AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0129770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129770 MtrunA17_Chr1g0196911 97.124 1495 21 3 8 1494 1 1481 0.0 2982
Msa0129770 MtrunA17_Chr8g0390311 42.047 987 507 17 527 1494 395 1335 0.0 727
Msa0129770 MtrunA17_Chr2g0295801 25.815 798 545 20 719 1491 371 1146 1.61e-69 256
Msa0129770 MtrunA17_Chr2g0295801 33.533 167 104 2 7 173 1 160 7.65e-17 87.0
Msa0129770 MtrunA17_Chr2g0291731 31.309 527 343 8 647 1157 376 899 3.37e-58 219
Msa0129770 MtrunA17_Chr7g0214471 28.774 424 267 15 790 1184 637 1054 2.08e-27 121
Msa0129770 MtrunA17_Chr7g0214471 34.969 163 101 3 489 647 554 715 4.74e-22 103
Msa0129770 MtrunA17_Chr7g0214471 26.667 240 137 5 15 249 200 405 4.43e-15 81.3
Msa0129770 MtrunA17_Chr4g0031431 25.472 424 246 19 528 928 256 632 2.11e-17 88.2
Msa0129770 MtrunA17_Chr4g0044631 47.561 82 40 2 518 598 5 84 1.72e-16 84.0
Msa0129770 MtrunA17_Chr3g0122721 50.000 72 35 1 527 598 280 350 2.57e-16 84.7
Msa0129770 MtrunA17_Chr7g0275081 50.000 78 37 2 527 603 78 154 3.37e-16 83.2
Msa0129770 MtrunA17_Chr4g0044411 29.004 231 131 6 483 703 233 440 6.19e-16 83.6
Msa0129770 MtrunA17_Chr8g0377151 33.884 121 77 2 480 598 233 352 7.56e-15 80.1
Msa0129770 MtrunA17_Chr1g0199321 37.671 146 80 6 528 664 248 391 1.05e-14 79.3
Msa0129770 MtrunA17_Chr7g0237931 49.296 71 35 1 528 598 238 307 1.75e-14 78.6
Msa0129770 MtrunA17_Chr7g0275961 47.945 73 37 1 526 598 254 325 2.00e-14 79.0
Msa0129770 MtrunA17_Chr1g0177301 48.684 76 38 1 528 602 7 82 2.08e-14 77.4
Msa0129770 MtrunA17_Chr7g0248251 47.887 71 36 1 528 598 275 344 2.10e-14 78.6
Msa0129770 MtrunA17_Chr4g0059201 33.758 157 88 6 519 661 311 465 2.24e-14 78.6
Msa0129770 MtrunA17_Chr5g0413681 42.708 96 41 3 530 624 283 365 4.15e-14 77.4
Msa0129770 MtrunA17_Chr7g0234671 42.500 80 44 2 528 606 79 157 1.01e-13 75.5
Msa0129770 MtrunA17_Chr2g0322021 45.122 82 38 3 528 604 7 86 1.70e-13 74.3
Msa0129770 MtrunA17_Chr5g0434171 41.860 86 45 3 528 612 36 117 2.00e-13 74.3
Msa0129770 MtrunA17_Chr1g0177261 35.135 111 60 3 531 636 11 114 3.15e-13 73.9
Msa0129770 MtrunA17_Chr1g0177281 35.135 111 60 3 531 636 11 114 3.17e-13 73.9
Msa0129770 MtrunA17_Chr3g0106931 45.833 72 36 2 528 598 234 303 3.43e-13 74.7
Msa0129770 MtrunA17_Chr2g0284461 48.529 68 32 2 528 594 293 358 6.63e-13 73.6
Msa0129770 MtrunA17_Chr7g0267501 49.275 69 33 2 528 594 9 77 7.12e-13 72.8
Msa0129770 MtrunA17_Chr1g0177271 41.772 79 41 2 531 604 11 89 1.04e-12 72.0
Msa0129770 MtrunA17_Chr5g0400971 42.268 97 53 2 528 623 68 162 1.11e-12 72.0
Msa0129770 MtrunA17_Chr8g0373031 32.759 116 74 2 483 598 234 345 1.68e-12 72.4
Msa0129770 MtrunA17_Chr7g0261371 43.421 76 40 2 524 598 238 311 2.08e-12 72.0
Msa0129770 MtrunA17_Chr3g0110121 40.625 96 48 4 518 612 31 118 2.57e-12 70.9
Msa0129770 MtrunA17_Chr5g0420471 43.056 72 38 2 528 598 26 95 2.87e-12 70.9
Msa0129770 MtrunA17_Chr4g0043451 25.306 245 140 7 12 247 104 314 3.17e-12 69.7
Msa0129770 MtrunA17_Chr6g0479261 43.056 72 38 2 528 598 26 95 5.26e-12 70.1
Msa0129770 MtrunA17_Chr1g0183781 44.118 68 35 2 528 594 242 307 6.66e-12 70.5
Msa0129770 MtrunA17_Chr3g0117851 30.556 180 110 6 528 702 276 445 8.70e-12 70.1
Msa0129770 MtrunA17_Chr4g0048811 40.964 83 48 1 528 610 6 87 9.65e-12 68.2
Msa0129770 MtrunA17_Chr1g0198984 37.838 111 63 5 540 646 1 109 5.09e-11 61.2
Msa0129770 MtrunA17_Chr1g0152291 48.529 68 32 2 528 594 46 111 5.60e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129770 AT3G06880.2 25.881 823 566 22 694 1491 458 1261 3.13e-65 244
Msa0129770 AT3G06880.2 32.258 155 101 2 18 171 23 174 7.75e-14 77.8
Msa0129770 AT3G06880.1 25.795 818 563 22 694 1486 458 1256 6.91e-64 239
Msa0129770 AT3G06880.1 32.258 155 101 2 18 171 23 174 7.29e-14 77.8
Msa0129770 AT3G06880.4 24.855 861 565 22 694 1491 458 1299 1.47e-61 232
Msa0129770 AT3G06880.4 32.258 155 101 2 18 171 23 174 7.25e-14 77.8
Msa0129770 AT3G06880.3 26.200 729 504 16 694 1401 458 1173 8.20e-60 226
Msa0129770 AT3G06880.3 32.258 155 101 2 18 171 23 174 6.99e-14 77.8
Msa0129770 AT3G06880.5 26.200 729 504 16 694 1401 458 1173 8.80e-60 226
Msa0129770 AT3G06880.5 32.258 155 101 2 18 171 23 174 7.46e-14 77.8
Msa0129770 AT1G23030.1 24.651 430 246 19 517 924 235 608 8.76e-18 89.7
Msa0129770 AT1G49780.1 50.000 82 38 2 518 598 5 84 4.95e-17 85.9
Msa0129770 AT5G42340.1 51.389 72 32 2 528 598 291 360 9.44e-16 83.2
Msa0129770 AT1G27910.1 29.596 223 124 8 525 735 277 478 1.24e-15 83.2
Msa0129770 AT2G28830.1 45.833 72 38 1 527 598 184 254 1.55e-15 82.4
Msa0129770 AT1G68940.1 39.062 128 70 5 477 598 247 372 3.31e-15 82.0
Msa0129770 AT1G68940.2 39.062 128 70 5 477 598 247 372 3.73e-15 82.0
Msa0129770 AT3G46510.1 49.296 71 35 1 528 598 257 326 4.02e-15 81.3
Msa0129770 AT1G68940.3 39.062 128 70 5 477 598 194 319 4.12e-15 81.6
Msa0129770 AT3G54850.1 43.269 104 55 3 528 629 249 350 1.08e-14 79.7
Msa0129770 AT4G21350.1 44.944 89 43 2 528 610 6 94 1.21e-14 78.2
Msa0129770 AT1G29340.1 29.297 256 159 8 528 777 306 545 1.30e-14 79.7
Msa0129770 AT1G24330.1 48.611 72 36 1 527 598 275 345 3.70e-14 78.2
Msa0129770 AT1G24330.2 48.611 72 36 1 527 598 275 345 3.70e-14 78.2
Msa0129770 AT1G67530.3 50.000 72 35 1 527 598 272 342 3.83e-14 77.8
Msa0129770 AT1G71020.2 43.158 95 48 3 517 610 89 178 4.17e-14 77.4
Msa0129770 AT1G67530.2 50.000 72 35 1 527 598 272 342 4.36e-14 78.2
Msa0129770 AT1G67530.1 50.000 72 35 1 527 598 272 342 4.36e-14 78.2
Msa0129770 AT1G67530.4 50.000 72 35 1 527 598 272 342 4.36e-14 78.2
Msa0129770 AT1G71020.1 43.158 95 48 3 517 610 237 326 5.36e-14 77.4
Msa0129770 AT3G19380.1 45.783 83 41 3 518 598 5 85 6.11e-14 76.3
Msa0129770 AT1G10560.1 40.506 79 40 1 499 577 267 338 7.27e-13 73.9
Msa0129770 AT1G60190.1 46.377 69 36 1 530 598 281 348 7.30e-13 73.9
Msa0129770 AT3G07360.1 37.931 87 49 2 512 598 63 144 3.45e-12 71.2
Msa0129770 AT5G65920.1 41.860 86 49 1 528 613 61 145 5.24e-12 70.5
Msa0129770 AT5G65920.2 41.860 86 49 1 528 613 61 145 5.24e-12 70.5
Msa0129770 AT5G01830.1 48.529 68 32 2 528 594 275 340 7.61e-12 70.5
Msa0129770 AT3G49810.1 27.193 342 204 11 528 864 65 366 1.63e-11 68.9
Msa0129770 AT5G67340.1 32.283 127 66 3 528 637 241 364 1.70e-11 69.7
Msa0129770 AT5G67340.2 32.283 127 66 3 528 637 241 364 1.70e-11 69.7
Msa0129770 AT2G23140.2 42.857 70 37 2 530 598 233 300 2.56e-11 68.9
Msa0129770 AT2G23140.4 42.857 70 37 2 530 598 233 300 2.56e-11 68.9
Msa0129770 AT2G23140.1 42.857 70 37 2 530 598 236 303 2.56e-11 68.9
Msa0129770 AT2G23140.3 42.857 70 37 2 530 598 44 111 2.81e-11 68.9
Msa0129770 AT2G23140.5 42.857 70 37 2 530 598 44 111 2.81e-11 68.9
Msa0129770 AT3G54790.2 39.474 76 43 2 524 598 199 272 4.80e-11 68.2
Msa0129770 AT3G54790.3 39.474 76 43 2 524 598 235 308 5.08e-11 68.2
Msa0129770 AT3G54790.1 39.474 76 43 2 524 598 235 308 5.08e-11 68.2

Find 255 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAATCTATCCTATTTA+TGG 0.070332 1_3:+59855352 Msa0129770:CDS
TCAAGCAGTATTAGCAAATT+TGG 0.142722 1_3:+59855167 Msa0129770:CDS
ATATTTGCTGGTACGAAATT+TGG 0.145147 1_3:+59861503 Msa0129770:CDS
GCACTCAAACTTTGAATTCT+TGG 0.157535 1_3:+59855928 Msa0129770:CDS
TCCAGCCATAGTTAAGTATT+TGG 0.170433 1_3:+59858240 Msa0129770:CDS
GTAAAATGCCTTGCTGTTTC+TGG 0.178774 1_3:+59860944 Msa0129770:CDS
GATGCTTTACTATTTCTTAT+TGG 0.180264 1_3:+59859178 Msa0129770:CDS
TGCAATTTCTCAAGCTGATT+TGG 0.216622 1_3:-59855630 None:intergenic
GTTCCTCAATTTCCATAAAT+AGG 0.235200 1_3:-59855364 None:intergenic
CCAGAACTCTTGGGCAAAAT+AGG 0.235664 1_3:-59855843 None:intergenic
TAGCGATCCCACCACCATTT+TGG 0.246740 1_3:-59861435 None:intergenic
GAGAATTCATTTGATTCTTT+TGG 0.256304 1_3:-59856497 None:intergenic
AAGCTTAGTTTCCATATTAT+AGG 0.258565 1_3:-59855226 None:intergenic
CAAGCTGATAAATATGAATT+TGG 0.264134 1_3:-59855324 None:intergenic
TCTTCTTCAACTTGATCTTT+TGG 0.265796 1_3:+59858962 Msa0129770:CDS
ATTGCTATGGCGGCAGCTTT+AGG 0.273435 1_3:-59858139 None:intergenic
CCTTGATTATCTGTAATATA+TGG 0.282963 1_3:-59858854 None:intergenic
CATAGGTTTGGCCTGTTTCA+AGG 0.293403 1_3:-59857304 None:intergenic
GAATGAAGTTGATGTATATT+TGG 0.301436 1_3:-59861214 None:intergenic
TGGTTTGATCGATATACTTT+TGG 0.305731 1_3:-59856477 None:intergenic
AGCTATTAATACCTATAATA+TGG 0.312268 1_3:+59855215 Msa0129770:CDS
