AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1198830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198830 MtrunA17_Chr8g0368501 87.130 575 48 4 1 550 1 574 0.0 865
Msa1198830 MtrunA17_Chr8g0390131 44.227 511 225 12 27 493 13 507 4.80e-125 381
Msa1198830 MtrunA17_Chr7g0246441 36.740 362 169 8 44 377 40 369 8.21e-65 216
Msa1198830 MtrunA17_Chr0c01g0489491 39.203 301 123 8 102 373 54 323 3.66e-61 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198830 AT1G23400.1 56.794 574 188 10 16 549 11 564 0.0 597
Msa1198830 AT2G20020.1 50.510 392 147 6 65 413 102 489 4.20e-123 378
Msa1198830 AT4G31010.1 36.607 336 163 8 93 398 75 390 4.97e-62 209
Msa1198830 AT4G31010.2 35.860 343 163 9 93 398 75 397 4.63e-59 202
Msa1198830 AT5G54890.1 36.601 306 136 8 97 374 73 348 4.35e-58 197

Find 178 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGGGTTTGTAGTATT+TGG 0.197870 8_1:+50582337 None:intergenic
TGAAATGCCGGGGCCGTTTC+CGG 0.203657 8_1:-50582030 Msa1198830:CDS
TTTGGGTTTGGTGGTGGTGG+GGG 0.227054 8_1:+50582386 None:intergenic
GGGTTTGGGTTTGGTGGTGG+TGG 0.231278 8_1:+50582383 None:intergenic
ATAGCAATTGGTTTCACTTT+TGG 0.233655 8_1:+50582200 None:intergenic
ATTAAATTCTTCTAGCAATA+AGG 0.245101 8_1:+50576874 None:intergenic
TCAGCTTTCGTTAATCCTTC+TGG 0.253371 8_1:+50579433 None:intergenic
GGAGCATCTTGTATAAGTTT+TGG 0.254544 8_1:+50579454 None:intergenic
AATATAACAAATTTGAGTTT+TGG 0.278459 8_1:-50576353 Msa1198830:three_prime_UTR
TGGTTACCTAATTTATATAT+TGG 0.286215 8_1:+50579373 None:intergenic
TGGTGTTTGAGGGCGGGGTT+TGG 0.293090 8_1:+50582368 None:intergenic
TTGGGTTTGGTGGTGGTGGG+GGG 0.293803 8_1:+50582387 None:intergenic
GTTTGGGTTTGGTGGTGGTG+GGG 0.296186 8_1:+50582385 None:intergenic
GAGATTAACTTGGCGATTAT+CGG 0.301688 8_1:+50581911 None:intergenic
AGGGCGGGGTTTGGGTTTGG+TGG 0.307637 8_1:+50582377 None:intergenic
GCGGGGTTTGGGTTTGGTGG+TGG 0.309665 8_1:+50582380 None:intergenic
ATGATGAGCAAGTATTGATT+TGG 0.312384 8_1:-50577813 Msa1198830:CDS
TTGAGGGCGGGGTTTGGGTT+TGG 0.324821 8_1:+50582374 None:intergenic
GGTGTTTGAGGGCGGGGTTT+GGG 0.325373 8_1:+50582369 None:intergenic
GGTTTGGGTTTGGTGGTGGT+GGG 0.326513 8_1:+50582384 None:intergenic
GGGTGTGATTTGCGAGGTGG+GGG 0.330023 8_1:+50582407 None:intergenic
GATGGTAGTGGGGTGGGTGA+TGG 0.332999 8_1:+50582322 None:intergenic
ATCAATTTCAAACCTCAATA+TGG 0.343079 8_1:+50581160 None:intergenic
GGGGTGTGATTTGCGAGGTG+GGG 0.350623 8_1:+50582406 None:intergenic
TTGCTAGAAGAATTTAATAT+TGG 0.361124 8_1:-50576869 Msa1198830:CDS
TTAACACCTTTCATCCCTTC+CGG 0.362703 8_1:+50582059 None:intergenic
GGGGATAGGCGGACGTGGGG+TGG 0.362867 8_1:+50582442 None:intergenic
TCTCTACTCACCCCTTCTTC+AGG 0.366333 8_1:+50581996 None:intergenic
TGATTTGGAGGGGCAAAGAT+TGG 0.366919 8_1:-50577798 Msa1198830:CDS
CTGTTGCCAATATATAAATT+AGG 0.371742 8_1:-50579379 Msa1198830:intron
ATGGTAGTGGGGTGGGTGAT+GGG 0.374597 8_1:+50582323 None:intergenic
GTCCACGGCCTCGGCATTGT+GGG 0.376828 8_1:+50582146 None:intergenic
TGGCGATTATCGGCCATCAT+AGG 0.381412 8_1:+50581921 None:intergenic
AGGCGTTCCTACTGTTGATA+TGG 0.382959 8_1:-50581196 Msa1198830:CDS
TATTGGTCCTGATGCTCTCT+TGG 0.385503 8_1:-50576852 Msa1198830:CDS
TTGCGGTGGTGTTTGAGGGC+GGG 0.388136 8_1:+50582362 None:intergenic
TGCCGGGGCCGTTTCCGGTT+GGG 0.392027 8_1:-50582025 Msa1198830:CDS
TGAGGAAGATGAGGGGTTGT+TGG 0.394566 8_1:+50582469 None:intergenic
CTCTCCCCTCCCAGCTGGTA+GGG 0.395636 8_1:-50582516 Msa1198830:CDS
TCCGTCATCATCGGCGAATC+CGG 0.401075 8_1:-50582281 Msa1198830:CDS
GGAATGGGGATAGGCGGACG+TGG 0.401246 8_1:+50582437 None:intergenic
GATAGGCGGACGTGGGGTGG+CGG 0.403490 8_1:+50582445 None:intergenic
TGCGGTGGTGTTTGAGGGCG+GGG 0.403982 8_1:+50582363 None:intergenic
CGGAGGAAGGGATGGTAGTG+GGG 0.406629 8_1:+50582312 None:intergenic
TGAAACTCGAAGGGAGCTCC+AGG 0.410584 8_1:+50582242 None:intergenic
GCCGGTTCACGGATAGCAAT+TGG 0.410726 8_1:+50582188 None:intergenic
CGGACGTGGGGTGGCGGATG+AGG 0.411998 8_1:+50582451 None:intergenic
TGAGGGGTTGTTGGGTGGTA+AGG 0.412526 8_1:+50582478 None:intergenic
AGGAAGGGATGGTAGTGGGG+TGG 0.417377 8_1:+50582315 None:intergenic
ATCTAAGCACATCAGCAAAA+TGG 0.418085 8_1:-50576954 Msa1198830:CDS
GGAGTTGCGGTGGTGTTTGA+GGG 0.421599 8_1:+50582358 None:intergenic
TGTCCACGGCCTCGGCATTG+TGG 0.423682 8_1:+50582145 None:intergenic
TCGGAGGAAGGGATGGTAGT+GGG 0.427321 8_1:+50582311 None:intergenic
GTCGGAGGAAGGGATGGTAG+TGG 0.428850 8_1:+50582310 None:intergenic
GCTTTCCCTGTCCACGGCCT+CGG 0.430447 8_1:+50582137 None:intergenic
GAGGAAGATGAGGGGTTGTT+GGG 0.434206 8_1:+50582470 None:intergenic
AAATCAACTGGTAGCGATCC+AGG 0.435156 8_1:+50576581 None:intergenic
ACCTTCTCCAAGAGAGCATC+AGG 0.436156 8_1:+50576845 None:intergenic
CACAGTATCCAGTGATGCTC+TGG 0.436749 8_1:-50579498 Msa1198830:CDS
CCTCTCCCCTCCCAGCTGGT+AGG 0.437628 8_1:-50582517 Msa1198830:CDS
TCTCCCCTCCCAGCTGGTAG+GGG 0.439404 8_1:-50582515 Msa1198830:CDS
GAACATAATAATAAGAAAAC+AGG 0.439916 8_1:-50577976 Msa1198830:CDS
CTCCCACAATGCCGAGGCCG+TGG 0.446187 8_1:-50582148 Msa1198830:CDS
GGAGAAGGTAGAAGAATTTG+AGG 0.446433 8_1:-50576831 Msa1198830:CDS
GTTGGGAAGTTTCCTGAAGA+AGG 0.448522 8_1:-50582008 Msa1198830:CDS
ACCAATTGCTATCCGTGAAC+CGG 0.450005 8_1:-50582189 Msa1198830:CDS
CCTTTCATCCCTTCCGGAGG+AGG 0.450761 8_1:+50582065 None:intergenic
AAGCTGAAGCAGATGAATTA+CGG 0.453903 8_1:-50579417 Msa1198830:CDS
GCTGGCTTCCAGAGCATCAC+TGG 0.454686 8_1:+50579490 None:intergenic
CCAACTCACCGAGATTAACT+TGG 0.455660 8_1:+50581901 None:intergenic
GGTGGCGGATGAGGAAGATG+AGG 0.456861 8_1:+50582460 None:intergenic
ACAATGCCGAGGCCGTGGAC+AGG 0.457243 8_1:-50582143 Msa1198830:CDS
TGGAGTTGCGGTGGTGTTTG+AGG 0.464560 8_1:+50582357 None:intergenic
TCTTCAGGAAACTTCCCAAC+CGG 0.465046 8_1:+50582011 None:intergenic
GGTGTGATTTGCGAGGTGGG+GGG 0.465880 8_1:+50582408 None:intergenic
GGAAACTTCCCAACCGGAAA+CGG 0.466951 8_1:+50582017 None:intergenic
GGAAGGGATGGTAGTGGGGT+GGG 0.469596 8_1:+50582316 None:intergenic
GATGATGACGGAGCGGTTGT+CGG 0.474703 8_1:+50582292 None:intergenic
GACTCGGCGACGCTTCCAAT+GGG 0.475021 8_1:+50581236 None:intergenic
CACCATGGATAGGTGTTTCA+AGG 0.476210 8_1:+50582553 None:intergenic
CAGATGAATTACGGATGAAA+GGG 0.476739 8_1:-50579408 Msa1198830:CDS
GTGGCGGATGAGGAAGATGA+GGG 0.479280 8_1:+50582461 None:intergenic
TTCCCAACCGGAAACGGCCC+CGG 0.479889 8_1:+50582023 None:intergenic
TTTGGATAAACAGGAGCAGC+TGG 0.481573 8_1:+50579472 None:intergenic
CTTGTAATGGTAGCCTCAGC+AGG 0.481758 8_1:+50577742 None:intergenic
CGATGAGTTTAATGATATAG+TGG 0.484106 8_1:-50576618 Msa1198830:CDS
GCAGATGAATTACGGATGAA+AGG 0.487486 8_1:-50579409 Msa1198830:CDS
GTGAGTAGAGAGGAGATACT+TGG 0.489608 8_1:-50581984 Msa1198830:CDS
GTCTGTAAAATTCGTTGTAA+AGG 0.490421 8_1:-50581216 Msa1198830:CDS
GGCGTCTCCTACCTTCTCCC+TGG 0.492972 8_1:-50582260 Msa1198830:CDS
ATGCCGGGGCCGTTTCCGGT+TGG 0.495232 8_1:-50582026 Msa1198830:CDS
