AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010425.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010425.01.T01 MTR_2g084000 94.357 319 18 0 24 342 1 319 0.0 621
MsG0280010425.01.T01 MTR_2g084020 84.013 319 50 1 24 342 1 318 0.0 548
MsG0280010425.01.T01 MTR_2g084010 82.759 319 54 1 24 342 1 318 0.0 541
MsG0280010425.01.T01 MTR_2g084110 79.310 319 64 2 24 342 1 317 0.0 514
MsG0280010425.01.T01 MTR_2g084080 78.997 319 65 2 24 342 1 317 0.0 513
MsG0280010425.01.T01 MTR_2g084090 74.688 320 78 3 24 342 1 318 3.85e-169 473
MsG0280010425.01.T01 MTR_3g094650 62.418 306 112 3 39 342 18 322 8.54e-133 381
MsG0280010425.01.T01 MTR_3g094670 63.725 306 108 3 39 342 18 322 2.31e-131 378
MsG0280010425.01.T01 MTR_3g094630 63.107 309 111 2 36 342 15 322 3.67e-130 375
MsG0280010425.01.T01 MTR_7g072510 55.380 316 137 2 27 342 1 312 3.39e-128 369
MsG0280010425.01.T01 MTR_5g083860 57.460 315 131 3 30 342 12 325 1.90e-126 365
MsG0280010425.01.T01 MTR_7g072480 57.860 299 125 1 44 342 19 316 6.04e-124 358
MsG0280010425.01.T01 MTR_3g466200 54.603 315 138 4 31 342 8 320 1.91e-121 352
MsG0280010425.01.T01 MTR_3g072190 54.545 319 144 1 24 342 1 318 1.13e-117 343
MsG0280010425.01.T01 MTR_4g029170 55.238 315 137 4 30 342 9 321 1.16e-116 340
MsG0280010425.01.T01 MTR_4g083710 53.459 318 144 2 29 342 7 324 1.49e-115 338
MsG0280010425.01.T01 MTR_1g115900 52.997 317 146 2 28 342 6 321 6.78e-114 333
MsG0280010425.01.T01 MTR_4g029180 55.973 293 126 3 52 342 30 321 2.48e-111 327
MsG0280010425.01.T01 MTR_5g074760 53.165 316 143 4 31 342 7 321 2.92e-111 327
MsG0280010425.01.T01 MTR_3g466180 56.566 297 128 1 46 342 28 323 3.75e-111 327
MsG0280010425.01.T01 MTR_5g021060 52.159 301 137 1 49 342 30 330 6.94e-111 326
MsG0280010425.01.T01 MTR_5g074740 53.797 316 141 4 31 342 7 321 1.26e-110 325
MsG0280010425.01.T01 MTR_5g074970 55.333 300 129 3 47 342 28 326 4.98e-110 324
MsG0280010425.01.T01 MTR_4g029200 53.041 296 138 1 47 342 44 338 7.06e-109 321
MsG0280010425.01.T01 MTR_5g074710 53.312 317 141 5 30 342 8 321 9.72e-109 320
MsG0280010425.01.T01 MTR_5g074860 51.266 316 147 5 30 341 12 324 1.62e-107 317
MsG0280010425.01.T01 MTR_4g074995 52.885 312 129 4 36 342 10 308 8.96e-107 315
MsG0280010425.01.T01 MTR_7g026990 49.527 317 157 3 27 342 8 322 1.09e-106 315
MsG0280010425.01.T01 MTR_8g076820 49.508 305 147 1 45 342 26 330 1.02e-105 313
MsG0280010425.01.T01 MTR_3g467600 49.367 316 155 4 31 342 10 324 6.49e-104 308
MsG0280010425.01.T01 MTR_4g029190 51.333 300 142 3 46 342 42 340 1.05e-102 306
MsG0280010425.01.T01 MTR_5g017860 49.394 330 146 6 21 342 10 326 1.21e-102 305
MsG0280010425.01.T01 MTR_4g074990 50.473 317 136 4 31 342 5 305 4.58e-101 300
MsG0280010425.01.T01 MTR_1g054205 47.771 314 155 3 38 342 13 326 1.03e-100 300
MsG0280010425.01.T01 MTR_5g017850 48.193 332 151 6 19 342 8 326 5.08e-100 298
MsG0280010425.01.T01 MTR_2g029815 47.840 324 156 3 32 342 7 330 8.67e-100 298
MsG0280010425.01.T01 MTR_7g093370 46.130 323 165 3 29 342 49 371 1.64e-99 298
MsG0280010425.01.T01 MTR_2g029830 50.164 305 144 2 46 342 25 329 2.62e-99 297
MsG0280010425.01.T01 MTR_4g125940 46.802 344 151 6 13 342 4 329 1.15e-98 295
MsG0280010425.01.T01 MTR_2g040000 47.879 330 151 4 28 342 8 331 1.33e-98 295
MsG0280010425.01.T01 MTR_1g022970 50.662 302 141 2 49 342 46 347 9.21e-98 293
MsG0280010425.01.T01 MTR_2g029750 50.327 306 142 3 46 342 26 330 3.93e-97 292
MsG0280010425.01.T01 MTR_2g029800 49.180 305 147 2 46 342 26 330 1.04e-95 288
MsG0280010425.01.T01 MTR_2g029820 48.852 305 148 2 46 342 26 330 5.09e-95 286
MsG0280010425.01.T01 MTR_2g029860 47.541 305 152 2 46 342 26 330 4.05e-94 284
MsG0280010425.01.T01 MTR_3g072190 56.574 251 108 1 92 342 2 251 4.27e-94 280
MsG0280010425.01.T01 MTR_4g122640 45.485 299 158 1 49 342 38 336 1.65e-91 277
MsG0280010425.01.T01 MTR_2g028980 45.427 328 164 3 23 342 10 330 8.03e-91 276
MsG0280010425.01.T01 MTR_2g029740 47.712 306 150 3 46 342 26 330 9.98e-91 275
MsG0280010425.01.T01 MTR_4g074980 46.057 317 142 4 27 342 6 294 1.91e-89 270
MsG0280010425.01.T01 MTR_2g029560 45.395 304 158 2 47 342 22 325 5.67e-89 271
MsG0280010425.01.T01 MTR_2g029910 46.405 306 155 3 46 342 27 332 9.30e-89 270
MsG0280010425.01.T01 MTR_5g014100 46.078 306 153 2 49 342 26 331 2.83e-88 268
MsG0280010425.01.T01 MTR_5g049280 45.425 306 156 5 48 342 32 337 3.07e-88 268
MsG0280010425.01.T01 MTR_2g029850 46.230 305 156 2 46 342 26 330 8.32e-88 268
MsG0280010425.01.T01 MTR_5g074860 45.886 316 125 7 30 341 12 285 2.13e-86 262
MsG0280010425.01.T01 MTR_4g030890 45.395 304 155 4 46 342 97 396 3.31e-86 266
MsG0280010425.01.T01 MTR_2g029730 44.737 304 160 2 47 342 23 326 1.42e-84 259
MsG0280010425.01.T01 MTR_4g074980 51.394 251 115 3 27 273 6 253 3.98e-84 255
MsG0280010425.01.T01 MTR_4g125940 49.104 279 122 4 78 342 2 274 1.48e-83 254
MsG0280010425.01.T01 MTR_3g092990 41.639 305 169 3 46 342 23 326 1.07e-80 249