GAGTTATTTGAAGCTCTTCT+TGG 0.312945 1_3:-59856543 None:intergenic
TTGCTATGGCGGCAGCTTTA+GGG 0.317352 1_3:-59858138 None:intergenic
GCTAGCAGCCAATGCTAAAA+TGG 0.323662 1_3:+59860758 Msa0129770:CDS
AGATTCCATAGGAGATATAT+TGG 0.323789 1_3:-59856520 None:intergenic
GTTTCATTTAAACCATCATT+AGG 0.335077 1_3:-59855888 None:intergenic
CCGAGTTGCTTCCATCAAAA+TGG 0.336928 1_3:+59861559 Msa0129770:CDS
AACAGTGACTTCATATTTGC+TGG 0.339514 1_3:+59861491 Msa0129770:CDS
CACTGCCGATGAAGAAGTTA+TGG 0.343363 1_3:+59856698 Msa0129770:CDS
TTCTTGCTTGAGGTAGAATC+AGG 0.346848 1_3:-59855732 None:intergenic
CACGAAAGATGAGCATTTAC+AGG 0.350246 1_3:+59859083 Msa0129770:CDS
TTTAATGAAGGCCGAGCAAT+TGG 0.353830 1_3:+59859279 Msa0129770:CDS
TCCAAATACTTAACTATGGC+TGG 0.361952 1_3:-59858241 None:intergenic
AGTATTAGCAAATTTGGATT+GGG 0.363457 1_3:+59855173 Msa0129770:CDS
TAGATAGTTTCATTCAAGAT+AGG 0.364465 1_3:+59855040 Msa0129770:CDS
CACTGGTACAAGAAAATTGT+TGG 0.365532 1_3:+59861239 Msa0129770:CDS
AATTTGGCACCATTGAAGTT+TGG 0.369646 1_3:+59861519 Msa0129770:CDS
GAGAATTCTTGAGCTAGTTC+AGG 0.370421 1_3:-59857464 None:intergenic
GCCTTCATTAAAACATTGTA+AGG 0.371880 1_3:-59859268 None:intergenic
CAAATTCATATTTATCAGCT+TGG 0.372525 1_3:+59855325 Msa0129770:CDS
ATTGGACAAACAAAATCTTT+TGG 0.373432 1_3:-59857251 None:intergenic
CATAGAAAATCCAGAACTCT+TGG 0.374741 1_3:-59855853 None:intergenic
CGGTTCAATATTTCAAGCTT+TGG 0.377443 1_3:+59859491 Msa0129770:CDS
TTCTACCTCAGTTTCTTTGT+CGG 0.378240 1_3:-59855136 None:intergenic
GGACCAAACTTTACAAAATC+AGG 0.378419 1_3:-59855822 None:intergenic
CCTCCAGGTTCTTGGATGAC+TGG 0.381799 1_3:-59859662 None:intergenic
TCTTTAAGGAGTTACTCTTT+AGG 0.382578 1_3:-59859521 None:intergenic
CTTTCTTTGCATTATCTGAA+TGG 0.385001 1_3:+59860092 Msa0129770:CDS
AGATTCTGACTTTGATTGCT+TGG 0.387132 1_3:+59857958 Msa0129770:CDS
AAATATGAAGTCACTGTTGA+TGG 0.388514 1_3:-59861486 None:intergenic
TTTGTCCAAATACTTAACTA+TGG 0.388731 1_3:-59858245 None:intergenic
AACTCATATGTGGAAGAAAC+AGG 0.388802 1_3:-59855479 None:intergenic
AACAGAATTTAAGTTTAGTA+AGG 0.390805 1_3:-59859914 None:intergenic
CACTACTTATTTACCAACTA+AGG 0.391755 1_3:+59858014 Msa0129770:CDS
ATATGATCGGAGCTCGTGTC+TGG 0.392875 1_3:-59856672 None:intergenic
TAAAATGCCTTGCTGTTTCT+GGG 0.393871 1_3:+59860945 Msa0129770:CDS
CTAAATATCTGACCTGTGAT+TGG 0.400235 1_3:-59857269 None:intergenic
CTGTAAATGCTCATCTTTCG+TGG 0.409580 1_3:-59859082 None:intergenic
CTTGATGCAGGTCTGGGCAT+TGG 0.410710 1_3:+59861749 Msa0129770:intron
ATTCAAGAGTGGTTTGGAAC+AGG 0.411755 1_3:+59857338 Msa0129770:CDS
GAATTAGATTTGAGCTCAAA+TGG 0.414070 1_3:+59860062 Msa0129770:CDS
ATTGGACATGTCACTTCCTC+AGG 0.414180 1_3:+59859196 Msa0129770:CDS
AAAGCTATTCAAGAGTGGTT+TGG 0.415056 1_3:+59857332 Msa0129770:CDS
GTCATCGGCGGCTCCGCAAT+TGG 0.415080 1_3:-59855771 None:intergenic
ATGAATTTGAAGGGAGTGTA+TGG 0.415392 1_3:-59861271 None:intergenic
TAGGAGGGGATGAATATAAT+AGG 0.415412 1_3:+59858179 Msa0129770:CDS
GCTGGATTGCTGAAGATTGC+AGG 0.415549 1_3:+59859235 Msa0129770:CDS
TGTGGAGTTTCTATCAGAAC+TGG 0.420355 1_3:+59858414 Msa0129770:CDS
TATAGATGTTTATGACGTTA+AGG 0.420441 1_3:+59860722 Msa0129770:CDS
AAATTCATATTTATCAGCTT+GGG 0.420759 1_3:+59855326 Msa0129770:CDS
ACATCCCTTACACCAGTATC+AGG 0.422131 1_3:-59859600 None:intergenic
CACAAAAGTATGGAAATTAC+AGG 0.422298 1_3:-59858283 None:intergenic
GAGTTGTATTTATCATTCTC+TGG 0.423822 1_3:+59855395 Msa0129770:CDS
ATGTACATCAGAAAACTTGC+AGG 0.424893 1_3:+59857721 Msa0129770:CDS
TATCCTATTTATGGAAATTG+AGG 0.425248 1_3:+59855361 Msa0129770:CDS
CTCTTTACTCTACCTGATAC+TGG 0.425742 1_3:+59859588 Msa0129770:CDS
ACACTCTGACAATGATTTCA+TGG 0.427684 1_3:+59859303 Msa0129770:CDS
CCACATATGAGTTCAATTGT+AGG 0.430162 1_3:+59855489 Msa0129770:CDS
GATCCTGTCACCCTTGAAAC+AGG 0.432846 1_3:+59857293 Msa0129770:CDS
TAAACTCTACAGTTCTTCCT+TGG 0.433043 1_3:+59860321 Msa0129770:CDS
TTTGCATTATCTGAATGGTC+AGG 0.435526 1_3:+59860097 Msa0129770:CDS
AATTACAGGTCTCCTTCCTT+CGG 0.436013 1_3:-59858269 None:intergenic
TGGCCTGTTTCAAGGGTGAC+AGG 0.436085 1_3:-59857296 None:intergenic
TTGCATGCAACACAAAAGTA+TGG 0.436934 1_3:-59858293 None:intergenic
CCATGAAATCTTGGCAGAAA+AGG 0.437863 1_3:+59859439 Msa0129770:CDS
CTCTACCTGATACTGGTGTA+AGG 0.438722 1_3:+59859595 Msa0129770:CDS
CAGAACTGGTTCGATTGAAT+AGG 0.442707 1_3:+59858428 Msa0129770:CDS
GATAGAGCCTGTCGCGTGAT+GGG 0.443199 1_3:-59857374 None:intergenic
TGAAGAGATTGAAGACGGTT+CGG 0.446459 1_3:+59856362 Msa0129770:CDS
TTCAAATTCCAACCATTCAA+AGG 0.449806 1_3:+59856190 Msa0129770:CDS
TATGCTACTTAAGAATGGTT+TGG 0.451339 1_3:+59857982 Msa0129770:CDS
AAACTGTACTGTGGTTGCTC+TGG 0.452022 1_3:+59860971 Msa0129770:CDS
TCTATACATTTAATCCCGTC+AGG 0.454522 1_3:-59860705 None:intergenic
AATAATATTAAGAGGAAGAA+TGG 0.454554 1_3:+59856942 Msa0129770:CDS
TATCTGTAATATATGGTTGC+TGG 0.456041 1_3:-59858847 None:intergenic
GTACTTTGCAATCATGAAAA+CGG 0.458104 1_3:+59859471 Msa0129770:CDS
AGCGTGAAATAATTCAAGAA+TGG 0.458442 1_3:-59858365 None:intergenic
CTTGCCTTGTTCTTGCCACA+TGG 0.460182 1_3:+59859553 Msa0129770:CDS
TCAAATTCCAACCATTCAAA+GGG 0.460816 1_3:+59856191 Msa0129770:CDS
CAGTATTAGCAAATTTGGAT+TGG 0.460918 1_3:+59855172 Msa0129770:CDS
TTCTCCCAATATATCTCCTA+TGG 0.461595 1_3:+59856515 Msa0129770:CDS
GTGGTGGGATCGCTATCAAC+TGG 0.461808 1_3:+59861443 Msa0129770:CDS
AAGTCTTTCATTAGTGATCC+AGG 0.462345 1_3:+59859711 Msa0129770:CDS
GGGAAGTCATATACTGAAGC+TGG 0.464073 1_3:+59859217 Msa0129770:CDS
TGAAGAGATTGATAGTATCA+TGG 0.466397 1_3:+59857429 Msa0129770:CDS
TTGGCTATGCTACTTAAGAA+TGG 0.467717 1_3:+59857977 Msa0129770:CDS
ACTAAACCACTTACGACTGT+TGG 0.469402 1_3:-59857827 None:intergenic
CTCCTTTGCATGAGTTGAGC+CGG 0.475743 1_3:+59855793 Msa0129770:CDS
GATAGAAGCACTTTGGCAAA+AGG 0.476174 1_3:+59859126 Msa0129770:CDS
GCAAATCATCATGAATTTGA+AGG 0.476764 1_3:-59861281 None:intergenic
ATAGTCTGGTGCTGAATGAC+AGG 0.477864 1_3:+59857000 Msa0129770:CDS
GGACTGTGAACAAGCTGTAT+TGG 0.480205 1_3:+59857742 Msa0129770:CDS
TCAAAGCCAACAGTCGTAAG+TGG 0.482431 1_3:+59857821 Msa0129770:CDS
ACAGCAATTTGATGTTCCAT+TGG 0.487029 1_3:-59858930 None:intergenic
CTTCCTTGGACAAAACAATC+CGG 0.487637 1_3:+59860335 Msa0129770:CDS
ACTTTCCTCCAAAATGGTGG+TGG 0.487837 1_3:+59861427 Msa0129770:CDS
CACATATGAGTTCAATTGTA+GGG 0.488064 1_3:+59855490 Msa0129770:CDS
CATGAAATCTTGGCAGAAAA+GGG 0.490380 1_3:+59859440 Msa0129770:CDS
AGGTCTTGAATAATATTAAG+AGG 0.492814 1_3:+59856934 Msa0129770:intron
TCATTGTCTTGATTAATGCT+TGG 0.493410 1_3:-59856975 None:intergenic
GGATAGAGCCTGTCGCGTGA+TGG 0.493815 1_3:-59857375 None:intergenic
ACTGGTACAAGAAAATTGTT+GGG 0.494821 1_3:+59861240 Msa0129770:CDS
TTTGTTGAAATTGATGAACT+TGG 0.496701 1_3:-59860918 None:intergenic
GATTCCATAGGAGATATATT+GGG 0.498157 1_3:-59856519 None:intergenic
TCACATTGTGAAAGTGAAGA+TGG 0.498391 1_3:+59857170 Msa0129770:CDS
ACTTCAAAGCTAGGGATGCT+AGG 0.498977 1_3:-59859692 None:intergenic
AACATGCCCCATCACGCGAC+AGG 0.499012 1_3:+59857367 Msa0129770:CDS
ATAGGTTTGGCCTGTTTCAA+GGG 0.499958 1_3:-59857303 None:intergenic
CAATGATTTCATGGAAACAA+TGG 0.500097 1_3:+59859312 Msa0129770:CDS
GAGAGATTAGCAGCTGAAGA+TGG 0.502192 1_3:+59855108 Msa0129770:CDS
CTTCTCAAATAATCAAATGA+AGG 0.504971 1_3:+59859150 Msa0129770:CDS
TCAAGACAATGAGAATAGTC+TGG 0.505266 1_3:+59856986 Msa0129770:CDS
GCGTGAAATAATTCAAGAAT+GGG 0.505300 1_3:-59858364 None:intergenic
GATGATTTGCTCTTTGCTTG+TGG 0.505860 1_3:+59861294 Msa0129770:CDS
CCTCCAGTCATCCAAGAACC+TGG 0.506894 1_3:+59859659 Msa0129770:CDS
CATTCATAAGTGCCTCAAGC+AGG 0.507004 1_3:-59859635 None:intergenic
AATTTGCTCAAGAATTGCTA+TGG 0.507495 1_3:-59858152 None:intergenic
TTCCTCTGATGGAAAGATCC+AGG 0.508947 1_3:+59861646 Msa0129770:CDS
AACAGCTTTCTTGTGCTCGC+GGG 0.510576 1_3:-59860275 None:intergenic
ACATCAACTTCATTCTTCAC+TGG 0.512157 1_3:+59861222 Msa0129770:CDS
ATAGAAAATCCAGAACTCTT+GGG 0.512359 1_3:-59855852 None:intergenic
GTAAATAAGTAGTGCAGCCT+CGG 0.512464 1_3:-59858005 None:intergenic
AAAGAGTAACTCCTTAAAGA+TGG 0.513303 1_3:+59859524 Msa0129770:CDS
GGCTCCGCAATTGGCAACAT+AGG 0.522919 1_3:-59855762 None:intergenic
CAGATTCATGATGGATCAGA+AGG 0.523482 1_3:+59854990 Msa0129770:CDS
GGAGAGACATAAGCTTATGA+TGG 0.524695 1_3:+59855524 Msa0129770:CDS
GTCAGAGTGTCCCAATTGCT+CGG 0.527142 1_3:-59859290 None:intergenic
TGTTCCTATGTTGCCAATTG+CGG 0.527801 1_3:+59855758 Msa0129770:CDS
TAATGAAAGACTTCAAAGCT+AGG 0.529026 1_3:-59859701 None:intergenic
