Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046631.01.T01 | XP_003609172.1 | 75.949 | 158 | 20 | 4 | 1 | 145 | 1 | 153 | 4.21E-62 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046631.01.T01 | Q9LEY9 | 51.899 | 158 | 61 | 4 | 1 | 145 | 1 | 156 | 1.40E-46 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046631.01.T01 | G7JT47 | 75.949 | 158 | 20 | 4 | 1 | 145 | 1 | 153 | 2.01e-62 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047940.01 | MsG0880046631.01 | 0.813789 | 2.143044e-51 | 1.412855e-48 |
| MsG0080048113.01 | MsG0880046631.01 | 0.813024 | 3.155175e-51 | 2.037387e-48 |
| MsG0080048135.01 | MsG0880046631.01 | 0.839472 | 1.552483e-57 | 2.146224e-54 |
| MsG0080048856.01 | MsG0880046631.01 | 0.809112 | 2.222612e-50 | 1.293684e-47 |
| MsG0180000139.01 | MsG0880046631.01 | 0.876998 | 8.936929e-69 | 4.422456e-65 |
| MsG0180000209.01 | MsG0880046631.01 | 0.824173 | 9.316142e-54 | 8.189833e-51 |
| MsG0180000339.01 | MsG0880046631.01 | 0.834925 | 2.260338e-56 | 2.721933e-53 |
| MsG0180000575.01 | MsG0880046631.01 | 0.865949 | 4.074567e-65 | 1.349759e-61 |
| MsG0180000614.01 | MsG0880046631.01 | 0.819699 | 1.012386e-52 | 7.847617e-50 |
| MsG0180000743.01 | MsG0880046631.01 | 0.852398 | 4.738550e-61 | 9.888500e-58 |
| MsG0180001141.01 | MsG0880046631.01 | 0.821632 | 3.641284e-53 | 2.978484e-50 |
| MsG0180001886.01 | MsG0880046631.01 | 0.837850 | 4.074949e-57 | 5.361255e-54 |
| MsG0180002458.01 | MsG0880046631.01 | 0.849287 | 3.563351e-60 | 6.722737e-57 |
| MsG0180002547.01 | MsG0880046631.01 | 0.835776 | 1.377835e-56 | 1.702027e-53 |
| MsG0880045145.01 | MsG0880046631.01 | 0.851719 | 7.387990e-61 | 1.508933e-57 |
| MsG0880045535.01 | MsG0880046631.01 | 0.814164 | 1.771123e-51 | 1.179595e-48 |
| MsG0880046321.01 | MsG0880046631.01 | 0.805240 | 1.468340e-49 | 7.728853e-47 |
| MsG0880046458.01 | MsG0880046631.01 | 0.843994 | 9.945117e-59 | 1.583412e-55 |
| MsG0880046575.01 | MsG0880046631.01 | 0.853276 | 2.659846e-61 | 5.716062e-58 |
| MsG0880046631.01 | MsG0880047427.01 | 0.893841 | 4.316664e-75 | 4.185689e-71 |
| MsG0880046631.01 | MsG0880047472.01 | 0.809955 | 1.465168e-50 | 8.721043e-48 |
| MsG0880046631.01 | MsG0880047473.01 | 0.811244 | 7.714262e-51 | 4.750698e-48 |
| MsG0880046631.01 | MsG0880047764.01 | 0.817607 | 3.021080e-52 | 2.210288e-49 |
| MsG0180003793.01 | MsG0880046631.01 | 0.810296 | 1.236659e-50 | 7.426281e-48 |
| MsG0180004129.01 | MsG0880046631.01 | 0.816904 | 4.348724e-52 | 3.120943e-49 |
| MsG0180004130.01 | MsG0880046631.01 | 0.829963 | 3.836363e-55 | 3.986807e-52 |
| MsG0180004152.01 | MsG0880046631.01 | 0.870856 | 1.063158e-66 | 4.199042e-63 |
| MsG0180004481.01 | MsG0880046631.01 | 0.886169 | 4.321741e-72 | 3.053554e-68 |
| MsG0180004482.01 | MsG0880046631.01 | 0.869181 | 3.753107e-66 | 1.395555e-62 |
| MsG0180004509.01 | MsG0880046631.01 | 0.918177 | 2.149457e-86 | 6.456895e-82 |
| MsG0180004854.01 | MsG0880046631.01 | 0.811081 | 8.367070e-51 | 5.130782e-48 |
| MsG0180004928.01 | MsG0880046631.01 | 0.817156 | 3.816552e-52 | 2.758050e-49 |
| MsG0180005439.01 | MsG0880046631.01 | 0.818248 | 2.164485e-52 | 1.611637e-49 |
| MsG0180005659.01 | MsG0880046631.01 | 0.832119 | 1.133903e-55 | 1.255402e-52 |