AATGGGGATAGGCGGACGTG+GGG 0.497008 8_1:+50582439 None:intergenic
TTATCCTCTCCCCTCCCAGC+TGG 0.498105 8_1:-50582521 Msa1198830:CDS
GGCATTGTGGGAGGTTCAAA+CGG 0.500096 8_1:+50582158 None:intergenic
GTTGCGGTGGTGTTTGAGGG+CGG 0.500745 8_1:+50582361 None:intergenic
TTATCAACAAGCAAATCAAC+TGG 0.501371 8_1:+50576569 None:intergenic
CGAAGGGAGCTCCAGGGAGA+AGG 0.502185 8_1:+50582249 None:intergenic
TAATGTTTGCCGCCATATTG+AGG 0.502809 8_1:-50581172 Msa1198830:intron
CAATGCCGAGGCCGTGGACA+GGG 0.503686 8_1:-50582142 Msa1198830:CDS
CTCCCCTCCCAGCTGGTAGG+GGG 0.503818 8_1:-50582514 Msa1198830:CDS
TGTGTAAATTAGCAAATAGC+TGG 0.506946 8_1:-50576482 Msa1198830:three_prime_UTR
TGAAGAAGTAAATGCTGGAT+AGG 0.509878 8_1:+50576784 None:intergenic
TAAGCTCAAACTAAGACAAA+AGG 0.509879 8_1:-50576549 Msa1198830:CDS
TGCACCTCCCACTTCTTAAG+CGG 0.514241 8_1:+50581957 None:intergenic
TTGGGAAGTTTCCTGAAGAA+GGG 0.515141 8_1:-50582007 Msa1198830:CDS
GAGAAGGTAGAAGAATTTGA+GGG 0.515767 8_1:-50576830 Msa1198830:CDS
AACGGTGCTTTCCCTGTCCA+CGG 0.517992 8_1:+50582131 None:intergenic
TCACTTGAAGAAGTAAATGC+TGG 0.520739 8_1:+50576779 None:intergenic
GGGGTTGTTGGGTGGTAAGG+AGG 0.521292 8_1:+50582481 None:intergenic
ATGAGCAAGTATTGATTTGG+AGG 0.523499 8_1:-50577810 Msa1198830:CDS
ACGGAGCGGTTGTCGGAGGA+AGG 0.523999 8_1:+50582299 None:intergenic
CCGTCATGACAGGAGAAAGC+AGG 0.528302 8_1:-50579595 Msa1198830:intron
TGGCGGATGAGGAAGATGAG+GGG 0.534617 8_1:+50582462 None:intergenic
TTCTTCTTCGACTTCTTCAA+CGG 0.536586 8_1:+50582113 None:intergenic
TCGTTTAATCCTCCTCCGGA+AGG 0.538069 8_1:-50582074 Msa1198830:CDS
TGTTAAGAAAGTTGAAATGC+CGG 0.538229 8_1:-50582042 Msa1198830:CDS
CTGGATACTGTGGACGAGTA+CGG 0.540010 8_1:+50579509 None:intergenic
AGACTCGGCGACGCTTCCAA+TGG 0.540047 8_1:+50581235 None:intergenic
TGATTCGTTTAATCCTCCTC+CGG 0.541927 8_1:-50582078 Msa1198830:CDS
GTGGATACATCAGCTGAACC+TGG 0.543194 8_1:-50576599 Msa1198830:CDS
TCCTGATGCTCTCTTGGAGA+AGG 0.544608 8_1:-50576846 Msa1198830:CDS
GAATGGGGATAGGCGGACGT+GGG 0.544610 8_1:+50582438 None:intergenic
CACGGCCTCGGCATTGTGGG+AGG 0.545118 8_1:+50582149 None:intergenic
TGGAGTTAATACATTCCCAT+TGG 0.549668 8_1:-50581251 Msa1198830:CDS
GACAACCGCTCCGTCATCAT+CGG 0.550089 8_1:-50582290 Msa1198830:CDS
CCTCCTCCGGAAGGGATGAA+AGG 0.553704 8_1:-50582065 Msa1198830:CDS
GTTAAGAAAGTTGAAATGCC+GGG 0.557025 8_1:-50582041 Msa1198830:CDS
TGGGTGGTAAGGAGGAGAAG+AGG 0.564932 8_1:+50582489 None:intergenic
GCGGTTGTCGGAGGAAGGGA+TGG 0.565134 8_1:+50582304 None:intergenic
GGGAGCTCCAGGGAGAAGGT+AGG 0.573674 8_1:+50582253 None:intergenic
CCTACCAGCTGGGAGGGGAG+AGG 0.577642 8_1:+50582517 None:intergenic
CGTTTAATCCTCCTCCGGAA+GGG 0.578528 8_1:-50582073 Msa1198830:CDS
GCCGGATTCGCCGATGATGA+CGG 0.582513 8_1:+50582280 None:intergenic
TGGATTAACGCATAACATGT+TGG 0.584391 8_1:-50581271 Msa1198830:CDS
TTGGTGAGCCGCTTAAGAAG+TGG 0.586181 8_1:-50581965 Msa1198830:CDS
GAAAACAGCTATTCAAGTGA+TGG 0.586188 8_1:-50576713 Msa1198830:CDS
CGTCATGACAGGAGAAAGCA+GGG 0.589855 8_1:-50579594 Msa1198830:intron
TGGTGAGCCGCTTAAGAAGT+GGG 0.592158 8_1:-50581964 Msa1198830:CDS
GAAGATGAGGGGTTGTTGGG+TGG 0.592492 8_1:+50582473 None:intergenic
GGGAAAATAATTCATCGAGC+TGG 0.592781 8_1:-50579571 Msa1198830:CDS
GGTAGTTGTAATTTCTGCCA+CGG 0.594943 8_1:+50579530 None:intergenic
CGGAGCGGTTGTCGGAGGAA+GGG 0.596973 8_1:+50582300 None:intergenic
CACCTTGAAACACCTATCCA+TGG 0.597038 8_1:-50582555 Msa1198830:exon
AAAATAATTCATCGAGCTGG+CGG 0.598507 8_1:-50579568 Msa1198830:CDS
GTTTGTAGTATTTGGAGTTG+CGG 0.601763 8_1:+50582345 None:intergenic
AGGGAGAAGGTAGGAGACGC+CGG 0.602148 8_1:+50582262 None:intergenic
ATGCAACTAGCACCATGGAT+AGG 0.602321 8_1:+50582543 None:intergenic
TGGGAAGTTTCCTGAAGAAG+GGG 0.603738 8_1:-50582006 Msa1198830:CDS
ACAAGTGATTTAGAAAACAA+AGG 0.603835 8_1:-50577724 Msa1198830:intron
TGAAGAAGGGGTGAGTAGAG+AGG 0.605646 8_1:-50581994 Msa1198830:CDS
CTTATACAAGATGCTCCAGA+AGG 0.609269 8_1:-50579448 Msa1198830:CDS
GTAACTGAACTGAAACTCGA+AGG 0.612467 8_1:+50582232 None:intergenic
ACATTATCCATATCAACAGT+AGG 0.612759 8_1:+50581189 None:intergenic
TCAAATGTATACCTTCAAGA+TGG 0.613296 8_1:-50576740 Msa1198830:CDS
TGTAGTATTTGGAGTTGCGG+TGG 0.615830 8_1:+50582348 None:intergenic
AATGCTTGTTAAGCCTATGA+TGG 0.616220 8_1:-50581934 Msa1198830:CDS
GATAATCGCCAAGTTAATCT+CGG 0.621259 8_1:-50581909 Msa1198830:intron
TGAGCAAGTATTGATTTGGA+GGG 0.622019 8_1:-50577809 Msa1198830:CDS
GATGACGGAGCGGTTGTCGG+AGG 0.622037 8_1:+50582295 None:intergenic
TAACTGAACTGAAACTCGAA+GGG 0.632131 8_1:+50582233 None:intergenic
TCATGACAGGAGAAAGCAGG+GGG 0.635654 8_1:-50579592 Msa1198830:intron
TTGAACCTCCCACAATGCCG+AGG 0.638283 8_1:-50582154 Msa1198830:CDS
TCGAAAGACAATAGCACACA+AGG 0.641203 8_1:+50577835 None:intergenic
ACACCTTTCATCCCTTCCGG+AGG 0.653893 8_1:+50582062 None:intergenic
CAGAGCATCACTGGATACTG+TGG 0.656560 8_1:+50579499 None:intergenic
GAGCAAGTATTGATTTGGAG+GGG 0.659120 8_1:-50577808 Msa1198830:CDS
TTAAGAAAGTTGAAATGCCG+GGG 0.666363 8_1:-50582040 Msa1198830:CDS
AATTTCAAACCTCAATATGG+CGG 0.667944 8_1:+50581163 None:intergenic
GAAACTCGAAGGGAGCTCCA+GGG 0.672773 8_1:+50582243 None:intergenic
ACAATGTTAATCAGGCGAGG+TGG 0.679462 8_1:-50576987 Msa1198830:intron
GGATAATGCAACTAGCACCA+TGG 0.688445 8_1:+50582538 None:intergenic
GTAATGGTAGCCTCAGCAGG+AGG 0.691805 8_1:+50577745 None:intergenic
GTCATGACAGGAGAAAGCAG+GGG 0.731907 8_1:-50579593 Msa1198830:intron
GGATTAAACGAATCAAACAG+CGG 0.734775 8_1:+50582086 None:intergenic
ATTCGCCGATGATGACGGAG+CGG 0.738752 8_1:+50582285 None:intergenic
TGAGCCGCTTAAGAAGTGGG+AGG 0.754394 8_1:-50581961 Msa1198830:CDS
TGCTGGATAGGAGTGCTCTG+TGG 0.761532 8_1:+50576796 None:intergenic
CATGACAGGAGAAAGCAGGG+GGG 0.794713 8_1:-50579591 Msa1198830:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATGACTAAAATTAT+TGG + chr8_1:50578258-50578277 None:intergenic 10.0%
!!! ATATAGAAAATGAAATATTT+TGG + chr8_1:50580723-50580742 None:intergenic 10.0%
!!! TATATCTATCTATTCTAAAA+TGG + chr8_1:50577546-50577565 None:intergenic 15.0%
!!! ATTTTATAGATGTTATGATA+TGG + chr8_1:50578198-50578217 None:intergenic 15.0%
!! TCACAAGTTATAAATTATAT+GGG + chr8_1:50579023-50579042 None:intergenic 15.0%
!! ATAAAGTCTAAACAAAAAAT+GGG + chr8_1:50579098-50579117 None:intergenic 15.0%
!! TATAAAGTCTAAACAAAAAA+TGG + chr8_1:50579099-50579118 None:intergenic 15.0%
!!! TTTAGGTTTACTATTTAAAA+AGG - chr8_1:50579685-50579704 Msa1198830:intron 15.0%
!! TAATCAAAATCAAGTAAAAT+AGG - chr8_1:50579954-50579973 Msa1198830:intron 15.0%
!! AATAAGTTTAACGTTTATAT+TGG + chr8_1:50580493-50580512 None:intergenic 15.0%
!!! TATTTCACTATAAATTTTTC+TGG - chr8_1:50580688-50580707 Msa1198830:intron 15.0%
!!! TTTCTATTTTGTATCATATA+TGG - chr8_1:50581850-50581869 Msa1198830:intron 15.0%
!! TATATGGTAAAATATAACAT+TGG - chr8_1:50581866-50581885 Msa1198830:intron 15.0%
!! TATATAAATGATTCAGATTG+TGG - chr8_1:50577459-50577478 Msa1198830:intron 20.0%