GCTTGCGATAACACACTAGT+TGG 0.529087 1_3:-59857650 None:intergenic
ATATCTTCAGATGGCTCCAA+TGG 0.531000 1_3:+59858914 Msa0129770:CDS
TTCCTTGGACAAAACAATCC+GGG 0.531947 1_3:+59860336 Msa0129770:CDS
ATCAAGTTGAAGAAGAAGAC+TGG 0.532198 1_3:-59858955 None:intergenic
AGGGAATTTCAGATTCATGA+TGG 0.533562 1_3:+59854981 Msa0129770:CDS
CTCAAATTCTAACACACCAA+GGG 0.534009 1_3:+59857484 Msa0129770:CDS
TTAATGAAGGCCGAGCAATT+GGG 0.534398 1_3:+59859280 Msa0129770:CDS
GCTCTTCTTGGAGATTCCAT+AGG 0.538084 1_3:-59856531 None:intergenic
AAATTTGGATTGGGGCATTG+AGG 0.538502 1_3:+59855182 Msa0129770:CDS
TCAAGTGTTATCTCAGCAAA+CGG 0.542313 1_3:+59858214 Msa0129770:CDS
AAACTTAAATTCTGTTGATG+TGG 0.542595 1_3:+59859921 Msa0129770:CDS
TCGTCTTTGTACTTCTGACT+TGG 0.543927 1_3:-59857575 None:intergenic
TCTTCTATTGATGCAACCGC+AGG 0.544570 1_3:+59861318 Msa0129770:CDS
GTTGCTTCCATCAAAATGGC+TGG 0.546096 1_3:+59861563 Msa0129770:CDS
AACTCATGCAAAGGAGTCAT+CGG 0.547287 1_3:-59855786 None:intergenic
GTCTGGACAATTAAACCTGA+CGG 0.549630 1_3:+59860690 Msa0129770:CDS
GGAAATAGCAAGATTGTGGA+AGG 0.549642 1_3:+59857763 Msa0129770:CDS
ATTTCTTGTATATCTTCAGA+TGG 0.549819 1_3:+59858905 Msa0129770:CDS
ACATACCATAACTTCTTCAT+CGG 0.552363 1_3:-59856703 None:intergenic
ATCATCACTATGGTGTGCTA+AGG 0.553923 1_3:+59856220 Msa0129770:CDS
ACTTGTGATGTAAGGTGTCA+AGG 0.556820 1_3:-59857696 None:intergenic
TTACAGATAATCAAGGATGA+AGG 0.557831 1_3:+59858861 Msa0129770:CDS
ACTTAAGAATGGTTTGGCCG+AGG 0.558171 1_3:+59857988 Msa0129770:CDS
CCTACAATTGAACTCATATG+TGG 0.558907 1_3:-59855489 None:intergenic
TTGAGTGCATAGCTCTAACC+TGG 0.559477 1_3:-59855913 None:intergenic
TTCACTTTCCTCCAAAATGG+TGG 0.559620 1_3:+59861424 Msa0129770:CDS
TTGTTGAAATTGATGAACTT+GGG 0.560378 1_3:-59860917 None:intergenic
TATTGGAAATAGCAAGATTG+TGG 0.564189 1_3:+59857759 Msa0129770:CDS
TATTGATGCAACCGCAGGAA+AGG 0.565080 1_3:+59861323 Msa0129770:CDS
CCATATATTACAGATAATCA+AGG 0.565834 1_3:+59858854 Msa0129770:CDS
GCTGGAAACGATAGCGTGAG+AGG 0.568164 1_3:+59858385 Msa0129770:CDS
TCATTAGCGTCAGACGCTGA+TGG 0.570165 1_3:+59861605 Msa0129770:CDS
CAAATCATCATGAATTTGAA+GGG 0.570384 1_3:-59861280 None:intergenic
AATTGTAGGGTGGTATTCAG+AGG 0.570651 1_3:+59855503 Msa0129770:CDS
TAACAGCTTTCTTGTGCTCG+CGG 0.570876 1_3:-59860276 None:intergenic
CTTTCCTCCAAAATGGTGGT+GGG 0.574925 1_3:+59861428 Msa0129770:CDS
GTACATAGACTTGTGATGTA+AGG 0.575384 1_3:-59857704 None:intergenic
GTCTTGAGTGGACATGCTGA+TGG 0.575944 1_3:+59860119 Msa0129770:CDS
AATGAAAGACTTCAAAGCTA+GGG 0.578058 1_3:-59859700 None:intergenic
GATAAATAAGAATGAATCTG+AGG 0.578842 1_3:-59857800 None:intergenic
ACATGCTGATGGAACTATCA+AGG 0.580912 1_3:+59860130 Msa0129770:CDS
GTATTAGCAAATTTGGATTG+GGG 0.586875 1_3:+59855174 Msa0129770:CDS
CTGGATCACTTGGATAAGAG+AGG 0.587625 1_3:-59858074 None:intergenic
CTGGTGTAAGGGATGTTGCT+CGG 0.587806 1_3:+59859607 Msa0129770:CDS
AGGAACAACCTTCTTGCTTG+AGG 0.589226 1_3:-59855742 None:intergenic
ATAGAGCCTGTCGCGTGATG+GGG 0.589928 1_3:-59857373 None:intergenic
TCTACCTGATACTGGTGTAA+GGG 0.593881 1_3:+59859596 Msa0129770:CDS
TCTGGACAATTAAACCTGAC+GGG 0.595986 1_3:+59860691 Msa0129770:CDS
AAAGAAAAGCTATTCAAGAG+TGG 0.596407 1_3:+59857327 Msa0129770:CDS
TGATTCTACCTCAAGCAAGA+AGG 0.597957 1_3:+59855734 Msa0129770:CDS
ATAATTGAAGAGATTGAAGA+CGG 0.598745 1_3:+59856357 Msa0129770:CDS
ATTCTTGAATTATTTCACGC+TGG 0.599666 1_3:+59858367 Msa0129770:CDS
CTGAATGGTCAGGTCTTGAG+TGG 0.600568 1_3:+59860107 Msa0129770:CDS
CCTCCTAGGTATGGGACGCA+AGG 0.602072 1_3:+59860224 Msa0129770:intron
ATCGGCAGTGAAAATATGAT+CGG 0.602880 1_3:-59856685 None:intergenic
CTACAAATCCTCATATCCGT+AGG 0.604451 1_3:+59856568 Msa0129770:CDS
CGCAAGGAAGAGAATACCAC+GGG 0.605071 1_3:+59860240 Msa0129770:CDS
GACCGGCTCAACTCATGCAA+AGG 0.605362 1_3:-59855795 None:intergenic
AAGTATTTGGACAAAACCGA+AGG 0.608674 1_3:+59858253 Msa0129770:CDS
AGACACTGATAGAAGCACTT+TGG 0.610151 1_3:+59859119 Msa0129770:CDS
ACAACAAGAAGACCTAATGA+TGG 0.611307 1_3:+59855876 Msa0129770:CDS
TCTTGCTTGAGGTAGAATCA+GGG 0.611423 1_3:-59855731 None:intergenic
TCAGCCATGTGGCAAGAACA+AGG 0.613423 1_3:-59859557 None:intergenic
ATTTGGACAAAACCGAAGGA+AGG 0.616469 1_3:+59858257 Msa0129770:CDS
TGCTCGGAAATCCCTGCTTG+AGG 0.617396 1_3:+59859623 Msa0129770:CDS
CTATTCTATAGACAGAGTTG+TGG 0.619395 1_3:+59860021 Msa0129770:intron
AACCTGGATCTTTCCATCAG+AGG 0.619691 1_3:-59861648 None:intergenic
TCTCAAATTCTAACACACCA+AGG 0.619752 1_3:+59857483 Msa0129770:CDS
GGAGAACATGAAGAACCCCT+TGG 0.621224 1_3:-59857500 None:intergenic
AGATTTGAGCTCAAATGGAG+AGG 0.624477 1_3:+59860067 Msa0129770:CDS
AAAGCATCTATAGAATCTTG+AGG 0.624596 1_3:+59859848 Msa0129770:CDS
TTGGACATGTCACTTCCTCA+GGG 0.625627 1_3:+59859197 Msa0129770:CDS
CGGGTTTCTTGAATCACCCG+TGG 0.628772 1_3:-59860256 None:intergenic
ACGAAAGATGAGCATTTACA+GGG 0.629231 1_3:+59859084 Msa0129770:CDS
TGGATCACTTGGATAAGAGA+GGG 0.629927 1_3:-59858073 None:intergenic
ATTCATAAGTGCCTCAAGCA+GGG 0.633856 1_3:-59859634 None:intergenic
CCAGGTTCTTGGATGACTGG+AGG 0.637465 1_3:-59859659 None:intergenic
AGATGTTTATGACGTTAAGG+AGG 0.640877 1_3:+59860725 Msa0129770:CDS
TGAGCATTATGATGCATCTG+TGG 0.642057 1_3:+59856389 Msa0129770:CDS
AAGACGATTATATTAGACAA+AGG 0.643398 1_3:+59857591 Msa0129770:CDS
TCAAATTCTAACACACCAAG+GGG 0.644286 1_3:+59857485 Msa0129770:CDS
TTACAAAATCAGGAACAGAC+CGG 0.646189 1_3:-59855812 None:intergenic
TCTGGGGACAAACTGTACTG+TGG 0.649171 1_3:+59860962 Msa0129770:CDS
AAGGAACAACAGATTTACGA+GGG 0.652969 1_3:+59857610 Msa0129770:CDS
ATGGTTTAAATGAAACAACC+AGG 0.654361 1_3:+59855895 Msa0129770:CDS
AGATTTACGAGGGTTTCTGT+CGG 0.656004 1_3:+59857620 Msa0129770:CDS
AAAATGCCTTGCTGTTTCTG+GGG 0.657219 1_3:+59860946 Msa0129770:CDS
TTGCTCAAGAATTGCTATGG+CGG 0.661876 1_3:-59858149 None:intergenic
CACTGTTGATGGCTACACGA+TGG 0.664596 1_3:-59861475 None:intergenic
AAATTCCAACCATTCAAAGG+GGG 0.666255 1_3:+59856193 Msa0129770:CDS
AGTCATTAGATGAGAACACA+AGG 0.670806 1_3:+59855676 Msa0129770:CDS
GTTTGTCCCCAGAAACAGCA+AGG 0.671971 1_3:-59860952 None:intergenic
AGTGATCCAGAATAAAAGTG+AGG 0.673318 1_3:+59858087 Msa0129770:CDS
GCTTCCATCAAAATGGCTGG+TGG 0.681093 1_3:+59861566 Msa0129770:CDS
CAAATTCCAACCATTCAAAG+GGG 0.681835 1_3:+59856192 Msa0129770:CDS
ATATGAGTTCAATTGTAGGG+TGG 0.696022 1_3:+59855493 Msa0129770:CDS
AAAGGAACAACAGATTTACG+AGG 0.699114 1_3:+59857609 Msa0129770:CDS
TCATGCAAAGGAGTCATCGG+CGG 0.699881 1_3:-59855783 None:intergenic
ACAGACATATACCTTTCCTG+CGG 0.724473 1_3:-59861334 None:intergenic
AAACACCGACAAAGAAACTG+AGG 0.730795 1_3:+59855131 Msa0129770:CDS
ACGCAAGGAAGAGAATACCA+CGG 0.733007 1_3:+59860239 Msa0129770:CDS
CCAGTCATCCAAGAACCTGG+AGG 0.734932 1_3:+59859662 Msa0129770:CDS
TTCAGTATATGACTTCCCTG+AGG 0.736161 1_3:-59859212 None:intergenic
CTCTGCAAAAGACATCACAA+TGG 0.738618 1_3:+59857523 Msa0129770:CDS
TAGCGTGAGAGGAATCTGTG+TGG 0.750564 1_3:+59858396 Msa0129770:CDS
GAGCATGTGTGTCAGCCATG+TGG 0.767864 1_3:-59859568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATAACTTTTGATTAA+TGG + chr1_3:59856278-59856297 Msa0129770:intron 10.0%
!!! AAAAAAAAAGTATATGTATA+TGG - chr1_3:59856806-59856825 None:intergenic 10.0%
!!! ATATATTTTTTTGTGAAAAA+TGG - chr1_3:59858657-59858676 None:intergenic 10.0%
!! AAAAACAAAAATACTAAAAT+TGG - chr1_3:59858806-59858825 None:intergenic 10.0%
!!! AGATATTCTTTTTATATTCT+AGG + chr1_3:59857045-59857064 Msa0129770:intron 15.0%
!! AAAAAATATATCGTATTAGA+TGG + chr1_3:59858666-59858685 Msa0129770:intron 15.0%
!! AAAAATATATCGTATTAGAT+GGG + chr1_3:59858667-59858686 Msa0129770:intron 15.0%
!! CGTATAATATATTTATGTTT+AGG + chr1_3:59859978-59859997 Msa0129770:intron 15.0%
!!! TTATCAATTTTATCTTATGA+TGG - chr1_3:59860860-59860879 None:intergenic 15.0%
!! AGCTATTAATACCTATAATA+TGG + chr1_3:59855215-59855234 Msa0129770:CDS 20.0%
!! AAATTCATATTTATCAGCTT+GGG + chr1_3:59855326-59855345 Msa0129770:CDS 20.0%
!! ATTTGAATCTATCCTATTTA+TGG + chr1_3:59855352-59855371 Msa0129770:CDS 20.0%
!!! AAAAAGAATCAAAGTTTTTG+CGG + chr1_3:59856592-59856611 Msa0129770:CDS 20.0%
!! AATAATATTAAGAGGAAGAA+TGG + chr1_3:59856942-59856961 Msa0129770:CDS 20.0%
!!! ATAGTCAGTTTTTCTAATTT+TGG - chr1_3:59857218-59857237 None:intergenic 20.0%
!! AAATTAGAAAAACTGACTAT+TGG + chr1_3:59857218-59857237 Msa0129770:CDS 20.0%
!!! TTCAAAACATAGTTTGTTTT+TGG - chr1_3:59857413-59857432 None:intergenic 20.0%
!!! ATTCTTGAGCAAATTTTAAT+AGG + chr1_3:59858160-59858179 Msa0129770:CDS 20.0%