MsG0280010425.01.T01 MTR_4g031140 41.528 301 165 4 49 342 28 324 2.00e-79 246
MsG0280010425.01.T01 MTR_2g029830 49.219 256 122 2 95 342 6 261 6.85e-77 238
MsG0280010425.01.T01 MTR_8g075100 41.528 301 162 5 49 342 26 319 3.12e-75 234
MsG0280010425.01.T01 MTR_0155s0040 36.842 323 192 8 24 342 1 315 5.96e-75 234
MsG0280010425.01.T01 MTR_4g046713 38.750 320 186 4 31 342 9 326 8.76e-74 231
MsG0280010425.01.T01 MTR_2g088770 40.312 320 179 6 31 342 10 325 9.05e-74 231
MsG0280010425.01.T01 MTR_5g022870 39.264 326 178 7 24 342 4 316 1.57e-73 230
MsG0280010425.01.T01 MTR_2g008710 39.210 329 183 6 25 342 3 325 2.76e-73 230
MsG0280010425.01.T01 MTR_1g101830 38.272 324 183 6 26 342 9 322 5.61e-73 229
MsG0280010425.01.T01 MTR_1g025980 39.264 326 181 8 24 341 1 317 1.06e-71 226
MsG0280010425.01.T01 MTR_6g043280 42.953 298 160 7 49 342 41 332 1.89e-71 225
MsG0280010425.01.T01 MTR_1g009750 38.369 331 189 4 21 342 4 328 3.67e-71 224
MsG0280010425.01.T01 MTR_4g114210 39.264 326 179 7 30 342 1 320 6.24e-71 224
MsG0280010425.01.T01 MTR_4g095450 40.752 319 183 4 28 341 6 323 1.14e-70 223
MsG0280010425.01.T01 MTR_7g107520 39.697 330 179 6 20 342 4 320 2.11e-70 222
MsG0280010425.01.T01 MTR_3g092990 39.672 305 164 4 46 342 23 315 3.22e-70 222
MsG0280010425.01.T01 MTR_7g086820 38.361 305 169 5 47 342 18 312 3.14e-69 219
MsG0280010425.01.T01 MTR_1g086320 39.275 331 182 7 24 342 10 333 6.06e-69 219
MsG0280010425.01.T01 MTR_6g027440 38.438 320 186 6 28 342 1 314 1.58e-68 218
MsG0280010425.01.T01 MTR_4g087965 39.067 343 193 8 10 338 2 342 1.83e-68 218
MsG0280010425.01.T01 MTR_7g029030 37.618 319 193 4 28 342 4 320 3.86e-68 216
MsG0280010425.01.T01 MTR_1g038680 39.867 301 169 5 53 342 33 332 6.57e-68 216
MsG0280010425.01.T01 MTR_7g086870 39.731 297 173 5 47 342 20 311 1.55e-67 214
MsG0280010425.01.T01 MTR_1g086490 38.757 338 181 7 24 342 10 340 1.92e-67 215
MsG0280010425.01.T01 MTR_1g077000 35.625 320 199 6 24 342 14 327 8.76e-67 213
MsG0280010425.01.T01 MTR_2g437770 39.073 302 166 7 49 342 50 341 1.22e-66 213
MsG0280010425.01.T01 MTR_5g074700 49.339 227 96 5 120 342 3 214 3.24e-65 205
MsG0280010425.01.T01 MTR_4g132490 36.570 309 173 5 48 342 28 327 3.22e-64 207
MsG0280010425.01.T01 MTR_6g043240 37.349 332 188 7 25 342 6 331 2.11e-63 205
MsG0280010425.01.T01 MTR_1g090760 35.347 331 201 6 22 342 3 330 5.75e-63 204
MsG0280010425.01.T01 MTR_5g016010 37.690 329 193 5 24 341 1 328 6.02e-63 203
MsG0280010425.01.T01 MTR_4g133800 38.384 297 166 7 54 342 46 333 1.37e-62 202
MsG0280010425.01.T01 MTR_1g066710 35.548 301 187 4 47 342 25 323 2.21e-62 202
MsG0280010425.01.T01 MTR_4g127670 39.203 301 169 5 48 338 23 319 7.58e-62 200
MsG0280010425.01.T01 MTR_3g105790 35.976 328 195 4 24 342 1 322 1.49e-60 197
MsG0280010425.01.T01 MTR_0286s0010 36.184 304 185 5 47 342 32 334 6.47e-59 193
MsG0280010425.01.T01 MTR_6g008075 36.184 304 185 5 47 342 32 334 6.47e-59 193
MsG0280010425.01.T01 MTR_2g067440 34.731 334 177 8 47 342 58 388 8.91e-59 194
MsG0280010425.01.T01 MTR_1g066640 35.216 301 188 4 47 342 25 323 9.83e-59 192
MsG0280010425.01.T01 MTR_2g078610 33.939 330 179 5 47 338 74 402 1.12e-58 195
MsG0280010425.01.T01 MTR_1g066380 34.551 301 190 4 47 342 25 323 2.32e-58 191
MsG0280010425.01.T01 MTR_8g062780 35.410 305 187 4 47 342 21 324 5.35e-58 191
MsG0280010425.01.T01 MTR_2g077990 34.743 331 175 7 47 338 74 402 5.81e-58 193
MsG0280010425.01.T01 MTR_3g072210 53.514 185 85 1 159 342 54 238 2.03e-57 186
MsG0280010425.01.T01 MTR_2g008160 38.312 308 172 8 47 342 22 323 2.36e-57 189
MsG0280010425.01.T01 MTR_1g009750 33.934 333 184 5 21 342 4 311 3.13e-56 186
MsG0280010425.01.T01 MTR_2g099175 34.218 339 201 8 20 342 3 335 4.51e-56 186
MsG0280010425.01.T01 MTR_6g043460 35.220 318 194 6 30 338 10 324 1.55e-55 185
MsG0280010425.01.T01 MTR_1g066680 34.551 301 189 5 47 342 25 322 9.27e-55 182
MsG0280010425.01.T01 MTR_2g008730 35.366 328 171 7 26 342 4 301 1.93e-54 181
MsG0280010425.01.T01 MTR_2g078280 34.579 321 169 7 47 328 74 392 1.09e-53 181
MsG0280010425.01.T01 MTR_7g072490 42.739 241 83 4 95 335 2 187 2.01e-53 175
MsG0280010425.01.T01 MTR_5g033470 35.484 310 183 9 47 342 71 377 3.58e-53 179
MsG0280010425.01.T01 MTR_4g132110 34.459 296 187 4 52 342 35 328 4.10e-53 178
MsG0280010425.01.T01 MTR_4g132110 33.887 301 187 5 52 342 35 333 4.49e-51 173
MsG0280010425.01.T01 MTR_2g067450 35.065 308 181 9 47 341 9 310 5.04e-51 172
MsG0280010425.01.T01 MTR_1g066380 35.294 255 158 4 93 342 3 255 2.33e-45 155
MsG0280010425.01.T01 MTR_2g008160 35.099 302 155 9 47 342 22 288 1.88e-44 154
MsG0280010425.01.T01 MTR_0147s0010 29.102 323 187 5 46 341 74 381 3.99e-44 156
MsG0280010425.01.T01 MTR_3g072260 53.383 133 62 0 24 156 1 133 7.84e-43 145
MsG0280010425.01.T01 MTR_3g105790 36.250 240 143 2 112 342 8 246 4.95e-39 139