!! ACTAATATGTAAAACTATGT+AGG - chr8_1:50578298-50578317 Msa1198830:intron 20.0%
!! AACTATAATAAACATCCATT+TGG - chr8_1:50578595-50578614 Msa1198830:intron 20.0%
!! TACAGATTATCAAAATTCAA+AGG - chr8_1:50578801-50578820 Msa1198830:intron 20.0%
!! ACAGATTATCAAAATTCAAA+GGG - chr8_1:50578802-50578821 Msa1198830:intron 20.0%
!! GTCACAAGTTATAAATTATA+TGG + chr8_1:50579024-50579043 None:intergenic 20.0%
!! TAAAGTCTAAACAAAAAATG+GGG + chr8_1:50579097-50579116 None:intergenic 20.0%
!! TGGTTACCTAATTTATATAT+TGG + chr8_1:50579542-50579561 None:intergenic 20.0%
!!! ATGGTCAAATCTTTTTATTT+GGG + chr8_1:50579795-50579814 None:intergenic 20.0%
!!! TATGGTCAAATCTTTTTATT+TGG + chr8_1:50579796-50579815 None:intergenic 20.0%
!!! AACATTATAAGAGTACTTTA+TGG + chr8_1:50580025-50580044 None:intergenic 20.0%
!!! ACATCAAAATTATTTAGTTC+AGG + chr8_1:50580330-50580349 None:intergenic 20.0%
!! TAGAAAAAATGTACATACTT+GGG - chr8_1:50580420-50580439 Msa1198830:intron 20.0%
!! ACGTTAAACTTATTACATAA+AGG - chr8_1:50580499-50580518 Msa1198830:intron 20.0%
!! CGTTAAACTTATTACATAAA+GGG - chr8_1:50580500-50580519 Msa1198830:intron 20.0%
!! GTTAAACTTATTACATAAAG+GGG - chr8_1:50580501-50580520 Msa1198830:intron 20.0%
!! TTAAACTTATTACATAAAGG+GGG - chr8_1:50580502-50580521 Msa1198830:intron 20.0%
!!! AAAATGAAATATTTTGGTAG+TGG + chr8_1:50580717-50580736 None:intergenic 20.0%
!! GAACATAATAATAAGAAAAC+AGG - chr8_1:50580936-50580955 Msa1198830:intron 20.0%
!! GTTTGAGAAAGAAAAAAAAT+TGG - chr8_1:50581216-50581235 Msa1198830:CDS 20.0%
!! AGAATAAATCTTTCTATTCA+TGG + chr8_1:50581529-50581548 None:intergenic 20.0%
!!! ATGATTTTACAATGTTAATC+AGG - chr8_1:50581917-50581936 Msa1198830:CDS 20.0%
!! ATTAAATTCTTCTAGCAATA+AGG + chr8_1:50582041-50582060 None:intergenic 20.0%
!! TTGCTAGAAGAATTTAATAT+TGG - chr8_1:50582043-50582062 Msa1198830:CDS 20.0%
! TCCATTTCTCAAATTAGTAT+TGG - chr8_1:50577329-50577348 Msa1198830:intron 25.0%
! ACCAATACTAATTTGAGAAA+TGG + chr8_1:50577333-50577352 None:intergenic 25.0%
! GATAGATATATTGTGAATTG+TGG - chr8_1:50577556-50577575 Msa1198830:intron 25.0%
! TGTATTGTGTTAATGATGTT+TGG - chr8_1:50577591-50577610 Msa1198830:intron 25.0%
!!! GGTTTTTGATTTTATGATTC+AGG - chr8_1:50577612-50577631 Msa1198830:intron 25.0%
!!! TTTGATTTTATGATTCAGGA+AGG - chr8_1:50577616-50577635 Msa1198830:intron 25.0%
!! TTGATTTTATGATTCAGGAA+GGG - chr8_1:50577617-50577636 Msa1198830:intron 25.0%
! ATCAATTTCAAACCTCAATA+TGG + chr8_1:50577755-50577774 None:intergenic 25.0%
!!! TTATGCAAGTGTTTTTATGT+TGG + chr8_1:50577812-50577831 None:intergenic 25.0%
! TACATTGTCGTCAAAAAATA+GGG + chr8_1:50578050-50578069 None:intergenic 25.0%
! TTACATTGTCGTCAAAAAAT+AGG + chr8_1:50578051-50578070 None:intergenic 25.0%
!! ATGTTATGATATGGAGTATT+AGG + chr8_1:50578189-50578208 None:intergenic 25.0%
! ACTAAAATTATTGGACTTTC+CGG + chr8_1:50578249-50578268 None:intergenic 25.0%
!!! TAGTTTTACATATTAGTCGA+TGG + chr8_1:50578295-50578314 None:intergenic 25.0%
! AAACAGTTATGTGTCAAATT+AGG - chr8_1:50578380-50578399 Msa1198830:intron 25.0%
!!! TATTCTCTTTAGGATAGTTT+TGG - chr8_1:50578496-50578515 Msa1198830:intron 25.0%
! ATAATAAACATCCATTTGGA+AGG - chr8_1:50578599-50578618 Msa1198830:intron 25.0%
! AAATTCATTACTGGTACTAA+TGG - chr8_1:50578715-50578734 Msa1198830:intron 25.0%
!!! TTCAAGTTGAATGTATTGTT+AGG - chr8_1:50578907-50578926 Msa1198830:intron 25.0%
!!! TCAAGTTGAATGTATTGTTA+GGG - chr8_1:50578908-50578927 Msa1198830:intron 25.0%
! TTCATTAGTTAGGTAAATAG+CGG - chr8_1:50578974-50578993 Msa1198830:intron 25.0%
!! ATTTATAACTTGTGACTGAA+AGG - chr8_1:50579028-50579047 Msa1198830:intron 25.0%
! CAATGAAATCTATATCTGTT+GGG + chr8_1:50579194-50579213 None:intergenic 25.0%
! TCAATGAAATCTATATCTGT+TGG + chr8_1:50579195-50579214 None:intergenic 25.0%
!!! TGTATAAGTTTTGGATAAAC+AGG + chr8_1:50579452-50579471 None:intergenic 25.0%
! CTGTTGCCAATATATAAATT+AGG - chr8_1:50579533-50579552 Msa1198830:CDS 25.0%
! GAGATCTAAAAGTTAATAGA+TGG + chr8_1:50579562-50579581 None:intergenic 25.0%
! TTCCTTAGATTCAAATCTTT+AGG - chr8_1:50579668-50579687 Msa1198830:intron 25.0%
! AACCTAAAGATTTGAATCTA+AGG + chr8_1:50579673-50579692 None:intergenic 25.0%
! GGTTTACTATTTAAAAAGGT+TGG - chr8_1:50579689-50579708 Msa1198830:intron 25.0%
!!! ATCTTTTGTTTAGTAGAGTA+AGG - chr8_1:50579858-50579877 Msa1198830:intron 25.0%
! TTGATATTGCATTCTACTTT+AGG - chr8_1:50580043-50580062 Msa1198830:intron 25.0%
! TGATATTGCATTCTACTTTA+GGG - chr8_1:50580044-50580063 Msa1198830:intron 25.0%
! CCTAATTTCTTATAATCACT+GGG + chr8_1:50580234-50580253 None:intergenic 25.0%
! ACCTAATTTCTTATAATCAC+TGG + chr8_1:50580235-50580254 None:intergenic 25.0%
! AGAATTAATTCAAAGTGTAG+AGG - chr8_1:50580372-50580391 Msa1198830:intron 25.0%
! GAATTAATTCAAAGTGTAGA+GGG - chr8_1:50580373-50580392 Msa1198830:intron 25.0%
! GTAGAAAAAATGTACATACT+TGG - chr8_1:50580419-50580438 Msa1198830:intron 25.0%
!! TTTTCATATTTTCATCTCTC+TGG - chr8_1:50580602-50580621 Msa1198830:intron 25.0%
! TTATGCTAAAAGTGATCATT+AGG - chr8_1:50580625-50580644 Msa1198830:intron 25.0%
! AGGTCTATCTTTAAATTTCA+AGG - chr8_1:50580645-50580664 Msa1198830:intron 25.0%
! AAATAATCATTCCTTGGTAA+GGG + chr8_1:50580673-50580692 None:intergenic 25.0%
! ATAGTGAAATAATCATTCCT+TGG + chr8_1:50580679-50580698 None:intergenic 25.0%
!!! TTTTCTATATTTTGGCTCTA+GGG - chr8_1:50580823-50580842 Msa1198830:intron 25.0%
! AATAATTGCAGCAATACTTA+AGG + chr8_1:50581000-50581019 None:intergenic 25.0%
!! GTTTTCTAAATCACTTGTAA+TGG + chr8_1:50581186-50581205 None:intergenic 25.0%
! ACAAGTGATTTAGAAAACAA+AGG - chr8_1:50581188-50581207 Msa1198830:CDS 25.0%
!! TTTTGTATGGATTTCTTCTA+CGG - chr8_1:50581500-50581519 Msa1198830:intron 25.0%
! GAATTAGATTATGAAGAGTT+TGG - chr8_1:50581615-50581634 Msa1198830:intron 25.0%
! TACATACAATGACAATTGTT+TGG - chr8_1:50581641-50581660 Msa1198830:intron 25.0%
! ACATACAATGACAATTGTTT+GGG - chr8_1:50581642-50581661 Msa1198830:intron 25.0%
! CAATTATAACACAAACAGAT+AGG + chr8_1:50581829-50581848 None:intergenic 25.0%
! CTATCTGTTTGTGTTATAAT+TGG - chr8_1:50581827-50581846 Msa1198830:intron 25.0%
!!! ATAACATTGGTTGATAACAT+TGG - chr8_1:50581879-50581898 Msa1198830:intron 25.0%
!! ATAGCAATTGGTTTCACTTT+TGG + chr8_1:50576715-50576734 None:intergenic 30.0%
TGTTAAGAAAGTTGAAATGC+CGG - chr8_1:50576870-50576889 Msa1198830:CDS 30.0%
AACAATGATCGACAATATCA+AGG + chr8_1:50577063-50577082 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+CGG - chr8_1:50577230-50577249 Msa1198830:intron 30.0%
! TCTAAAATGGTATTCCAGAA+TGG + chr8_1:50577533-50577552 None:intergenic 30.0%
GATATATTGTGAATTGTGGA+AGG - chr8_1:50577560-50577579 Msa1198830:intron 30.0%
! TACAACGAATTTTACAGACT+CGG + chr8_1:50577695-50577714 None:intergenic 30.0%
GTCTGTAAAATTCGTTGTAA+AGG - chr8_1:50577696-50577715 Msa1198830:intron 30.0%
ACATTATCCATATCAACAGT+AGG + chr8_1:50577726-50577745 None:intergenic 30.0%