!! TTCTCAAATGAATGATAATA+TGG - chr1_3:59858583-59858602 None:intergenic 20.0%
!! TGCTTAATAGGAAAATATTT+AGG - chr1_3:59858732-59858751 None:intergenic 20.0%
!!! TACTTTTTTTCTTAACATGT+GGG - chr1_3:59858758-59858777 None:intergenic 20.0%
!! AAAAATACTAAAATTGGTGT+TGG - chr1_3:59858800-59858819 None:intergenic 20.0%
!!! GTTTTTTATGATTATACAGA+AGG + chr1_3:59858820-59858839 Msa0129770:intron 20.0%
!! AACAATAAATTCATCTAACA+AGG - chr1_3:59858992-59859011 None:intergenic 20.0%
!! CAAGAACAAAAAATATATTG+AGG - chr1_3:59859043-59859062 None:intergenic 20.0%
!!! AATACAAACTTTTCTTACAT+AGG + chr1_3:59859401-59859420 Msa0129770:intron 20.0%
!! TACTAGATGTAAACATTATA+CGG + chr1_3:59859745-59859764 Msa0129770:intron 20.0%
!!! AACAGAATTTAAGTTTAGTA+AGG - chr1_3:59859917-59859936 None:intergenic 20.0%
!! CAAATAATAGCAACATTAAT+TGG - chr1_3:59860416-59860435 None:intergenic 20.0%
!!! ATTAATGTTGCTATTATTTG+AGG + chr1_3:59860416-59860435 Msa0129770:intron 20.0%
!! TACCAGAATAAACATATAAA+TGG + chr1_3:59860470-59860489 Msa0129770:intron 20.0%
!! TGTATTAAGATTAATCTAGT+GGG - chr1_3:59860634-59860653 None:intergenic 20.0%
!! ATGTATTAAGATTAATCTAG+TGG - chr1_3:59860635-59860654 None:intergenic 20.0%
!! AATAAATGAAGCAATATAGA+GGG - chr1_3:59861018-59861037 None:intergenic 20.0%
!! TAATAAATGAAGCAATATAG+AGG - chr1_3:59861019-59861038 None:intergenic 20.0%
!! AGAGTTGTATATTATGAAAA+CGG - chr1_3:59861110-59861129 None:intergenic 20.0%
!! AAATATCTTGTATCAATTGA+AGG - chr1_3:59861405-59861424 None:intergenic 20.0%
! TAGATAGTTTCATTCAAGAT+AGG + chr1_3:59855040-59855059 Msa0129770:CDS 25.0%
! AGTATTAGCAAATTTGGATT+GGG + chr1_3:59855173-59855192 Msa0129770:CDS 25.0%
! AAGCTTAGTTTCCATATTAT+AGG - chr1_3:59855229-59855248 None:intergenic 25.0%
! CAAGCTGATAAATATGAATT+TGG - chr1_3:59855327-59855346 None:intergenic 25.0%
! CAAATTCATATTTATCAGCT+TGG + chr1_3:59855325-59855344 Msa0129770:CDS 25.0%
! TATCCTATTTATGGAAATTG+AGG + chr1_3:59855361-59855380 Msa0129770:CDS 25.0%
! AAATCAATCCTAGAGAAAAA+AGG - chr1_3:59855438-59855457 None:intergenic 25.0%
! TAAGAAAAATCAGAAGATTC+AGG - chr1_3:59855558-59855577 None:intergenic 25.0%
!! TAAAGTTTTCAATGAGTCTT+TGG + chr1_3:59855593-59855612 Msa0129770:CDS 25.0%
! GTTTCATTTAAACCATCATT+AGG - chr1_3:59855891-59855910 None:intergenic 25.0%
! TATGATAAATTACCTTATGC+AGG + chr1_3:59856329-59856348 Msa0129770:intron 25.0%
! ATAATTGAAGAGATTGAAGA+CGG + chr1_3:59856357-59856376 Msa0129770:CDS 25.0%
!! TTGATATTTTTCTTCGATTC+AGG - chr1_3:59856441-59856460 None:intergenic 25.0%
! TGAATCGAAGAAAAATATCA+AGG + chr1_3:59856440-59856459 Msa0129770:CDS 25.0%
!! GAGAATTCATTTGATTCTTT+TGG - chr1_3:59856500-59856519 None:intergenic 25.0%
!!! ACTTTGATTCTTTTTTCCTA+CGG - chr1_3:59856587-59856606 None:intergenic 25.0%
!! GTTACTATCTAATCGTTTTA+CGG + chr1_3:59856614-59856633 Msa0129770:CDS 25.0%
!! TTACTATCTAATCGTTTTAC+GGG + chr1_3:59856615-59856634 Msa0129770:CDS 25.0%
! CCTATTATTTATTACTAGTC+CGG + chr1_3:59856745-59856764 Msa0129770:intron 25.0%
! TGTTTGCTTATATTTAAGTC+CGG - chr1_3:59856767-59856786 None:intergenic 25.0%
!!! TATTACTCGTAGCTTTTTTA+TGG + chr1_3:59856854-59856873 Msa0129770:intron 25.0%
! TCAACTATGTAACAGTTATT+TGG + chr1_3:59856906-59856925 Msa0129770:intron 25.0%
! CAACTATGTAACAGTTATTT+GGG + chr1_3:59856907-59856926 Msa0129770:intron 25.0%
! AGGTCTTGAATAATATTAAG+AGG + chr1_3:59856934-59856953 Msa0129770:intron 25.0%
!! ATTGGACAAACAAAATCTTT+TGG - chr1_3:59857254-59857273 None:intergenic 25.0%
!! TTGAATAGCTTTTCTTTCAT+AGG - chr1_3:59857324-59857343 None:intergenic 25.0%
! AAGACGATTATATTAGACAA+AGG + chr1_3:59857591-59857610 Msa0129770:CDS 25.0%
! GATAAATAAGAATGAATCTG+AGG - chr1_3:59857803-59857822 None:intergenic 25.0%
!!! TTGAGCAAATTTTAATAGGA+GGG + chr1_3:59858164-59858183 Msa0129770:CDS 25.0%
! TTTGTCCAAATACTTAACTA+TGG - chr1_3:59858248-59858267 None:intergenic 25.0%
! AAATGACTGCTTTAATTGAA+GGG - chr1_3:59858482-59858501 None:intergenic 25.0%
! TAAATGACTGCTTTAATTGA+AGG - chr1_3:59858483-59858502 None:intergenic 25.0%
!! TTTCACCTTGTTCAATATTT+TGG + chr1_3:59858512-59858531 Msa0129770:intron 25.0%
! TATCTCCAAAATATTGAACA+AGG - chr1_3:59858520-59858539 None:intergenic 25.0%
!! CAAAAAGTTAGCATTGAATT+TGG - chr1_3:59858547-59858566 None:intergenic 25.0%
!! CCATTTTACTGTAAACATAA+AGG - chr1_3:59858612-59858631 None:intergenic 25.0%
! CCTTTATGTTTACAGTAAAA+TGG + chr1_3:59858609-59858628 Msa0129770:intron 25.0%
!!! ACTTTTTTTCTTAACATGTG+GGG - chr1_3:59858757-59858776 None:intergenic 25.0%
!!! GTACTTTTTTTCTTAACATG+TGG - chr1_3:59858759-59858778 None:intergenic 25.0%
! CCTTGATTATCTGTAATATA+TGG - chr1_3:59858857-59858876 None:intergenic 25.0%
! CCATATATTACAGATAATCA+AGG + chr1_3:59858854-59858873 Msa0129770:CDS 25.0%
! ATTTCTTGTATATCTTCAGA+TGG + chr1_3:59858905-59858924 Msa0129770:CDS 25.0%
! CTTCTCAAATAATCAAATGA+AGG + chr1_3:59859150-59859169 Msa0129770:CDS 25.0%
!! GATGCTTTACTATTTCTTAT+TGG + chr1_3:59859178-59859197 Msa0129770:CDS 25.0%
!!! ACCTTACAATGTTTTAATGA+AGG + chr1_3:59859267-59859286 Msa0129770:CDS 25.0%
! ACTAGATGTAAACATTATAC+GGG + chr1_3:59859746-59859765 Msa0129770:intron 25.0%
! GAGTACACTAAATGAAAAAA+TGG + chr1_3:59859785-59859804 Msa0129770:intron 25.0%
! AAACTTAAATTCTGTTGATG+TGG + chr1_3:59859921-59859940 Msa0129770:CDS 25.0%
! TGCTATGTCATAGAAAAAAT+TGG + chr1_3:59860369-59860388 Msa0129770:intron 25.0%
! AGCCATTTATATGTTTATTC+TGG - chr1_3:59860475-59860494 None:intergenic 25.0%
!!! ACGTAAGAAGTATTATTCAA+TGG - chr1_3:59860666-59860685 None:intergenic 25.0%
! TATAGATGTTTATGACGTTA+AGG + chr1_3:59860722-59860741 Msa0129770:CDS 25.0%
! TGATAAAATTTGACGTTTAC+AGG + chr1_3:59860874-59860893 Msa0129770:intron 25.0%
! TTGTTGAAATTGATGAACTT+GGG - chr1_3:59860920-59860939 None:intergenic 25.0%
! TTTGTTGAAATTGATGAACT+TGG - chr1_3:59860921-59860940 None:intergenic 25.0%
!!! CTATGTTTTTTAAGACTTAC+CGG + chr1_3:59861164-59861183 Msa0129770:intron 25.0%
!!! GAATGAAGTTGATGTATATT+TGG - chr1_3:59861217-59861236 None:intergenic 25.0%
! CAAATCATCATGAATTTGAA+GGG - chr1_3:59861283-59861302 None:intergenic 25.0%
TCAAGCAGTATTAGCAAATT+TGG + chr1_3:59855167-59855186 Msa0129770:CDS 30.0%
CAGTATTAGCAAATTTGGAT+TGG + chr1_3:59855172-59855191 Msa0129770:CDS 30.0%
GTATTAGCAAATTTGGATTG+GGG + chr1_3:59855174-59855193 Msa0129770:CDS 30.0%
GTTCCTCAATTTCCATAAAT+AGG - chr1_3:59855367-59855386 None:intergenic 30.0%
GAGTTGTATTTATCATTCTC+TGG + chr1_3:59855395-59855414 Msa0129770:CDS 30.0%
!!! TTGTTGATCCTTTTTTCTCT+AGG + chr1_3:59855427-59855446 Msa0129770:CDS 30.0%
! TTGATTTTGCTCCTGAATTA+TGG + chr1_3:59855451-59855470 Msa0129770:CDS 30.0%
! AACAGGTTTTTCCATAATTC+AGG - chr1_3:59855465-59855484 None:intergenic 30.0%
CACATATGAGTTCAATTGTA+GGG + chr1_3:59855490-59855509 Msa0129770:CDS 30.0%
! AGTCTTTGGTATTTTCTATG+AGG + chr1_3:59855607-59855626 Msa0129770:CDS 30.0%
! GTTCCTGATTTTGTAAAGTT+TGG + chr1_3:59855819-59855838 Msa0129770:CDS 30.0%
ATAGAAAATCCAGAACTCTT+GGG - chr1_3:59855855-59855874 None:intergenic 30.0%
ATGGTTTAAATGAAACAACC+AGG + chr1_3:59855895-59855914 Msa0129770:CDS 30.0%
CAAACGTACATACAAGAATT+AGG - chr1_3:59856140-59856159 None:intergenic 30.0%
CTAATTCTTGTATGTACGTT+TGG + chr1_3:59856138-59856157 Msa0129770:intron 30.0%
TTCAAATTCCAACCATTCAA+AGG + chr1_3:59856190-59856209 Msa0129770:CDS 30.0%
TCAAATTCCAACCATTCAAA+GGG + chr1_3:59856191-59856210 Msa0129770:CDS 30.0%
TTAGAGTAGCACATTCATAT+AGG + chr1_3:59856303-59856322 Msa0129770:intron 30.0%
! TGGTTTGATCGATATACTTT+TGG - chr1_3:59856480-59856499 None:intergenic 30.0%
GATTCCATAGGAGATATATT+GGG - chr1_3:59856522-59856541 None:intergenic 30.0%
AGATTCCATAGGAGATATAT+TGG - chr1_3:59856523-59856542 None:intergenic 30.0%
ACATACCATAACTTCTTCAT+CGG - chr1_3:59856706-59856725 None:intergenic 30.0%
!! CCGGACTAGTAATAAATAAT+AGG - chr1_3:59856748-59856767 None:intergenic 30.0%
! GTAACAGTTATTTGGGATAT+AGG + chr1_3:59856914-59856933 Msa0129770:intron 30.0%
TCATTGTCTTGATTAATGCT+TGG - chr1_3:59856978-59856997 None:intergenic 30.0%
ATAGTTCTCATGCTACTATT+TGG + chr1_3:59857077-59857096 Msa0129770:intron 30.0%
TAGTTCTCATGCTACTATTT+GGG + chr1_3:59857078-59857097 Msa0129770:intron 30.0%
! TAGCTTTTCTTTCATAGGTT+TGG - chr1_3:59857319-59857338 None:intergenic 30.0%
AAAGAAAAGCTATTCAAGAG+TGG + chr1_3:59857327-59857346 Msa0129770:CDS 30.0%