| MsG0180005851.01 | MsG0880046631.01 | 0.814928 | 1.199685e-51 | 8.156580e-49 |
| MsG0180005957.01 | MsG0880046631.01 | 0.803444 | 3.475531e-49 | 1.746817e-46 |
| MsG0180005993.01 | MsG0880046631.01 | 0.823267 | 1.518916e-53 | 1.301485e-50 |
| MsG0180006013.01 | MsG0880046631.01 | 0.821567 | 3.768988e-53 | 3.077404e-50 |
| MsG0180006024.01 | MsG0880046631.01 | 0.813086 | 3.058676e-51 | 1.978280e-48 |
| MsG0180006082.01 | MsG0880046631.01 | 0.830614 | 2.660078e-55 | 2.817085e-52 |
| MsG0280006405.01 | MsG0880046631.01 | 0.809474 | 1.858408e-50 | 1.092163e-47 |
| MsG0280006406.01 | MsG0880046631.01 | 0.820816 | 5.615226e-53 | 4.490001e-50 |
| MsG0280006422.01 | MsG0880046631.01 | 0.833246 | 5.954121e-56 | 6.817671e-53 |
| MsG0280006424.01 | MsG0880046631.01 | 0.833766 | 4.416855e-56 | 5.136965e-53 |
| MsG0780040384.01 | MsG0880046631.01 | 0.841963 | 3.453692e-58 | 5.158632e-55 |
| MsG0780040545.01 | MsG0880046631.01 | 0.808692 | 2.733963e-50 | 1.573541e-47 |
| MsG0780040841.01 | MsG0880046631.01 | 0.819564 | 1.086981e-52 | 8.394261e-50 |
| MsG0780041137.01 | MsG0880046631.01 | 0.812362 | 4.403946e-51 | 2.794529e-48 |
| MsG0780041224.01 | MsG0880046631.01 | 0.835546 | 1.575741e-56 | 1.933032e-53 |
| MsG0780041295.01 | MsG0880046631.01 | 0.809150 | 2.181730e-50 | 1.271170e-47 |
| MsG0780041392.01 | MsG0880046631.01 | 0.821943 | 3.086465e-53 | 2.547046e-50 |
| MsG0780041402.01 | MsG0880046631.01 | 0.826153 | 3.171238e-54 | 2.949979e-51 |
| MsG0780041462.01 | MsG0880046631.01 | 0.924914 | 3.723922e-90 | 1.613527e-85 |
| MsG0780041559.01 | MsG0880046631.01 | 0.811676 | 6.214737e-51 | 3.870887e-48 |
| MsG0880042108.01 | MsG0880046631.01 | 0.802859 | 4.594277e-49 | 2.274760e-46 |
| MsG0880042519.01 | MsG0880046631.01 | 0.829109 | 6.185935e-55 | 6.270203e-52 |
| MsG0880042779.01 | MsG0880046631.01 | 0.807202 | 5.670855e-50 | 3.139309e-47 |
| MsG0280010776.01 | MsG0880046631.01 | 0.825554 | 4.400165e-54 | 4.023848e-51 |
| MsG0280010778.01 | MsG0880046631.01 | 0.825337 | 4.952987e-54 | 4.501705e-51 |
| MsG0280010980.01 | MsG0880046631.01 | 0.813305 | 2.738031e-51 | 1.781564e-48 |
| MsG0280011003.01 | MsG0880046631.01 | 0.810665 | 1.029659e-50 | 6.244610e-48 |
| MsG0280011141.01 | MsG0880046631.01 | 0.801388 | 9.218429e-49 | 4.396820e-46 |
| MsG0280011387.01 | MsG0880046631.01 | 0.840368 | 9.069888e-58 | 1.289176e-54 |
| MsG0380011659.01 | MsG0880046631.01 | 0.813674 | 2.270699e-51 | 1.492431e-48 |
| MsG0380012566.01 | MsG0880046631.01 | 0.822437 | 2.370602e-53 | 1.984192e-50 |
| MsG0380013178.01 | MsG0880046631.01 | 0.867464 | 1.342058e-65 | 4.690211e-62 |
| MsG0380014173.01 | MsG0880046631.01 | 0.837749 | 4.326785e-57 | 5.675079e-54 |
| MsG0380014644.01 | MsG0880046631.01 | 0.830158 | 3.437303e-55 | 3.592350e-52 |
| MsG0380014647.01 | MsG0880046631.01 | 0.812050 | 5.151292e-51 | 3.241014e-48 |
| MsG0380014703.01 | MsG0880046631.01 | 0.803388 | 3.570532e-49 | 1.791923e-46 |
| MsG0680030882.01 | MsG0880046631.01 | 0.814815 | 1.270928e-51 | 8.615028e-49 |
| MsG0680031507.01 | MsG0880046631.01 | 0.806358 | 8.550464e-50 | 4.631391e-47 |
| MsG0680031628.01 | MsG0880046631.01 | 0.843906 | 1.050057e-58 | 1.667409e-55 |