AATTTCAAACCTCAATATGG+CGG + chr8_1:50577752-50577771 None:intergenic 30.0%
CACTTGCATAATATCATTCT+TGG - chr8_1:50577821-50577840 Msa1198830:CDS 30.0%
! ATGAATAGGATTTTCTGTAC+AGG + chr8_1:50577954-50577973 None:intergenic 30.0%
TATTAGGCATGTTGGTATTA+AGG + chr8_1:50578173-50578192 None:intergenic 30.0%
TGTCATCAACTACTATTTGA+TGG - chr8_1:50578221-50578240 Msa1198830:intron 30.0%
CCTACTTATGTCATATACTA+CGG + chr8_1:50578428-50578447 None:intergenic 30.0%
CGTAGTATATGACATAAGTA+GGG - chr8_1:50578426-50578445 Msa1198830:intron 30.0%
GTAGTATATGACATAAGTAG+GGG - chr8_1:50578427-50578446 Msa1198830:intron 30.0%
TAGTATATGACATAAGTAGG+GGG - chr8_1:50578428-50578447 Msa1198830:intron 30.0%
!! CAGTAATGAATTTCTAGCTT+AGG + chr8_1:50578708-50578727 None:intergenic 30.0%
CTAAGCTAGAAATTCATTAC+TGG - chr8_1:50578706-50578725 Msa1198830:intron 30.0%
ATCTGTATAACTCTGTTATG+AGG + chr8_1:50578788-50578807 None:intergenic 30.0%
TATCAAAATTCAAAGGGAAC+AGG - chr8_1:50578808-50578827 Msa1198830:intron 30.0%
AACAAGAAGTCTCTCAAAAT+GGG - chr8_1:50578849-50578868 Msa1198830:intron 30.0%
! TTGTTAGGGTATCTCATTTA+AGG - chr8_1:50578922-50578941 Msa1198830:intron 30.0%
! TAAATAGCGGAAATCAGATT+GGG - chr8_1:50578987-50579006 Msa1198830:intron 30.0%
GATCGAAAGAATTAAAGGAT+GGG + chr8_1:50579145-50579164 None:intergenic 30.0%
AGATCGAAAGAATTAAAGGA+TGG + chr8_1:50579146-50579165 None:intergenic 30.0%
ATCCTTTAATTCTTTCGATC+TGG - chr8_1:50579145-50579164 Msa1198830:intron 30.0%
TCCTTTAATTCTTTCGATCT+GGG - chr8_1:50579146-50579165 Msa1198830:intron 30.0%
CAACAATCAACTTTAATGCA+CGG + chr8_1:50579257-50579276 None:intergenic 30.0%
!!! AGATGCTTTTGACTTCTTAA+GGG - chr8_1:50579818-50579837 Msa1198830:intron 30.0%
TTTGAGTGCAAAATCTTAGT+TGG - chr8_1:50579923-50579942 Msa1198830:intron 30.0%
GATATTGCATTCTACTTTAG+GGG - chr8_1:50580045-50580064 Msa1198830:intron 30.0%
AAACATCTCATTTACTTGTG+TGG - chr8_1:50580108-50580127 Msa1198830:intron 30.0%
! TGTTGTGTATACTCCATTTT+TGG + chr8_1:50580142-50580161 None:intergenic 30.0%
CCCAGTGATTATAAGAAATT+AGG - chr8_1:50580231-50580250 Msa1198830:intron 30.0%
GAAATAATCATTCCTTGGTA+AGG + chr8_1:50580674-50580693 None:intergenic 30.0%
!! ATTAGCTTACTTTTGTTGTC+AGG - chr8_1:50580799-50580818 Msa1198830:intron 30.0%
! TGTCAGGCTTTTCTATATTT+TGG - chr8_1:50580815-50580834 Msa1198830:intron 30.0%
!!! CTTTTCTATATTTTGGCTCT+AGG - chr8_1:50580822-50580841 Msa1198830:intron 30.0%
TACTGCAACAAAATATGCTT+TGG - chr8_1:50580876-50580895 Msa1198830:intron 30.0%
! GCAATTTGATCTTTTTGCTT+TGG - chr8_1:50581042-50581061 Msa1198830:intron 30.0%
!! ATGATGAGCAAGTATTGATT+TGG - chr8_1:50581099-50581118 Msa1198830:intron 30.0%
! CGTATTTTGTGTTTACAATG+TGG - chr8_1:50581356-50581375 Msa1198830:intron 30.0%
TCTGTTCTTAAAACAGAGTA+GGG - chr8_1:50581415-50581434 Msa1198830:intron 30.0%
AACCTTTATAATGTGATGGT+GGG - chr8_1:50581665-50581684 Msa1198830:intron 30.0%
TACATGATCATCTATGACAT+CGG + chr8_1:50581800-50581819 None:intergenic 30.0%
! TCCACAGAGATAACATTTTT+GGG + chr8_1:50581994-50582013 None:intergenic 30.0%
! TTCCACAGAGATAACATTTT+TGG + chr8_1:50581995-50582014 None:intergenic 30.0%
TCAAATGTATACCTTCAAGA+TGG - chr8_1:50582172-50582191 Msa1198830:CDS 30.0%
CGATGAGTTTAATGATATAG+TGG - chr8_1:50582294-50582313 Msa1198830:CDS 30.0%
TTATCAACAAGCAAATCAAC+TGG + chr8_1:50582346-50582365 None:intergenic 30.0%
TAAGCTCAAACTAAGACAAA+AGG - chr8_1:50582363-50582382 Msa1198830:CDS 30.0%
TGTGTAAATTAGCAAATAGC+TGG - chr8_1:50582430-50582449 Msa1198830:CDS 30.0%
! GTTTGTAGTATTTGGAGTTG+CGG + chr8_1:50576570-50576589 None:intergenic 35.0%
TAACTGAACTGAAACTCGAA+GGG + chr8_1:50576682-50576701 None:intergenic 35.0%
!!! TGGTTTCACTTTTGGAGTTT+CGG + chr8_1:50576707-50576726 None:intergenic 35.0%
TTCTTCTTCGACTTCTTCAA+CGG + chr8_1:50576802-50576821 None:intergenic 35.0%
GGATTAAACGAATCAAACAG+CGG + chr8_1:50576829-50576848 None:intergenic 35.0%
GTTAAGAAAGTTGAAATGCC+GGG - chr8_1:50576871-50576890 Msa1198830:CDS 35.0%
TTAAGAAAGTTGAAATGCCG+GGG - chr8_1:50576872-50576891 Msa1198830:CDS 35.0%
! AATGCTTGTTAAGCCTATGA+TGG - chr8_1:50576978-50576997 Msa1198830:intron 35.0%
! GAGATTAACTTGGCGATTAT+CGG + chr8_1:50577004-50577023 None:intergenic 35.0%
GATAATCGCCAAGTTAATCT+CGG - chr8_1:50577003-50577022 Msa1198830:intron 35.0%
ATGCCTTCAATCAGAAATGT+CGG + chr8_1:50577111-50577130 None:intergenic 35.0%
!! TGATTGAAGGCATTAGATGT+AGG - chr8_1:50577118-50577137 Msa1198830:intron 35.0%
TCATGTTCTCAAATTAGTCC+TGG + chr8_1:50577205-50577224 None:intergenic 35.0%
! TTTTATGATTCAGGAAGGGA+TGG - chr8_1:50577621-50577640 Msa1198830:intron 35.0%
TGGATTAACGCATAACATGT+TGG - chr8_1:50577641-50577660 Msa1198830:intron 35.0%
TGGAGTTAATACATTCCCAT+TGG - chr8_1:50577661-50577680 Msa1198830:intron 35.0%
TATCATTCTTGGCTGAGTAT+AGG - chr8_1:50577832-50577851 Msa1198830:CDS 35.0%
AGTATAGGATTGTGCACAAT+GGG - chr8_1:50577847-50577866 Msa1198830:CDS 35.0%
CTTCATGCATTTGCATGAAT+AGG + chr8_1:50577968-50577987 None:intergenic 35.0%
ATATACCAACCCTTCACAAA+TGG - chr8_1:50578016-50578035 Msa1198830:intron 35.0%
TATACCAACCCTTCACAAAT+GGG - chr8_1:50578017-50578036 Msa1198830:intron 35.0%
!! GTTTGAGACTACAGGATTTT+GGG + chr8_1:50578121-50578140 None:intergenic 35.0%
!! TGTTTGAGACTACAGGATTT+TGG + chr8_1:50578122-50578141 None:intergenic 35.0%
ATGTTGGTATTAAGGATGGT+TGG + chr8_1:50578165-50578184 None:intergenic 35.0%
! ATATGGAGTATTAGGCATGT+TGG + chr8_1:50578181-50578200 None:intergenic 35.0%
CCGTAGTATATGACATAAGT+AGG - chr8_1:50578425-50578444 Msa1198830:intron 35.0%
AGGTTCTTACGATGTGTATT+CGG - chr8_1:50578456-50578475 Msa1198830:intron 35.0%
GGACAGAGTATATTCTCTTT+AGG - chr8_1:50578486-50578505 Msa1198830:intron 35.0%
TCACAAAGTTGTACATCCTA+TGG + chr8_1:50578646-50578665 None:intergenic 35.0%
!! TTCTAGCTTAGGATGTAAGT+AGG + chr8_1:50578697-50578716 None:intergenic 35.0%
AAATTCAAAGGGAACAGGAA+TGG - chr8_1:50578813-50578832 Msa1198830:intron 35.0%
CAACAAGAAGTCTCTCAAAA+TGG - chr8_1:50578848-50578867 Msa1198830:intron 35.0%
AGTCTGTCAGTTCATTAGTT+AGG - chr8_1:50578964-50578983 Msa1198830:intron 35.0%
! GTAAATAGCGGAAATCAGAT+TGG - chr8_1:50578986-50579005 Msa1198830:intron 35.0%
! AAATAGCGGAAATCAGATTG+GGG - chr8_1:50578988-50579007 Msa1198830:intron 35.0%
AAAGGAAAGATCCATTGTGA+AGG - chr8_1:50579046-50579065 Msa1198830:intron 35.0%
AAGGAAAGATCCATTGTGAA+GGG - chr8_1:50579047-50579066 Msa1198830:intron 35.0%
ACCCAGATCGAAAGAATTAA+AGG + chr8_1:50579150-50579169 None:intergenic 35.0%
AATGTTTATACCGTCATGAC+AGG - chr8_1:50579307-50579326 Msa1198830:intron 35.0%
AAAATAATTCATCGAGCTGG+CGG - chr8_1:50579344-50579363 Msa1198830:intron 35.0%
!! GGAGCATCTTGTATAAGTTT+TGG + chr8_1:50579461-50579480 None:intergenic 35.0%
AAGCTGAAGCAGATGAATTA+CGG - chr8_1:50579495-50579514 Msa1198830:CDS 35.0%
CAGATGAATTACGGATGAAA+GGG - chr8_1:50579504-50579523 Msa1198830:CDS 35.0%