MsG0280010425.01.T01 MTR_2g008160 42.775 173 95 3 46 218 21 189 1.14e-38 137
MsG0280010425.01.T01 MTR_2g029880 39.594 197 99 5 155 342 3 188 4.66e-35 127
MsG0280010425.01.T01 MTR_2g077980 30.576 278 144 10 111 342 11 285 3.27e-24 100
MsG0280010425.01.T01 MTR_3g462850 40.690 145 75 5 209 342 5 149 5.08e-24 96.7
MsG0280010425.01.T01 MTR_5g074770 50.000 90 43 2 253 341 20 108 4.43e-23 92.8
MsG0280010425.01.T01 MTR_7g086790 40.000 120 68 2 96 215 17 132 1.28e-22 94.0
MsG0280010425.01.T01 MTR_2g078560 28.111 217 117 5 160 338 101 316 1.84e-20 90.9
MsG0280010425.01.T01 MTR_6g048160 54.167 72 29 2 88 159 22 89 5.28e-18 78.2
MsG0280010425.01.T01 MTR_5g058120 33.766 154 97 3 185 338 7 155 1.12e-17 81.6
MsG0280010425.01.T01 MTR_1g089005 39.496 119 65 2 49 161 15 132 2.63e-17 78.6
MsG0280010425.01.T01 MTR_4g031040 32.335 167 76 3 108 274 1 130 4.38e-17 77.4
MsG0280010425.01.T01 MTR_3g107060 27.106 273 131 9 64 321 91 310 1.92e-16 79.3
MsG0280010425.01.T01 MTR_2g029930 42.157 102 31 3 46 133 16 103 6.50e-16 73.2
MsG0280010425.01.T01 MTR_4g114220 42.857 91 42 2 68 158 22 102 8.41e-16 73.9
MsG0280010425.01.T01 MTR_1g098320 45.570 79 42 1 264 342 47 124 3.45e-15 72.0
MsG0280010425.01.T01 MTR_7g086785 31.061 132 90 1 95 226 4 134 1.29e-13 67.8
MsG0280010425.01.T01 MTR_3g088160 27.778 198 119 6 142 329 180 363 1.72e-13 71.2
MsG0280010425.01.T01 MTR_3g088160 27.778 198 119 6 142 329 180 363 1.82e-13 71.2
MsG0280010425.01.T01 MTR_7g086810 32.231 121 56 1 47 167 4 98 3.65e-13 68.6
MsG0280010425.01.T01 MTR_4g012865 40.845 71 42 0 46 116 74 144 7.30e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010425.01.T01 AT5G05340 60.000 300 117 2 45 342 26 324 7.18e-130 374
MsG0280010425.01.T01 AT5G58400 54.286 315 139 4 31 342 13 325 1.84e-112 330
MsG0280010425.01.T01 AT3G50990 51.077 325 150 3 26 342 18 341 7.86e-110 324
MsG0280010425.01.T01 AT4G36430 49.688 320 148 4 31 342 16 330 2.23e-109 322
MsG0280010425.01.T01 AT5G58390 54.114 316 141 4 30 342 2 316 3.85e-109 321
MsG0280010425.01.T01 AT1G14550 50.318 314 154 2 31 342 8 321 1.85e-108 320
MsG0280010425.01.T01 AT5G66390 51.827 301 138 1 49 342 33 333 1.27e-107 318
MsG0280010425.01.T01 AT2G18140 47.164 335 167 2 18 342 1 335 3.49e-107 317
MsG0280010425.01.T01 AT2G18150 51.656 302 137 3 49 342 36 336 6.78e-107 316
MsG0280010425.01.T01 AT1G14540 47.500 320 162 2 24 342 1 315 1.49e-102 304
MsG0280010425.01.T01 AT5G06720 49.186 307 148 2 44 342 27 333 4.39e-102 304
MsG0280010425.01.T01 AT1G44970 52.303 304 137 2 47 342 43 346 4.57e-102 304
MsG0280010425.01.T01 AT2G38390 48.889 315 152 3 37 342 19 333 5.12e-100 299
MsG0280010425.01.T01 AT3G32980 49.051 316 151 3 37 342 19 334 2.94e-99 297
MsG0280010425.01.T01 AT4G08780 49.675 308 143 5 46 342 21 327 8.46e-99 296
MsG0280010425.01.T01 AT5G19890 48.297 323 149 6 30 342 13 327 9.32e-98 293
MsG0280010425.01.T01 AT5G06730 46.296 324 162 4 27 342 15 334 4.72e-97 292
MsG0280010425.01.T01 AT4G08770 46.965 313 156 3 40 342 15 327 5.74e-96 289
MsG0280010425.01.T01 AT1G49570 48.684 304 145 3 45 338 44 346 1.59e-95 288
MsG0280010425.01.T01 AT2G38380 47.619 315 156 3 37 342 19 333 4.46e-95 286
MsG0280010425.01.T01 AT3G49120 47.059 323 160 4 30 342 14 335 9.27e-94 283
MsG0280010425.01.T01 AT3G49110 46.203 316 160 3 37 342 21 336 2.73e-91 277
MsG0280010425.01.T01 AT4G16270 47.138 297 148 3 53 342 54 348 1.98e-90 275
MsG0280010425.01.T01 AT2G22420 42.945 326 172 5 24 342 1 319 9.90e-87 265
MsG0280010425.01.T01 AT2G35380 44.207 328 166 3 32 342 8 335 6.98e-86 263
MsG0280010425.01.T01 AT5G19880 44.984 309 157 5 46 342 22 329 1.78e-84 259
MsG0280010425.01.T01 AT1G68850 41.694 307 165 6 49 342 30 335 5.32e-84 258
MsG0280010425.01.T01 AT3G03670 41.584 303 168 3 47 342 21 321 5.84e-76 236
MsG0280010425.01.T01 AT1G05260 37.920 327 193 3 24 342 1 325 4.70e-75 234
MsG0280010425.01.T01 AT1G71695 41.176 323 184 5 24 342 19 339 5.88e-75 235
MsG0280010425.01.T01 AT5G42180 42.667 300 159 5 49 341 23 316 3.95e-74 232
MsG0280010425.01.T01 AT5G14130 37.910 335 195 6 16 342 1 330 6.15e-74 232
MsG0280010425.01.T01 AT5G14130 37.870 338 197 6 13 342 39 371 7.47e-74 233
MsG0280010425.01.T01 AT5G15180 39.319 323 181 7 30 342 12 329 2.89e-73 230
MsG0280010425.01.T01 AT5G17820 40.924 303 161 6 47 342 22 313 5.21e-73 229
MsG0280010425.01.T01 AT5G17820 40.924 303 161 6 47 342 75 366 2.47e-72 229
MsG0280010425.01.T01 AT5G64120 41.554 296 161 5 53 342 39 328 4.62e-71 224
MsG0280010425.01.T01 AT4G37530 39.869 306 173 4 47 342 25 329 3.19e-69 219
MsG0280010425.01.T01 AT2G41480 37.647 340 187 8 16 342 1 328 3.41e-69 219
MsG0280010425.01.T01 AT4G11290 36.842 323 194 3 28 342 6 326 1.20e-68 218
MsG0280010425.01.T01 AT4G30170 40.129 309 168 7 45 342 23 325 1.81e-68 218
MsG0280010425.01.T01 AT5G40150 38.538 301 180 4 46 342 29 328 1.81e-68 218
MsG0280010425.01.T01 AT4G26010 38.037 326 185 8 19 342 27 337 3.17e-68 217