| MsG0480018477.01 | MsG0880046631.01 | 0.825722 | 4.013810e-54 | 3.688278e-51 |
| MsG0480019416.01 | MsG0880046631.01 | 0.807749 | 4.342597e-50 | 2.438412e-47 |
| MsG0480020959.01 | MsG0880046631.01 | 0.807880 | 4.071690e-50 | 2.294041e-47 |
| MsG0480021006.01 | MsG0880046631.01 | 0.821807 | 3.317145e-53 | 2.727052e-50 |
| MsG0480021215.01 | MsG0880046631.01 | 0.802183 | 6.331284e-49 | 3.081189e-46 |
| MsG0480021448.01 | MsG0880046631.01 | 0.802897 | 4.510953e-49 | 2.235725e-46 |
| MsG0480021451.01 | MsG0880046631.01 | 0.859489 | 3.993077e-63 | 1.056418e-59 |
| MsG0480021452.01 | MsG0880046631.01 | 0.805463 | 1.318883e-49 | 6.982243e-47 |
| MsG0480021453.01 | MsG0880046631.01 | 0.840873 | 6.687960e-58 | 9.656115e-55 |
| MsG0480021465.01 | MsG0880046631.01 | 0.837790 | 4.221072e-57 | 5.543505e-54 |
| MsG0480021750.01 | MsG0880046631.01 | 0.850897 | 1.261581e-60 | 2.508592e-57 |
| MsG0480021994.01 | MsG0880046631.01 | 0.837305 | 5.622926e-57 | 7.273741e-54 |
| MsG0480022164.01 | MsG0880046631.01 | 0.846175 | 2.561363e-59 | 4.371101e-56 |
| MsG0480022223.01 | MsG0880046631.01 | 0.839639 | 1.404669e-57 | 1.951786e-54 |
| MsG0480022696.01 | MsG0880046631.01 | 0.852804 | 3.630285e-61 | 7.678278e-58 |
| MsG0480022711.01 | MsG0880046631.01 | 0.877318 | 6.920399e-69 | 3.464799e-65 |
| MsG0480022795.01 | MsG0880046631.01 | 0.856757 | 2.592292e-62 | 6.251505e-59 |
| MsG0480022836.01 | MsG0880046631.01 | 0.802808 | 4.705862e-49 | 2.327124e-46 |
| MsG0480022913.01 | MsG0880046631.01 | 0.805604 | 1.232146e-49 | 6.546371e-47 |
| MsG0480023221.01 | MsG0880046631.01 | 0.800298 | 1.538771e-48 | 7.139916e-46 |
| MsG0480023399.01 | MsG0880046631.01 | 0.813709 | 2.231114e-51 | 1.467827e-48 |
| MsG0480023968.01 | MsG0880046631.01 | 0.833044 | 6.684483e-56 | 7.608559e-53 |
| MsG0580024036.01 | MsG0880046631.01 | 0.818465 | 1.932885e-52 | 1.448038e-49 |
| MsG0580024197.01 | MsG0880046631.01 | 0.853139 | 2.911571e-61 | 6.227436e-58 |
| MsG0580024390.01 | MsG0880046631.01 | 0.878956 | 1.845335e-69 | 9.823728e-66 |
| MsG0580024754.01 | MsG0880046631.01 | 0.851323 | 9.563158e-61 | 1.928676e-57 |
| MsG0580024961.01 | MsG0880046631.01 | 0.810339 | 1.210585e-50 | 7.278026e-48 |
| MsG0580025421.01 | MsG0880046631.01 | 0.814524 | 1.474930e-51 | 9.919964e-49 |
| MsG0580025587.01 | MsG0880046631.01 | 0.825136 | 5.526444e-54 | 4.994421e-51 |
| MsG0580025756.01 | MsG0880046631.01 | 0.818641 | 1.762596e-52 | 1.326733e-49 |
| MsG0380015027.01 | MsG0880046631.01 | 0.828492 | 8.726125e-55 | 8.687322e-52 |
| MsG0380015164.01 | MsG0880046631.01 | 0.831586 | 1.535107e-55 | 1.673320e-52 |
| MsG0380015440.01 | MsG0880046631.01 | 0.802577 | 5.251478e-49 | 2.581504e-46 |
| MsG0380016067.01 | MsG0880046631.01 | 0.869291 | 3.457305e-66 | 1.290555e-62 |
| MsG0380016559.01 | MsG0880046631.01 | 0.819104 | 1.383861e-52 | 1.055118e-49 |
| MsG0380016560.01 | MsG0880046631.01 | 0.816680 | 4.881993e-52 | 3.482131e-49 |
| MsG0380016860.01 | MsG0880046631.01 | 0.860950 | 1.444420e-63 | 4.018352e-60 |
| MsG0380016970.01 | MsG0880046631.01 | 0.803968 | 2.705801e-49 | 1.378425e-46 |
| MsG0380017238.01 | MsG0880046631.01 | 0.809251 | 2.075077e-50 | 1.212323e-47 |
| MsG0380017369.01 | MsG0880046631.01 | 0.814716 | 1.337427e-51 | 9.041565e-49 |