ATAGAGTAATTGCAGTCACA+AGG - chr8_1:50579633-50579652 Msa1198830:intron 35.0%
!! GAAGTCAAAAGCATCTCATA+TGG + chr8_1:50579814-50579833 None:intergenic 35.0%
!!! GAGATGCTTTTGACTTCTTA+AGG - chr8_1:50579817-50579836 Msa1198830:intron 35.0%
!!! GATGCTTTTGACTTCTTAAG+GGG - chr8_1:50579819-50579838 Msa1198830:intron 35.0%
TGCAGTCAATCTTAACCAAA+TGG + chr8_1:50580200-50580219 None:intergenic 35.0%
TTTGGTTAAGATTGACTGCA+AGG - chr8_1:50580200-50580219 Msa1198830:intron 35.0%
TTGGTTAAGATTGACTGCAA+GGG - chr8_1:50580201-50580220 Msa1198830:intron 35.0%
ACATCCTTTGAGCATAATGT+AGG + chr8_1:50580401-50580420 None:intergenic 35.0%
TTGGATAGAGAACAAACACT+TGG + chr8_1:50580474-50580493 None:intergenic 35.0%
! GGTTCTGTAGTTGATTAGTT+TGG - chr8_1:50580523-50580542 Msa1198830:intron 35.0%
! TTTGATCTTTTTGCTTTGGC+AGG - chr8_1:50581046-50581065 Msa1198830:intron 35.0%
!! ATGAGCAAGTATTGATTTGG+AGG - chr8_1:50581102-50581121 Msa1198830:intron 35.0%
!! TGAGCAAGTATTGATTTGGA+GGG - chr8_1:50581103-50581122 Msa1198830:intron 35.0%
! TATTGAAAGTCTTGTCCGAA+TGG - chr8_1:50581253-50581272 Msa1198830:CDS 35.0%
TACTGTAGAAGAGTTCCATT+CGG + chr8_1:50581271-50581290 None:intergenic 35.0%
TTATAAGCAATCCCACATCT+AGG - chr8_1:50581382-50581401 Msa1198830:intron 35.0%
ACCATTTCTTACCTAGATGT+GGG + chr8_1:50581396-50581415 None:intergenic 35.0%
GTCTGTTCTTAAAACAGAGT+AGG - chr8_1:50581414-50581433 Msa1198830:intron 35.0%
CTGTTCTTAAAACAGAGTAG+GGG - chr8_1:50581416-50581435 Msa1198830:intron 35.0%
AGAAATGCATTTGTGCATTG+AGG - chr8_1:50581549-50581568 Msa1198830:intron 35.0%
!!! GGTTTTGGTTAATTTTCTCG+AGG - chr8_1:50581570-50581589 Msa1198830:intron 35.0%
! GTTAATTTTCTCGAGGTAGT+TGG - chr8_1:50581577-50581596 Msa1198830:intron 35.0%
! AGGTAGTTGGAAGTATAGAA+TGG - chr8_1:50581590-50581609 Msa1198830:intron 35.0%
TGGGAACCTTTATAATGTGA+TGG - chr8_1:50581661-50581680 Msa1198830:intron 35.0%
GAACCTTTATAATGTGATGG+TGG - chr8_1:50581664-50581683 Msa1198830:intron 35.0%
! ACCTTTATAATGTGATGGTG+GGG - chr8_1:50581666-50581685 Msa1198830:intron 35.0%
TTCGAAGAAACTTCATTCAC+TGG + chr8_1:50581728-50581747 None:intergenic 35.0%
TCTTCGAAATTTCTTCGACA+TGG - chr8_1:50581740-50581759 Msa1198830:intron 35.0%
TATATTATCCATTCCCAGAG+AGG + chr8_1:50581771-50581790 None:intergenic 35.0%
TTTACAATGTTAATCAGGCG+AGG - chr8_1:50581922-50581941 Msa1198830:CDS 35.0%
ATCTAAGCACATCAGCAAAA+TGG - chr8_1:50581958-50581977 Msa1198830:CDS 35.0%
GAGAAGGTAGAAGAATTTGA+GGG - chr8_1:50582082-50582101 Msa1198830:CDS 35.0%
TGAAGAAGTAAATGCTGGAT+AGG + chr8_1:50582131-50582150 None:intergenic 35.0%
TCACTTGAAGAAGTAAATGC+TGG + chr8_1:50582136-50582155 None:intergenic 35.0%
! TCAAGTGAAGATGCTTTTGA+AGG - chr8_1:50582148-50582167 Msa1198830:CDS 35.0%
! TGTTTTCTGTACCATCTTGA+AGG + chr8_1:50582186-50582205 None:intergenic 35.0%
GAAAACAGCTATTCAAGTGA+TGG - chr8_1:50582199-50582218 Msa1198830:CDS 35.0%
!!! TATTTTGGAATGGGGATAGG+CGG + chr8_1:50576484-50576503 None:intergenic 40.0%
!! GGTGATGGGTTTGTAGTATT+TGG + chr8_1:50576578-50576597 None:intergenic 40.0%
GTAACTGAACTGAAACTCGA+AGG + chr8_1:50576683-50576702 None:intergenic 40.0%
GGTTCAAACGGTAAAAAAGC+CGG + chr8_1:50576745-50576764 None:intergenic 40.0%
TGATTCGTTTAATCCTCCTC+CGG - chr8_1:50576834-50576853 Msa1198830:CDS 40.0%
TTAACACCTTTCATCCCTTC+CGG + chr8_1:50576856-50576875 None:intergenic 40.0%
TTGGGAAGTTTCCTGAAGAA+GGG - chr8_1:50576905-50576924 Msa1198830:CDS 40.0%
! TCTCGGTGAGTTGGAATTTA+AGG - chr8_1:50577020-50577039 Msa1198830:intron 40.0%
! CTCGGTGAGTTGGAATTTAA+GGG - chr8_1:50577021-50577040 Msa1198830:intron 40.0%
! GTAATCACATGTGTCGGTAT+TGG - chr8_1:50577236-50577255 Msa1198830:intron 40.0%
CAATTGAGACTTCTGATCGA+AGG + chr8_1:50577270-50577289 None:intergenic 40.0%
TGTGTCAATGTCGTGTTTGA+TGG - chr8_1:50577358-50577377 Msa1198830:intron 40.0%
TGTTAGTGTGAGTGCTTCAT+AGG - chr8_1:50577382-50577401 Msa1198830:intron 40.0%
!! TTGCACTTGCACTAGTTCTA+AGG + chr8_1:50577505-50577524 None:intergenic 40.0%
TTGTGAATTGTGGAAGGTGA+AGG - chr8_1:50577566-50577585 Msa1198830:intron 40.0%
TAATGTTTGCCGCCATATTG+AGG - chr8_1:50577740-50577759 Msa1198830:CDS 40.0%
GAGTATAGGATTGTGCACAA+TGG - chr8_1:50577846-50577865 Msa1198830:CDS 40.0%
!!! TGTGCAGAAGCTGTTTTTAG+TGG - chr8_1:50577913-50577932 Msa1198830:intron 40.0%
TTCTGTACAGGATCATCAGA+AGG + chr8_1:50577942-50577961 None:intergenic 40.0%
GTCAATTGCCCATTTGTGAA+GGG + chr8_1:50578028-50578047 None:intergenic 40.0%
! CTTTGGTTGTTTGAGACTAC+AGG + chr8_1:50578129-50578148 None:intergenic 40.0%
! TTGGTGTCTAGTTCAAGCTT+TGG + chr8_1:50578146-50578165 None:intergenic 40.0%
AGGCATGTTGGTATTAAGGA+TGG + chr8_1:50578169-50578188 None:intergenic 40.0%
! CAACTACTATTTGATGGCAC+CGG - chr8_1:50578227-50578246 Msa1198830:intron 40.0%
AGTTGTGTAGTTCATCATGC+AGG - chr8_1:50578323-50578342 Msa1198830:intron 40.0%
! CGATGTGTATTCGGTAGTTT+TGG - chr8_1:50578465-50578484 Msa1198830:intron 40.0%
GGACAAAGTATATTCTCTGC+AGG - chr8_1:50578517-50578536 Msa1198830:intron 40.0%
! TCTGGAGTATACCTTCCAAA+TGG + chr8_1:50578613-50578632 None:intergenic 40.0%
TCCAGAAGAATGTACACCAT+AGG - chr8_1:50578627-50578646 Msa1198830:intron 40.0%
TCCTATGGTGTACATTCTTC+TGG + chr8_1:50578631-50578650 None:intergenic 40.0%
AGATCAGGAAGTAGTTATGG+CGG + chr8_1:50578674-50578693 None:intergenic 40.0%
AGGAGATCAGGAAGTAGTTA+TGG + chr8_1:50578677-50578696 None:intergenic 40.0%
TAGGATGTAAGTAGGAGATC+AGG + chr8_1:50578689-50578708 None:intergenic 40.0%
CTGTTATGAGGTAGTGACAT+AGG + chr8_1:50578776-50578795 None:intergenic 40.0%
! AAGGGTTTTTCCCTTCACAA+TGG + chr8_1:50579060-50579079 None:intergenic 40.0%
ATTGTGAAGGGAAAAACCCT+TGG - chr8_1:50579059-50579078 Msa1198830:intron 40.0%
GAATTAAAGGATGGGAGTTG+TGG + chr8_1:50579137-50579156 None:intergenic 40.0%
GGGAAAATAATTCATCGAGC+TGG - chr8_1:50579341-50579360 Msa1198830:intron 40.0%
! GGTGTAGTTTATCTTTTCCG+TGG - chr8_1:50579365-50579384 Msa1198830:intron 40.0%
GGTAGTTGTAATTTCTGCCA+CGG + chr8_1:50579385-50579404 None:intergenic 40.0%
CTTATACAAGATGCTCCAGA+AGG - chr8_1:50579464-50579483 Msa1198830:CDS 40.0%
TCAGCTTTCGTTAATCCTTC+TGG + chr8_1:50579482-50579501 None:intergenic 40.0%
GCAGATGAATTACGGATGAA+AGG - chr8_1:50579503-50579522 Msa1198830:CDS 40.0%
GCAATTAATAGCTGTCAGTC+TGG - chr8_1:50579729-50579748 Msa1198830:intron 40.0%
TCTTAAGGGGATTGTCAAGA+AGG - chr8_1:50579832-50579851 Msa1198830:intron 40.0%
TTTGCACTCAAATCTTCTGC+TGG + chr8_1:50579915-50579934 None:intergenic 40.0%
GAGTGCAAAATCTTAGTTGG+AGG - chr8_1:50579926-50579945 Msa1198830:intron 40.0%
! GATGTCAGAGATGCTTTTGA+AGG - chr8_1:50580171-50580190 Msa1198830:intron 40.0%
!! TGCTTTTGAAGGAAGCCATT+TGG - chr8_1:50580182-50580201 Msa1198830:intron 40.0%
TAAGATTGACTGCAAGGGAT+TGG - chr8_1:50580206-50580225 Msa1198830:intron 40.0%
GAAATTAGGTGCCAAGCTTA+AGG - chr8_1:50580245-50580264 Msa1198830:intron 40.0%
GTTGTCTAGTACCTTAAGCT+TGG + chr8_1:50580259-50580278 None:intergenic 40.0%