MsG0280010425.01.T01 AT3G01190 39.024 328 184 7 24 342 1 321 4.89e-68 216
MsG0280010425.01.T01 AT3G28200 38.411 302 182 4 44 342 16 316 6.23e-68 216
MsG0280010425.01.T01 AT4G26010 39.597 298 170 7 47 342 20 309 1.03e-67 215
MsG0280010425.01.T01 AT3G21770 37.086 302 180 3 47 340 27 326 1.14e-67 216
MsG0280010425.01.T01 AT5G67400 38.390 323 188 4 30 342 8 329 1.24e-67 216
MsG0280010425.01.T01 AT2G18980 38.820 322 182 5 31 342 7 323 5.67e-67 214
MsG0280010425.01.T01 AT5G39580 40.741 297 163 6 53 342 29 319 5.93e-67 213
MsG0280010425.01.T01 AT1G05240 38.264 311 172 6 45 342 22 325 6.54e-67 213
MsG0280010425.01.T01 AT1G05250 38.264 311 172 6 45 342 22 325 6.54e-67 213
MsG0280010425.01.T01 AT3G49960 38.462 325 189 4 28 342 6 329 7.27e-67 214
MsG0280010425.01.T01 AT4G37520 37.908 306 179 4 47 342 25 329 1.74e-66 213
MsG0280010425.01.T01 AT4G33420 38.644 295 174 6 49 342 37 325 3.08e-65 209
MsG0280010425.01.T01 AT4G33420 38.644 295 174 6 49 342 84 372 1.13e-64 209
MsG0280010425.01.T01 AT4G37520 37.582 306 177 5 47 342 25 326 3.14e-64 207
MsG0280010425.01.T01 AT5G51890 37.377 305 178 6 46 342 23 322 1.16e-63 205
MsG0280010425.01.T01 AT2G35380 44.715 246 124 2 109 342 2 247 1.36e-62 200
MsG0280010425.01.T01 AT2G34060 36.418 335 200 6 18 340 11 344 1.58e-62 203
MsG0280010425.01.T01 AT1G30870 38.667 300 165 7 49 338 51 341 2.32e-62 202
MsG0280010425.01.T01 AT4G31760 36.637 333 191 6 19 342 5 326 4.81e-61 198
MsG0280010425.01.T01 AT5G64110 39.799 299 165 5 53 342 38 330 5.50e-61 198
MsG0280010425.01.T01 AT4G17690 36.577 298 184 4 49 342 26 322 7.72e-61 198
MsG0280010425.01.T01 AT4G37530 42.913 254 135 3 47 290 25 278 1.33e-60 196
MsG0280010425.01.T01 AT2G24800 36.601 306 179 4 47 342 29 329 5.25e-60 196
MsG0280010425.01.T01 AT1G77100 39.077 325 186 10 24 342 1 319 8.07e-60 195
MsG0280010425.01.T01 AT2G39040 39.103 312 171 8 46 342 43 350 1.31e-59 196
MsG0280010425.01.T01 AT4G25980 35.583 326 192 7 29 342 7 326 3.99e-59 193
MsG0280010425.01.T01 AT5G64100 37.667 300 170 6 52 342 40 331 9.38e-59 192
MsG0280010425.01.T01 AT4G33870 32.628 331 175 7 52 338 71 397 3.28e-58 193
MsG0280010425.01.T01 AT5G47000 35.423 319 198 5 31 342 13 330 1.26e-57 190
MsG0280010425.01.T01 AT1G34510 37.333 300 180 6 44 342 17 309 2.99e-57 188
MsG0280010425.01.T01 AT1G24110 37.461 323 184 8 30 342 8 322 1.25e-56 187
MsG0280010425.01.T01 AT5G24070 35.224 335 186 10 31 342 9 335 1.35e-56 187
MsG0280010425.01.T01 AT4G21960 33.951 324 203 5 28 342 6 327 2.33e-56 186
MsG0280010425.01.T01 AT2G43480 36.013 311 174 10 48 342 34 335 2.12e-55 184
MsG0280010425.01.T01 AT5G22410 35.410 305 177 8 47 339 26 322 1.68e-54 182
MsG0280010425.01.T01 AT2G37130 34.426 305 188 6 46 342 27 327 4.41e-53 178
MsG0280010425.01.T01 AT3G17070 33.934 333 202 9 25 342 10 339 1.73e-52 177
MsG0280010425.01.T01 AT2G37130 34.448 299 184 6 52 342 2 296 3.82e-52 174
MsG0280010425.01.T01 AT5G39580 41.117 197 107 4 53 249 29 216 5.38e-42 146
MsG0280010425.01.T01 AT2G24800 37.915 211 122 3 47 252 29 235 1.24e-39 140
MsG0280010425.01.T01 AT4G25980 36.866 217 127 5 5 216 23 234 1.31e-39 141
MsG0280010425.01.T01 AT3G17070 34.221 263 158 8 91 342 18 276 3.30e-38 137
MsG0280010425.01.T01 AT3G42570 35.484 93 59 1 125 216 57 149 2.36e-13 67.4
MsG0280010425.01.T01 AT1G77490 25.357 280 167 8 62 324 85 339 2.86e-13 70.9
MsG0280010425.01.T01 AT1G77490 25.357 280 167 8 62 324 85 339 3.07e-13 70.9
MsG0280010425.01.T01 AT4G08390 27.749 191 114 6 142 324 185 359 4.35e-13 70.1
MsG0280010425.01.T01 AT4G08390 27.749 191 114 6 142 324 186 360 4.70e-13 69.7
MsG0280010425.01.T01 AT4G08390 27.749 191 114 6 142 324 186 360 4.70e-13 69.7
MsG0280010425.01.T01 AT4G08390 27.749 191 114 6 142 324 186 360 4.70e-13 69.7

Find 71 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGACCTTACAGTCCTTTC+TGG 0.193319 2:-69307394 MsG0280010425.01.T01:CDS
GCAGGGTTGTGAATTGATTT+TGG 0.222497 2:-69307000 MsG0280010425.01.T01:exon
CGCACAATAGTTTGGAGATT+TGG 0.230163 2:+69309412 None:intergenic
ATTTGACAACAATTATTATA+AGG 0.243384 2:-69307212 MsG0280010425.01.T01:CDS
CGGAGAAAGTTGTGCATTAA+TGG 0.253773 2:+69309456 None:intergenic
CAGAAGATGGTCCAGGAATT+TGG 0.260659 2:+69307464 None:intergenic
TTGAGAGATTGTTTAATTAC+AGG 0.275887 2:-69306881 MsG0280010425.01.T01:three_prime_UTR
AGAATCAAAGGGTGCTAAAT+TGG 0.309264 2:+69307249 None:intergenic
AAAGACCTTTATTAGCAATA+AGG 0.316103 2:+69307188 None:intergenic
TATTTATAGATTTAACTATA+TGG 0.322853 2:-69309536 MsG0280010425.01.T01:CDS
TGTTGGTTCTCAAATTTCTT+TGG 0.324712 2:-69307137 MsG0280010425.01.T01:CDS
TTTCATTGCGCACAATAGTT+TGG 0.326396 2:+69309404 None:intergenic
ATCAATCTTATTGGATGATA+AGG 0.345152 2:-69307933 MsG0280010425.01.T01:CDS
ATGTGATGCATCAATCTTAT+TGG 0.358275 2:-69307942 MsG0280010425.01.T01:CDS
AGTAAAATTAGTCCTCTTAC+TGG 0.361292 2:-69307049 MsG0280010425.01.T01:CDS
TTGATAATTTGTAGTATTGT+TGG 0.376154 2:-69306822 MsG0280010425.01.T01:three_prime_UTR
