Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135760 | XP_013469936.1 | 95.238 | 252 | 12 | 0 | 1 | 252 | 1 | 252 | 1.95e-179 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135760 | sp|Q8S9L6|CRK29_ARATH | 38.073 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 3.07e-37 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135760 | G8A0Z3 | 95.238 | 252 | 12 | 0 | 1 | 252 | 1 | 252 | 9.30e-180 | 503 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041280 | Msa0135760 | 0.865922 | 4.155352e-65 | -8.615850e-47 |
| Msa0047660 | Msa0135760 | -0.808478 | 3.036359e-50 | -8.615850e-47 |
| Msa0075080 | Msa0135760 | -0.801435 | 9.014904e-49 | -8.615850e-47 |
| Msa0088790 | Msa0135760 | 0.850559 | 1.570423e-60 | -8.615850e-47 |
| Msa0088800 | Msa0135760 | 0.884544 | 1.751567e-71 | -8.615850e-47 |
| Msa0090870 | Msa0135760 | 0.813459 | 2.532228e-51 | -8.615850e-47 |
| Msa0108490 | Msa0135760 | -0.810532 | 1.099905e-50 | -8.615850e-47 |
| Msa0117650 | Msa0135760 | 0.815684 | 8.147745e-52 | -8.615850e-47 |
| Msa0129770 | Msa0135760 | 0.803314 | 3.698945e-49 | -8.615850e-47 |
| Msa0135760 | Msa0135770 | 0.838720 | 2.431978e-57 | -8.615850e-47 |
| Msa0135760 | Msa0167570 | -0.825223 | 5.269168e-54 | -8.615850e-47 |
| Msa0135760 | Msa0172380 | 0.838501 | 2.769878e-57 | -8.615850e-47 |
| Msa0135760 | Msa0180380 | 0.937248 | 4.718692e-98 | -8.615850e-47 |
| Msa0135760 | Msa0183390 | 0.817841 | 2.675135e-52 | -8.615850e-47 |
| Msa0135760 | Msa0342980 | 0.807361 | 5.247724e-50 | -8.615850e-47 |
| Msa0135760 | Msa0444770 | -0.805201 | 1.496797e-49 | -8.615850e-47 |
| Msa0135760 | Msa0471070 | 0.820937 | 5.268015e-53 | -8.615850e-47 |
| Msa0135760 | Msa0492330 | -0.817454 | 3.269844e-52 | -8.615850e-47 |
| Msa0135760 | Msa0561450 | -0.804312 | 2.294677e-49 | -8.615850e-47 |
| Msa0135760 | Msa0606830 | 0.811622 | 6.384993e-51 | -8.615850e-47 |
| Msa0135760 | Msa0619030 | -0.800579 | 1.349091e-48 | -8.615850e-47 |
| Msa0135760 | Msa0622850 | 0.805566 | 1.254720e-49 | -8.615850e-47 |
| Msa0135760 | Msa0637590 | 0.837463 | 5.121517e-57 | -8.615850e-47 |
| Msa0135760 | Msa0654850 | -0.812313 | 4.514168e-51 | -8.615850e-47 |
| Msa0135760 | Msa0719600 | 0.801003 | 1.105282e-48 | -8.615850e-47 |
| Msa0135760 | Msa0739820 | -0.805196 | 1.499823e-49 | -8.615850e-47 |
| Msa0135760 | Msa0753590 | -0.821681 | 3.547123e-53 | -8.615850e-47 |
| Msa0135760 | Msa0784780 | -0.816597 | 5.093777e-52 | -8.615850e-47 |
| Msa0135760 | Msa0792490 | -0.814712 | 1.339591e-51 | -8.615850e-47 |
| Msa0135760 | Msa0800150 | 0.818689 | 1.719324e-52 | -8.615850e-47 |
| Msa0135760 | Msa0800180 | 0.817100 | 3.929064e-52 | -8.615850e-47 |
| Msa0135760 | Msa0853200 | -0.814137 | 1.795255e-51 | -8.615850e-47 |
| Msa0135760 | Msa0858250 | -0.818134 | 2.296866e-52 | -8.615850e-47 |
| Msa0135760 | Msa0882480 | -0.827571 | 1.453548e-54 | -8.615850e-47 |
| Msa0135760 | Msa0925940 | 0.836816 | 7.496181e-57 | -8.615850e-47 |
| Msa0135760 | Msa0948590 | 0.807161 | 5.786228e-50 | -8.615850e-47 |
| Msa0135760 | Msa0966590 | 0.827783 | 1.293010e-54 | -8.615850e-47 |
| Msa0135760 | Msa0984730 | 0.803008 | 4.279318e-49 | -8.615850e-47 |
| Msa0135760 | Msa1019420 | 0.800974 | 1.120590e-48 | -8.615850e-47 |
| Msa0135760 | Msa1058550 | -0.802989 | 4.318410e-49 | -8.615850e-47 |
| Msa0135760 | Msa1092310 | 0.815051 | 1.126729e-51 | -8.615850e-47 |
| Msa0135760 | Msa1126320 | -0.805846 | 1.096226e-49 | -8.615850e-47 |
| Msa0135760 | Msa1130150 | -0.801597 | 8.353712e-49 | -8.615850e-47 |
| Msa0135760 | Msa1215540 | -0.805667 | 1.195348e-49 | -8.615850e-47 |
| Msa0135760 | Msa1268360 | 0.800799 | 1.216267e-48 | -8.615850e-47 |
| Msa0135760 | Msa1268390 | 0.827812 | 1.272141e-54 | -8.615850e-47 |
| Msa0135760 | Msa1268420 | 0.813751 | 2.184630e-51 | -8.615850e-47 |
| Msa0135760 | Msa1373930 | -0.814250 | 1.695038e-51 | -8.615850e-47 |
| Msa0135760 | Msa1404810 | -0.804840 | 1.780582e-49 | -8.615850e-47 |
| Msa0135760 | Msa1457480 | 0.819844 | 9.381632e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135760 | MtrunA17_Chr1g0206651 | 95.238 | 252 | 12 | 0 | 1 | 252 | 1 | 252 | 0.0 | 503 |
| Msa0135760 | MtrunA17_Chr1g0206601 | 72.266 | 256 | 65 | 4 | 1 | 251 | 22 | 276 | 9.57e-135 | 381 |
| Msa0135760 | MtrunA17_Chr1g0206581 | 67.925 | 265 | 69 | 6 | 1 | 251 | 18 | 280 | 7.48e-126 | 358 |
| Msa0135760 | MtrunA17_Chr1g0154341 | 55.645 | 248 | 103 | 4 | 10 | 251 | 7 | 253 | 8.46e-93 | 275 |
| Msa0135760 | MtrunA17_Chr1g0154361 | 55.918 | 245 | 101 | 3 | 12 | 250 | 8 | 251 | 5.29e-92 | 273 |
| Msa0135760 | MtrunA17_Chr1g0154321 | 54.582 | 251 | 102 | 6 | 12 | 251 | 8 | 257 | 1.19e-85 | 270 |