| MsG0380017382.01 | MsG0880046631.01 | 0.855999 | 4.325129e-62 | 1.017360e-58 |
| MsG0480018110.01 | MsG0880046631.01 | 0.801157 | 1.028117e-48 | 4.875347e-46 |
| MsG0480018163.01 | MsG0880046631.01 | 0.817369 | 3.417498e-52 | 2.484118e-49 |
| MsG0580027361.01 | MsG0880046631.01 | 0.823665 | 1.225919e-53 | 1.062435e-50 |
| MsG0580027615.01 | MsG0880046631.01 | 0.802037 | 6.785644e-49 | 3.290101e-46 |
| MsG0680030320.01 | MsG0880046631.01 | 0.806373 | 8.489419e-50 | 4.600155e-47 |
| MsG0280006593.01 | MsG0880046631.01 | 0.816808 | 4.568125e-52 | 3.269816e-49 |
| MsG0280006678.01 | MsG0880046631.01 | 0.824659 | 7.161046e-54 | 6.384290e-51 |
| MsG0280006993.01 | MsG0880046631.01 | 0.857727 | 1.340490e-62 | 3.340745e-59 |
| MsG0280007222.01 | MsG0880046631.01 | 0.834819 | 2.404172e-56 | 2.885735e-53 |
| MsG0280007527.01 | MsG0880046631.01 | 0.817256 | 3.624241e-52 | 2.626133e-49 |
| MsG0280008696.01 | MsG0880046631.01 | 0.802291 | 6.013972e-49 | 2.935042e-46 |
| MsG0280009575.01 | MsG0880046631.01 | 0.802373 | 5.786343e-49 | 2.829884e-46 |
| MsG0280009716.01 | MsG0880046631.01 | 0.806902 | 6.565497e-50 | 3.606250e-47 |
| MsG0280010233.01 | MsG0880046631.01 | 0.819184 | 1.326964e-52 | 1.013936e-49 |
| MsG0280010383.01 | MsG0880046631.01 | 0.835087 | 2.058124e-56 | 2.490148e-53 |
| MsG0280010434.01 | MsG0880046631.01 | 0.817089 | 3.950993e-52 | 2.849912e-49 |
| MsG0780036146.01 | MsG0880046631.01 | 0.817907 | 2.585333e-52 | 1.907055e-49 |
| MsG0780036240.01 | MsG0880046631.01 | 0.809158 | 2.172245e-50 | 1.265943e-47 |
| MsG0780036546.01 | MsG0880046631.01 | 0.817725 | 2.841368e-52 | 2.085653e-49 |
| MsG0780037240.01 | MsG0880046631.01 | 0.805007 | 1.643009e-49 | 8.596702e-47 |
| MsG0780038400.01 | MsG0880046631.01 | 0.839417 | 1.604890e-57 | 2.214922e-54 |
| MsG0780039844.01 | MsG0880046631.01 | 0.858321 | 8.923605e-63 | 2.268627e-59 |
| MsG0780040057.01 | MsG0880046631.01 | 0.820095 | 8.220662e-53 | 6.443824e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046631.01.T01 | MTR_4g112780 | 75.949 | 158 | 20 | 4 | 1 | 145 | 1 | 153 | 5.10e-66 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046631.01.T01 | AT5G08180 | 51.899 | 158 | 61 | 4 | 1 | 145 | 1 | 156 | 1.43e-47 | 151 |
| MsG0880046631.01.T01 | AT5G08180 | 51.899 | 158 | 61 | 4 | 1 | 145 | 1 | 156 | 1.43e-47 | 151 |
Find 25 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACAATGGATTAACATAT+TGG | 0.284643 | 8:-75951170 | MsG0880046631.01.T01:three_prime_UTR |
| CCCATTGCAAAACCTCTTGC+TGG | 0.348880 | 8:-75953211 | MsG0880046631.01.T01:CDS |
| TGAGATAGTTCACCCTTTGA+AGG | 0.372203 | 8:+75951303 | None:intergenic |
| CGCAGAGTGTGTATTATAGC+TGG | 0.392404 | 8:-75952152 | MsG0880046631.01.T01:intron |
| TAGTTCACCCTTTGAAGGCT+TGG | 0.444404 | 8:+75951308 | None:intergenic |
| ACATGAGTGATGACATCAAT+AGG | 0.449731 | 8:+75952119 | None:intergenic |
| TCCTTATCCTCACATAAAAT+CGG | 0.452854 | 8:+75952095 | None:intergenic |
| TTAGATGAGACATATACATA+TGG | 0.460404 | 8:+75952068 | None:intergenic |
| GTCCAGGACCTTGCAACGGC+AGG | 0.468819 | 8:-75951368 | MsG0880046631.01.T01:intron |
| CGACAGTGAAGGTGAGAAAT+CGG | 0.483487 | 8:-75953275 | MsG0880046631.01.T01:CDS |