!!! TGTTTTTGGTAAGATGTTTG+CGG - chr1_3:59857399-59857418 None:intergenic 30.0%
! TGAAGAGATTGATAGTATCA+TGG + chr1_3:59857429-59857448 Msa0129770:CDS 30.0%
TATTGGAAATAGCAAGATTG+TGG + chr1_3:59857759-59857778 Msa0129770:CDS 30.0%
! ATCTTTTCAGATGAAAGAGT+TGG + chr1_3:59857917-59857936 Msa0129770:CDS 30.0%
! TATGCTACTTAAGAATGGTT+TGG + chr1_3:59857982-59858001 Msa0129770:CDS 30.0%
CACTACTTATTTACCAACTA+AGG + chr1_3:59858014-59858033 Msa0129770:CDS 30.0%
!! CTATATCCTCACTTTTATTC+TGG - chr1_3:59858096-59858115 None:intergenic 30.0%
! AATTTGCTCAAGAATTGCTA+TGG - chr1_3:59858155-59858174 None:intergenic 30.0%
!! CTTGAGCAAATTTTAATAGG+AGG + chr1_3:59858163-59858182 Msa0129770:CDS 30.0%
!! TGAGCAAATTTTAATAGGAG+GGG + chr1_3:59858165-59858184 Msa0129770:CDS 30.0%
! CACAAAAGTATGGAAATTAC+AGG - chr1_3:59858286-59858305 None:intergenic 30.0%
GCGTGAAATAATTCAAGAAT+GGG - chr1_3:59858367-59858386 None:intergenic 30.0%
AGCGTGAAATAATTCAAGAA+TGG - chr1_3:59858368-59858387 None:intergenic 30.0%
ATTCTTGAATTATTTCACGC+TGG + chr1_3:59858367-59858386 Msa0129770:CDS 30.0%
! TTTTCATATCACTCAGCAAT+AGG + chr1_3:59858702-59858721 Msa0129770:intron 30.0%
TATCTGTAATATATGGTTGC+TGG - chr1_3:59858850-59858869 None:intergenic 30.0%
TTACAGATAATCAAGGATGA+AGG + chr1_3:59858861-59858880 Msa0129770:CDS 30.0%
TTGTTCTTGTCAAACTATTC+AGG + chr1_3:59859054-59859073 Msa0129770:intron 30.0%
GCCTTCATTAAAACATTGTA+AGG - chr1_3:59859271-59859290 None:intergenic 30.0%
CAATGATTTCATGGAAACAA+TGG + chr1_3:59859312-59859331 Msa0129770:CDS 30.0%
! ACAAACTTTTCTTACATAGG+AGG + chr1_3:59859404-59859423 Msa0129770:intron 30.0%
AAAAAAACGCCATGAAATCT+TGG + chr1_3:59859430-59859449 Msa0129770:CDS 30.0%
GTACTTTGCAATCATGAAAA+CGG + chr1_3:59859471-59859490 Msa0129770:CDS 30.0%
! TCTTTAAGGAGTTACTCTTT+AGG - chr1_3:59859524-59859543 None:intergenic 30.0%
AAAGAGTAACTCCTTAAAGA+TGG + chr1_3:59859524-59859543 Msa0129770:CDS 30.0%
AATGAAAGACTTCAAAGCTA+GGG - chr1_3:59859703-59859722 None:intergenic 30.0%
TAATGAAAGACTTCAAAGCT+AGG - chr1_3:59859704-59859723 None:intergenic 30.0%
TCTAGTATAAAAAACCTACC+TGG - chr1_3:59859732-59859751 None:intergenic 30.0%
! AAAGCATCTATAGAATCTTG+AGG + chr1_3:59859848-59859867 Msa0129770:CDS 30.0%
GAATTAGATTTGAGCTCAAA+TGG + chr1_3:59860062-59860081 Msa0129770:CDS 30.0%
CTTTCTTTGCATTATCTGAA+TGG + chr1_3:59860092-59860111 Msa0129770:CDS 30.0%
TAACAGTATAAATTCCTCCT+AGG + chr1_3:59860210-59860229 Msa0129770:intron 30.0%
TATAAATTCCTCCTAGGTAT+GGG + chr1_3:59860216-59860235 Msa0129770:intron 30.0%
TGGTATGCACAACAAAATAT+TGG - chr1_3:59860396-59860415 None:intergenic 30.0%
ACAAAAAGATGCAGGTAATT+TGG - chr1_3:59860608-59860627 None:intergenic 30.0%
GAATAATACTTCTTACGTAC+AGG + chr1_3:59860668-59860687 Msa0129770:intron 30.0%
GAATTGTTCAGCAACATATA+AGG - chr1_3:59860821-59860840 None:intergenic 30.0%
ATGTTGCTGAACAATTCATA+AGG + chr1_3:59860824-59860843 Msa0129770:intron 30.0%
! GACGTTTACAGGTTTTTAAT+TGG + chr1_3:59860885-59860904 Msa0129770:intron 30.0%
ATGAAAACGGAAAGAACATA+TGG - chr1_3:59861097-59861116 None:intergenic 30.0%
AAAACATACATAAGCTTCTC+TGG + chr1_3:59861134-59861153 Msa0129770:intron 30.0%
ACTGGTACAAGAAAATTGTT+GGG + chr1_3:59861240-59861259 Msa0129770:CDS 30.0%
GCAAATCATCATGAATTTGA+AGG - chr1_3:59861284-59861303 None:intergenic 30.0%
! ATTTTCACTTTCCTCCAAAA+TGG + chr1_3:59861421-59861440 Msa0129770:CDS 30.0%
AAATATGAAGTCACTGTTGA+TGG - chr1_3:59861489-59861508 None:intergenic 30.0%
! ATATTTGCTGGTACGAAATT+TGG + chr1_3:59861503-59861522 Msa0129770:CDS 30.0%
CAAGAGAAAATTCAGTTACT+GGG - chr1_3:59861725-59861744 None:intergenic 30.0%
AGGGAATTTCAGATTCATGA+TGG + chr1_3:59854981-59855000 Msa0129770:CDS 35.0%
TTCTACCTCAGTTTCTTTGT+CGG - chr1_3:59855139-59855158 None:intergenic 35.0%
AATCCTAAGCAAAAAACTGC+TGG + chr1_3:59855297-59855316 Msa0129770:CDS 35.0%
AACTCATATGTGGAAGAAAC+AGG - chr1_3:59855482-59855501 None:intergenic 35.0%
CCTACAATTGAACTCATATG+TGG - chr1_3:59855492-59855511 None:intergenic 35.0%
CCACATATGAGTTCAATTGT+AGG + chr1_3:59855489-59855508 Msa0129770:CDS 35.0%
ATATGAGTTCAATTGTAGGG+TGG + chr1_3:59855493-59855512 Msa0129770:CDS 35.0%
TGCAATTTCTCAAGCTGATT+TGG - chr1_3:59855633-59855652 None:intergenic 35.0%
CAAAAACTTGAGCAGCTTTA+TGG + chr1_3:59855651-59855670 Msa0129770:CDS 35.0%
AGTCATTAGATGAGAACACA+AGG + chr1_3:59855676-59855695 Msa0129770:CDS 35.0%
TTACAAAATCAGGAACAGAC+CGG - chr1_3:59855815-59855834 None:intergenic 35.0%
GGACCAAACTTTACAAAATC+AGG - chr1_3:59855825-59855844 None:intergenic 35.0%
CATAGAAAATCCAGAACTCT+TGG - chr1_3:59855856-59855875 None:intergenic 35.0%
ACAACAAGAAGACCTAATGA+TGG + chr1_3:59855876-59855895 Msa0129770:CDS 35.0%
GCACTCAAACTTTGAATTCT+TGG + chr1_3:59855928-59855947 Msa0129770:CDS 35.0%
ATGATTCAGTGCCAAAAACT+TGG + chr1_3:59856074-59856093 Msa0129770:intron 35.0%
! ACTTTCTTGAGCCAAGTTTT+TGG - chr1_3:59856088-59856107 None:intergenic 35.0%
ACGTACATACAAGAATTAGG+AGG - chr1_3:59856137-59856156 None:intergenic 35.0%
CAAATTCCAACCATTCAAAG+GGG + chr1_3:59856192-59856211 Msa0129770:CDS 35.0%
AAATTCCAACCATTCAAAGG+GGG + chr1_3:59856193-59856212 Msa0129770:CDS 35.0%
TTCTCCCAATATATCTCCTA+TGG + chr1_3:59856515-59856534 Msa0129770:CDS 35.0%
! GAGTTATTTGAAGCTCTTCT+TGG - chr1_3:59856546-59856565 None:intergenic 35.0%
!!! TCTTTTTTCCTACGGATATG+AGG - chr1_3:59856579-59856598 None:intergenic 35.0%
ATCGGCAGTGAAAATATGAT+CGG - chr1_3:59856688-59856707 None:intergenic 35.0%
AGCAAACAAATGCATGTATC+TGG + chr1_3:59856779-59856798 Msa0129770:intron 35.0%
!!! TTGCTTATTTTGAAGCCTAG+AGG + chr1_3:59856824-59856843 Msa0129770:intron 35.0%
!!! TGCTTATTTTGAAGCCTAGA+GGG + chr1_3:59856825-59856844 Msa0129770:intron 35.0%
!!! ACTCGTAGCTTTTTTATGGT+TGG + chr1_3:59856858-59856877 Msa0129770:intron 35.0%
TCAAGACAATGAGAATAGTC+TGG + chr1_3:59856986-59857005 Msa0129770:CDS 35.0%
GGCAAAGAAAGTTGAACATT+AGG - chr1_3:59857134-59857153 None:intergenic 35.0%
ATGTGAACTGCAAACTCAAA+GGG - chr1_3:59857156-59857175 None:intergenic 35.0%
AATGTGAACTGCAAACTCAA+AGG - chr1_3:59857157-59857176 None:intergenic 35.0%
TCACATTGTGAAAGTGAAGA+TGG + chr1_3:59857170-59857189 Msa0129770:CDS 35.0%
! GGACAAACAAAATCTTTTGG+TGG - chr1_3:59857251-59857270 None:intergenic 35.0%
!! GATTTTGTTTGTCCAATCAC+AGG + chr1_3:59857257-59857276 Msa0129770:CDS 35.0%
CTAAATATCTGACCTGTGAT+TGG - chr1_3:59857272-59857291 None:intergenic 35.0%
AAAGCTATTCAAGAGTGGTT+TGG + chr1_3:59857332-59857351 Msa0129770:CDS 35.0%
TCTCAAATTCTAACACACCA+AGG + chr1_3:59857483-59857502 Msa0129770:CDS 35.0%
CTCAAATTCTAACACACCAA+GGG + chr1_3:59857484-59857503 Msa0129770:CDS 35.0%
TCAAATTCTAACACACCAAG+GGG + chr1_3:59857485-59857504 Msa0129770:CDS 35.0%
! ATTGTGATGTCTTTTGCAGA+GGG - chr1_3:59857524-59857543 None:intergenic 35.0%
AAAGGAACAACAGATTTACG+AGG + chr1_3:59857609-59857628 Msa0129770:CDS 35.0%
AAGGAACAACAGATTTACGA+GGG + chr1_3:59857610-59857629 Msa0129770:CDS 35.0%
GTACATAGACTTGTGATGTA+AGG - chr1_3:59857707-59857726 None:intergenic 35.0%
ATGTACATCAGAAAACTTGC+AGG + chr1_3:59857721-59857740 Msa0129770:CDS 35.0%
AGATTCTGACTTTGATTGCT+TGG + chr1_3:59857958-59857977 Msa0129770:CDS 35.0%
! TTGGCTATGCTACTTAAGAA+TGG + chr1_3:59857977-59857996 Msa0129770:CDS 35.0%
! CACTTTTATTCTGGATCACT+TGG - chr1_3:59858087-59858106 None:intergenic 35.0%
AGTGATCCAGAATAAAAGTG+AGG + chr1_3:59858087-59858106 Msa0129770:CDS 35.0%
TAGGAGGGGATGAATATAAT+AGG + chr1_3:59858179-59858198 Msa0129770:CDS 35.0%
TCAAGTGTTATCTCAGCAAA+CGG + chr1_3:59858214-59858233 Msa0129770:CDS 35.0%
TCCAGCCATAGTTAAGTATT+TGG + chr1_3:59858240-59858259 Msa0129770:CDS 35.0%
TCCAAATACTTAACTATGGC+TGG - chr1_3:59858244-59858263 None:intergenic 35.0%
AAGTATTTGGACAAAACCGA+AGG + chr1_3:59858253-59858272 Msa0129770:CDS 35.0%
TTGCATGCAACACAAAAGTA+TGG - chr1_3:59858296-59858315 None:intergenic 35.0%
ACTGCTTTAATTGAAGGGAA+AGG - chr1_3:59858477-59858496 None:intergenic 35.0%
ACAGCAATTTGATGTTCCAT+TGG - chr1_3:59858933-59858952 None:intergenic 35.0%
ACGAAAGATGAGCATTTACA+GGG + chr1_3:59859084-59859103 Msa0129770:CDS 35.0%
ACACTCTGACAATGATTTCA+TGG + chr1_3:59859303-59859322 Msa0129770:CDS 35.0%
TTCATGGAAACAATGGTTTG+AGG + chr1_3:59859319-59859338 Msa0129770:intron 35.0%
AACAATGGTTTGAGGATATG+TGG + chr1_3:59859327-59859346 Msa0129770:intron 35.0%
CATGAAATCTTGGCAGAAAA+GGG + chr1_3:59859440-59859459 Msa0129770:CDS 35.0%