!! ACAACTAGCTTTCTTCGTCT+TGG - chr8_1:50580274-50580293 Msa1198830:intron 40.0%
GGAACCTACATTATGCTCAA+AGG - chr8_1:50580394-50580413 Msa1198830:intron 40.0%
AGCTAGCAAAGTTCACATGA+AGG - chr8_1:50580550-50580569 Msa1198830:intron 40.0%
GCTAGCAAAGTTCACATGAA+GGG - chr8_1:50580551-50580570 Msa1198830:intron 40.0%
! TCACATGAAGGGTATGATTG+AGG - chr8_1:50580562-50580581 Msa1198830:intron 40.0%
! ATTTCAAGGTACCCTTACCA+AGG - chr8_1:50580659-50580678 Msa1198830:intron 40.0%
!! TGTGTCACAGTTTTGTACAC+TGG - chr8_1:50580758-50580777 Msa1198830:intron 40.0%
!!! TCTATATTTTGGCTCTAGGG+AGG - chr8_1:50580826-50580845 Msa1198830:intron 40.0%
! CTTTTTGCTTTGGCAGGATT+TGG - chr8_1:50581052-50581071 Msa1198830:intron 40.0%
TCGAAAGACAATAGCACACA+AGG + chr8_1:50581080-50581099 None:intergenic 40.0%
!! GAGCAAGTATTGATTTGGAG+GGG - chr8_1:50581104-50581123 Msa1198830:intron 40.0%
TCCCACATCTAGGTAAGAAA+TGG - chr8_1:50581392-50581411 Msa1198830:intron 40.0%
GACCATTTCTTACCTAGATG+TGG + chr8_1:50581397-50581416 None:intergenic 40.0%
! GCATTTGTGCATTGAGGTTT+TGG - chr8_1:50581555-50581574 Msa1198830:intron 40.0%
!! CCTTTATAATGTGATGGTGG+GGG - chr8_1:50581667-50581686 Msa1198830:intron 40.0%
!! CTTTATAATGTGATGGTGGG+GGG - chr8_1:50581668-50581687 Msa1198830:intron 40.0%
GAATAGAAGTTTCCCAGACA+GGG - chr8_1:50581698-50581717 Msa1198830:intron 40.0%
TGATCATCTATGACATCGGA+GGG + chr8_1:50581796-50581815 None:intergenic 40.0%
ATGATCATCTATGACATCGG+AGG + chr8_1:50581797-50581816 None:intergenic 40.0%
GCCCAAAAATGTTATCTCTG+TGG - chr8_1:50581990-50582009 Msa1198830:CDS 40.0%
GGAGAAGGTAGAAGAATTTG+AGG - chr8_1:50582081-50582100 Msa1198830:CDS 40.0%
CACCTTGAAACACCTATCCA+TGG - chr8_1:50576357-50576376 Msa1198830:three_prime_UTR 45.0%
CACCATGGATAGGTGTTTCA+AGG + chr8_1:50576362-50576381 None:intergenic 45.0%
ATGCAACTAGCACCATGGAT+AGG + chr8_1:50576372-50576391 None:intergenic 45.0%
GGATAATGCAACTAGCACCA+TGG + chr8_1:50576377-50576396 None:intergenic 45.0%
!!! GGGTATTTTGGAATGGGGAT+AGG + chr8_1:50576487-50576506 None:intergenic 45.0%
! TGTAGTATTTGGAGTTGCGG+TGG + chr8_1:50576567-50576586 None:intergenic 45.0%
ACCAATTGCTATCCGTGAAC+CGG - chr8_1:50576723-50576742 Msa1198830:CDS 45.0%
! ACGGTAAAAAAGCCGGTTCA+CGG + chr8_1:50576738-50576757 None:intergenic 45.0%
TCTTCAGGAAACTTCCCAAC+CGG + chr8_1:50576904-50576923 None:intergenic 45.0%
GTTGGGAAGTTTCCTGAAGA+AGG - chr8_1:50576904-50576923 Msa1198830:CDS 45.0%
TGGGAAGTTTCCTGAAGAAG+GGG - chr8_1:50576906-50576925 Msa1198830:CDS 45.0%
GTGAGTAGAGAGGAGATACT+TGG - chr8_1:50576928-50576947 Msa1198830:CDS 45.0%
CCAACTCACCGAGATTAACT+TGG + chr8_1:50577014-50577033 None:intergenic 45.0%
CCAAGTTAATCTCGGTGAGT+TGG - chr8_1:50577011-50577030 Msa1198830:intron 45.0%
GCATCATAGGCAGCTACATT+AGG + chr8_1:50577087-50577106 None:intergenic 45.0%
CAGAAATGTCGGTGCATCAT+AGG + chr8_1:50577100-50577119 None:intergenic 45.0%
! GCACCGACATTTCTGATTGA+AGG - chr8_1:50577105-50577124 Msa1198830:intron 45.0%
GTTTGTGTCTGTGTCTGTGT+TGG + chr8_1:50577149-50577168 None:intergenic 45.0%
CAAGTGCAAGATTGCCATTC+TGG - chr8_1:50577516-50577535 Msa1198830:intron 45.0%
AGGCGTTCCTACTGTTGATA+TGG - chr8_1:50577716-50577735 Msa1198830:intron 45.0%
CATGAAGTTCCATCTTCGCA+AGG - chr8_1:50577981-50578000 Msa1198830:intron 45.0%
AGTTCCATCTTCGCAAGGTT+TGG - chr8_1:50577986-50578005 Msa1198830:intron 45.0%
ATTGCCCATTTGTGAAGGGT+TGG + chr8_1:50578024-50578043 None:intergenic 45.0%
GGTCAATTGCCCATTTGTGA+AGG + chr8_1:50578029-50578048 None:intergenic 45.0%
AGCAGAGATCGAGAATGAGA+GGG + chr8_1:50578076-50578095 None:intergenic 45.0%
AAGCAGAGATCGAGAATGAG+AGG + chr8_1:50578077-50578096 None:intergenic 45.0%
TGCAGGAGTTCATCAACTCT+GGG - chr8_1:50578534-50578553 Msa1198830:intron 45.0%
GATCAGGAAGTAGTTATGGC+GGG + chr8_1:50578673-50578692 None:intergenic 45.0%
TCAAAGGGAACAGGAATGGT+TGG - chr8_1:50578817-50578836 Msa1198830:intron 45.0%
CAAAGGGAACAGGAATGGTT+GGG - chr8_1:50578818-50578837 Msa1198830:intron 45.0%
TTTGGATAAACAGGAGCAGC+TGG + chr8_1:50579443-50579462 None:intergenic 45.0%
TTTCCAGACAACACACTGCA+TGG - chr8_1:50579591-50579610 Msa1198830:intron 45.0%
AATCCATGCAGTGTGTTGTC+TGG + chr8_1:50579597-50579616 None:intergenic 45.0%
GTAATTGCAGTCACAAGGTG+CGG - chr8_1:50579638-50579657 Msa1198830:intron 45.0%
!! TGTGGTGTTGCAGCCAAAAA+TGG - chr8_1:50580126-50580145 Msa1198830:intron 45.0%
CACTGGCGCAATAATTAGTC+TGG - chr8_1:50580775-50580794 Msa1198830:intron 45.0%
!!! ATATTTTGGCTCTAGGGAGG+AGG - chr8_1:50580829-50580848 Msa1198830:intron 45.0%
!!! TATTTTGGCTCTAGGGAGGA+GGG - chr8_1:50580830-50580849 Msa1198830:intron 45.0%
! TGATTTGGAGGGGCAAAGAT+TGG - chr8_1:50581114-50581133 Msa1198830:intron 45.0%
GAGGAAAAACTGGAGCTTGA+GGG + chr8_1:50581151-50581170 None:intergenic 45.0%
CCCCCACCATCACATTATAA+AGG + chr8_1:50581670-50581689 None:intergenic 45.0%
GGAATAGAAGTTTCCCAGAC+AGG - chr8_1:50581697-50581716 Msa1198830:intron 45.0%
! TCGACATGGATTTTCCTCTC+TGG - chr8_1:50581754-50581773 Msa1198830:intron 45.0%
! CGACATGGATTTTCCTCTCT+GGG - chr8_1:50581755-50581774 Msa1198830:intron 45.0%
!! TGGATTTTCCTCTCTGGGAA+TGG - chr8_1:50581760-50581779 Msa1198830:intron 45.0%
ACAATGTTAATCAGGCGAGG+TGG - chr8_1:50581925-50581944 Msa1198830:CDS 45.0%
TATTGGTCCTGATGCTCTCT+TGG - chr8_1:50582060-50582079 Msa1198830:CDS 45.0%
! AAATCAACTGGTAGCGATCC+AGG + chr8_1:50582334-50582353 None:intergenic 45.0%
!!! TTTTAAATATTTTTTTTGTA+TGG - chr8_1:50581487-50581506 Msa1198830:intron 5.0%
GAGGAAGATGAGGGGTTGTT+GGG + chr8_1:50576445-50576464 None:intergenic 50.0%
TGAGGAAGATGAGGGGTTGT+TGG + chr8_1:50576446-50576465 None:intergenic 50.0%
!!! GTGGGGGGTATTTTGGAATG+GGG + chr8_1:50576492-50576511 None:intergenic 50.0%
!!! GGTGGGGGGTATTTTGGAAT+GGG + chr8_1:50576493-50576512 None:intergenic 50.0%
!!! AGGTGGGGGGTATTTTGGAA+TGG + chr8_1:50576494-50576513 None:intergenic 50.0%
GGCATTGTGGGAGGTTCAAA+CGG + chr8_1:50576757-50576776 None:intergenic 50.0%
TCGTTTAATCCTCCTCCGGA+AGG - chr8_1:50576838-50576857 Msa1198830:CDS 50.0%
CGTTTAATCCTCCTCCGGAA+GGG - chr8_1:50576839-50576858 Msa1198830:CDS 50.0%
GGAAACTTCCCAACCGGAAA+CGG + chr8_1:50576898-50576917 None:intergenic 50.0%
TCTCTACTCACCCCTTCTTC+AGG + chr8_1:50576919-50576938 None:intergenic 50.0%
TGAAGAAGGGGTGAGTAGAG+AGG - chr8_1:50576918-50576937 Msa1198830:CDS 50.0%
TTGGTGAGCCGCTTAAGAAG+TGG - chr8_1:50576947-50576966 Msa1198830:CDS 50.0%
TGGTGAGCCGCTTAAGAAGT+GGG - chr8_1:50576948-50576967 Msa1198830:CDS 50.0%
TGCACCTCCCACTTCTTAAG+CGG + chr8_1:50576958-50576977 None:intergenic 50.0%
TGGCGATTATCGGCCATCAT+AGG + chr8_1:50576994-50577013 None:intergenic 50.0%
! TAGTCCTGGTGTCAACGTGT+TGG + chr8_1:50577191-50577210 None:intergenic 50.0%
GTCACCAAACCTTGCGAAGA+TGG + chr8_1:50577993-50578012 None:intergenic 50.0%
CAGAGATCGAGAATGAGAGG+GGG + chr8_1:50578074-50578093 None:intergenic 50.0%