| Msa0135760 | MtrunA17_Chr1g0206571 | 54.978 | 231 | 102 | 2 | 23 | 252 | 30 | 259 | 1.04e-84 | 255 |
| Msa0135760 | MtrunA17_Chr1g0154351 | 53.441 | 247 | 107 | 4 | 12 | 251 | 8 | 253 | 1.13e-82 | 260 |
| Msa0135760 | MtrunA17_Chr1g0154311 | 54.065 | 246 | 104 | 5 | 13 | 251 | 10 | 253 | 7.82e-81 | 255 |
| Msa0135760 | MtrunA17_Chr1g0206531 | 50.391 | 256 | 115 | 6 | 1 | 250 | 1 | 250 | 8.58e-78 | 247 |
| Msa0135760 | MtrunA17_Chr5g0428591 | 49.180 | 244 | 116 | 4 | 10 | 251 | 8 | 245 | 5.97e-75 | 229 |
| Msa0135760 | MtrunA17_Chr1g0154371 | 51.172 | 256 | 113 | 5 | 1 | 246 | 8 | 261 | 2.78e-74 | 238 |
| Msa0135760 | MtrunA17_Chr1g0206461 | 47.244 | 254 | 123 | 4 | 1 | 250 | 1 | 247 | 3.55e-71 | 229 |
| Msa0135760 | MtrunA17_Chr1g0206451 | 50.204 | 245 | 115 | 4 | 7 | 249 | 45 | 284 | 1.42e-66 | 218 |
| Msa0135760 | MtrunA17_Chr5g0428571 | 48.684 | 228 | 111 | 3 | 24 | 251 | 25 | 246 | 3.45e-66 | 214 |
| Msa0135760 | MtrunA17_Chr1g0206521 | 48.980 | 245 | 117 | 4 | 7 | 250 | 653 | 890 | 1.04e-63 | 215 |
| Msa0135760 | MtrunA17_Chr1g0206521 | 47.679 | 237 | 116 | 4 | 15 | 250 | 19 | 248 | 5.12e-59 | 201 |
| Msa0135760 | MtrunA17_Chr5g0428531 | 44.130 | 247 | 125 | 5 | 10 | 250 | 8 | 247 | 1.84e-62 | 197 |
| Msa0135760 | MtrunA17_Chr1g0206561 | 42.975 | 242 | 128 | 4 | 11 | 252 | 9 | 240 | 1.96e-56 | 191 |
| Msa0135760 | MtrunA17_Chr5g0426941 | 41.564 | 243 | 128 | 5 | 14 | 252 | 10 | 242 | 6.27e-53 | 181 |
| Msa0135760 | MtrunA17_Chr1g0206381 | 38.589 | 241 | 133 | 6 | 21 | 252 | 19 | 253 | 4.74e-49 | 164 |
| Msa0135760 | MtrunA17_Chr1g0206401 | 39.189 | 222 | 121 | 6 | 39 | 252 | 33 | 248 | 9.32e-45 | 159 |
| Msa0135760 | MtrunA17_Chr7g0234231 | 31.818 | 242 | 156 | 4 | 9 | 250 | 5 | 237 | 3.96e-40 | 139 |
| Msa0135760 | MtrunA17_Chr1g0206331 | 34.959 | 246 | 148 | 7 | 11 | 251 | 15 | 253 | 1.70e-35 | 133 |
| Msa0135760 | MtrunA17_Chr5g0428601 | 50.400 | 125 | 60 | 2 | 127 | 251 | 1 | 123 | 6.71e-34 | 125 |
| Msa0135760 | MtrunA17_Chr6g0475121 | 33.462 | 260 | 157 | 6 | 1 | 252 | 1 | 252 | 6.40e-33 | 125 |
| Msa0135760 | MtrunA17_Chr6g0475121 | 32.353 | 204 | 126 | 6 | 50 | 250 | 296 | 490 | 1.45e-22 | 96.3 |
| Msa0135760 | MtrunA17_Chr2g0323011 | 31.727 | 249 | 155 | 7 | 4 | 249 | 7 | 243 | 1.83e-32 | 119 |
| Msa0135760 | MtrunA17_Chr1g0205771 | 31.925 | 213 | 139 | 3 | 41 | 251 | 51 | 259 | 9.76e-32 | 122 |
| Msa0135760 | MtrunA17_Chr5g0394001 | 33.054 | 239 | 151 | 6 | 16 | 250 | 16 | 249 | 4.75e-31 | 120 |
| Msa0135760 | MtrunA17_Chr6g0475201 | 31.008 | 258 | 165 | 5 | 1 | 252 | 1 | 251 | 1.01e-29 | 117 |
| Msa0135760 | MtrunA17_Chr6g0475201 | 32.627 | 236 | 138 | 8 | 20 | 250 | 271 | 490 | 5.62e-27 | 109 |
| Msa0135760 | MtrunA17_Chr1g0206201 | 33.486 | 218 | 127 | 6 | 43 | 252 | 48 | 255 | 2.39e-29 | 111 |
| Msa0135760 | MtrunA17_Chr5g0393981 | 29.845 | 258 | 160 | 8 | 1 | 250 | 73 | 317 | 7.29e-29 | 114 |
| Msa0135760 | MtrunA17_Chr6g0474901 | 29.572 | 257 | 164 | 7 | 1 | 252 | 1 | 245 | 1.41e-28 | 114 |
| Msa0135760 | MtrunA17_Chr6g0474901 | 30.992 | 242 | 141 | 8 | 19 | 250 | 258 | 483 | 1.07e-22 | 97.1 |
| Msa0135760 | MtrunA17_Chr6g0475001 | 32.271 | 251 | 154 | 8 | 11 | 252 | 9 | 252 | 1.48e-28 | 113 |
| Msa0135760 | MtrunA17_Chr6g0475001 | 31.556 | 225 | 136 | 8 | 28 | 250 | 281 | 489 | 7.60e-19 | 85.5 |
| Msa0135760 | MtrunA17_Chr2g0322981 | 29.921 | 254 | 161 | 7 | 1 | 251 | 6 | 245 | 5.00e-28 | 107 |
| Msa0135760 | MtrunA17_Chr5g0394021 | 34.711 | 242 | 148 | 5 | 11 | 250 | 14 | 247 | 5.71e-28 | 112 |
| Msa0135760 | MtrunA17_Chr1g0206351 | 32.381 | 210 | 136 | 3 | 45 | 251 | 48 | 254 | 5.81e-28 | 112 |
| Msa0135760 | MtrunA17_Chr3g0081001 | 29.365 | 252 | 163 | 5 | 4 | 251 | 6 | 246 | 4.20e-27 | 109 |
| Msa0135760 | MtrunA17_Chr6g0474811 | 30.268 | 261 | 165 | 6 | 1 | 252 | 1 | 253 | 1.00e-26 | 108 |
| Msa0135760 | MtrunA17_Chr6g0474811 | 35.028 | 177 | 106 | 5 | 77 | 250 | 322 | 492 | 2.08e-20 | 90.1 |
| Msa0135760 | MtrunA17_Chr1g0206231 | 32.381 | 210 | 132 | 6 | 47 | 252 | 52 | 255 | 2.24e-26 | 107 |
| Msa0135760 | MtrunA17_Chr8g0347571 | 30.769 | 247 | 151 | 8 | 9 | 250 | 11 | 242 | 2.45e-26 | 107 |
| Msa0135760 | MtrunA17_Chr8g0347571 | 28.194 | 227 | 142 | 8 | 32 | 251 | 276 | 488 | 1.20e-16 | 79.3 |
| Msa0135760 | MtrunA17_Chr6g0474971 | 29.961 | 257 | 163 | 7 | 1 | 252 | 1 | 245 | 6.84e-26 | 103 |
| Msa0135760 | MtrunA17_Chr6g0474871 | 30.233 | 258 | 166 | 6 | 1 | 252 | 1 | 250 | 1.80e-25 | 105 |
| Msa0135760 | MtrunA17_Chr6g0474871 | 32.768 | 177 | 110 | 5 | 77 | 250 | 317 | 487 | 4.99e-19 | 86.3 |
| Msa0135760 | MtrunA17_Chr3g0081011 | 30.088 | 226 | 144 | 5 | 30 | 251 | 30 | 245 | 2.02e-25 | 104 |
| Msa0135760 | MtrunA17_Chr6g0475111 | 28.163 | 245 | 167 | 5 | 9 | 250 | 14 | 252 | 3.49e-25 | 103 |