| GTGATGACCAAGCCTTCAAA+GGG | 0.500756 | 8:-75951315 | MsG0880046631.01.T01:CDS |
| TCGTTGCTCCTGCCGTTGCA+AGG | 0.501816 | 8:+75951360 | None:intergenic |
| AGTGATGACCAAGCCTTCAA+AGG | 0.525648 | 8:-75951316 | MsG0880046631.01.T01:CDS |
| ACACTCAAGCTTGTTAAAAG+AGG | 0.527156 | 8:-75953169 | MsG0880046631.01.T01:CDS |
| CGGTGCAGAGGGAGAAGGAG+AGG | 0.549279 | 8:-75953255 | MsG0880046631.01.T01:CDS |
| GAAAGCTTCTTTCCAGCAAG+AGG | 0.560382 | 8:+75953199 | None:intergenic |
| GAAGGAGAGGAAGAAGATGC+AGG | 0.571568 | 8:-75953242 | MsG0880046631.01.T01:CDS |
| GAAATCGGTGCAGAGGGAGA+AGG | 0.585599 | 8:-75953260 | MsG0880046631.01.T01:CDS |
| AAGGTGAGAAATCGGTGCAG+AGG | 0.589190 | 8:-75953267 | MsG0880046631.01.T01:CDS |
| GCAGAGTGTGTATTATAGCT+GGG | 0.592201 | 8:-75952151 | MsG0880046631.01.T01:intron |
| AGGTGAGAAATCGGTGCAGA+GGG | 0.594395 | 8:-75953266 | MsG0880046631.01.T01:CDS |
| CATCACTAAAACACAACAAG+TGG | 0.604554 | 8:+75951332 | None:intergenic |
| AAAGGGTGAACTATCTCAAG+AGG | 0.620179 | 8:-75951298 | MsG0880046631.01.T01:CDS |
| ATTTGTCCAGGACCTTGCAA+CGG | 0.636321 | 8:-75951372 | MsG0880046631.01.T01:intron |
| GAAATGGGAAGCGACAGTGA+AGG | 0.681973 | 8:-75953286 | MsG0880046631.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTGAAACATAAAAAAT+GGG | + | Chr8:75952167-75952186 | None:intergenic | 15.0% |
| !! | ATTCCAAAAAAAAGAAAAAA+CGG | + | Chr8:75951824-75951843 | None:intergenic | 15.0% |
| !! | TTATAAGCTATAAACTATAT+TGG | - | Chr8:75951584-75951603 | MsG0880046631.01.T01:intron | 15.0% |
| !! | ATAGCTTATAAAAACAACTT+AGG | + | Chr8:75951575-75951594 | None:intergenic | 20.0% |
| !! | ATTCATAACATAACATTCTT+GGG | + | Chr8:75951736-75951755 | None:intergenic | 20.0% |
| !! | CACAATTGAAACATAAAAAA+TGG | + | Chr8:75952168-75952187 | None:intergenic | 20.0% |
| !! | CTATTGTATTCATAATATAC+AGG | + | Chr8:75952749-75952768 | None:intergenic | 20.0% |
| !! | GAATTGTTGATATATTATGT+AGG | + | Chr8:75952820-75952839 | None:intergenic | 20.0% |
| !! | TACATAAATCTTTGTCTTAT+GGG | - | Chr8:75951916-75951935 | MsG0880046631.01.T01:intron | 20.0% |
| !! | TCATAAATAACTAAAAGTTG+AGG | - | Chr8:75952486-75952505 | MsG0880046631.01.T01:intron | 20.0% |
| !! | TTACATAAATCTTTGTCTTA+TGG | - | Chr8:75951915-75951934 | MsG0880046631.01.T01:intron | 20.0% |
| !! | TTCCATTCAAATATGTTATA+TGG | + | Chr8:75952610-75952629 | None:intergenic | 20.0% |
| !!! | AAATGTATTTGTACTGTTTT+TGG | - | Chr8:75953188-75953207 | MsG0880046631.01.T01:CDS | 20.0% |
| !!! | CATTTTTTATGTTTCAATTG+TGG | - | Chr8:75952166-75952185 | MsG0880046631.01.T01:intron | 20.0% |
| !!! | GTTTTTTCTTTTTTTTGGAA+TGG | - | Chr8:75951823-75951842 | MsG0880046631.01.T01:intron | 20.0% |
| !!! | TAATGAAAATCGTTAATTTG+TGG | - | Chr8:75951271-75951290 | MsG0880046631.01.T01:CDS | 20.0% |
| !!! | TGTTGATTCTGTAATTAAAA+AGG | - | Chr8:75951858-75951877 | MsG0880046631.01.T01:intron | 20.0% |
| !!! | TTTCAGTTTCGTTTTAAATA+TGG | - | Chr8:75952852-75952871 | MsG0880046631.01.T01:intron | 20.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | Chr8:75951451-75951470 | None:intergenic | 25.0% |
| ! | ATATGGTATTAAGAGAAACA+TGG | - | Chr8:75952869-75952888 | MsG0880046631.01.T01:intron | 25.0% |
| ! | ATTTATCTTCCTTGACAAAA+TGG | - | Chr8:75952114-75952133 | MsG0880046631.01.T01:CDS | 25.0% |