GCAGAGATCGAGAATGAGAG+GGG + chr8_1:50578075-50578094 None:intergenic 50.0%
GACATAAGTAGGGGGCTAAG+AGG - chr8_1:50578436-50578455 Msa1198830:intron 50.0%
CTGCAGGAGTTCATCAACTC+TGG - chr8_1:50578533-50578552 Msa1198830:intron 50.0%
AATCCCCAAATCCCACCTTG+AGG - chr8_1:50578872-50578891 Msa1198830:intron 50.0%
ATCCCCAAATCCCACCTTGA+GGG - chr8_1:50578873-50578892 Msa1198830:intron 50.0%
TTGCCCTCAAGGTGGGATTT+GGG + chr8_1:50578879-50578898 None:intergenic 50.0%
TAGCGGAAATCAGATTGGGG+AGG - chr8_1:50578991-50579010 Msa1198830:intron 50.0%
AGCGGAAATCAGATTGGGGA+GGG - chr8_1:50578992-50579011 Msa1198830:intron 50.0%
GGGGAATAGAATCACGCCAA+GGG + chr8_1:50579078-50579097 None:intergenic 50.0%
TGGGGAATAGAATCACGCCA+AGG + chr8_1:50579079-50579098 None:intergenic 50.0%
CCTGCTTTCTCCTGTCATGA+CGG + chr8_1:50579320-50579339 None:intergenic 50.0%
CGTCATGACAGGAGAAAGCA+GGG - chr8_1:50579318-50579337 Msa1198830:intron 50.0%
GTCATGACAGGAGAAAGCAG+GGG - chr8_1:50579319-50579338 Msa1198830:intron 50.0%
TCATGACAGGAGAAAGCAGG+GGG - chr8_1:50579320-50579339 Msa1198830:intron 50.0%
CTGGATACTGTGGACGAGTA+CGG + chr8_1:50579406-50579425 None:intergenic 50.0%
! CAGAGCATCACTGGATACTG+TGG + chr8_1:50579416-50579435 None:intergenic 50.0%
CACAGTATCCAGTGATGCTC+TGG - chr8_1:50579414-50579433 Msa1198830:CDS 50.0%
GGAGGAAAAACTGGAGCTTG+AGG + chr8_1:50581152-50581171 None:intergenic 50.0%
! TCCAGTTTTTCCTCCTGCTG+AGG - chr8_1:50581157-50581176 Msa1198830:intron 50.0%
CTTGTAATGGTAGCCTCAGC+AGG + chr8_1:50581173-50581192 None:intergenic 50.0%
TTCACTGGAACTCCCTGTCT+GGG + chr8_1:50581713-50581732 None:intergenic 50.0%
ATTCACTGGAACTCCCTGTC+TGG + chr8_1:50581714-50581733 None:intergenic 50.0%
TCCTGATGCTCTCTTGGAGA+AGG - chr8_1:50582066-50582085 Msa1198830:CDS 50.0%
!! ACCTTCTCCAAGAGAGCATC+AGG + chr8_1:50582070-50582089 None:intergenic 50.0%
GTGGATACATCAGCTGAACC+TGG - chr8_1:50582313-50582332 Msa1198830:CDS 50.0%
TGGGTGGTAAGGAGGAGAAG+AGG + chr8_1:50576426-50576445 None:intergenic 55.0%
TGAGGGGTTGTTGGGTGGTA+AGG + chr8_1:50576437-50576456 None:intergenic 55.0%
GAAGATGAGGGGTTGTTGGG+TGG + chr8_1:50576442-50576461 None:intergenic 55.0%
! TGGCGGATGAGGAAGATGAG+GGG + chr8_1:50576453-50576472 None:intergenic 55.0%
!! GTGGCGGATGAGGAAGATGA+GGG + chr8_1:50576454-50576473 None:intergenic 55.0%
!!! TTGCGAGGTGGGGGGTATTT+TGG + chr8_1:50576499-50576518 None:intergenic 55.0%
!! TTTGGGTTTGGTGGTGGTGG+GGG + chr8_1:50576529-50576548 None:intergenic 55.0%
!! GTTTGGGTTTGGTGGTGGTG+GGG + chr8_1:50576530-50576549 None:intergenic 55.0%
!! GGTTTGGGTTTGGTGGTGGT+GGG + chr8_1:50576531-50576550 None:intergenic 55.0%
GGAGTTGCGGTGGTGTTTGA+GGG + chr8_1:50576557-50576576 None:intergenic 55.0%
TGGAGTTGCGGTGGTGTTTG+AGG + chr8_1:50576558-50576577 None:intergenic 55.0%
!! ATGGTAGTGGGGTGGGTGAT+GGG + chr8_1:50576592-50576611 None:intergenic 55.0%
TCGGAGGAAGGGATGGTAGT+GGG + chr8_1:50576604-50576623 None:intergenic 55.0%
!! GATGATGACGGAGCGGTTGT+CGG + chr8_1:50576623-50576642 None:intergenic 55.0%
GACAACCGCTCCGTCATCAT+CGG - chr8_1:50576622-50576641 Msa1198830:CDS 55.0%
!! ATTCGCCGATGATGACGGAG+CGG + chr8_1:50576630-50576649 None:intergenic 55.0%
TCCGTCATCATCGGCGAATC+CGG - chr8_1:50576631-50576650 Msa1198830:CDS 55.0%
GAAACTCGAAGGGAGCTCCA+GGG + chr8_1:50576672-50576691 None:intergenic 55.0%
TGAAACTCGAAGGGAGCTCC+AGG + chr8_1:50576673-50576692 None:intergenic 55.0%
! GCCGGTTCACGGATAGCAAT+TGG + chr8_1:50576727-50576746 None:intergenic 55.0%
TTGAACCTCCCACAATGCCG+AGG - chr8_1:50576758-50576777 Msa1198830:CDS 55.0%
AACGGTGCTTTCCCTGTCCA+CGG + chr8_1:50576784-50576803 None:intergenic 55.0%
ACACCTTTCATCCCTTCCGG+AGG + chr8_1:50576853-50576872 None:intergenic 55.0%
TGAGCCGCTTAAGAAGTGGG+AGG - chr8_1:50576951-50576970 Msa1198830:CDS 55.0%
! CAACGTGTTGGCGTCAAGTC+TGG + chr8_1:50577179-50577198 None:intergenic 55.0%
TGCCCTCAAGGTGGGATTTG+GGG + chr8_1:50578878-50578897 None:intergenic 55.0%
CTTGCCCTCAAGGTGGGATT+TGG + chr8_1:50578880-50578899 None:intergenic 55.0%
CAAATCCCACCTTGAGGGCA+AGG - chr8_1:50578878-50578897 Msa1198830:intron 55.0%
CCGTCATGACAGGAGAAAGC+AGG - chr8_1:50579317-50579336 Msa1198830:intron 55.0%
CATGACAGGAGAAAGCAGGG+GGG - chr8_1:50579321-50579340 Msa1198830:intron 55.0%
GCCTCAGCAGGAGGAAAAAC+TGG + chr8_1:50581161-50581180 None:intergenic 55.0%
GTAATGGTAGCCTCAGCAGG+AGG + chr8_1:50581170-50581189 None:intergenic 55.0%
!! TGTGATGGTGGGGGGAATTG+AGG - chr8_1:50581676-50581695 Msa1198830:intron 55.0%
!! TGCTGGATAGGAGTGCTCTG+TGG + chr8_1:50582119-50582138 None:intergenic 55.0%
TTATCCTCTCCCCTCCCAGC+TGG - chr8_1:50576391-50576410 Msa1198830:three_prime_UTR 60.0%
AGAGGTTCCCCCTACCAGCT+GGG + chr8_1:50576408-50576427 None:intergenic 60.0%
AAGAGGTTCCCCCTACCAGC+TGG + chr8_1:50576409-50576428 None:intergenic 60.0%
GGGGTTGTTGGGTGGTAAGG+AGG + chr8_1:50576434-50576453 None:intergenic 60.0%
!! GGTGGCGGATGAGGAAGATG+AGG + chr8_1:50576455-50576474 None:intergenic 60.0%
AATGGGGATAGGCGGACGTG+GGG + chr8_1:50576476-50576495 None:intergenic 60.0%
GAATGGGGATAGGCGGACGT+GGG + chr8_1:50576477-50576496 None:intergenic 60.0%
! GGTGTGATTTGCGAGGTGGG+GGG + chr8_1:50576507-50576526 None:intergenic 60.0%
! GGGTGTGATTTGCGAGGTGG+GGG + chr8_1:50576508-50576527 None:intergenic 60.0%
! GGGGTGTGATTTGCGAGGTG+GGG + chr8_1:50576509-50576528 None:intergenic 60.0%
! GGGGGTGTGATTTGCGAGGT+GGG + chr8_1:50576510-50576529 None:intergenic 60.0%
!! TTGGGTTTGGTGGTGGTGGG+GGG + chr8_1:50576528-50576547 None:intergenic 60.0%
!! GGGTTTGGGTTTGGTGGTGG+TGG + chr8_1:50576532-50576551 None:intergenic 60.0%
! TTGAGGGCGGGGTTTGGGTT+TGG + chr8_1:50576541-50576560 None:intergenic 60.0%
GGTGTTTGAGGGCGGGGTTT+GGG + chr8_1:50576546-50576565 None:intergenic 60.0%
TGGTGTTTGAGGGCGGGGTT+TGG + chr8_1:50576547-50576566 None:intergenic 60.0%
TTGCGGTGGTGTTTGAGGGC+GGG + chr8_1:50576553-50576572 None:intergenic 60.0%
GTTGCGGTGGTGTTTGAGGG+CGG + chr8_1:50576554-50576573 None:intergenic 60.0%
!! GATGGTAGTGGGGTGGGTGA+TGG + chr8_1:50576593-50576612 None:intergenic 60.0%
!! GGAAGGGATGGTAGTGGGGT+GGG + chr8_1:50576599-50576618 None:intergenic 60.0%
!! AGGAAGGGATGGTAGTGGGG+TGG + chr8_1:50576600-50576619 None:intergenic 60.0%
! CGGAGGAAGGGATGGTAGTG+GGG + chr8_1:50576603-50576622 None:intergenic 60.0%
GTCGGAGGAAGGGATGGTAG+TGG + chr8_1:50576605-50576624 None:intergenic 60.0%
GCCGGATTCGCCGATGATGA+CGG + chr8_1:50576635-50576654 None:intergenic 60.0%
AGGGAGAAGGTAGGAGACGC+CGG + chr8_1:50576653-50576672 None:intergenic 60.0%
CCTTTCATCCCTTCCGGAGG+AGG + chr8_1:50576850-50576869 None:intergenic 60.0%
CCTCCTCCGGAAGGGATGAA+AGG - chr8_1:50576847-50576866 Msa1198830:CDS 60.0%
TGAAATGCCGGGGCCGTTTC+CGG - chr8_1:50576882-50576901 Msa1198830:CDS 60.0%
GACGCCAACACGTTGACACC+AGG - chr8_1:50577184-50577203 Msa1198830:intron 60.0%
GACTCGGCGACGCTTCCAAT+GGG + chr8_1:50577679-50577698 None:intergenic 60.0%