CGGTTCAATATTTCAAGCTT+TGG + chr1_3:59859491-59859510 Msa0129770:CDS 35.0%
! GCAAGATTTTGCCATCTTTA+AGG - chr1_3:59859538-59859557 None:intergenic 35.0%
AAGTCTTTCATTAGTGATCC+AGG + chr1_3:59859711-59859730 Msa0129770:CDS 35.0%
TACGGGTCTTTATCATACAA+AGG + chr1_3:59859763-59859782 Msa0129770:intron 35.0%
AATTCTGTTGATGTGGTAAG+TGG + chr1_3:59859928-59859947 Msa0129770:intron 35.0%
CTATTCTATAGACAGAGTTG+TGG + chr1_3:59860021-59860040 Msa0129770:intron 35.0%
TTTGCATTATCTGAATGGTC+AGG + chr1_3:59860097-59860116 Msa0129770:CDS 35.0%
GTATAAATTCCTCCTAGGTA+TGG + chr1_3:59860215-59860234 Msa0129770:intron 35.0%
TAAACTCTACAGTTCTTCCT+TGG + chr1_3:59860321-59860340 Msa0129770:CDS 35.0%
! TGCTATTATTTGAGGTGATG+AGG + chr1_3:59860424-59860443 Msa0129770:intron 35.0%
TCTATACATTTAATCCCGTC+AGG - chr1_3:59860708-59860727 None:intergenic 35.0%
AGATGTTTATGACGTTAAGG+AGG + chr1_3:59860725-59860744 Msa0129770:CDS 35.0%
!!! ATAGCATGCCATTTTAGCAT+TGG - chr1_3:59860769-59860788 None:intergenic 35.0%
ATGCTATGTAACTCAAGGAA+CGG + chr1_3:59860782-59860801 Msa0129770:intron 35.0%
!! TAAAATGCCTTGCTGTTTCT+GGG + chr1_3:59860945-59860964 Msa0129770:CDS 35.0%
ATTAGTAGTGTCTTTAGCTG+AGG + chr1_3:59861035-59861054 Msa0129770:intron 35.0%
ACATCAACTTCATTCTTCAC+TGG + chr1_3:59861222-59861241 Msa0129770:CDS 35.0%
CACTGGTACAAGAAAATTGT+TGG + chr1_3:59861239-59861258 Msa0129770:CDS 35.0%
! ATGAATTTGAAGGGAGTGTA+TGG - chr1_3:59861274-59861293 None:intergenic 35.0%
TTCTGCAAGAGAATATGCTT+TGG - chr1_3:59861372-59861391 None:intergenic 35.0%
AACAGTGACTTCATATTTGC+TGG + chr1_3:59861491-59861510 Msa0129770:CDS 35.0%
AATTTGGCACCATTGAAGTT+TGG + chr1_3:59861519-59861538 Msa0129770:CDS 35.0%
! GTCTTTTAGCCAAACTTCAA+TGG - chr1_3:59861531-59861550 None:intergenic 35.0%
!! GATGGAATGATGCTTTTTGT+TGG + chr1_3:59861623-59861642 Msa0129770:CDS 35.0%
!! CTGGTTAGTTTGTGATATCA+TGG - chr1_3:59861695-59861714 None:intergenic 35.0%
CCAAGAGAAAATTCAGTTAC+TGG - chr1_3:59861726-59861745 None:intergenic 35.0%
! CCAGTAACTGAATTTTCTCT+TGG + chr1_3:59861723-59861742 Msa0129770:intron 35.0%
!! CAGATTCATGATGGATCAGA+AGG + chr1_3:59854990-59855009 Msa0129770:CDS 40.0%
AAACACCGACAAAGAAACTG+AGG + chr1_3:59855131-59855150 Msa0129770:CDS 40.0%
!! AAATTTGGATTGGGGCATTG+AGG + chr1_3:59855182-59855201 Msa0129770:CDS 40.0%
!!! ACTCCAGCAGTTTTTTGCTT+AGG - chr1_3:59855303-59855322 None:intergenic 40.0%
AATTGTAGGGTGGTATTCAG+AGG + chr1_3:59855503-59855522 Msa0129770:CDS 40.0%
GGAGAGACATAAGCTTATGA+TGG + chr1_3:59855524-59855543 Msa0129770:CDS 40.0%
TCTTGCTTGAGGTAGAATCA+GGG - chr1_3:59855734-59855753 None:intergenic 40.0%
TTCTTGCTTGAGGTAGAATC+AGG - chr1_3:59855735-59855754 None:intergenic 40.0%
TGATTCTACCTCAAGCAAGA+AGG + chr1_3:59855734-59855753 Msa0129770:CDS 40.0%
TGTTCCTATGTTGCCAATTG+CGG + chr1_3:59855758-59855777 Msa0129770:CDS 40.0%
AACTCATGCAAAGGAGTCAT+CGG - chr1_3:59855789-59855808 None:intergenic 40.0%
CTGTGAGTCTCAATGAACTT+CGG + chr1_3:59855954-59855973 Msa0129770:intron 40.0%
TGTGAGTCTCAATGAACTTC+GGG + chr1_3:59855955-59855974 Msa0129770:intron 40.0%
ATGATTGTTCCCCCTTTGAA+TGG - chr1_3:59856205-59856224 None:intergenic 40.0%
ATCATCACTATGGTGTGCTA+AGG + chr1_3:59856220-59856239 Msa0129770:CDS 40.0%
CAATTATGCTCTCCTGCATA+AGG - chr1_3:59856344-59856363 None:intergenic 40.0%
TGAAGAGATTGAAGACGGTT+CGG + chr1_3:59856362-59856381 Msa0129770:CDS 40.0%
TGAGCATTATGATGCATCTG+TGG + chr1_3:59856389-59856408 Msa0129770:CDS 40.0%
CTACAAATCCTCATATCCGT+AGG + chr1_3:59856568-59856587 Msa0129770:CDS 40.0%
GAGTAATACATACTCCCTCT+AGG - chr1_3:59856842-59856861 None:intergenic 40.0%
!!! CGTAGCTTTTTTATGGTTGG+TGG + chr1_3:59856861-59856880 Msa0129770:intron 40.0%
TGTGAACTGCAAACTCAAAG+GGG - chr1_3:59857155-59857174 None:intergenic 40.0%
ATAGGTTTGGCCTGTTTCAA+GGG - chr1_3:59857306-59857325 None:intergenic 40.0%
! ATTCAAGAGTGGTTTGGAAC+AGG + chr1_3:59857338-59857357 Msa0129770:CDS 40.0%
GAGAATTCTTGAGCTAGTTC+AGG - chr1_3:59857467-59857486 None:intergenic 40.0%
! CATTGTGATGTCTTTTGCAG+AGG - chr1_3:59857525-59857544 None:intergenic 40.0%
CTCTGCAAAAGACATCACAA+TGG + chr1_3:59857523-59857542 Msa0129770:CDS 40.0%
TCGTCTTTGTACTTCTGACT+TGG - chr1_3:59857578-59857597 None:intergenic 40.0%
AGATTTACGAGGGTTTCTGT+CGG + chr1_3:59857620-59857639 Msa0129770:CDS 40.0%
! ACTTGTGATGTAAGGTGTCA+AGG - chr1_3:59857699-59857718 None:intergenic 40.0%
GGAAATAGCAAGATTGTGGA+AGG + chr1_3:59857763-59857782 Msa0129770:CDS 40.0%
ACTAAACCACTTACGACTGT+TGG - chr1_3:59857830-59857849 None:intergenic 40.0%
GTAAATAAGTAGTGCAGCCT+CGG - chr1_3:59858008-59858027 None:intergenic 40.0%
TCTGAAAGCTGAGCAAAAAC+TGG - chr1_3:59858040-59858059 None:intergenic 40.0%
TGGATCACTTGGATAAGAGA+GGG - chr1_3:59858076-59858095 None:intergenic 40.0%
TTGCTCAAGAATTGCTATGG+CGG - chr1_3:59858152-59858171 None:intergenic 40.0%
ATTTGGACAAAACCGAAGGA+AGG + chr1_3:59858257-59858276 Msa0129770:CDS 40.0%
AATTACAGGTCTCCTTCCTT+CGG - chr1_3:59858272-59858291 None:intergenic 40.0%
TGTGGAGTTTCTATCAGAAC+TGG + chr1_3:59858414-59858433 Msa0129770:CDS 40.0%
!! CAGAACTGGTTCGATTGAAT+AGG + chr1_3:59858428-59858447 Msa0129770:CDS 40.0%
!! ACTAAAATTGGTGTTGGACG+AGG - chr1_3:59858794-59858813 None:intergenic 40.0%
ATATCTTCAGATGGCTCCAA+TGG + chr1_3:59858914-59858933 Msa0129770:CDS 40.0%
CTGTAAATGCTCATCTTTCG+TGG - chr1_3:59859085-59859104 None:intergenic 40.0%
CACGAAAGATGAGCATTTAC+AGG + chr1_3:59859083-59859102 Msa0129770:CDS 40.0%
!! AGACACTGATAGAAGCACTT+TGG + chr1_3:59859119-59859138 Msa0129770:CDS 40.0%
!! GATAGAAGCACTTTGGCAAA+AGG + chr1_3:59859126-59859145 Msa0129770:CDS 40.0%
TTCAGTATATGACTTCCCTG+AGG - chr1_3:59859215-59859234 None:intergenic 40.0%
TTTAATGAAGGCCGAGCAAT+TGG + chr1_3:59859279-59859298 Msa0129770:CDS 40.0%
TTAATGAAGGCCGAGCAATT+GGG + chr1_3:59859280-59859299 Msa0129770:CDS 40.0%
! CCTTTTCTGCCAAGATTTCA+TGG - chr1_3:59859442-59859461 None:intergenic 40.0%
CCATGAAATCTTGGCAGAAA+AGG + chr1_3:59859439-59859458 Msa0129770:CDS 40.0%
CTCTTTACTCTACCTGATAC+TGG + chr1_3:59859588-59859607 Msa0129770:CDS 40.0%
TCTACCTGATACTGGTGTAA+GGG + chr1_3:59859596-59859615 Msa0129770:CDS 40.0%
ATTCATAAGTGCCTCAAGCA+GGG - chr1_3:59859637-59859656 None:intergenic 40.0%
CTTTCATTAGTGATCCAGGT+AGG + chr1_3:59859715-59859734 Msa0129770:intron 40.0%
GGTAAGTGGAGTAGTGATTA+AGG + chr1_3:59859942-59859961 Msa0129770:intron 40.0%
AGATTTGAGCTCAAATGGAG+AGG + chr1_3:59860067-59860086 Msa0129770:CDS 40.0%
ACATGCTGATGGAACTATCA+AGG + chr1_3:59860130-59860149 Msa0129770:CDS 40.0%
CCACACAGTTTCTGATTGTT+AGG - chr1_3:59860164-59860183 None:intergenic 40.0%
CCTAACAATCAGAAACTGTG+TGG + chr1_3:59860161-59860180 Msa0129770:intron 40.0%
CTTCCTTGGACAAAACAATC+CGG + chr1_3:59860335-59860354 Msa0129770:CDS 40.0%
TTCCTTGGACAAAACAATCC+GGG + chr1_3:59860336-59860355 Msa0129770:CDS 40.0%
ATACTTCTTACGTACAGGTC+TGG + chr1_3:59860673-59860692 Msa0129770:intron 40.0%
GTCTGGACAATTAAACCTGA+CGG + chr1_3:59860690-59860709 Msa0129770:CDS 40.0%
TCTGGACAATTAAACCTGAC+GGG + chr1_3:59860691-59860710 Msa0129770:CDS 40.0%
ATGGCATGCTATGTAACTCA+AGG + chr1_3:59860777-59860796 Msa0129770:intron 40.0%
TGCTATGTAACTCAAGGAAC+GGG + chr1_3:59860783-59860802 Msa0129770:intron 40.0%
!! GTAAAATGCCTTGCTGTTTC+TGG + chr1_3:59860944-59860963 Msa0129770:CDS 40.0%
!! AAAATGCCTTGCTGTTTCTG+GGG + chr1_3:59860946-59860965 Msa0129770:CDS 40.0%
!! GATGATTTGCTCTTTGCTTG+TGG + chr1_3:59861294-59861313 Msa0129770:CDS 40.0%
ACAGACATATACCTTTCCTG+CGG - chr1_3:59861337-59861356 None:intergenic 40.0%
TTCACTTTCCTCCAAAATGG+TGG + chr1_3:59861424-59861443 Msa0129770:CDS 40.0%
!! CATTTTGATGGAAGCAACTC+GGG - chr1_3:59861561-59861580 None:intergenic 40.0%
!! CCATTTTGATGGAAGCAACT+CGG - chr1_3:59861562-59861581 None:intergenic 40.0%
!!! CTTTTTGTTGGTTCCTCTGA+TGG + chr1_3:59861635-59861654 Msa0129770:CDS 40.0%
ATTATGATCAGTGCCTAACC+TGG - chr1_3:59861667-59861686 None:intergenic 40.0%
TTCTCTTGGATTCTTGATGC+AGG + chr1_3:59861737-59861756 Msa0129770:intron 40.0%
GAGAGATTAGCAGCTGAAGA+TGG + chr1_3:59855108-59855127 Msa0129770:CDS 45.0%
AGGAACAACCTTCTTGCTTG+AGG - chr1_3:59855745-59855764 None:intergenic 45.0%
CCAGAACTCTTGGGCAAAAT+AGG - chr1_3:59855846-59855865 None:intergenic 45.0%
! CCTATTTTGCCCAAGAGTTC+TGG + chr1_3:59855843-59855862 Msa0129770:CDS 45.0%