AAGGACCTTATTGCTAATAA+AGG 0.382204 2:-69307193 MsG0280010425.01.T01:CDS
TAGTCCTCTTACTGGGACTA+AGG 0.384532 2:-69307041 MsG0280010425.01.T01:CDS
GCAGCAAACAGCCAAATTCC+TGG 0.386973 2:-69307475 MsG0280010425.01.T01:CDS
GTGAGATCAGAAAGAATTGC+AGG 0.399204 2:-69307018 MsG0280010425.01.T01:CDS
TAATTGTTGTCAAATTTAGT+TGG 0.427829 2:+69307220 None:intergenic
CATAAAGGTTGACTAGATCT+TGG 0.429036 2:-69306850 MsG0280010425.01.T01:three_prime_UTR
GATGATAAGGGAACATTTGT+CGG 0.429735 2:-69307920 MsG0280010425.01.T01:CDS
GTTCTCAAATTTCTTTGGTT+AGG 0.431163 2:-69307132 MsG0280010425.01.T01:CDS
TCAATCTTATTGGATGATAA+GGG 0.439805 2:-69307932 MsG0280010425.01.T01:CDS
TTACATTTACAAAGCAATCA+TGG 0.442899 2:+69309323 None:intergenic
TAGAGACTTTGCTGCTGCTA+TGG 0.447233 2:-69307080 MsG0280010425.01.T01:CDS
TTACAGGGTCTAGGTCATAA+AGG 0.449606 2:-69306865 MsG0280010425.01.T01:three_prime_UTR
CTTCATTTGCTTCCCTCCAT+TGG 0.453290 2:-69309574 MsG0280010425.01.T01:CDS
CAAGTTCTTGCATAGAAGTT+CGG 0.454666 2:+69309436 None:intergenic
ATTGTTTAATTACAGGGTCT+AGG 0.465800 2:-69306874 MsG0280010425.01.T01:three_prime_UTR
TCACCCTTAGTCCCAGTAAG+AGG 0.474368 2:+69307037 None:intergenic
TTGTGAGACTAATAATTTGA+GGG 0.486054 2:-69306940 MsG0280010425.01.T01:three_prime_UTR
AGCAAGGTTTCTGTTAATGT+TGG 0.494360 2:+69307312 None:intergenic
GTTAGGAAGTATAGTAGAGA+TGG 0.495131 2:-69307115 MsG0280010425.01.T01:CDS
TTGACACTCAGTTTGCCCTA+TGG 0.499810 2:+69307363 None:intergenic
AAAAGAAATTGTCCTACCTC+TGG 0.501405 2:-69307280 MsG0280010425.01.T01:CDS
CTTGCATCTCTTCTTCCTAG+TGG 0.506526 2:+69307514 None:intergenic
CTTTCTGGTGCACACACCAT+AGG 0.506834 2:-69307379 MsG0280010425.01.T01:CDS
AGTTGGAGTGACAGAATCAA+AGG 0.515916 2:+69307237 None:intergenic
CTAGCACTTGCAACTAGAGA+TGG 0.521717 2:-69307785 MsG0280010425.01.T01:CDS
AATTAATTTATATAGCTTGG+AGG 0.537880 2:-69307553 MsG0280010425.01.T01:intron
GATAGGTCAGAAGATGGTCC+AGG 0.542401 2:+69307457 None:intergenic
TGTAACAAAGAGTTTAATCA+AGG 0.543770 2:+69309510 None:intergenic
TTTGTGAGACTAATAATTTG+AGG 0.546498 2:-69306941 MsG0280010425.01.T01:three_prime_UTR
TGAGAGATTGTTTAATTACA+GGG 0.549156 2:-69306880 MsG0280010425.01.T01:three_prime_UTR
AACTAGAGATGGAATAGCAC+TGG 0.557344 2:-69307774 MsG0280010425.01.T01:intron
AGAAATTGTCCTACCTCTGG+TGG 0.560005 2:-69307277 MsG0280010425.01.T01:CDS
TATAGCTTGGAGGACCCTCA+TGG 0.560384 2:-69307543 MsG0280010425.01.T01:intron
ATCTAGCTTGAAGCTACCAA+TGG 0.565347 2:+69309558 None:intergenic
AGTCCTCTTACTGGGACTAA+GGG 0.567071 2:-69307040 MsG0280010425.01.T01:CDS
TAGCTTGAAGCTACCAATGG+AGG 0.570010 2:+69309561 None:intergenic
GTGCACCAGAAAGGACTGTA+AGG 0.571331 2:+69307389 None:intergenic
GCAATTTAATAAATATTGTG+TGG 0.572460 2:-69306910 MsG0280010425.01.T01:three_prime_UTR
TCCTAGTGGTACTGTCCATG+AGG 0.574303 2:+69307528 None:intergenic
TTTGCAAGAAGCTTCAACGT+TGG 0.574605 2:+69307832 None:intergenic
ACATTCTAGTGAGTGTGGAT+AGG 0.580024 2:+69307440 None:intergenic
GTTGGAGTGACAGAATCAAA+GGG 0.583532 2:+69307238 None:intergenic
TTTCTGGTGCACACACCATA+GGG 0.590778 2:-69307378 MsG0280010425.01.T01:CDS
GTAAAATTAGTCCTCTTACT+GGG 0.603083 2:-69307048 MsG0280010425.01.T01:CDS
CCTAGTGGTACTGTCCATGA+GGG 0.605688 2:+69307529 None:intergenic
TTGAAACATTCTAGTGAGTG+TGG 0.606627 2:+69307435 None:intergenic
TAAATTGGTGTCACCACCAG+AGG 0.617325 2:+69307264 None:intergenic
AGCTTGAAGCTACCAATGGA+GGG 0.617960 2:+69309562 None:intergenic
AGTGTGGATAGGTCAGAAGA+TGG 0.621043 2:+69307451 None:intergenic
AACAAAGAGTTTAATCAAGG+TGG 0.628414 2:+69309513 None:intergenic
CTATGGTGTGTGCACCAGAA+AGG 0.646942 2:+69307380 None:intergenic
CCCTCATGGACAGTACCACT+AGG 0.647878 2:-69307529 MsG0280010425.01.T01:CDS
AATATCTGCACAAGAGACAG+TGG 0.650907 2:+69307808 None:intergenic
TGAGATCAGAAAGAATTGCA+GGG 0.655189 2:-69307017 MsG0280010425.01.T01:CDS
TTGGTGTCACCACCAGAGGT+AGG 0.659540 2:+69307268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATTCTAAATATTTAT+AGG - Chr2:69307696-69307715 MsG0280010425.01.T01:intron 10.0%
!! CAAAATTCTAAATATTTATA+GGG - Chr2:69307697-69307716 MsG0280010425.01.T01:intron 10.0%
!! CATATATAAATATATAAACT+AGG - Chr2:69308633-69308652 MsG0280010425.01.T01:intron 10.0%
!! TATATAAATTAATTGAAACA+TGG + Chr2:69308785-69308804 None:intergenic 10.0%
!! TATTGAAAAATTAAAATGAT+CGG + Chr2:69308099-69308118 None:intergenic 10.0%
!! TATTTATAGATTTAACTATA+TGG - Chr2:69306808-69306827 MsG0280010425.01.T01:three_prime_UTR 10.0%
!! ATTGAAAAATTAAAATGATC+GGG + Chr2:69308098-69308117 None:intergenic 15.0%
!! ATTTGACAACAATTATTATA+AGG - Chr2:69309132-69309151 MsG0280010425.01.T01:intron 15.0%
!! CTCAATAATTTATATAACTT+AGG - Chr2:69307124-69307143 MsG0280010425.01.T01:CDS 15.0%
!! TTCAATTAATTTATATAGCT+TGG - Chr2:69308788-69308807 MsG0280010425.01.T01:intron 15.0%
!!! AAACAACATCATTTTTTATT+GGG + Chr2:69307740-69307759 None:intergenic 15.0%
!!! CTTAATTAAGCTTTTTTTAT+AGG + Chr2:69307446-69307465 None:intergenic 15.0%