| Msa0135760 | MtrunA17_Chr6g0475111 | 26.316 | 247 | 163 | 8 | 14 | 251 | 266 | 502 | 9.74e-18 | 82.4 |
| Msa0135760 | MtrunA17_Chr3g0081051 | 30.488 | 246 | 157 | 6 | 9 | 249 | 3 | 239 | 5.83e-25 | 99.8 |
| Msa0135760 | MtrunA17_Chr3g0081031 | 31.301 | 246 | 152 | 8 | 11 | 250 | 24 | 258 | 2.08e-24 | 101 |
| Msa0135760 | MtrunA17_Chr1g0206361 | 31.651 | 218 | 138 | 6 | 37 | 250 | 43 | 253 | 5.82e-24 | 100 |
| Msa0135760 | MtrunA17_Chr6g0475091 | 30.962 | 239 | 155 | 5 | 20 | 252 | 27 | 261 | 6.24e-24 | 100 |
| Msa0135760 | MtrunA17_Chr6g0475091 | 33.171 | 205 | 127 | 6 | 48 | 250 | 303 | 499 | 3.82e-20 | 89.4 |
| Msa0135760 | MtrunA17_Chr8g0354271 | 28.629 | 248 | 166 | 6 | 7 | 251 | 10 | 249 | 3.80e-23 | 98.2 |
| Msa0135760 | MtrunA17_Chr5g0394011 | 30.556 | 216 | 139 | 6 | 41 | 250 | 41 | 251 | 1.99e-22 | 95.9 |
| Msa0135760 | MtrunA17_Chr6g0474861 | 32.157 | 255 | 156 | 10 | 1 | 250 | 1 | 243 | 7.04e-22 | 94.4 |
| Msa0135760 | MtrunA17_Chr1g0206291 | 29.008 | 262 | 165 | 9 | 2 | 252 | 15 | 266 | 3.11e-21 | 92.4 |
| Msa0135760 | MtrunA17_Chr8g0354351 | 27.459 | 244 | 161 | 7 | 11 | 251 | 13 | 243 | 1.07e-20 | 90.9 |
| Msa0135760 | MtrunA17_Chr2g0280391 | 24.800 | 250 | 172 | 4 | 9 | 250 | 5 | 246 | 3.58e-19 | 84.3 |
| Msa0135760 | MtrunA17_Chr1g0206251 | 31.754 | 211 | 129 | 7 | 47 | 250 | 307 | 509 | 1.41e-18 | 84.7 |
| Msa0135760 | MtrunA17_Chr1g0206251 | 30.392 | 204 | 122 | 10 | 61 | 251 | 69 | 265 | 7.36e-14 | 70.9 |
| Msa0135760 | MtrunA17_Chr8g0354421 | 25.200 | 250 | 169 | 8 | 10 | 251 | 31 | 270 | 1.27e-17 | 82.0 |
| Msa0135760 | MtrunA17_Chr1g0206421 | 30.189 | 159 | 93 | 5 | 67 | 216 | 2 | 151 | 3.32e-17 | 80.5 |
| Msa0135760 | MtrunA17_Chr1g0206411 | 56.897 | 58 | 25 | 0 | 61 | 118 | 4 | 61 | 3.55e-17 | 74.3 |
| Msa0135760 | MtrunA17_Chr8g0354341 | 30.723 | 166 | 108 | 4 | 86 | 251 | 88 | 246 | 1.31e-16 | 77.0 |
| Msa0135760 | MtrunA17_Chr3g0119041 | 29.808 | 208 | 118 | 8 | 64 | 251 | 63 | 262 | 5.18e-16 | 77.0 |
| Msa0135760 | MtrunA17_Chr2g0280361 | 27.027 | 185 | 125 | 4 | 67 | 250 | 66 | 241 | 7.11e-16 | 75.1 |
| Msa0135760 | MtrunA17_Chr8g0354441 | 23.922 | 255 | 167 | 10 | 10 | 250 | 14 | 255 | 8.92e-16 | 76.6 |
| Msa0135760 | MtrunA17_Chr8g0354411 | 24.537 | 216 | 147 | 6 | 42 | 250 | 41 | 247 | 4.33e-15 | 73.6 |
| Msa0135760 | MtrunA17_Chr3g0082951 | 39.091 | 110 | 62 | 3 | 28 | 136 | 116 | 221 | 1.66e-13 | 67.8 |
| Msa0135760 | MtrunA17_Chr7g0230381 | 25.258 | 194 | 126 | 4 | 58 | 251 | 74 | 248 | 2.48e-13 | 68.2 |
| Msa0135760 | MtrunA17_Chr8g0354281 | 23.585 | 212 | 149 | 6 | 45 | 251 | 44 | 247 | 3.01e-13 | 68.9 |
| Msa0135760 | MtrunA17_Chr8g0354431 | 24.800 | 250 | 170 | 7 | 10 | 251 | 9 | 248 | 6.49e-12 | 65.1 |
| Msa0135760 | MtrunA17_Chr2g0280381 | 23.810 | 189 | 132 | 4 | 65 | 252 | 65 | 242 | 7.10e-12 | 63.9 |
| Msa0135760 | MtrunA17_Chr8g0391511 | 22.749 | 211 | 144 | 5 | 38 | 244 | 39 | 234 | 1.51e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0135760 | AT4G21410.2 | 38.073 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 1.05e-38 | 141 |
| Msa0135760 | AT4G21410.3 | 38.073 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 3.12e-38 | 141 |
| Msa0135760 | AT3G22060.1 | 34.884 | 215 | 134 | 3 | 38 | 252 | 43 | 251 | 1.02e-36 | 130 |
| Msa0135760 | AT4G38830.1 | 36.697 | 218 | 132 | 4 | 35 | 250 | 32 | 245 | 7.20e-36 | 135 |
| Msa0135760 | AT4G21400.3 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 3.94e-34 | 129 |
| Msa0135760 | AT4G21400.6 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 6.11e-34 | 129 |
| Msa0135760 | AT4G21400.4 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 6.11e-34 | 129 |
| Msa0135760 | AT4G21400.5 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 6.11e-34 | 129 |
| Msa0135760 | AT4G05200.1 | 35.060 | 251 | 148 | 8 | 5 | 250 | 8 | 248 | 6.52e-34 | 129 |
| Msa0135760 | AT4G05200.2 | 35.060 | 251 | 148 | 8 | 5 | 250 | 26 | 266 | 6.85e-34 | 129 |
| Msa0135760 | AT4G21400.2 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 9.80e-34 | 129 |
| Msa0135760 | AT4G21400.1 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 1.24e-33 | 128 |
| Msa0135760 | AT4G23160.1 | 36.864 | 236 | 133 | 8 | 21 | 250 | 37 | 262 | 6.05e-33 | 126 |
| Msa0135760 | AT4G23160.3 | 36.864 | 236 | 133 | 8 | 21 | 250 | 617 | 842 | 9.98e-33 | 126 |
| Msa0135760 | AT4G23160.2 | 36.864 | 236 | 133 | 8 | 21 | 250 | 617 | 842 | 9.98e-33 | 126 |
| Msa0135760 | AT4G23220.1 | 32.243 | 214 | 144 | 1 | 39 | 251 | 29 | 242 | 1.61e-32 | 125 |
| Msa0135760 | AT4G23180.3 | 36.325 | 234 | 134 | 8 | 21 | 250 | 31 | 253 | 1.94e-32 | 124 |
| Msa0135760 | AT4G23170.1 | 35.865 | 237 | 134 | 9 | 21 | 250 | 20 | 245 | 2.39e-32 | 119 |