!! TTGAGTGCATAGCTCTAACC+TGG - chr1_3:59855916-59855935 None:intergenic 45.0%
TTGTTCCCCCTTTGAATGGT+TGG - chr1_3:59856201-59856220 None:intergenic 45.0%
AGGGGGAACAATCATCACTA+TGG + chr1_3:59856210-59856229 Msa0129770:CDS 45.0%
GCTCTTCTTGGAGATTCCAT+AGG - chr1_3:59856534-59856553 None:intergenic 45.0%
CACTGCCGATGAAGAAGTTA+TGG + chr1_3:59856698-59856717 Msa0129770:CDS 45.0%
! ATAGTCTGGTGCTGAATGAC+AGG + chr1_3:59857000-59857019 Msa0129770:CDS 45.0%
CATAGGTTTGGCCTGTTTCA+AGG - chr1_3:59857307-59857326 None:intergenic 45.0%
GCTTGCGATAACACACTAGT+TGG - chr1_3:59857653-59857672 None:intergenic 45.0%
GGACTGTGAACAAGCTGTAT+TGG + chr1_3:59857742-59857761 Msa0129770:CDS 45.0%
TCAAAGCCAACAGTCGTAAG+TGG + chr1_3:59857821-59857840 Msa0129770:CDS 45.0%
! ACTTAAGAATGGTTTGGCCG+AGG + chr1_3:59857988-59858007 Msa0129770:CDS 45.0%
!! GAGCAAAAACTGGCCTTAGT+TGG - chr1_3:59858030-59858049 None:intergenic 45.0%
CTGGATCACTTGGATAAGAG+AGG - chr1_3:59858077-59858096 None:intergenic 45.0%
!! ACATGTGGGGAGTGCTTAAT+AGG - chr1_3:59858744-59858763 None:intergenic 45.0%
! ATTGGACATGTCACTTCCTC+AGG + chr1_3:59859196-59859215 Msa0129770:CDS 45.0%
! TTGGACATGTCACTTCCTCA+GGG + chr1_3:59859197-59859216 Msa0129770:CDS 45.0%
GGGAAGTCATATACTGAAGC+TGG + chr1_3:59859217-59859236 Msa0129770:CDS 45.0%
CTCTACCTGATACTGGTGTA+AGG + chr1_3:59859595-59859614 Msa0129770:CDS 45.0%
ACATCCCTTACACCAGTATC+AGG - chr1_3:59859603-59859622 None:intergenic 45.0%
CATTCATAAGTGCCTCAAGC+AGG - chr1_3:59859638-59859657 None:intergenic 45.0%
! GATCTTTTCCTCCAGGTTCT+TGG - chr1_3:59859673-59859692 None:intergenic 45.0%
! ATGCTAGGATCTTTTCCTCC+AGG - chr1_3:59859680-59859699 None:intergenic 45.0%
ACTTCAAAGCTAGGGATGCT+AGG - chr1_3:59859695-59859714 None:intergenic 45.0%
ACGCAAGGAAGAGAATACCA+CGG + chr1_3:59860239-59860258 Msa0129770:CDS 45.0%
TAACAGCTTTCTTGTGCTCG+CGG - chr1_3:59860279-59860298 None:intergenic 45.0%
!! TACCCGGATTGTTTTGTCCA+AGG - chr1_3:59860341-59860360 None:intergenic 45.0%
ACATAGCATGACGAGTTACC+CGG - chr1_3:59860357-59860376 None:intergenic 45.0%
GTGGGTCAACAAAAAGATGC+AGG - chr1_3:59860616-59860635 None:intergenic 45.0%
GCTAGCAGCCAATGCTAAAA+TGG + chr1_3:59860758-59860777 Msa0129770:CDS 45.0%
AACTCAAGGAACGGGAGTTA+AGG + chr1_3:59860791-59860810 Msa0129770:intron 45.0%
AAACTGTACTGTGGTTGCTC+TGG + chr1_3:59860971-59860990 Msa0129770:CDS 45.0%
! AAGACTTACCGGCTGAATGA+TGG + chr1_3:59861175-59861194 Msa0129770:intron 45.0%
TCTTCTATTGATGCAACCGC+AGG + chr1_3:59861318-59861337 Msa0129770:CDS 45.0%
TATTGATGCAACCGCAGGAA+AGG + chr1_3:59861323-59861342 Msa0129770:CDS 45.0%
ACTTTCCTCCAAAATGGTGG+TGG + chr1_3:59861427-59861446 Msa0129770:CDS 45.0%
CTTTCCTCCAAAATGGTGGT+GGG + chr1_3:59861428-59861447 Msa0129770:CDS 45.0%
CCGAGTTGCTTCCATCAAAA+TGG + chr1_3:59861559-59861578 Msa0129770:CDS 45.0%
GTTGCTTCCATCAAAATGGC+TGG + chr1_3:59861563-59861582 Msa0129770:CDS 45.0%
!! GTTACCACCAGCCATTTTGA+TGG - chr1_3:59861573-59861592 None:intergenic 45.0%
TTCCTCTGATGGAAAGATCC+AGG + chr1_3:59861646-59861665 Msa0129770:CDS 45.0%
AACCTGGATCTTTCCATCAG+AGG - chr1_3:59861651-59861670 None:intergenic 45.0%
CTGATGGAAAGATCCAGGTT+AGG + chr1_3:59861651-59861670 Msa0129770:intron 45.0%
TCAGTTACTGGGAAAGAAGC+TGG - chr1_3:59861714-59861733 None:intergenic 45.0%
TTGGATTCTTGATGCAGGTC+TGG + chr1_3:59861742-59861761 Msa0129770:intron 45.0%
TGGATTCTTGATGCAGGTCT+GGG + chr1_3:59861743-59861762 Msa0129770:intron 45.0%
!! AGAAATAAAATAAAATAAAA+TGG - chr1_3:59856000-59856019 None:intergenic 5.0%
TCATGCAAAGGAGTCATCGG+CGG - chr1_3:59855786-59855805 None:intergenic 50.0%
! CTCCTTTGCATGAGTTGAGC+CGG + chr1_3:59855793-59855812 Msa0129770:CDS 50.0%
ATATGATCGGAGCTCGTGTC+TGG - chr1_3:59856675-59856694 None:intergenic 50.0%
GATCCTGTCACCCTTGAAAC+AGG + chr1_3:59857293-59857312 Msa0129770:CDS 50.0%
GGAGAACATGAAGAACCCCT+TGG - chr1_3:59857503-59857522 None:intergenic 50.0%
TTGCTATGGCGGCAGCTTTA+GGG - chr1_3:59858141-59858160 None:intergenic 50.0%
ATTGCTATGGCGGCAGCTTT+AGG - chr1_3:59858142-59858161 None:intergenic 50.0%
TAGCGTGAGAGGAATCTGTG+TGG + chr1_3:59858396-59858415 Msa0129770:CDS 50.0%
!! AATTGGTGTTGGACGAGGAG+CGG - chr1_3:59858789-59858808 None:intergenic 50.0%
GCTGGATTGCTGAAGATTGC+AGG + chr1_3:59859235-59859254 Msa0129770:CDS 50.0%
! GTCAGAGTGTCCCAATTGCT+CGG - chr1_3:59859293-59859312 None:intergenic 50.0%
! CTTGCCTTGTTCTTGCCACA+TGG + chr1_3:59859553-59859572 Msa0129770:CDS 50.0%
TCAGCCATGTGGCAAGAACA+AGG - chr1_3:59859560-59859579 None:intergenic 50.0%
CTGGTGTAAGGGATGTTGCT+CGG + chr1_3:59859607-59859626 Msa0129770:CDS 50.0%
CTGAATGGTCAGGTCTTGAG+TGG + chr1_3:59860107-59860126 Msa0129770:CDS 50.0%
GTCTTGAGTGGACATGCTGA+TGG + chr1_3:59860119-59860138 Msa0129770:CDS 50.0%
CGCAAGGAAGAGAATACCAC+GGG + chr1_3:59860240-59860259 Msa0129770:CDS 50.0%
AACAGCTTTCTTGTGCTCGC+GGG - chr1_3:59860278-59860297 None:intergenic 50.0%
GTTTGTCCCCAGAAACAGCA+AGG - chr1_3:59860955-59860974 None:intergenic 50.0%
TCTGGGGACAAACTGTACTG+TGG + chr1_3:59860962-59860981 Msa0129770:CDS 50.0%
! TAGCGATCCCACCACCATTT+TGG - chr1_3:59861438-59861457 None:intergenic 50.0%
!! CACTGTTGATGGCTACACGA+TGG - chr1_3:59861478-59861497 None:intergenic 50.0%
GCTTCCATCAAAATGGCTGG+TGG + chr1_3:59861566-59861585 Msa0129770:CDS 50.0%
TCATTAGCGTCAGACGCTGA+TGG + chr1_3:59861605-59861624 Msa0129770:CDS 50.0%
GGCTCCGCAATTGGCAACAT+AGG - chr1_3:59855765-59855784 None:intergenic 55.0%
! GACCGGCTCAACTCATGCAA+AGG - chr1_3:59855798-59855817 None:intergenic 55.0%
TGGCCTGTTTCAAGGGTGAC+AGG - chr1_3:59857299-59857318 None:intergenic 55.0%
ATAGAGCCTGTCGCGTGATG+GGG - chr1_3:59857376-59857395 None:intergenic 55.0%
GATAGAGCCTGTCGCGTGAT+GGG - chr1_3:59857377-59857396 None:intergenic 55.0%
GCTGGAAACGATAGCGTGAG+AGG + chr1_3:59858385-59858404 Msa0129770:CDS 55.0%
GAGCATGTGTGTCAGCCATG+TGG - chr1_3:59859571-59859590 None:intergenic 55.0%
TGCTCGGAAATCCCTGCTTG+AGG + chr1_3:59859623-59859642 Msa0129770:CDS 55.0%
CCAGGTTCTTGGATGACTGG+AGG - chr1_3:59859662-59859681 None:intergenic 55.0%
CCTCCAGTCATCCAAGAACC+TGG + chr1_3:59859659-59859678 Msa0129770:CDS 55.0%
CCTCCAGGTTCTTGGATGAC+TGG - chr1_3:59859665-59859684 None:intergenic 55.0%
CCAGTCATCCAAGAACCTGG+AGG + chr1_3:59859662-59859681 Msa0129770:CDS 55.0%
CTTCCTTGCGTCCCATACCT+AGG - chr1_3:59860230-59860249 None:intergenic 55.0%
CGGGTTTCTTGAATCACCCG+TGG - chr1_3:59860259-59860278 None:intergenic 55.0%
! CTTACCGGCTGAATGATGGC+AGG + chr1_3:59861179-59861198 Msa0129770:intron 55.0%
ACCTCCTGCCATCATTCAGC+CGG - chr1_3:59861186-59861205 None:intergenic 55.0%
! CGATCCCACCACCATTTTGG+AGG - chr1_3:59861435-59861454 None:intergenic 55.0%
! GTGGTGGGATCGCTATCAAC+TGG + chr1_3:59861443-59861462 Msa0129770:CDS 55.0%
CTTGATGCAGGTCTGGGCAT+TGG + chr1_3:59861749-59861768 Msa0129770:intron 55.0%
AACATGCCCCATCACGCGAC+AGG + chr1_3:59857367-59857386 Msa0129770:CDS 60.0%
GGATAGAGCCTGTCGCGTGA+TGG - chr1_3:59857378-59857397 None:intergenic 60.0%
CCTTGCGTCCCATACCTAGG+AGG - chr1_3:59860227-59860246 None:intergenic 60.0%
CCTCCTAGGTATGGGACGCA+AGG + chr1_3:59860224-59860243 Msa0129770:intron 60.0%
ACCGGCTGAATGATGGCAGG+AGG + chr1_3:59861182-59861201 Msa0129770:intron 60.0%
GTCATCGGCGGCTCCGCAAT+TGG - chr1_3:59855774-59855793 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 59854976 59861776 59854976 ID=Msa0129770;Name=Msa0129770
chr1_3 mRNA 59854976 59861776 59854976 ID=Msa0129770-mRNA-1;Parent=Msa0129770;Name=Msa0129770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.26|0.12|1|1|1|16|0|1494
chr1_3 exon 59854976 59855955 59854976 ID=Msa0129770-mRNA-1:exon:19543;Parent=Msa0129770-mRNA-1
chr1_3 exon 59856178 59856241 59856178 ID=Msa0129770-mRNA-1:exon:19544;Parent=Msa0129770-mRNA-1
chr1_3 exon 59856351 59856719 59856351 ID=Msa0129770-mRNA-1:exon:19545;Parent=Msa0129770-mRNA-1
chr1_3 exon 59856936 59857021 59856936 ID=Msa0129770-mRNA-1:exon:19546;Parent=Msa0129770-mRNA-1
chr1_3 exon 59857169 59858449 59857169 ID=Msa0129770-mRNA-1:exon:19547;Parent=Msa0129770-mRNA-1
chr1_3 exon 59858839 59858983 59858839 ID=Msa0129770-mRNA-1:exon:19548;Parent=Msa0129770-mRNA-1
chr1_3 exon 59859076 59859333 59859076 ID=Msa0129770-mRNA-1:exon:19549;Parent=Msa0129770-mRNA-1
chr1_3 exon 59859423 59859732 59859423 ID=Msa0129770-mRNA-1:exon:19550;Parent=Msa0129770-mRNA-1
chr1_3 exon 59859818 59859942 59859818 ID=Msa0129770-mRNA-1:exon:19551;Parent=Msa0129770-mRNA-1