| ! | GATTCATAACATAACATTCT+TGG | + | Chr8:75951737-75951756 | None:intergenic | 25.0% |
| ! | GTCCATATAACATATTTGAA+TGG | - | Chr8:75952605-75952624 | MsG0880046631.01.T01:intron | 25.0% |
| ! | TTAGATGAGACATATACATA+TGG | + | Chr8:75952315-75952334 | None:intergenic | 25.0% |
| !! | CTTATTCTAAAGAGAGATTA+GGG | + | Chr8:75952412-75952431 | None:intergenic | 25.0% |
| !! | TACATTTTGTAAGTCTGTTT+TGG | + | Chr8:75951675-75951694 | None:intergenic | 25.0% |
| !! | TCTTATTCTAAAGAGAGATT+AGG | + | Chr8:75952413-75952432 | None:intergenic | 25.0% |
| !! | TTTCAAAGTACTAGAGTAAT+TGG | + | Chr8:75952964-75952983 | None:intergenic | 25.0% |
| !!! | AATTTTTGAGATATTTGTCC+AGG | - | Chr8:75952996-75953015 | MsG0880046631.01.T01:intron | 25.0% |
| !!! | ATGAACTTGTTATGGAATTA+AGG | - | Chr8:75951424-75951443 | MsG0880046631.01.T01:intron | 25.0% |
| !!! | CTTCAAAAATGAACTTGTTA+TGG | - | Chr8:75951416-75951435 | MsG0880046631.01.T01:intron | 25.0% |
| !!! | TGAACTTGTTATGGAATTAA+GGG | - | Chr8:75951425-75951444 | MsG0880046631.01.T01:intron | 25.0% |
| AAATCTGCTATGCAATCATT+TGG | - | Chr8:75952914-75952933 | MsG0880046631.01.T01:intron | 30.0% | |
| AACATTAGATTGCTCACAAA+GGG | - | Chr8:75952053-75952072 | MsG0880046631.01.T01:intron | 30.0% | |
| ACAATTTGTGTTATGAATGC+CGG | + | Chr8:75952570-75952589 | None:intergenic | 30.0% | |
| ATGGTAAAAAGACAGCAAAA+AGG | + | Chr8:75951789-75951808 | None:intergenic | 30.0% | |
| GAGAAGAAGGCAAAAAATAA+GGG | + | Chr8:75952206-75952225 | None:intergenic | 30.0% | |
| TAACATTAGATTGCTCACAA+AGG | - | Chr8:75952052-75952071 | MsG0880046631.01.T01:intron | 30.0% | |
| TATGACATCAAATTAACCTC+AGG | + | Chr8:75952471-75952490 | None:intergenic | 30.0% | |
| TCCTTATCCTCACATAAAAT+CGG | + | Chr8:75952288-75952307 | None:intergenic | 30.0% | |
| TGAGAAGAAGGCAAAAAATA+AGG | + | Chr8:75952207-75952226 | None:intergenic | 30.0% | |
| ! | ATAACACAAATTGTGTTGAC+AGG | - | Chr8:75952576-75952595 | MsG0880046631.01.T01:intron | 30.0% |
| ! | GAATGTATGCTTTTCTATAC+TGG | - | Chr8:75952627-75952646 | MsG0880046631.01.T01:intron | 30.0% |
| ! | GCTTGAATGTTTTGTCAATT+TGG | - | Chr8:75951891-75951910 | MsG0880046631.01.T01:intron | 30.0% |
| !! | CTTGCAATCATTTTGATCTA+TGG | - | Chr8:75953241-75953260 | MsG0880046631.01.T01:CDS | 30.0% |
| !! | GCTACAATGGATTAACATAT+TGG | - | Chr8:75953210-75953229 | MsG0880046631.01.T01:CDS | 30.0% |
| !!! | CTGCCGTTTTTTCTTTTTTT+TGG | - | Chr8:75951818-75951837 | MsG0880046631.01.T01:intron | 30.0% |
| AAAACGGCAGCAAATTTGTA+TGG | + | Chr8:75951808-75951827 | None:intergenic | 35.0% | |
| ACATGAGTGATGACATCAAT+AGG | + | Chr8:75952264-75952283 | None:intergenic | 35.0% | |
| AGCACTCAAGTTACAAAACA+AGG | + | Chr8:75952537-75952556 | None:intergenic | 35.0% | |
| CACAGTTTATCGAGAAAGAA+AGG | - | Chr8:75952775-75952794 | MsG0880046631.01.T01:intron | 35.0% | |
| CATCACTAAAACACAACAAG+TGG | + | Chr8:75953051-75953070 | None:intergenic | 35.0% | |
| CTTGACAAAATGGTTACTCA+AGG | - | Chr8:75952124-75952143 | MsG0880046631.01.T01:CDS | 35.0% | |
| GAAAACAAGTGCATAAAGAG+AGG | - | Chr8:75951974-75951993 | MsG0880046631.01.T01:intron | 35.0% | |
| GGAGAGTTCTTGAAAATAAG+TGG | - | Chr8:75951605-75951624 | MsG0880046631.01.T01:intron | 35.0% | |
| TAAAGAGAGATTAGGGAAAC+AGG | + | Chr8:75952405-75952424 | None:intergenic | 35.0% | |
| TAATATACAGGTCTATGAGC+TGG | + | Chr8:75952737-75952756 | None:intergenic | 35.0% | |
| TCTATGAGCTGGATTATAGA+TGG | + | Chr8:75952726-75952745 | None:intergenic | 35.0% | |
| TGAAATAAGCCAATCCAAAC+TGG | - | Chr8:75951710-75951729 | MsG0880046631.01.T01:intron | 35.0% | |
| TTTCTTACACATATAGCCTG+AGG | - | Chr8:75952452-75952471 | MsG0880046631.01.T01:intron | 35.0% | |
| ! | AACAAGCTTGAGTGTTTTCT+TGG | + | Chr8:75951206-75951225 | None:intergenic | 35.0% |
| ! | AGGAGGTGGTTAAAAGTATA+AGG | - | Chr8:75952002-75952021 | MsG0880046631.01.T01:intron | 35.0% |
| ! | CTTGAGTAACCATTTTGTCA+AGG | + | Chr8:75952126-75952145 | None:intergenic | 35.0% |
| ! | TCATGTTCCGATTTTATGTG+AGG | - | Chr8:75952278-75952297 | MsG0880046631.01.T01:intron | 35.0% |
| ! | TCCGATTTTATGTGAGGATA+AGG | - | Chr8:75952284-75952303 | MsG0880046631.01.T01:intron | 35.0% |
| !! | ACACTCAAGCTTGTTAAAAG+AGG | - | Chr8:75951211-75951230 | MsG0880046631.01.T01:exon | 35.0% |
| !!! | TGTACTGTTTTTGGCTACAA+TGG | - | Chr8:75953197-75953216 | MsG0880046631.01.T01:CDS | 35.0% |
| AAAGGGTGAACTATCTCAAG+AGG | - | Chr8:75953082-75953101 | MsG0880046631.01.T01:intron | 40.0% | |
| AACTTTGCGCTGAATCTTGA+TGG | - | Chr8:75952349-75952368 | MsG0880046631.01.T01:intron | 40.0% | |
| AAGGTGCAACATCATCAATG+AGG | + | Chr8:75952518-75952537 | None:intergenic | 40.0% | |
| AGTATAAGGCGAGGTCAAAA+AGG | - | Chr8:75952016-75952035 | MsG0880046631.01.T01:intron | 40.0% | |
| ATAACATTCTTGGGCCAGTT+TGG | + | Chr8:75951727-75951746 | None:intergenic | 40.0% | |
| ATCAAGATTCAGCGCAAAGT+TGG | + | Chr8:75952350-75952369 | None:intergenic | 40.0% | |
| CATAAAGAGAGGAGTTAAGG+AGG | - | Chr8:75951985-75952004 | MsG0880046631.01.T01:intron | 40.0% | |
| GCAGAGTGTGTATTATAGCT+GGG | - | Chr8:75952229-75952248 | MsG0880046631.01.T01:intron | 40.0% | |
| GCTTATTTCAGCTGATCTAC+TGG | + | Chr8:75951700-75951719 | None:intergenic | 40.0% | |
| GTATAAGGCGAGGTCAAAAA+GGG | - | Chr8:75952017-75952036 | MsG0880046631.01.T01:intron | 40.0% | |
| GTGCATAAAGAGAGGAGTTA+AGG | - | Chr8:75951982-75952001 | MsG0880046631.01.T01:intron | 40.0% | |
| TATGGAATTAAGGGCCTGTT+TGG | - | Chr8:75951434-75951453 | MsG0880046631.01.T01:intron | 40.0% | |
| TGAGATAGTTCACCCTTTGA+AGG | + | Chr8:75953080-75953099 | None:intergenic | 40.0% | |
| ! | CTAAGCATTGCAGTGTTTCT+GGG | - | Chr8:75951297-75951316 | MsG0880046631.01.T01:CDS | 40.0% |
| ! | GTGGTTAAAAGTATAAGGCG+AGG | - | Chr8:75952007-75952026 | MsG0880046631.01.T01:intron | 40.0% |
| ! | TCTAAGCATTGCAGTGTTTC+TGG | - | Chr8:75951296-75951315 | MsG0880046631.01.T01:CDS | 40.0% |
| ! | TTGAGTGCTTTTCCTTATGC+CGG | - | Chr8:75952548-75952567 | MsG0880046631.01.T01:intron | 40.0% |
| !!! | TTGCAGTGTTTCTGGGTTTT+TGG | - | Chr8:75951304-75951323 | MsG0880046631.01.T01:CDS | 40.0% |
| AAAGAGAGGAGTTAAGGAGG+TGG | - | Chr8:75951988-75952007 | MsG0880046631.01.T01:intron | 45.0% | |
| AGAGAGATTAGGGAAACAGG+CGG | + | Chr8:75952402-75952421 | None:intergenic | 45.0% | |
| AGTGATGACCAAGCCTTCAA+AGG | - | Chr8:75953064-75953083 | MsG0880046631.01.T01:intron | 45.0% | |
| ATTCTTGGGCCAGTTTGGAT+TGG | + | Chr8:75951722-75951741 | None:intergenic | 45.0% | |
| ATTTGTCCAGGACCTTGCAA+CGG | - | Chr8:75953008-75953027 | MsG0880046631.01.T01:intron | 45.0% | |
| CGACAGTGAAGGTGAGAAAT+CGG | - | Chr8:75951105-75951124 | MsG0880046631.01.T01:three_prime_UTR | 45.0% | |
| CGCAGAGTGTGTATTATAGC+TGG | - | Chr8:75952228-75952247 | MsG0880046631.01.T01:intron | 45.0% | |
| GAAAGCTTCTTTCCAGCAAG+AGG | + | Chr8:75951184-75951203 | None:intergenic | 45.0% | |
| GTGATGACCAAGCCTTCAAA+GGG | - | Chr8:75953065-75953084 | MsG0880046631.01.T01:intron | 45.0% | |
| GTGTTATGAATGCCGGCATA+AGG | + | Chr8:75952563-75952582 | None:intergenic | 45.0% | |
| ! | AGCAAGAGGTTTTGCAATGG+GGG | + | Chr8:75951170-75951189 | None:intergenic | 45.0% |
| ! | CAGCAAGAGGTTTTGCAATG+GGG | + | Chr8:75951171-75951190 | None:intergenic | 45.0% |
| ! | CCAGCAAGAGGTTTTGCAAT+GGG | + | Chr8:75951172-75951191 | None:intergenic | 45.0% |
| ! | TAGTTCACCCTTTGAAGGCT+TGG | + | Chr8:75953075-75953094 | None:intergenic | 45.0% |
| ! | TCCAGCAAGAGGTTTTGCAA+TGG | + | Chr8:75951173-75951192 | None:intergenic | 45.0% |
| AAGGTGAGAAATCGGTGCAG+AGG | - | Chr8:75951113-75951132 | MsG0880046631.01.T01:three_prime_UTR | 50.0% | |
| AGGTGAGAAATCGGTGCAGA+GGG | - | Chr8:75951114-75951133 | MsG0880046631.01.T01:three_prime_UTR | 50.0% | |
| CACACTCTGCGTTGAGAAGA+AGG | + | Chr8:75952219-75952238 | None:intergenic | 50.0% | |
| CCCATTGCAAAACCTCTTGC+TGG | - | Chr8:75951169-75951188 | MsG0880046631.01.T01:three_prime_UTR | 50.0% | |
| GAAGGAGAGGAAGAAGATGC+AGG | - | Chr8:75951138-75951157 | MsG0880046631.01.T01:three_prime_UTR | 50.0% | |
| GAAATCGGTGCAGAGGGAGA+AGG | - | Chr8:75951120-75951139 | MsG0880046631.01.T01:three_prime_UTR | 55.0% | |
| TCGTTGCTCCTGCCGTTGCA+AGG | + | Chr8:75953023-75953042 | None:intergenic | 60.0% | |
| CGGTGCAGAGGGAGAAGGAG+AGG | - | Chr8:75951125-75951144 | MsG0880046631.01.T01:three_prime_UTR | 65.0% | |
| CTCCTGCCGTTGCAAGGTCC+TGG | + | Chr8:75953017-75953036 | None:intergenic | 65.0% | |
| GTCCAGGACCTTGCAACGGC+AGG | - | Chr8:75953012-75953031 | MsG0880046631.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 75951097 | 75953305 | 75951097 | ID=MsG0880046631.01;Name=MsG0880046631.01 |
| Chr8 | mRNA | 75951097 | 75953305 | 75951097 | ID=MsG0880046631.01.T01;Parent=MsG0880046631.01;Name=MsG0880046631.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0.33|1|0|0|3|127|145 |
| Chr8 | exon | 75951097 | 75951384 | 75951097 | ID=MsG0880046631.01.T01:exon:32421;Parent=MsG0880046631.01.T01 |
| Chr8 | exon | 75952060 | 75952169 | 75952060 | ID=MsG0880046631.01.T01:exon:32420;Parent=MsG0880046631.01.T01 |
| Chr8 | exon | 75953139 | 75953305 | 75953139 | ID=MsG0880046631.01.T01:exon:32419;Parent=MsG0880046631.01.T01 |
| Chr8 | CDS | 75953139 | 75953305 | 75953139 | ID=MsG0880046631.01.T01:cds;Parent=MsG0880046631.01.T01 |
| Chr8 | CDS | 75952060 | 75952169 | 75952060 | ID=MsG0880046631.01.T01:cds;Parent=MsG0880046631.01.T01 |
| Chr8 | CDS | 75951224 | 75951384 | 75951224 | ID=MsG0880046631.01.T01:cds;Parent=MsG0880046631.01.T01 |
| Chr8 | three_prime_UTR | 75951097 | 75951223 | 75951097 | ID=MsG0880046631.01.T01:three_prime_utr;Parent=MsG0880046631.01.T01 |
| Gene Sequence |
| Protein sequence |