!!! GTTTTATTTCTTTGTTTATT+TGG - Chr2:69308374-69308393 MsG0280010425.01.T01:intron 15.0%
!! AAAAAAAAAAAAATGCACAG+GGG + Chr2:69307893-69307912 None:intergenic 20.0%
!! AATTAATTTATATAGCTTGG+AGG - Chr2:69308791-69308810 MsG0280010425.01.T01:intron 20.0%
!! ACAAAAAAAAAAAAATGCAC+AGG + Chr2:69307895-69307914 None:intergenic 20.0%
!! ATGTTTACCAATGTAATATT+AGG + Chr2:69308727-69308746 None:intergenic 20.0%
!! ATTAATTGAAACATGGTTAT+AGG + Chr2:69308778-69308797 None:intergenic 20.0%
!! CAAAAAAAAAAAAATGCACA+GGG + Chr2:69307894-69307913 None:intergenic 20.0%
!! GCAATTTAATAAATATTGTG+TGG - Chr2:69309434-69309453 MsG0280010425.01.T01:CDS 20.0%
!! TAATTGTTGTCAAATTTAGT+TGG + Chr2:69309127-69309146 None:intergenic 20.0%
!! TATTAACCCTAATATTACAT+TGG - Chr2:69308717-69308736 MsG0280010425.01.T01:intron 20.0%
!! TATTGGGTTAATTAAGTAAA+TGG + Chr2:69307724-69307743 None:intergenic 20.0%
!! TCAACAACAAAAAATAATCA+CGG - Chr2:69308281-69308300 MsG0280010425.01.T01:intron 20.0%
!! TGTTTACCAATGTAATATTA+GGG + Chr2:69308726-69308745 None:intergenic 20.0%
!! TTTAACTCGAGTAATATTAA+CGG - Chr2:69308667-69308686 MsG0280010425.01.T01:intron 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + Chr2:69307569-69307588 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + Chr2:69307509-69307528 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + Chr2:69307508-69307527 None:intergenic 20.0%
!!! ACATTTTCCTTAAACATTTT+AGG - Chr2:69307541-69307560 MsG0280010425.01.T01:CDS 20.0%
!!! ATTTCTTTGTTTATTTGGTA+GGG - Chr2:69308379-69308398 MsG0280010425.01.T01:intron 20.0%
!!! CAAACAACATCATTTTTTAT+TGG + Chr2:69307741-69307760 None:intergenic 20.0%
!!! CATTTTCCTTAAACATTTTA+GGG - Chr2:69307542-69307561 MsG0280010425.01.T01:intron 20.0%
!!! GGTTAATATTTTTTTACAGA+GGG + Chr2:69308705-69308724 None:intergenic 20.0%
!!! GTTAATATTTTTTTACAGAG+GGG + Chr2:69308704-69308723 None:intergenic 20.0%
!!! TATTTCTTTGTTTATTTGGT+AGG - Chr2:69308378-69308397 MsG0280010425.01.T01:intron 20.0%
!!! TTGATAATTTGTAGTATTGT+TGG - Chr2:69309522-69309541 MsG0280010425.01.T01:CDS 20.0%
! AAAGACCTTTATTAGCAATA+AGG + Chr2:69309159-69309178 None:intergenic 25.0%
! ATCAATCTTATTGGATGATA+AGG - Chr2:69308411-69308430 MsG0280010425.01.T01:intron 25.0%
! ATCGTGTTAAAATATTGTCT+TGG - Chr2:69307280-69307299 MsG0280010425.01.T01:CDS 25.0%
! ATTTATTACTGTACTCACTA+TGG + Chr2:69308247-69308266 None:intergenic 25.0%
! CAACAACAAAAAATAATCAC+GGG - Chr2:69308282-69308301 MsG0280010425.01.T01:intron 25.0%
! GTAAGGATTAATTATTCGAT+TGG - Chr2:69307332-69307351 MsG0280010425.01.T01:CDS 25.0%
! TCAATCTTATTGGATGATAA+GGG - Chr2:69308412-69308431 MsG0280010425.01.T01:intron 25.0%
! TCGTGTTAAAATATTGTCTT+GGG - Chr2:69307281-69307300 MsG0280010425.01.T01:CDS 25.0%
! TGAGAGATTGTTTAATTACA+GGG - Chr2:69309464-69309483 MsG0280010425.01.T01:CDS 25.0%
! TGTAACAAAGAGTTTAATCA+AGG + Chr2:69306837-69306856 None:intergenic 25.0%
! TTACATTTACAAAGCAATCA+TGG + Chr2:69307024-69307043 None:intergenic 25.0%
! TTGAGAGATTGTTTAATTAC+AGG - Chr2:69309463-69309482 MsG0280010425.01.T01:CDS 25.0%
! TTGTGAGACTAATAATTTGA+GGG - Chr2:69309404-69309423 MsG0280010425.01.T01:CDS 25.0%
! TTTGTGAGACTAATAATTTG+AGG - Chr2:69309403-69309422 MsG0280010425.01.T01:CDS 25.0%
!! TGAGAAGAGTATATGTTTAA+AGG - Chr2:69307228-69307247 MsG0280010425.01.T01:CDS 25.0%
!! TGCTGATGGAAAATTTTATA+AGG - Chr2:69307637-69307656 MsG0280010425.01.T01:intron 25.0%
!! TTCTTTTTCTTAAGTTAGCA+AGG + Chr2:69309051-69309070 None:intergenic 25.0%
!!! AAAGTGTGACTTTATTTTGT+AGG - Chr2:69307665-69307684 MsG0280010425.01.T01:intron 25.0%
!!! AAGTGTGACTTTATTTTGTA+GGG - Chr2:69307666-69307685 MsG0280010425.01.T01:intron 25.0%
!!! GGGTTAATATTTTTTTACAG+AGG + Chr2:69308706-69308725 None:intergenic 25.0%
!!! TAACGTTCTAAGTTTTATGA+TGG - Chr2:69309566-69309585 MsG0280010425.01.T01:CDS 25.0%
!!! TGTTGTTTTATATGTTGTCT+TGG - Chr2:69307935-69307954 MsG0280010425.01.T01:CDS 25.0%
!!! TTCAGTTACTATTTTAGTCA+CGG - Chr2:69308311-69308330 MsG0280010425.01.T01:intron 25.0%
AACAAAGAGTTTAATCAAGG+TGG + Chr2:69306834-69306853 None:intergenic 30.0%
AAGGACCTTATTGCTAATAA+AGG - Chr2:69309151-69309170 MsG0280010425.01.T01:intron 30.0%
AAGTTATCAAAAATGAAGCC+CGG - Chr2:69306969-69306988 MsG0280010425.01.T01:three_prime_UTR 30.0%
ACCTAACAAAAATTCAGCTA+GGG - Chr2:69308462-69308481 MsG0280010425.01.T01:intron 30.0%
AGAGTATATGTTTAAAGGTG+TGG - Chr2:69307233-69307252 MsG0280010425.01.T01:CDS 30.0%
AGGATACACATATTGTTTAC+AGG + Chr2:69308758-69308777 None:intergenic 30.0%
AGTAAAATTAGTCCTCTTAC+TGG - Chr2:69309295-69309314 MsG0280010425.01.T01:intron 30.0%
ATAGTGACTAAAAATGCTGA+TGG - Chr2:69307623-69307642 MsG0280010425.01.T01:intron 30.0%
ATGTGATGCATCAATCTTAT+TGG - Chr2:69308402-69308421 MsG0280010425.01.T01:intron 30.0%
ATTGTTTAATTACAGGGTCT+AGG - Chr2:69309470-69309489 MsG0280010425.01.T01:CDS 30.0%
CGTGTTAAAATATTGTCTTG+GGG - Chr2:69307282-69307301 MsG0280010425.01.T01:CDS 30.0%