| Msa0135760 | AT4G23180.2 | 36.325 | 234 | 134 | 8 | 21 | 250 | 31 | 253 | 3.63e-32 | 124 |
| Msa0135760 | AT4G21230.1 | 36.986 | 219 | 119 | 7 | 37 | 250 | 37 | 241 | 4.97e-32 | 124 |
| Msa0135760 | AT4G23180.1 | 36.325 | 234 | 134 | 8 | 21 | 250 | 31 | 253 | 5.68e-32 | 124 |
| Msa0135760 | AT4G23280.3 | 37.089 | 213 | 122 | 5 | 41 | 250 | 39 | 242 | 1.27e-31 | 122 |
| Msa0135760 | AT4G23280.1 | 37.089 | 213 | 122 | 5 | 41 | 250 | 39 | 242 | 1.40e-31 | 122 |
| Msa0135760 | AT4G23280.2 | 37.089 | 213 | 122 | 5 | 41 | 250 | 39 | 242 | 1.50e-31 | 122 |
| Msa0135760 | AT4G23200.2 | 31.308 | 214 | 142 | 2 | 41 | 249 | 30 | 243 | 7.53e-31 | 119 |
| Msa0135760 | AT4G23200.1 | 31.308 | 214 | 142 | 2 | 41 | 249 | 30 | 243 | 2.02e-30 | 119 |
| Msa0135760 | AT4G21400.7 | 35.429 | 175 | 109 | 2 | 78 | 251 | 56 | 227 | 1.16e-29 | 117 |
| Msa0135760 | AT4G23150.1 | 36.449 | 214 | 125 | 7 | 41 | 250 | 39 | 245 | 1.48e-29 | 117 |
| Msa0135760 | AT4G00970.2 | 38.378 | 185 | 104 | 5 | 66 | 246 | 79 | 257 | 1.59e-29 | 116 |
| Msa0135760 | AT4G00970.1 | 38.378 | 185 | 104 | 5 | 66 | 246 | 79 | 257 | 2.47e-29 | 116 |
| Msa0135760 | AT4G23130.3 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 1.63e-27 | 110 |
| Msa0135760 | AT4G23130.1 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 1.74e-27 | 110 |
| Msa0135760 | AT4G23130.2 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 1.94e-27 | 110 |
| Msa0135760 | AT4G23250.1 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 5.35e-27 | 109 |
| Msa0135760 | AT4G23250.3 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 5.99e-27 | 109 |
| Msa0135760 | AT4G23250.2 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 6.53e-27 | 109 |
| Msa0135760 | AT4G23250.2 | 26.471 | 204 | 125 | 4 | 47 | 250 | 741 | 919 | 5.82e-15 | 74.7 |
| Msa0135760 | AT4G23140.2 | 34.722 | 216 | 126 | 7 | 41 | 250 | 40 | 246 | 7.44e-27 | 109 |
| Msa0135760 | AT4G23140.1 | 34.722 | 216 | 126 | 7 | 41 | 250 | 40 | 246 | 9.22e-27 | 108 |
| Msa0135760 | AT4G23230.1 | 35.047 | 214 | 126 | 7 | 41 | 250 | 37 | 241 | 2.64e-26 | 107 |
| Msa0135760 | AT3G45860.1 | 35.648 | 216 | 122 | 6 | 41 | 250 | 43 | 247 | 6.70e-26 | 106 |
| Msa0135760 | AT4G11460.1 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 5.47e-25 | 103 |
| Msa0135760 | AT4G11460.3 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 5.67e-25 | 103 |
| Msa0135760 | AT4G23210.1 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 5.89e-25 | 103 |
| Msa0135760 | AT4G23210.2 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 8.30e-25 | 102 |
| Msa0135760 | AT4G23210.4 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 8.30e-25 | 102 |
| Msa0135760 | AT4G23210.3 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 8.65e-25 | 103 |
| Msa0135760 | AT4G23210.5 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 9.80e-25 | 102 |
| Msa0135760 | AT4G20640.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20630.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20580.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20600.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20620.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20610.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20590.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.21e-24 | 99.0 |
| Msa0135760 | AT4G20670.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 7 | 255 | 1.44e-24 | 99.0 |
| Msa0135760 | AT4G20570.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G20560.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G20540.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G20645.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G20530.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G20550.1 | 30.315 | 254 | 165 | 6 | 5 | 251 | 21 | 269 | 1.55e-24 | 99.0 |
| Msa0135760 | AT4G11530.1 | 27.727 | 220 | 147 | 3 | 39 | 249 | 30 | 246 | 1.93e-24 | 102 |
| Msa0135760 | AT4G23310.2 | 34.928 | 209 | 124 | 6 | 45 | 250 | 156 | 355 | 2.03e-24 | 102 |
| Msa0135760 | AT4G23310.1 | 34.762 | 210 | 123 | 7 | 45 | 250 | 156 | 355 | 2.04e-24 | 102 |
| Msa0135760 | AT4G23270.2 | 31.429 | 245 | 154 | 7 | 10 | 250 | 6 | 240 | 3.12e-24 | 101 |
| Msa0135760 | AT4G23270.1 | 31.429 | 245 | 154 | 7 | 10 | 250 | 6 | 240 | 3.12e-24 | 101 |
| Msa0135760 | AT4G23270.3 | 31.429 | 245 | 154 | 7 | 10 | 250 | 6 | 240 | 3.19e-24 | 101 |
| Msa0135760 | AT4G23300.1 | 28.761 | 226 | 143 | 4 | 37 | 249 | 30 | 250 | 3.83e-24 | 101 |
| Msa0135760 | AT5G48540.1 | 28.689 | 244 | 159 | 6 | 11 | 250 | 9 | 241 | 4.88e-24 | 97.4 |
| Msa0135760 | AT4G23240.1 | 30.918 | 207 | 138 | 3 | 47 | 250 | 41 | 245 | 6.06e-24 | 100 |