AGACTCGGCGACGCTTCCAA+TGG + chr8_1:50577680-50577699 None:intergenic 60.0%
ATCCCACCTTGAGGGCAAGG+TGG - chr8_1:50578881-50578900 Msa1198830:intron 60.0%
CTCCACCTTGCCCTCAAGGT+GGG + chr8_1:50578886-50578905 None:intergenic 60.0%
GAAGCTCCACCTTGCCCTCA+AGG + chr8_1:50578890-50578909 None:intergenic 60.0%
! GCTGGCTTCCAGAGCATCAC+TGG + chr8_1:50579425-50579444 None:intergenic 60.0%
CTCTCCCCTCCCAGCTGGTA+GGG - chr8_1:50576396-50576415 Msa1198830:three_prime_UTR 65.0%
TCTCCCCTCCCAGCTGGTAG+GGG - chr8_1:50576397-50576416 Msa1198830:three_prime_UTR 65.0%
TTCCCCCTACCAGCTGGGAG+GGG + chr8_1:50576403-50576422 None:intergenic 65.0%
GTTCCCCCTACCAGCTGGGA+GGG + chr8_1:50576404-50576423 None:intergenic 65.0%
GGAATGGGGATAGGCGGACG+TGG + chr8_1:50576478-50576497 None:intergenic 65.0%
! GGGGGGTGTGATTTGCGAGG+TGG + chr8_1:50576511-50576530 None:intergenic 65.0%
! GGTGGGGGGTGTGATTTGCG+AGG + chr8_1:50576514-50576533 None:intergenic 65.0%
!! GCGGGGTTTGGGTTTGGTGG+TGG + chr8_1:50576535-50576554 None:intergenic 65.0%
! AGGGCGGGGTTTGGGTTTGG+TGG + chr8_1:50576538-50576557 None:intergenic 65.0%
TGCGGTGGTGTTTGAGGGCG+GGG + chr8_1:50576552-50576571 None:intergenic 65.0%
GCGGTTGTCGGAGGAAGGGA+TGG + chr8_1:50576611-50576630 None:intergenic 65.0%
CGGAGCGGTTGTCGGAGGAA+GGG + chr8_1:50576615-50576634 None:intergenic 65.0%
ACGGAGCGGTTGTCGGAGGA+AGG + chr8_1:50576616-50576635 None:intergenic 65.0%
!! GATGACGGAGCGGTTGTCGG+AGG + chr8_1:50576620-50576639 None:intergenic 65.0%
GGCGTCTCCTACCTTCTCCC+TGG - chr8_1:50576652-50576671 Msa1198830:CDS 65.0%
GGGAGCTCCAGGGAGAAGGT+AGG + chr8_1:50576662-50576681 None:intergenic 65.0%
CGAAGGGAGCTCCAGGGAGA+AGG + chr8_1:50576666-50576685 None:intergenic 65.0%
GTCCACGGCCTCGGCATTGT+GGG + chr8_1:50576769-50576788 None:intergenic 65.0%
TGTCCACGGCCTCGGCATTG+TGG + chr8_1:50576770-50576789 None:intergenic 65.0%
ACAATGCCGAGGCCGTGGAC+AGG - chr8_1:50576769-50576788 Msa1198830:CDS 65.0%
CAATGCCGAGGCCGTGGACA+GGG - chr8_1:50576770-50576789 Msa1198830:CDS 65.0%
GCTTTCCCTGTCCACGGCCT+CGG + chr8_1:50576778-50576797 None:intergenic 65.0%
TTCCCAACCGGAAACGGCCC+CGG + chr8_1:50576892-50576911 None:intergenic 65.0%
GCTCCACCTTGCCCTCAAGG+TGG + chr8_1:50578887-50578906 None:intergenic 65.0%
CCTACCAGCTGGGAGGGGAG+AGG + chr8_1:50576398-50576417 None:intergenic 70.0%
CCTCTCCCCTCCCAGCTGGT+AGG - chr8_1:50576395-50576414 Msa1198830:three_prime_UTR 70.0%
CTCCCCTCCCAGCTGGTAGG+GGG - chr8_1:50576398-50576417 Msa1198830:three_prime_UTR 70.0%
GGTTCCCCCTACCAGCTGGG+AGG + chr8_1:50576405-50576424 None:intergenic 70.0%
GATAGGCGGACGTGGGGTGG+CGG + chr8_1:50576470-50576489 None:intergenic 70.0%
CACGGCCTCGGCATTGTGGG+AGG + chr8_1:50576766-50576785 None:intergenic 70.0%
CTCCCACAATGCCGAGGCCG+TGG - chr8_1:50576764-50576783 Msa1198830:CDS 70.0%
ATGCCGGGGCCGTTTCCGGT+TGG - chr8_1:50576886-50576905 Msa1198830:CDS 70.0%
TGCCGGGGCCGTTTCCGGTT+GGG - chr8_1:50576887-50576906 Msa1198830:CDS 70.0%
!! CGGACGTGGGGTGGCGGATG+AGG + chr8_1:50576464-50576483 None:intergenic 75.0%
GGGGATAGGCGGACGTGGGG+TGG + chr8_1:50576473-50576492 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 50576353 50582581 50576353 ID=Msa1198830;Name=Msa1198830
chr8_1 mRNA 50576353 50582581 50576353 ID=Msa1198830-mRNA-1;Parent=Msa1198830;Name=Msa1198830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=23|0.6|0.83|0.83|1|1|6|191|550
chr8_1 exon 50576353 50576995 50576353 ID=Msa1198830-mRNA-1:exon:15878;Parent=Msa1198830-mRNA-1
chr8_1 exon 50577725 50577866 50577725 ID=Msa1198830-mRNA-1:exon:15877;Parent=Msa1198830-mRNA-1
chr8_1 exon 50577942 50577997 50577942 ID=Msa1198830-mRNA-1:exon:15876;Parent=Msa1198830-mRNA-1
chr8_1 exon 50579380 50579605 50579380 ID=Msa1198830-mRNA-1:exon:15875;Parent=Msa1198830-mRNA-1
chr8_1 exon 50581173 50581300 50581173 ID=Msa1198830-mRNA-1:exon:15874;Parent=Msa1198830-mRNA-1
chr8_1 exon 50581910 50582581 50581910 ID=Msa1198830-mRNA-1:exon:15873;Parent=Msa1198830-mRNA-1
chr8_1 five_prime_UTR 50582559 50582581 50582559 ID=Msa1198830-mRNA-1:five_prime_utr;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50581910 50582558 50581910 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50581173 50581300 50581173 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50579380 50579605 50579380 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50577942 50577997 50577942 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50577725 50577866 50577725 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 CDS 50576544 50576995 50576544 ID=Msa1198830-mRNA-1:cds;Parent=Msa1198830-mRNA-1
chr8_1 three_prime_UTR 50576353 50576543 50576353 ID=Msa1198830-mRNA-1:three_prime_utr;Parent=Msa1198830-mRNA-1
Gene Sequence

>Msa1198830

ATGGTGCTAGTTGCATTATCCTCTCCCCTCCCAGCTGGTAGGGGGAACCTCTTCTCCTCCTTACCACCCAACAACCCCTCATCTTCCTCATCCGCCACCCCACGTCCGCCTATCCCCATTCCAAAATACCCCCCACCTCGCAAATCACACCCCCCACCACCACCAAACCCAAACCCCGCCCTCAAACACCACCGCAACTCCAAATACTACAAACCCATCACCCACCCCACTACCATCCCTTCCTCCGACAACCGCTCCGTCATCATCGGCGAATCCGGCGTCTCCTACCTTCTCCCTGGAGCTCCCTTCGAGTTTCAGTTCAGTTACTCCGAAACTCCAAAAGTGAAACCAATTGCTATCCGTGAACCGGCTTTTTTACCGTTTGAACCTCCCACAATGCCGAGGCCGTGGACAGGGAAAGCACCGTTGAAGAAGTCGAAGAAGAATATTCCGCTGTTTGATTCGTTTAATCCTCCTCCGGAAGGGATGAAAGGTGTTAAGAAAGTTGAAATGCCGGGGCCGTTTCCGGTTGGGAAGTTTCCTGAAGAAGGGGTGAGTAGAGAGGAGATACTTGGTGAGCCGCTTAAGAAGTGGGAGGTGCAAATGCTTGTTAAGCCTATGATGGCCGATAATCGCCAAGTTAATCTCGGAAGGGATGGATTAACGCATAACATGTTGGAGTTAATACATTCCCATTGGAAGCGTCGCCGAGTCTGTAAAATTCGTTGTAAAGGCGTTCCTACTGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATTCATCGAGCTGGCGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACGAAAGCTGAAGCAGATGAATTACGGATGAAAGGGAAAAGTCTGTTGCCAATATATAAATTAGAACATAATAATAAGAAAACAGGTCATGTGCAGTGTACAATAGCATGCATCATCTTTGATTTGGTTCCTTGTGTGCTATTGTCTTTCGATGATGAGCAAGTATTGATTTGGAGGGGCAAAGATTGGAAATCAATGTACCCTCAAGCTCCAGTTTTTCCTCCTGCTGAGGCTACCATTACAAGTGATTTAGAAAACAAAGGCGAGGTGGCTGATAATCAATCTAAGCACATCAGCAAAATGGTCAGCACAAGCCCAAAAATGTTATCTCTGTGGAAGAGTGCAATTGACTCAAACAAAGCCTTATTGCTAGAAGAATTTAATATTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACATGCCACAGAGCACTCCTATCCAGCATTTACTTCTTCAAGTGAAGATGCTTTTGAAGGTTCAAATGTATACCTTCAAGATGGTACAGAAAACAGCTATTCAAGTGATGGCGTAGATGATGTCGATGATTATGATAATAGCAGTGACGACGAAGATGATTATGATTACTGCAATGACGAAGACGATGAGTTTAATGATATAGTGGATACATCAGCTGAACCTGGATCGCTACCAGTTGATTTGCTTGTTGATAAGCTCAAACTAAGACAAAAGGAGTAA
Protein sequence

>Msa1198830

MVLVALSSPLPAGRGNLFSSLPPNNPSSSSSATPRPPIPIPKYPPPRKSHPPPPPNPNPALKHHRNSKYYKPITHPTTIPSSDNRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGVSREEILGEPLKKWEVQMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKSLLPIYKLEHNNKKTGHVQCTIACIIFDLVPCVLLSFDDEQVLIWRGKDWKSMYPQAPVFPPAEATITSDLENKGEVADNQSKHISKMVSTSPKMLSLWKSAIDSNKALLLEEFNIGPDALLEKVEEFEGISHATEHSYPAFTSSSEDAFEGSNVYLQDGTENSYSSDGVDDVDDYDNSSDDEDDYDYCNDEDDEFNDIVDTSAEPGSLPVDLLVDKLKLRQKE*