GGATACACATATTGTTTACA+GGG + Chr2:69308757-69308776 None:intergenic 30.0%
GTAAAATTAGTCCTCTTACT+GGG - Chr2:69309296-69309315 MsG0280010425.01.T01:intron 30.0%
GTTCATTGTTCATGTCTTAT+AGG + Chr2:69308614-69308633 None:intergenic 30.0%
GTTCTCAAATTTCTTTGGTT+AGG - Chr2:69309212-69309231 MsG0280010425.01.T01:intron 30.0%
TTGATTTCTCATCTTCATTG+TGG - Chr2:69307969-69307988 MsG0280010425.01.T01:intron 30.0%
TTTGGTCCCTAAAATGTTTA+AGG + Chr2:69307551-69307570 None:intergenic 30.0%
! AATTCGCTTTGTTGTATGAT+GGG - Chr2:69307383-69307402 MsG0280010425.01.T01:CDS 30.0%
! TAATTCGCTTTGTTGTATGA+TGG - Chr2:69307382-69307401 MsG0280010425.01.T01:CDS 30.0%
! TCTGATCAAGTTCTTTTCAA+TGG - Chr2:69309184-69309203 MsG0280010425.01.T01:intron 30.0%
!! GTTGTGAATTGATTTTGGAT+TGG - Chr2:69309349-69309368 MsG0280010425.01.T01:CDS 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - Chr2:69307573-69307592 MsG0280010425.01.T01:intron 30.0%
!! TGTTGGTTCTCAAATTTCTT+TGG - Chr2:69309207-69309226 MsG0280010425.01.T01:intron 30.0%
!!! TCAGTTACTATTTTAGTCAC+GGG - Chr2:69308312-69308331 MsG0280010425.01.T01:intron 30.0%
AAAAGAAATTGTCCTACCTC+TGG - Chr2:69309064-69309083 MsG0280010425.01.T01:intron 35.0%
ACAGGTACTAAAAATGCTGA+TGG - Chr2:69307591-69307610 MsG0280010425.01.T01:intron 35.0%
AGCAAGGTTTCTGTTAATGT+TGG + Chr2:69309035-69309054 None:intergenic 35.0%
CAAGTTCTTGCATAGAAGTT+CGG + Chr2:69306911-69306930 None:intergenic 35.0%
CATAAAGGTTGACTAGATCT+TGG - Chr2:69309494-69309513 MsG0280010425.01.T01:CDS 35.0%
CCTAACAAAAATTCAGCTAG+GGG - Chr2:69308463-69308482 MsG0280010425.01.T01:intron 35.0%
GACCTAACAAAAATTCAGCT+AGG - Chr2:69308461-69308480 MsG0280010425.01.T01:intron 35.0%
GATGATAAGGGAACATTTGT+CGG - Chr2:69308424-69308443 MsG0280010425.01.T01:intron 35.0%
GTAGCTTAGAGAGAATTGTA+AGG - Chr2:69307315-69307334 MsG0280010425.01.T01:CDS 35.0%
GTTAAAATATTGTCTTGGGG+TGG - Chr2:69307285-69307304 MsG0280010425.01.T01:CDS 35.0%
TGAGATCAGAAAGAATTGCA+GGG - Chr2:69309327-69309346 MsG0280010425.01.T01:CDS 35.0%
TTAGGGACCAAAAATGTTGA+TGG - Chr2:69307559-69307578 MsG0280010425.01.T01:intron 35.0%
TTGAAACATTCTAGTGAGTG+TGG + Chr2:69308912-69308931 None:intergenic 35.0%
TTTCATTGCGCACAATAGTT+TGG + Chr2:69306943-69306962 None:intergenic 35.0%
! ATTCGATTGGTGTTCATGTT+TGG - Chr2:69307345-69307364 MsG0280010425.01.T01:CDS 35.0%
! CAAGTTCTTTTCAATGGTGT+TGG - Chr2:69309190-69309209 MsG0280010425.01.T01:intron 35.0%
! GTATATGTTTAAAGGTGTGG+TGG - Chr2:69307236-69307255 MsG0280010425.01.T01:CDS 35.0%
! GTTAGGAAGTATAGTAGAGA+TGG - Chr2:69309229-69309248 MsG0280010425.01.T01:intron 35.0%
! TTCGATTGGTGTTCATGTTT+GGG - Chr2:69307346-69307365 MsG0280010425.01.T01:CDS 35.0%
!! AAAGGTGTGGTGGATAAAAT+TGG - Chr2:69307246-69307265 MsG0280010425.01.T01:CDS 35.0%
!! AGAATCAAAGGGTGCTAAAT+TGG + Chr2:69309098-69309117 None:intergenic 35.0%
!!! AGCTTCAACGTTGGTTTTAA+TGG + Chr2:69308506-69308525 None:intergenic 35.0%
AACTAGAGATGGAATAGCAC+TGG - Chr2:69308570-69308589 MsG0280010425.01.T01:intron 40.0%
AATATCTGCACAAGAGACAG+TGG + Chr2:69308539-69308558 None:intergenic 40.0%
AATGACCTTACAGTCCTTTC+TGG - Chr2:69308950-69308969 MsG0280010425.01.T01:intron 40.0%
ACATTCTAGTGAGTGTGGAT+AGG + Chr2:69308907-69308926 None:intergenic 40.0%
AGTTGGAGTGACAGAATCAA+AGG + Chr2:69309110-69309129 None:intergenic 40.0%
ATCAAAAATGAAGCCCGGAT+GGG - Chr2:69306974-69306993 MsG0280010425.01.T01:three_prime_UTR 40.0%
CGAGTAATATTAACGGCTTC+TGG - Chr2:69308674-69308693 MsG0280010425.01.T01:intron 40.0%
CGCACAATAGTTTGGAGATT+TGG + Chr2:69306935-69306954 None:intergenic 40.0%
CGGAGAAAGTTGTGCATTAA+TGG + Chr2:69306891-69306910 None:intergenic 40.0%
GGTGGATAAAATTGGTGTAG+TGG - Chr2:69307254-69307273 MsG0280010425.01.T01:CDS 40.0%
GTGAGATCAGAAAGAATTGC+AGG - Chr2:69309326-69309345 MsG0280010425.01.T01:intron 40.0%
GTTGGAGTGACAGAATCAAA+GGG + Chr2:69309109-69309128 None:intergenic 40.0%
TAGCGTCAATGTTACTGATC+AGG - Chr2:69308060-69308079 MsG0280010425.01.T01:intron 40.0%
TATCAAAAATGAAGCCCGGA+TGG - Chr2:69306973-69306992 MsG0280010425.01.T01:three_prime_UTR 40.0%
TTACAGGGTCTAGGTCATAA+AGG - Chr2:69309479-69309498 MsG0280010425.01.T01:CDS 40.0%
TTTGCAAGAAGCTTCAACGT+TGG + Chr2:69308515-69308534 None:intergenic 40.0%
TTTGTCGGTGAGAAAAATGC+TGG - Chr2:69308439-69308458 MsG0280010425.01.T01:intron 40.0%
! ATCTAGCTTGAAGCTACCAA+TGG + Chr2:69306789-69306808 None:intergenic 40.0%
! CCCCTAGCTGAATTTTTGTT+AGG + Chr2:69308466-69308485 None:intergenic 40.0%
! TGTGATTTGTCGTCTGCTTT+CGG - Chr2:69307912-69307931 MsG0280010425.01.T01:CDS 40.0%
!! GCAGGGTTGTGAATTGATTT+TGG - Chr2:69309344-69309363 MsG0280010425.01.T01:CDS 40.0%
AGAAATTGTCCTACCTCTGG+TGG - Chr2:69309067-69309086 MsG0280010425.01.T01:intron 45.0%
AGCTTGAAGCTACCAATGGA+GGG + Chr2:69306785-69306804 None:intergenic 45.0%
AGTCCTCTTACTGGGACTAA+GGG - Chr2:69309304-69309323 MsG0280010425.01.T01:intron 45.0%