| Msa0135760 | AT3G21990.1 | 30.612 | 245 | 157 | 6 | 13 | 251 | 18 | 255 | 8.92e-24 | 96.7 |
| Msa0135760 | AT3G58310.1 | 29.630 | 243 | 156 | 7 | 16 | 252 | 23 | 256 | 9.66e-24 | 96.7 |
| Msa0135760 | AT4G23190.2 | 28.959 | 221 | 147 | 4 | 37 | 249 | 30 | 248 | 1.83e-23 | 99.4 |
| Msa0135760 | AT4G23190.1 | 28.959 | 221 | 147 | 4 | 37 | 249 | 30 | 248 | 2.10e-23 | 99.4 |
| Msa0135760 | AT2G31620.1 | 29.358 | 218 | 145 | 4 | 36 | 249 | 40 | 252 | 4.02e-23 | 95.1 |
| Msa0135760 | AT4G11521.1 | 27.313 | 227 | 157 | 3 | 28 | 249 | 18 | 241 | 6.94e-23 | 94.4 |
| Msa0135760 | AT4G04500.2 | 28.910 | 211 | 135 | 5 | 55 | 252 | 47 | 255 | 3.32e-21 | 92.4 |
| Msa0135760 | AT4G04500.3 | 28.910 | 211 | 135 | 5 | 55 | 252 | 47 | 255 | 3.32e-21 | 92.4 |
| Msa0135760 | AT4G04500.1 | 28.910 | 211 | 135 | 5 | 55 | 252 | 47 | 255 | 4.14e-21 | 92.4 |
| Msa0135760 | AT4G11490.1 | 27.982 | 218 | 147 | 3 | 10 | 222 | 8 | 220 | 1.05e-20 | 91.3 |
| Msa0135760 | AT3G21960.1 | 29.730 | 222 | 144 | 5 | 36 | 251 | 46 | 261 | 1.11e-20 | 88.6 |
| Msa0135760 | AT1G61750.1 | 29.224 | 219 | 148 | 4 | 29 | 245 | 28 | 241 | 1.28e-20 | 89.7 |
| Msa0135760 | AT4G21410.1 | 41.732 | 127 | 71 | 2 | 127 | 251 | 1 | 126 | 2.85e-20 | 90.1 |
| Msa0135760 | AT4G23260.2 | 26.009 | 223 | 158 | 3 | 32 | 249 | 30 | 250 | 6.88e-20 | 89.0 |
| Msa0135760 | AT4G21400.8 | 38.095 | 126 | 77 | 1 | 127 | 251 | 1 | 126 | 7.83e-20 | 88.6 |
| Msa0135760 | AT4G23260.1 | 26.009 | 223 | 158 | 3 | 32 | 249 | 30 | 250 | 8.45e-20 | 88.6 |
| Msa0135760 | AT3G21910.1 | 28.514 | 249 | 159 | 9 | 13 | 249 | 24 | 265 | 3.39e-19 | 84.7 |
| Msa0135760 | AT3G21940.2 | 34.973 | 183 | 96 | 6 | 88 | 252 | 3 | 180 | 1.09e-18 | 81.3 |
| Msa0135760 | AT4G04570.2 | 28.972 | 214 | 142 | 5 | 45 | 250 | 40 | 251 | 2.74e-18 | 84.3 |
| Msa0135760 | AT4G11480.2 | 22.115 | 208 | 154 | 3 | 45 | 249 | 36 | 238 | 2.85e-18 | 84.0 |
| Msa0135760 | AT4G04570.1 | 28.972 | 214 | 142 | 5 | 45 | 250 | 40 | 251 | 3.16e-18 | 84.0 |
| Msa0135760 | AT4G23290.2 | 28.507 | 221 | 144 | 7 | 38 | 249 | 31 | 246 | 3.47e-18 | 84.0 |
| Msa0135760 | AT4G11480.3 | 22.222 | 207 | 153 | 3 | 46 | 249 | 37 | 238 | 3.53e-18 | 84.0 |
| Msa0135760 | AT4G11480.4 | 22.222 | 207 | 153 | 3 | 46 | 249 | 37 | 238 | 3.59e-18 | 84.0 |
| Msa0135760 | AT3G21940.1 | 30.935 | 278 | 148 | 12 | 5 | 252 | 12 | 275 | 3.64e-18 | 82.0 |
| Msa0135760 | AT4G11480.1 | 22.222 | 207 | 153 | 3 | 46 | 249 | 37 | 238 | 4.24e-18 | 83.6 |
| Msa0135760 | AT5G41290.1 | 27.347 | 245 | 162 | 9 | 11 | 247 | 8 | 244 | 4.28e-18 | 82.0 |
| Msa0135760 | AT4G11460.2 | 30.114 | 176 | 113 | 4 | 83 | 249 | 1 | 175 | 7.05e-18 | 83.2 |
| Msa0135760 | AT3G21920.1 | 29.004 | 231 | 136 | 8 | 37 | 249 | 47 | 267 | 1.51e-17 | 80.1 |
| Msa0135760 | AT3G21920.2 | 29.004 | 231 | 136 | 8 | 37 | 249 | 69 | 289 | 1.90e-17 | 80.5 |
| Msa0135760 | AT1G63600.1 | 28.272 | 191 | 115 | 4 | 67 | 245 | 72 | 252 | 3.17e-17 | 80.1 |
| Msa0135760 | AT3G29040.1 | 28.846 | 260 | 166 | 9 | 1 | 249 | 1 | 252 | 4.48e-17 | 78.6 |
| Msa0135760 | AT3G21930.1 | 28.125 | 256 | 153 | 10 | 13 | 249 | 24 | 267 | 6.39e-17 | 78.6 |
| Msa0135760 | AT4G23190.3 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 7.16e-17 | 80.1 |
| Msa0135760 | AT4G23190.4 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 7.16e-17 | 80.1 |
| Msa0135760 | AT1G70690.1 | 25.794 | 252 | 160 | 10 | 1 | 245 | 2 | 233 | 1.27e-16 | 78.2 |
| Msa0135760 | AT3G22010.1 | 28.261 | 230 | 136 | 9 | 38 | 252 | 48 | 263 | 1.63e-16 | 77.0 |
| Msa0135760 | AT1G63550.1 | 24.444 | 225 | 140 | 4 | 36 | 246 | 37 | 245 | 1.86e-16 | 77.8 |
| Msa0135760 | AT4G04540.3 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 3.84e-16 | 77.8 |
| Msa0135760 | AT4G04540.4 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 4.53e-16 | 77.8 |
| Msa0135760 | AT4G04540.2 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 4.93e-16 | 77.8 |
| Msa0135760 | AT4G04540.1 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 5.35e-16 | 77.4 |
| Msa0135760 | AT4G11470.1 | 26.291 | 213 | 144 | 6 | 47 | 250 | 38 | 246 | 5.37e-16 | 77.4 |
| Msa0135760 | AT1G63570.3 | 26.984 | 189 | 117 | 3 | 68 | 246 | 64 | 241 | 6.60e-16 | 75.9 |
| Msa0135760 | AT1G63570.1 | 26.984 | 189 | 117 | 3 | 68 | 246 | 64 | 241 | 6.60e-16 | 75.9 |
| Msa0135760 | AT3G22040.1 | 26.432 | 227 | 142 | 7 | 38 | 252 | 44 | 257 | 6.97e-16 | 75.5 |
| Msa0135760 | AT4G11470.2 | 26.291 | 213 | 144 | 6 | 47 | 250 | 43 | 251 | 7.07e-16 | 77.4 |
| Msa0135760 | AT1G63570.2 | 26.984 | 189 | 117 | 3 | 68 | 246 | 117 | 294 | 8.94e-16 | 75.9 |
| Msa0135760 | AT4G04510.2 | 26.244 | 221 | 146 | 4 | 41 | 250 | 36 | 250 | 2.40e-15 | 75.5 |