chr1_3 exon 59860032 59860151 59860032 ID=Msa0129770-mRNA-1:exon:19552;Parent=Msa0129770-mRNA-1
chr1_3 exon 59860232 59860357 59860232 ID=Msa0129770-mRNA-1:exon:19553;Parent=Msa0129770-mRNA-1
chr1_3 exon 59860690 59860788 59860690 ID=Msa0129770-mRNA-1:exon:19554;Parent=Msa0129770-mRNA-1
chr1_3 exon 59860896 59861006 59860896 ID=Msa0129770-mRNA-1:exon:19555;Parent=Msa0129770-mRNA-1
chr1_3 exon 59861201 59861344 59861201 ID=Msa0129770-mRNA-1:exon:19556;Parent=Msa0129770-mRNA-1
chr1_3 exon 59861419 59861667 59861419 ID=Msa0129770-mRNA-1:exon:19557;Parent=Msa0129770-mRNA-1
chr1_3 exon 59861759 59861776 59861759 ID=Msa0129770-mRNA-1:exon:19558;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59854976 59855955 59854976 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59856178 59856241 59856178 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59856351 59856719 59856351 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59856936 59857021 59856936 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59857169 59858449 59857169 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59858839 59858983 59858839 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59859076 59859333 59859076 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59859423 59859732 59859423 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59859818 59859942 59859818 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59860032 59860151 59860032 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59860232 59860357 59860232 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59860690 59860788 59860690 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59860896 59861006 59860896 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59861201 59861344 59861201 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59861419 59861667 59861419 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
chr1_3 CDS 59861759 59861776 59861759 ID=Msa0129770-mRNA-1:cds;Parent=Msa0129770-mRNA-1
Gene Sequence

>Msa0129770

ATGTCAGGGAATTTCAGATTCATGATGGATCAGAAGGATATTGTTAGATTCTTGACTACAACTATAGATAGTTTCATTCAAGATAGGTTAATCAACAAAGAACAAAGAACACAACATAAAGATCAATGTGCTGAGAGATTAGCAGCTGAAGATGGAAACACCGACAAAGAAACTGAGGTAGAATATTCTGATCAAGCAGTATTAGCAAATTTGGATTGGGGCATTGAGGCTCTTGAAGAAGCTATTAATACCTATAATATGGAAACTAAGCTTGCAAGATTAGATTATGCTGAGAAAATGTTGCAAGTGTGTGCAATGTTGAATCCTAAGCAAAAAACTGCTGGAGTACCAAATTCATATTTATCAGCTTGGGCACATTTGAATCTATCCTATTTATGGAAATTGAGGAACAACATTAAGAGTTGTATTTATCATTCTCTGGAGATGTTCATTGTTGATCCTTTTTTCTCTAGGATTGATTTTGCTCCTGAATTATGGAAAAACCTGTTTCTTCCACATATGAGTTCAATTGTAGGGTGGTATTCAGAGGAGAGACATAAGCTTATGATGGAAGTGTTACCTGAATCTTCTGATTTTTCTTATACTGCTGATTTCGATAAAGTTTTCAATGAGTCTTTGGTATTTTCTATGAGGCCAAATCAGCTTGAGAAATTGCAAAAACTTGAGCAGCTTTATGGAGAGTCATTAGATGAGAACACAAGGCTATATGCAAAATATTATAATGATTGTATGAACCCTGATTCTACCTCAAGCAAGAAGGTTGTTCCTATGTTGCCAATTGCGGAGCCGCCGATGACTCCTTTGCATGAGTTGAGCCGGTCTGTTCCTGATTTTGTAAAGTTTGGTCCTATTTTGCCCAAGAGTTCTGGATTTTCTATGACAACAAGAAGACCTAATGATGGTTTAAATGAAACAACCAGGTTAGAGCTATGCACTCAAACTTTGAATTCTTGGAATCTAGAGACTATAGCTTCAAATTCCAACCATTCAAAGGGGGAACAATCATCACTATGGTGTGCTAAGGAGAGCATAATTGAAGAGATTGAAGACGGTTCGGATTCTGAGCATTATGATGCATCTGTGGATTCTGATAAAATCAATATTTTCTCACCTGAATCGAAGAAAAATATCAAGGATGAAGATGTTGAACCAAAAGTATATCGATCAAACCAAAAGAATCAAATGAATTCTCCCAATATATCTCCTATGGAATCTCCAAGAAGAGCTTCAAATAACTCATCTACAAATCCTCATATCCGTAGGAAAAAAGAATCAAAGTTTTTGCGGTTACTATCTAATCGTTTTACGGGATCAATTGTTTCTGATCACTCTCTATCATCATCTCCAGACACGAGCTCCGATCATATTTTCACTGCCGATGAAGAAGTTATGGTCTTGAATAATATTAAGAGGAAGAATGGTAGTCAAACACCAAGCATTAATCAAGACAATGAGAATAGTCTGGTGCTGAATGACAGTTCACATTGTGAAAGTGAAGATGGTTATCAAAGCTCTAGTTCATTTCCAAAATTAGAAAAACTGACTATTGGATCAAAACCACCAAAAGATTTTGTTTGTCCAATCACAGGTCAGATATTTAGTGATCCTGTCACCCTTGAAACAGGCCAAACCTATGAAAGAAAAGCTATTCAAGAGTGGTTTGGAACAGGAAACACAACATGCCCCATCACGCGACAGGCTCTATCCGCAAACATCTTACCAAAAACAAACTATGTTTTGAAGAGATTGATAGTATCATGGAAAGAACAGAATCCTGAACTAGCTCAAGAATTCTCAAATTCTAACACACCAAGGGGTTCTTCATGTTCTCCCTCTGCAAAAGACATCACAATGGTTTCGAGTATACAAAGAACAACTGATTCACCAAGTCAGAAGTACAAAGACGATTATATTAGACAAAGGAACAACAGATTTACGAGGGTTTCTGTCGGTGCATCTCCAACTAGTGTGTTATCGCAAGCTGCAGTTGAAATGATTATAAATTCCTTGACACCTTACATCACAAGTCTATGTACATCAGAAAACTTGCAGGACTGTGAACAAGCTGTATTGGAAATAGCAAGATTGTGGAAGGATTCAAAGACTGATCCTCAGATTCATTCTTATTTATCAAAGCCAACAGTCGTAAGTGGTTTAGTAGAAATTCTCTCTGCTTCTCTAAATAGAGAAGTTCTGAGAAGATCAATTTATATTCTTTCAGAGCTAATCTTTTCAGATGAAAGAGTTGGAGAAACACTTAACAGTGTAGATTCTGACTTTGATTGCTTGGCTATGCTACTTAAGAATGGTTTGGCCGAGGCTGCACTACTTATTTACCAACTAAGGCCAGTTTTTGCTCAGCTTTCAGAACATGAACTTATACCCTCTCTTATCCAAGTGATCCAGAATAAAAGTGAGGATATAGATGATTTTCAGTTAGCTATAGACCCTAAAGCTGCCGCCATAGCAATTCTTGAGCAAATTTTAATAGGAGGGGATGAATATAATAGGTCAGTCAATGCTTCAAGTGTTATCTCAGCAAACGGAATTCCAGCCATAGTTAAGTATTTGGACAAAACCGAAGGAAGGAGACCTGTAATTTCCATACTTTTGTGTTGCATGCAAGCTGAAAAAAGTTGCAAGAGCTCAATAGCAAATAGAATCGAATTGTCACCCATTCTTGAATTATTTCACGCTGGAAACGATAGCGTGAGAGGAATCTGTGTGGAGTTTCTATCAGAACTGGTTCGATTGAATAGAAGGACGTCCAGCAACCATATATTACAGATAATCAAGGATGAAGGAGCTTTCAGTACAATGCATACATTTCTTGTATATCTTCAGATGGCTCCAATGGAACATCAAATTGCTGTTGCCAGTCTTCTTCTTCAACTTGATCTTTTGGCTGAGCCACGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACACTGATAGAAGCACTTTGGCAAAAGGACTTCTCAAATAATCAAATGAAGGCTTTAGATGCTTTACTATTTCTTATTGGACATGTCACTTCCTCAGGGAAGTCATATACTGAAGCTGGATTGCTGAAGATTGCAGGATTTGATCAACCTTACAATGTTTTAATGAAGGCCGAGCAATTGGGACACTCTGACAATGATTTCATGGAAACAATGGAGGATGAAAAAAACGCCATGAAATCTTGGCAGAAAAGGGTAGCTTCTGTACTTTGCAATCATGAAAACGGTTCAATATTTCAAGCTTTGGAAGAATGCCTAAAGAGTAACTCCTTAAAGATGGCAAAATCTTGCCTTGTTCTTGCCACATGGCTGACACACATGCTCTTTACTCTACCTGATACTGGTGTAAGGGATGTTGCTCGGAAATCCCTGCTTGAGGCACTTATGAATGTCCTCCAGTCATCCAAGAACCTGGAGGAAAAGATCCTAGCATCCCTAGCTTTGAAGTCTTTCATTAGTGATCCAGCTGTTCACGAAGTACTAAGAGTTTATGCTAAAAGCATCTATAGAATCTTGAGGAAGCTGAAGAAATATTCAACAGTTGCAGCTGATATTTTGAAAGCCTTACTAAACTTAAATTCTGTTGATGTGACAGAGTTGTGGAGCTGTAAAGAAGTAGTTGAATTAGATTTGAGCTCAAATGGAGAGGTGCTTTCTTTGCATTATCTGAATGGTCAGGTCTTGAGTGGACATGCTGATGGAACTATCAAGGTATGGGACGCAAGGAAGAGAATACCACGGGTGATTCAAGAAACCCGCGAGCACAAGAAAGCTGTTACATCTCTTTGCTCTTCAGTTGATAAACTCTACAGTTCTTCCTTGGACAAAACAATCCGGGTCTGGACAATTAAACCTGACGGGATTAAATGTATAGATGTTTATGACGTTAAGGAGGCAGTGTATGAGCTAGCAGCCAATGCTAAAATGGCATGCTATGTTTTTAATTGGATAGATGCTCCCAAGTTCATCAATTTCAACAAATATGTAAAATGCCTTGCTGTTTCTGGGGACAAACTGTACTGTGGTTGCTCTGGTTACAGCATACAAGAGGTTGACTTGTCCAAATATACATCAACTTCATTCTTCACTGGTACAAGAAAATTGTTGGGAAAACAAACCATACACTCCCTTCAAATTCATGATGATTTGCTCTTTGCTTGTGGTTCTTCTATTGATGCAACCGCAGGAAAGATATTTTCACTTTCCTCCAAAATGGTGGTGGGATCGCTATCAACTGGACTCGATGTCCATCGTGTAGCCATCAACAGTGACTTCATATTTGCTGGTACGAAATTTGGCACCATTGAAGTTTGGCTAAAAGACAAGTTCACCCGAGTTGCTTCCATCAAAATGGCTGGTGGTAACACAAAAATTACATCATTAGCGTCAGACGCTGATGGAATGATGCTTTTTGTTGGTTCCTCTGATGGAAAGATCCAGGTCTGGGCATTGGACTAA
Protein sequence

>Msa0129770

MSGNFRFMMDQKDIVRFLTTTIDSFIQDRLINKEQRTQHKDQCAERLAAEDGNTDKETEVEYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNSYLSAWAHLNLSYLWKLRNNIKSCIYHSLEMFIVDPFFSRIDFAPELWKNLFLPHMSSIVGWYSEERHKLMMEVLPESSDFSYTADFDKVFNESLVFSMRPNQLEKLQKLEQLYGESLDENTRLYAKYYNDCMNPDSTSSKKVVPMLPIAEPPMTPLHELSRSVPDFVKFGPILPKSSGFSMTTRRPNDGLNETTRLELCTQTLNSWNLETIASNSNHSKGEQSSLWCAKESIIEEIEDGSDSEHYDASVDSDKINIFSPESKKNIKDEDVEPKVYRSNQKNQMNSPNISPMESPRRASNNSSTNPHIRRKKESKFLRLLSNRFTGSIVSDHSLSSSPDTSSDHIFTADEEVMVLNNIKRKNGSQTPSINQDNENSLVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWFGTGNTTCPITRQALSANILPKTNYVLKRLIVSWKEQNPELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTTDSPSQKYKDDYIRQRNNRFTRVSVGASPTSVLSQAAVEMIINSLTPYITSLCTSENLQDCEQAVLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEILSASLNREVLRRSIYILSELIFSDERVGETLNSVDSDFDCLAMLLKNGLAEAALLIYQLRPVFAQLSEHELIPSLIQVIQNKSEDIDDFQLAIDPKAAAIAILEQILIGGDEYNRSVNASSVISANGIPAIVKYLDKTEGRRPVISILLCCMQAEKSCKSSIANRIELSPILELFHAGNDSVRGICVEFLSELVRLNRRTSSNHILQIIKDEGAFSTMHTFLVYLQMAPMEHQIAVASLLLQLDLLAEPRKMSIYREEAVETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFDQPYNVLMKAEQLGHSDNDFMETMEDEKNAMKSWQKRVASVLCNHENGSIFQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTGVRDVARKSLLEALMNVLQSSKNLEEKILASLALKSFISDPAVHEVLRVYAKSIYRILRKLKKYSTVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWDARKRIPRVIQETREHKKAVTSLCSSVDKLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANAKMACYVFNWIDAPKFINFNKYVKCLAVSGDKLYCGCSGYSIQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADGMMLFVGSSDGKIQVWALD*