85139862 | MsG0380016559.01.T01:intron | 45.0% | |
| TGGAGCTACATGTTTAGGTG+GGG | - | Chr3:85139844-85139863 | MsG0380016559.01.T01:intron | 45.0% | |
| ! | ACCATTCTAGGAAATGGAGG+GGG | - | Chr3:85139051-85139070 | MsG0380016559.01.T01:three_prime_UTR | 45.0% |
| ! | AGAGGCAGAGTTTCTGAAAG+AGG | + | Chr3:85139720-85139739 | None:intergenic | 45.0% |
| ! | AGCCATTGTTATTGCCTTGG+TGG | - | Chr3:85139080-85139099 | MsG0380016559.01.T01:three_prime_UTR | 45.0% |
| ! | CTGTTTTCCTTCAGCCATGA+TGG | + | Chr3:85139569-85139588 | None:intergenic | 45.0% |
| AAACAGCATGCCCTTGCCAT+TGG | - | Chr3:85139583-85139602 | MsG0380016559.01.T01:intron | 50.0% | |
| ACAGGACTGCATCCCTAAGT+TGG | + | Chr3:85140401-85140420 | None:intergenic | 50.0% | |
| ATAACCTTGAGACGGAGGGA+GGG | - | Chr3:85139019-85139038 | MsG0380016559.01.T01:three_prime_UTR | 50.0% | |
| CAACCTCGTGCAATTAGAGG+TGG | - | Chr3:85139824-85139843 | MsG0380016559.01.T01:intron | 50.0% | |
| CCACAACCTCGTGCAATTAG+AGG | - | Chr3:85139821-85139840 | MsG0380016559.01.T01:intron | 50.0% | |
| CCTCTAATTGCACGAGGTTG+TGG | + | Chr3:85139824-85139843 | None:intergenic | 50.0% | |
| GGAGCTACATGTTTAGGTGG+GGG | - | Chr3:85139845-85139864 | MsG0380016559.01.T01:intron | 50.0% | |
| GGTGGAGCTACATGTTTAGG+TGG | - | Chr3:85139842-85139861 | MsG0380016559.01.T01:intron | 50.0% | |
| TCCCCCTCCATTTCCTAGAA+TGG | + | Chr3:85139055-85139074 | None:intergenic | 50.0% | |
| TTTCAGGCCATCATGGCTGA+AGG | - | Chr3:85139559-85139578 | MsG0380016559.01.T01:intron | 50.0% | |
| ! | AGGGATGCAGTCCTGTTTTC+TGG | - | Chr3:85140405-85140424 | MsG0380016559.01.T01:intron | 50.0% |
| ! | GGTGTTCTGGATGAGGAAGT+GGG | - | Chr3:85139421-85139440 | MsG0380016559.01.T01:intron | 50.0% |
| ! | GTGTTCTGGATGAGGAAGTG+GGG | - | Chr3:85139422-85139441 | MsG0380016559.01.T01:intron | 50.0% |
| ! | TGTTCTGGATGAGGAAGTGG+GGG | - | Chr3:85139423-85139442 | MsG0380016559.01.T01:intron | 50.0% |
| !! | GTCCTGGTCTTACATCTCCT+GGG | - | Chr3:85139398-85139417 | MsG0380016559.01.T01:intron | 50.0% |
| !! | TCCTGGTCTTACATCTCCTG+GGG | - | Chr3:85139399-85139418 | MsG0380016559.01.T01:intron | 50.0% |
| !! | TGTCCTGGTCTTACATCTCC+TGG | - | Chr3:85139397-85139416 | MsG0380016559.01.T01:intron | 50.0% |
| AGAGCCGCGATGCCAACTTA+GGG | - | Chr3:85140386-85140405 | MsG0380016559.01.T01:intron | 55.0% | |
| GATAACCTTGAGACGGAGGG+AGG | - | Chr3:85139018-85139037 | MsG0380016559.01.T01:three_prime_UTR | 55.0% | |
| GCGTGGTTCAGCCACTCAAT+AGG | + | Chr3:85140611-85140630 | None:intergenic | 55.0% | |
| GCTCCACCTCTAATTGCACG+AGG | + | Chr3:85139830-85139849 | None:intergenic | 55.0% | |
| TAACCTTGAGACGGAGGGAG+GGG | - | Chr3:85139020-85139039 | MsG0380016559.01.T01:three_prime_UTR | 55.0% | |
| ! | GCATCCCTAAGTTGGCATCG+CGG | + | Chr3:85140393-85140412 | None:intergenic | 55.0% |
| ! | GGGTGTTCTGGATGAGGAAG+TGG | - | Chr3:85139420-85139439 | MsG0380016559.01.T01:intron | 55.0% |
| !! | CCTGGTCTTACATCTCCTGG+GGG | - | Chr3:85139400-85139419 | MsG0380016559.01.T01:intron | 55.0% |
| !! | TACATCTCCTGGGGGTGTTC+TGG | - | Chr3:85139408-85139427 | MsG0380016559.01.T01:intron | 55.0% |
| AACCTTGAGACGGAGGGAGG+GGG | - | Chr3:85139021-85139040 | MsG0380016559.01.T01:three_prime_UTR | 60.0% | |
| AGTGGGGGCAGAATGTCCTG+TGG | - | Chr3:85139438-85139457 | MsG0380016559.01.T01:intron | 60.0% | |
| CCCCCAGGAGATGTAAGACC+AGG | + | Chr3:85139403-85139422 | None:intergenic | 60.0% | |
| GAGAGCCGCGATGCCAACTT+AGG | - | Chr3:85140385-85140404 | MsG0380016559.01.T01:intron | 60.0% | |
| TCCTCATCCAGAACACCCCC+AGG | + | Chr3:85139418-85139437 | None:intergenic | 60.0% | |
| !! | TCCTGGGGGTGTTCTGGATG+AGG | - | Chr3:85139414-85139433 | MsG0380016559.01.T01:intron | 60.0% |
| TTCCCCCTCCCTCCGTCTCA+AGG | + | Chr3:85139026-85139045 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 85138982 | 85140737 | 85138982 | ID=MsG0380016559.01;Name=MsG0380016559.01 |
| Chr3 | mRNA | 85138982 | 85140737 | 85138982 | ID=MsG0380016559.01.T01;Parent=MsG0380016559.01;Name=MsG0380016559.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.33|0.75|1|1|1|4|269|153 |
| Chr3 | exon | 85138982 | 85139368 | 85138982 | ID=MsG0380016559.01.T01:exon:11279;Parent=MsG0380016559.01.T01 |
| Chr3 | exon | 85140087 | 85140154 | 85140087 | ID=MsG0380016559.01.T01:exon:11278;Parent=MsG0380016559.01.T01 |
| Chr3 | exon | 85140260 | 85140396 | 85140260 | ID=MsG0380016559.01.T01:exon:11277;Parent=MsG0380016559.01.T01 |
| Chr3 | exon | 85140599 | 85140737 | 85140599 | ID=MsG0380016559.01.T01:exon:11276;Parent=MsG0380016559.01.T01 |
| Chr3 | CDS | 85140599 | 85140737 | 85140599 | ID=MsG0380016559.01.T01:cds;Parent=MsG0380016559.01.T01 |
| Chr3 | CDS | 85140260 | 85140396 | 85140260 | ID=MsG0380016559.01.T01:cds;Parent=MsG0380016559.01.T01 |
| Chr3 | CDS | 85140087 | 85140154 | 85140087 | ID=MsG0380016559.01.T01:cds;Parent=MsG0380016559.01.T01 |
| Chr3 | CDS | 85139251 | 85139368 | 85139251 | ID=MsG0380016559.01.T01:cds;Parent=MsG0380016559.01.T01 |
| Chr3 | three_prime_UTR | 85138982 | 85139250 | 85138982 | ID=MsG0380016559.01.T01:three_prime_utr;Parent=MsG0380016559.01.T01 |
| Gene Sequence |
| Protein sequence |