| Msa0135760 | AT4G04510.1 | 26.244 | 221 | 146 | 4 | 41 | 250 | 34 | 248 | 2.42e-15 | 75.5 |
| Msa0135760 | AT4G04490.1 | 28.017 | 232 | 144 | 9 | 29 | 249 | 27 | 246 | 2.55e-15 | 75.5 |
| Msa0135760 | AT4G20680.1 | 28.968 | 252 | 159 | 10 | 13 | 252 | 24 | 267 | 3.91e-15 | 73.6 |
| Msa0135760 | AT3G22050.1 | 29.293 | 198 | 110 | 7 | 67 | 249 | 73 | 255 | 5.81e-15 | 72.8 |
| Msa0135760 | AT5G41280.1 | 26.230 | 183 | 126 | 4 | 68 | 246 | 67 | 244 | 8.24e-15 | 72.8 |
| Msa0135760 | AT3G21970.1 | 28.175 | 252 | 158 | 10 | 12 | 249 | 19 | 261 | 1.06e-14 | 72.0 |
| Msa0135760 | AT3G29050.2 | 26.437 | 261 | 159 | 9 | 13 | 249 | 22 | 273 | 1.39e-14 | 72.0 |
| Msa0135760 | AT3G22000.1 | 29.183 | 257 | 152 | 12 | 13 | 252 | 24 | 267 | 1.83e-14 | 71.6 |
| Msa0135760 | AT5G41300.1 | 25.514 | 243 | 161 | 7 | 10 | 244 | 15 | 245 | 6.86e-14 | 70.1 |
| Msa0135760 | AT2G01660.2 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.31e-13 | 68.9 |
| Msa0135760 | AT2G01660.1 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.70e-13 | 68.9 |
| Msa0135760 | AT2G01660.3 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.82e-13 | 68.9 |
| Msa0135760 | AT1G63590.1 | 26.000 | 200 | 125 | 6 | 59 | 245 | 55 | 244 | 3.04e-13 | 68.2 |
| Msa0135760 | AT3G21900.2 | 25.822 | 213 | 148 | 5 | 37 | 249 | 45 | 247 | 3.93e-13 | 67.8 |
| Msa0135760 | AT1G63580.1 | 24.528 | 212 | 138 | 4 | 46 | 245 | 36 | 237 | 5.91e-13 | 67.4 |
Find 42 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTTGGTACAATATTT+TGG | 0.104488 | 1_3:-67500585 | None:intergenic |
| TATTCAGACCGTTCGATATT+AGG | 0.205684 | 1_3:+67500303 | Msa0135760:CDS |
| CCAATTGCTTCCTTTCTGTT+TGG | 0.258695 | 1_3:-67500246 | None:intergenic |
| TGCTTTAGGTTTGATAGAAT+TGG | 0.336798 | 1_3:-67500656 | None:intergenic |
| GGTTTACTTTGTCCTCGTTT+TGG | 0.340580 | 1_3:-67500137 | None:intergenic |
| ATGAGAAGGAGGAAGGAATA+TGG | 0.349250 | 1_3:-67499937 | None:intergenic |
| AGACATTTGCGACAATCTTC+AGG | 0.362672 | 1_3:-67500189 | None:intergenic |
| GGTTTCTACAATACAAATTA+CGG | 0.363088 | 1_3:+67500114 | Msa0135760:CDS |
| AGTAGTGATCAAACAATATA+TGG | 0.388142 | 1_3:+67500489 | Msa0135760:CDS |
| TGGACATGCTTGTGTTAGAT+AGG | 0.389375 | 1_3:-67500226 | None:intergenic |
| AAATATTGTACCAACAAGAT+TGG | 0.404642 | 1_3:+67500588 | Msa0135760:CDS |
| AATTCTACAACCAATCTTGT+TGG | 0.410248 | 1_3:-67500598 | None:intergenic |
| TTAGAGCAAGCTGTTATTTG+AGG | 0.415196 | 1_3:+67500622 | Msa0135760:CDS |
| AAATGTGGCCTGCTATAATT+TGG | 0.425646 | 1_3:+67500334 | Msa0135760:CDS |
| CCAAACAGAAAGGAAGCAAT+TGG | 0.435428 | 1_3:+67500246 | Msa0135760:CDS |
| ACAGTGTACACCTGATTTGT+CGG | 0.437811 | 1_3:+67500518 | Msa0135760:CDS |
| CGTTTACTTTAGATGTGAAA+AGG | 0.440701 | 1_3:-67499963 | None:intergenic |
| CACTGTGAAACCGACAAATC+AGG | 0.458317 | 1_3:-67500528 | None:intergenic |
| GAATGTGAACAATGCAACTT+TGG | 0.483957 | 1_3:+67500359 | Msa0135760:CDS |
| TATATTGTTTGATCACTACT+AGG | 0.502209 | 1_3:-67500486 | None:intergenic |
| GAGGACAAAGTAAACCTCAT+TGG | 0.502261 | 1_3:+67500144 | Msa0135760:CDS |
| TATGCTGCAGGAACTTTGCC+AGG | 0.503711 | 1_3:+67500462 | Msa0135760:CDS |
| TTCAACTCAAAAGTTAACTA+CGG | 0.507432 | 1_3:+67500093 | Msa0135760:CDS |
| GATAGAGGCGACTACATAAC+CGG | 0.514752 | 1_3:+67500024 | Msa0135760:CDS |
| GTTGTTATGGTAGGTACTAC+CGG | 0.518720 | 1_3:-67500043 | None:intergenic |
| AAGGATTATGAGAAGGAGGA+AGG | 0.529566 | 1_3:-67499944 | None:intergenic |
| ACATTCCACCAAATTATAGC+AGG | 0.535057 | 1_3:-67500342 | None:intergenic |
| TGAAAAGGATTATGAGAAGG+AGG | 0.542640 | 1_3:-67499948 | None:intergenic |
| TCACATCGTAAGTATGCTGC+AGG | 0.560986 | 1_3:+67500450 | Msa0135760:CDS |
| ACAAGCATGTCCAAACAGAA+AGG | 0.568785 | 1_3:+67500236 | Msa0135760:CDS |
| ATGTGAAAAGGATTATGAGA+AGG | 0.570955 | 1_3:-67499951 | None:intergenic |
| TGTGGCCTGCTATAATTTGG+TGG | 0.578852 | 1_3:+67500337 | Msa0135760:CDS |
| GGCAGATCAATTCAATAGTG+TGG | 0.581827 | 1_3:+67500380 | Msa0135760:CDS |
| CTCCTCTACATATTCCAATG+AGG | 0.587463 | 1_3:-67500158 | None:intergenic |
| CGCTGAGGCCTAATATCGAA+CGG | 0.598988 | 1_3:-67500311 | None:intergenic |
| AACCTCATTGGAATATGTAG+AGG | 0.614721 | 1_3:+67500156 | Msa0135760:CDS |
| GTTTGATCACTACTAGGACC+TGG | 0.622316 | 1_3:-67500480 | None:intergenic |
| ACAGAAAGGAAGCAATTGGA+TGG | 0.635479 | 1_3:+67500250 | Msa0135760:CDS |
| TATTAGGCCTCAGCGAAATG+TGG | 0.638853 | 1_3:+67500319 | Msa0135760:CDS |
| TACAAATTACGGCCAAAACG+AGG | 0.648241 | 1_3:+67500125 | Msa0135760:CDS |
| GGAAGCAATTGGATGGTACG+AGG | 0.682205 | 1_3:+67500257 | Msa0135760:CDS |
| TAGCAGGCCACATTTCGCTG+AGG | 0.701616 | 1_3:-67500326 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGAATGATTTAAAAAACA+AGG | + | chr1_3:67500413-67500432 | Msa0135760:CDS | 20.0% |
| !! | GTTGAATGATTTAAAAAACA+AGG | + | chr1_3:67500413-67500432 | Msa0135760:CDS | 20.0% |
| !!! | GTTATTTTTGTCACATAAGT+AGG | - | chr1_3:67500004-67500023 | None:intergenic | 25.0% |
| ! | TTCAACTCAAAAGTTAACTA+CGG | + | chr1_3:67500093-67500112 | Msa0135760:CDS | 25.0% |
| ! | GGTTTCTACAATACAAATTA+CGG | + | chr1_3:67500114-67500133 | Msa0135760:CDS | 25.0% |
| ! | TTAAAAAACAAGGCTAGAAA+TGG | + | chr1_3:67500423-67500442 | Msa0135760:CDS | 25.0% |
| ! | TATATTGTTTGATCACTACT+AGG | - | chr1_3:67500489-67500508 | None:intergenic | 25.0% |
| ! | AGTAGTGATCAAACAATATA+TGG | + | chr1_3:67500489-67500508 | Msa0135760:CDS | 25.0% |
| !! | TCTTGTTGGTACAATATTTT+GGG | - | chr1_3:67500587-67500606 | None:intergenic | 25.0% |
| !! | ATCTTGTTGGTACAATATTT+TGG | - | chr1_3:67500588-67500607 | None:intergenic | 25.0% |
| ! | AAATATTGTACCAACAAGAT+TGG | + | chr1_3:67500588-67500607 | Msa0135760:CDS | 25.0% |
| !!! | GTTATTTTTGTCACATAAGT+AGG | - | chr1_3:67500004-67500023 | None:intergenic | 25.0% |
| ! | TTCAACTCAAAAGTTAACTA+CGG | + | chr1_3:67500093-67500112 | Msa0135760:CDS | 25.0% |
| ! | GGTTTCTACAATACAAATTA+CGG | + | chr1_3:67500114-67500133 | Msa0135760:CDS | 25.0% |
| ! | TTAAAAAACAAGGCTAGAAA+TGG | + | chr1_3:67500423-67500442 | Msa0135760:CDS | 25.0% |
| ! | TATATTGTTTGATCACTACT+AGG | - | chr1_3:67500489-67500508 | None:intergenic | 25.0% |
| ! | AGTAGTGATCAAACAATATA+TGG | + | chr1_3:67500489-67500508 | Msa0135760:CDS | 25.0% |
| !! | TCTTGTTGGTACAATATTTT+GGG | - | chr1_3:67500587-67500606 | None:intergenic | 25.0% |
| !! | ATCTTGTTGGTACAATATTT+TGG | - | chr1_3:67500588-67500607 | None:intergenic | 25.0% |
| ! | AAATATTGTACCAACAAGAT+TGG | + | chr1_3:67500588-67500607 | Msa0135760:CDS | 25.0% |
| ATGTGAAAAGGATTATGAGA+AGG | - | chr1_3:67499954-67499973 | None:intergenic | 30.0% | |
| CGTTTACTTTAGATGTGAAA+AGG | - | chr1_3:67499966-67499985 | None:intergenic | 30.0% | |
| TGTGACAAAAATAACGATAG+AGG | + | chr1_3:67500009-67500028 | Msa0135760:CDS | 30.0% | |
| !!! | TAACTTTTGAGTTGAAAGTG+AGG | - | chr1_3:67500089-67500108 | None:intergenic | 30.0% |
| AATTCTACAACCAATCTTGT+TGG | - | chr1_3:67500601-67500620 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATTATGAGA+AGG | - | chr1_3:67499954-67499973 | None:intergenic | 30.0% | |
| CGTTTACTTTAGATGTGAAA+AGG | - | chr1_3:67499966-67499985 | None:intergenic | 30.0% | |
| TGTGACAAAAATAACGATAG+AGG | + | chr1_3:67500009-67500028 | Msa0135760:CDS | 30.0% | |
| !!! | TAACTTTTGAGTTGAAAGTG+AGG | - | chr1_3:67500089-67500108 | None:intergenic | 30.0% |
| AATTCTACAACCAATCTTGT+TGG | - | chr1_3:67500601-67500620 | None:intergenic | 30.0% | |
| TGAAAAGGATTATGAGAAGG+AGG | - | chr1_3:67499951-67499970 | None:intergenic | 35.0% | |
| !!! | GATTTTGAGGTTGTTATGGT+AGG | - | chr1_3:67500055-67500074 | None:intergenic | 35.0% |
| !!! | AAGCGATTTTGAGGTTGTTA+TGG | - | chr1_3:67500059-67500078 | None:intergenic | 35.0% |
| ! | GGTATATGAAAGCGATTTTG+AGG | - | chr1_3:67500068-67500087 | None:intergenic | 35.0% |
| AACCTCATTGGAATATGTAG+AGG | + | chr1_3:67500156-67500175 | Msa0135760:CDS | 35.0% | |
| TATTCAGACCGTTCGATATT+AGG | + | chr1_3:67500303-67500322 | Msa0135760:CDS | 35.0% | |
| AAATGTGGCCTGCTATAATT+TGG | + | chr1_3:67500334-67500353 | Msa0135760:CDS | 35.0% | |
| ACATTCCACCAAATTATAGC+AGG | - | chr1_3:67500345-67500364 | None:intergenic | 35.0% | |
| GAATGTGAACAATGCAACTT+TGG | + | chr1_3:67500359-67500378 | Msa0135760:CDS | 35.0% | |
| ! | TTAGAGCAAGCTGTTATTTG+AGG | + | chr1_3:67500622-67500641 | Msa0135760:CDS | 35.0% |
| TGAAAAGGATTATGAGAAGG+AGG | - | chr1_3:67499951-67499970 | None:intergenic | 35.0% | |
| !!! | GATTTTGAGGTTGTTATGGT+AGG | - | chr1_3:67500055-67500074 | None:intergenic | 35.0% |
| !!! | AAGCGATTTTGAGGTTGTTA+TGG | - | chr1_3:67500059-67500078 | None:intergenic | 35.0% |
| ! | GGTATATGAAAGCGATTTTG+AGG | - | chr1_3:67500068-67500087 | None:intergenic | 35.0% |
| AACCTCATTGGAATATGTAG+AGG | + | chr1_3:67500156-67500175 | Msa0135760:CDS | 35.0% | |
| TATTCAGACCGTTCGATATT+AGG | + | chr1_3:67500303-67500322 | Msa0135760:CDS | 35.0% | |
| AAATGTGGCCTGCTATAATT+TGG | + | chr1_3:67500334-67500353 | Msa0135760:CDS | 35.0% | |
| ACATTCCACCAAATTATAGC+AGG | - | chr1_3:67500345-67500364 | None:intergenic | 35.0% | |
| GAATGTGAACAATGCAACTT+TGG | + | chr1_3:67500359-67500378 | Msa0135760:CDS | 35.0% | |
| ! | TTAGAGCAAGCTGTTATTTG+AGG | + | chr1_3:67500622-67500641 | Msa0135760:CDS | 35.0% |
| ATGAGAAGGAGGAAGGAATA+TGG | - | chr1_3:67499940-67499959 | None:intergenic | 40.0% | |
| AAGGATTATGAGAAGGAGGA+AGG | - | chr1_3:67499947-67499966 | None:intergenic | 40.0% | |
| GTTGTTATGGTAGGTACTAC+CGG | - | chr1_3:67500046-67500065 | None:intergenic | 40.0% | |
| TACAAATTACGGCCAAAACG+AGG | + | chr1_3:67500125-67500144 | Msa0135760:CDS | 40.0% | |
| ! | GGTTTACTTTGTCCTCGTTT+TGG | - | chr1_3:67500140-67500159 | None:intergenic | 40.0% |
| GAGGACAAAGTAAACCTCAT+TGG | + | chr1_3:67500144-67500163 | Msa0135760:CDS | 40.0% | |
| CTCCTCTACATATTCCAATG+AGG | - | chr1_3:67500161-67500180 | None:intergenic | 40.0% | |
| AGACATTTGCGACAATCTTC+AGG | - | chr1_3:67500192-67500211 | None:intergenic | 40.0% | |
| TGGACATGCTTGTGTTAGAT+AGG | - | chr1_3:67500229-67500248 | None:intergenic | 40.0% | |
| ACAAGCATGTCCAAACAGAA+AGG | + | chr1_3:67500236-67500255 | Msa0135760:CDS | 40.0% | |
| CCAATTGCTTCCTTTCTGTT+TGG | - | chr1_3:67500249-67500268 | None:intergenic | 40.0% | |
| CCAAACAGAAAGGAAGCAAT+TGG | + | chr1_3:67500246-67500265 | Msa0135760:CDS | 40.0% | |
| ACAGAAAGGAAGCAATTGGA+TGG | + | chr1_3:67500250-67500269 | Msa0135760:CDS | 40.0% | |
| GGCAGATCAATTCAATAGTG+TGG | + | chr1_3:67500380-67500399 | Msa0135760:CDS | 40.0% | |
| ! | ACAGTGTACACCTGATTTGT+CGG | + | chr1_3:67500518-67500537 | Msa0135760:CDS | 40.0% |
| ATGAGAAGGAGGAAGGAATA+TGG | - | chr1_3:67499940-67499959 | None:intergenic | 40.0% | |
| AAGGATTATGAGAAGGAGGA+AGG | - | chr1_3:67499947-67499966 | None:intergenic | 40.0% | |
| GTTGTTATGGTAGGTACTAC+CGG | - | chr1_3:67500046-67500065 | None:intergenic | 40.0% | |
| TACAAATTACGGCCAAAACG+AGG | + | chr1_3:67500125-67500144 | Msa0135760:CDS | 40.0% | |
| ! | GGTTTACTTTGTCCTCGTTT+TGG | - | chr1_3:67500140-67500159 | None:intergenic | 40.0% |
| GAGGACAAAGTAAACCTCAT+TGG | + | chr1_3:67500144-67500163 | Msa0135760:CDS | 40.0% | |
| CTCCTCTACATATTCCAATG+AGG | - | chr1_3:67500161-67500180 | None:intergenic | 40.0% | |
| AGACATTTGCGACAATCTTC+AGG | - | chr1_3:67500192-67500211 | None:intergenic | 40.0% | |
| TGGACATGCTTGTGTTAGAT+AGG | - | chr1_3:67500229-67500248 | None:intergenic | 40.0% | |
| ACAAGCATGTCCAAACAGAA+AGG | + | chr1_3:67500236-67500255 | Msa0135760:CDS | 40.0% | |
| CCAATTGCTTCCTTTCTGTT+TGG | - | chr1_3:67500249-67500268 | None:intergenic | 40.0% | |
| CCAAACAGAAAGGAAGCAAT+TGG | + | chr1_3:67500246-67500265 | Msa0135760:CDS | 40.0% | |
| ACAGAAAGGAAGCAATTGGA+TGG | + | chr1_3:67500250-67500269 | Msa0135760:CDS | 40.0% | |
| GGCAGATCAATTCAATAGTG+TGG | + | chr1_3:67500380-67500399 | Msa0135760:CDS | 40.0% | |
| ! | ACAGTGTACACCTGATTTGT+CGG | + | chr1_3:67500518-67500537 | Msa0135760:CDS | 40.0% |
| GATAGAGGCGACTACATAAC+CGG | + | chr1_3:67500024-67500043 | Msa0135760:CDS | 45.0% | |
| TATTAGGCCTCAGCGAAATG+TGG | + | chr1_3:67500319-67500338 | Msa0135760:CDS | 45.0% | |
| TGTGGCCTGCTATAATTTGG+TGG | + | chr1_3:67500337-67500356 | Msa0135760:CDS | 45.0% | |
| TCACATCGTAAGTATGCTGC+AGG | + | chr1_3:67500450-67500469 | Msa0135760:CDS | 45.0% | |
| GTTTGATCACTACTAGGACC+TGG | - | chr1_3:67500483-67500502 | None:intergenic | 45.0% | |
| CACTGTGAAACCGACAAATC+AGG | - | chr1_3:67500531-67500550 | None:intergenic | 45.0% | |
| GATAGAGGCGACTACATAAC+CGG | + | chr1_3:67500024-67500043 | Msa0135760:CDS | 45.0% | |
| TATTAGGCCTCAGCGAAATG+TGG | + | chr1_3:67500319-67500338 | Msa0135760:CDS | 45.0% | |
| TGTGGCCTGCTATAATTTGG+TGG | + | chr1_3:67500337-67500356 | Msa0135760:CDS | 45.0% | |
| TCACATCGTAAGTATGCTGC+AGG | + | chr1_3:67500450-67500469 | Msa0135760:CDS | 45.0% | |
| GTTTGATCACTACTAGGACC+TGG | - | chr1_3:67500483-67500502 | None:intergenic | 45.0% | |
| CACTGTGAAACCGACAAATC+AGG | - | chr1_3:67500531-67500550 | None:intergenic | 45.0% | |
| GGAAGCAATTGGATGGTACG+AGG | + | chr1_3:67500257-67500276 | Msa0135760:CDS | 50.0% | |
| CGCTGAGGCCTAATATCGAA+CGG | - | chr1_3:67500314-67500333 | None:intergenic | 50.0% | |
| TATGCTGCAGGAACTTTGCC+AGG | + | chr1_3:67500462-67500481 | Msa0135760:CDS | 50.0% | |
| GGAAGCAATTGGATGGTACG+AGG | + | chr1_3:67500257-67500276 | Msa0135760:CDS | 50.0% | |
| CGCTGAGGCCTAATATCGAA+CGG | - | chr1_3:67500314-67500333 | None:intergenic | 50.0% | |
| TATGCTGCAGGAACTTTGCC+AGG | + | chr1_3:67500462-67500481 | Msa0135760:CDS | 50.0% | |
| TAGCAGGCCACATTTCGCTG+AGG | - | chr1_3:67500329-67500348 | None:intergenic | 55.0% | |
| TAGCAGGCCACATTTCGCTG+AGG | - | chr1_3:67500329-67500348 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 67499916 | 67500674 | 67499916 | ID=Msa0135760;Name=Msa0135760 |
| chr1_3 | mRNA | 67499916 | 67500674 | 67499916 | ID=Msa0135760-mRNA-1;Parent=Msa0135760;Name=Msa0135760-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|252 |
| chr1_3 | exon | 67499916 | 67500674 | 67499916 | ID=Msa0135760-mRNA-1:exon:23161;Parent=Msa0135760-mRNA-1 |
| chr1_3 | CDS | 67499916 | 67500674 | 67499916 | ID=Msa0135760-mRNA-1:cds;Parent=Msa0135760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