AGTGTGGATAGGTCAGAAGA+TGG + Chr2:69308896-69308915 None:intergenic 45.0%
CAGAAGATGGTCCAGGAATT+TGG + Chr2:69308883-69308902 None:intergenic 45.0%
CGTCAATGTTACTGATCAGG+AGG - Chr2:69308063-69308082 MsG0280010425.01.T01:intron 45.0%
CTAGCACTTGCAACTAGAGA+TGG - Chr2:69308559-69308578 MsG0280010425.01.T01:intron 45.0%
CTTCATTTGCTTCCCTCCAT+TGG - Chr2:69306770-69306789 MsG0280010425.01.T01:three_prime_UTR 45.0%
CTTGCATCTCTTCTTCCTAG+TGG + Chr2:69308833-69308852 None:intergenic 45.0%
TACTGTACTCACTATGGAGC+AGG + Chr2:69308241-69308260 None:intergenic 45.0%
TAGAGACTTTGCTGCTGCTA+TGG - Chr2:69309264-69309283 MsG0280010425.01.T01:intron 45.0%
TAGCTTGAAGCTACCAATGG+AGG + Chr2:69306786-69306805 None:intergenic 45.0%
TAGTCCTCTTACTGGGACTA+AGG - Chr2:69309303-69309322 MsG0280010425.01.T01:intron 45.0%
TCAAAAATGAAGCCCGGATG+GGG - Chr2:69306975-69306994 MsG0280010425.01.T01:three_prime_UTR 45.0%
TTGACACTCAGTTTGCCCTA+TGG + Chr2:69308984-69309003 None:intergenic 45.0%
! TTTCTGGTGCACACACCATA+GGG - Chr2:69308966-69308985 MsG0280010425.01.T01:intron 45.0%
!! TAAATTGGTGTCACCACCAG+AGG + Chr2:69309083-69309102 None:intergenic 45.0%
!! ATATATAAATATATAAACTA+GGG - Chr2:69308634-69308653 MsG0280010425.01.T01:intron 5.0%
AAGTATAGATGCCCCCATCC+GGG + Chr2:69306990-69307009 None:intergenic 50.0%
CAAAAATGAAGCCCGGATGG+GGG - Chr2:69306976-69306995 MsG0280010425.01.T01:three_prime_UTR 50.0%
CCTAGTGGTACTGTCCATGA+GGG + Chr2:69308818-69308837 None:intergenic 50.0%
CTATGGTGTGTGCACCAGAA+AGG + Chr2:69308967-69308986 None:intergenic 50.0%
GAAGTATAGATGCCCCCATC+CGG + Chr2:69306991-69307010 None:intergenic 50.0%
GATAGGTCAGAAGATGGTCC+AGG + Chr2:69308890-69308909 None:intergenic 50.0%
GCAGCAAACAGCCAAATTCC+TGG - Chr2:69308869-69308888 MsG0280010425.01.T01:intron 50.0%
GTGCACCAGAAAGGACTGTA+AGG + Chr2:69308958-69308977 None:intergenic 50.0%
TATAGCTTGGAGGACCCTCA+TGG - Chr2:69308801-69308820 MsG0280010425.01.T01:intron 50.0%
TCACCCTTAGTCCCAGTAAG+AGG + Chr2:69309310-69309329 None:intergenic 50.0%
TCCTAGTGGTACTGTCCATG+AGG + Chr2:69308819-69308838 None:intergenic 50.0%
! CTTTCTGGTGCACACACCAT+AGG - Chr2:69308965-69308984 MsG0280010425.01.T01:intron 50.0%
CCCTCATGGACAGTACCACT+AGG - Chr2:69308815-69308834 MsG0280010425.01.T01:intron 55.0%
!! TTGGTGTCACCACCAGAGGT+AGG + Chr2:69309079-69309098 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69306753 69309613 69306753 ID=MsG0280010425.01;Name=MsG0280010425.01
Chr2 mRNA 69306753 69309613 69306753 ID=MsG0280010425.01.T01;Parent=MsG0280010425.01;Name=MsG0280010425.01.T01;_AED=0.49;_eAED=0.49;_QI=5|1|1|1|1|1|3|253|342
Chr2 exon 69306753 69307560 69306753 ID=MsG0280010425.01.T01:exon:26731;Parent=MsG0280010425.01.T01
Chr2 exon 69307775 69307966 69307775 ID=MsG0280010425.01.T01:exon:26730;Parent=MsG0280010425.01.T01
Chr2 exon 69309327 69309613 69309327 ID=MsG0280010425.01.T01:exon:26729;Parent=MsG0280010425.01.T01
Chr2 five_prime_UTR 69309609 69309613 69309609 ID=MsG0280010425.01.T01:five_prime_utr;Parent=MsG0280010425.01.T01
Chr2 CDS 69309327 69309608 69309327 ID=MsG0280010425.01.T01:cds;Parent=MsG0280010425.01.T01
Chr2 CDS 69307775 69307966 69307775 ID=MsG0280010425.01.T01:cds;Parent=MsG0280010425.01.T01
Chr2 CDS 69307006 69307560 69307006 ID=MsG0280010425.01.T01:cds;Parent=MsG0280010425.01.T01
Chr2 three_prime_UTR 69306753 69307005 69306753 ID=MsG0280010425.01.T01:three_prime_utr;Parent=MsG0280010425.01.T01
Gene Sequence

>MsG0280010425.01.T01

ATGTTTCACACACTTCATTTGCTTCCCTCCATTGGTAGCTTCAAGCTAGATATTTATAGATTTAACTATATGGCCACCTTGATTAAACTCTTTGTTACACTCTCTATTTGTTCTCTCTTAGCTTGTTCAACCATTAATGCACAACTTTCTCCGAACTTCTATGCAAGAACTTGTCCAAATCTCCAAACTATTGTGCGCAATGAAATGATCAAAGTTATCAAAAATGAAGCCCGGATGGGGGCATCTATACTTCGCTTGTTCTTCCATGATTGCTTTGTAAATGGATGTGATGCATCAATCTTATTGGATGATAAGGGAACATTTGTCGGTGAGAAAAATGCTGGACCTAACAAAAATTCAGCTAGGGGTTTTGAAGTGATTGATACCATTAAAACCAACGTTGAAGCTTCTTGCAAAGCCACTGTCTCTTGTGCAGATATTCTAGCACTTGCAACTAGAGATGGAATAGCACTGCTTGGAGGACCCTCATGGACAGTACCACTAGGAAGAAGAGATGCAAGAACAGCAAGTCAAAGTGCAGCAAACAGCCAAATTCCTGGACCATCTTCTGACCTATCCACACTCACTAGAATGTTTCAAAACAAAAGTCTAACATTAAATGACCTTACAGTCCTTTCTGGTGCACACACCATAGGGCAAACTGAGTGTCAATTTTTTAGAAATCGCATACACAATGAAGCCAACATTAACAGAAACCTTGCTAACTTAAGAAAAAGAAATTGTCCTACCTCTGGTGGTGACACCAATTTAGCACCCTTTGATTCTGTCACTCCAACTAAATTTGACAACAATTATTATAAGGACCTTATTGCTAATAAAGGTCTTTTACATTCTGATCAAGTTCTTTTCAATGGTGTTGGTTCTCAAATTTCTTTGGTTAGGAAGTATAGTAGAGATGGTGCTGCTTTTTCTAGAGACTTTGCTGCTGCTATGGTGAAGATGAGTAAAATTAGTCCTCTTACTGGGACTAAGGGTGAGATCAGAAAGAATTGCAGGGTTGTGAATTGA

Protein sequence

>MsG0280010425.01.T01

MFHTLHLLPSIGSFKLDIYRFNYMATLIKLFVTLSICSLLACSTINAQLSPNFYARTCPNLQTIVRNEMIKVIKNEARMGASILRLFFHDCFVNGCDASILLDDKGTFVGEKNAGPNKNSARGFEVIDTIKTNVEASCKATVSCADILALATRDGIALLGGPSWTVPLGRRDARTASQSAANSQIPGPSSDLSTLTRMFQNKSLTLNDLTVLSGAHTIGQTECQFFRNRIHNEANINRNLANLRKRNCPTSGGDTNLAPFDSVTPTKFDNNYYKDLIANKGLLHSDQVLFNGVGSQISLVRKYSRDGAAFSRDFAAAMVKMSKISPLTGTKGEIRKNCRVVN*