Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172380 | sp|O22768|UNE12_ARATH | 76.374 | 182 | 38 | 3 | 174 | 353 | 129 | 307 | 2.54e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172380 | A0A072VNM4 | 97.199 | 357 | 7 | 2 | 1 | 356 | 1 | 355 | 0.0 | 703 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0172380 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0172380 | -0.811360 | 7.278027e-51 | -8.615850e-47 |
| Msa0011540 | Msa0172380 | -0.811202 | 7.875827e-51 | -8.615850e-47 |
| Msa0018610 | Msa0172380 | -0.813031 | 3.144966e-51 | -8.615850e-47 |
| Msa0025290 | Msa0172380 | -0.803341 | 3.651368e-49 | -8.615850e-47 |
| Msa0027020 | Msa0172380 | -0.807002 | 6.252212e-50 | -8.615850e-47 |
| Msa0032340 | Msa0172380 | 0.829265 | 5.668761e-55 | -8.615850e-47 |
| Msa0047660 | Msa0172380 | -0.839720 | 1.338206e-57 | -8.615850e-47 |
| Msa0064490 | Msa0172380 | -0.807359 | 5.254668e-50 | -8.615850e-47 |
| Msa0073220 | Msa0172380 | -0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0075080 | Msa0172380 | -0.818099 | 2.339490e-52 | -8.615850e-47 |
| Msa0076590 | Msa0172380 | -0.806324 | 8.695072e-50 | -8.615850e-47 |
| Msa0079520 | Msa0172380 | 0.857565 | 1.496386e-62 | -8.615850e-47 |
| Msa0089700 | Msa0172380 | -0.815818 | 7.606466e-52 | -8.615850e-47 |
| Msa0108490 | Msa0172380 | -0.806933 | 6.466753e-50 | -8.615850e-47 |
| Msa0122930 | Msa0172380 | -0.817231 | 3.670179e-52 | -8.615850e-47 |
| Msa0135760 | Msa0172380 | 0.838501 | 2.769878e-57 | -8.615850e-47 |
| Msa0138680 | Msa0172380 | -0.847921 | 8.517391e-60 | -8.615850e-47 |
| Msa0162170 | Msa0172380 | -0.843205 | 1.616669e-58 | -8.615850e-47 |
| Msa0167570 | Msa0172380 | -0.830790 | 2.408463e-55 | -8.615850e-47 |
| Msa0172380 | Msa0180380 | 0.814327 | 1.630021e-51 | -8.615850e-47 |
| Msa0172380 | Msa0237690 | -0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0172380 | Msa0294170 | -0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0172380 | Msa0296490 | -0.811760 | 5.957807e-51 | -8.615850e-47 |
| Msa0172380 | Msa0298820 | -0.800811 | 1.209889e-48 | -8.615850e-47 |
| Msa0172380 | Msa0341950 | -0.801306 | 9.584248e-49 | -8.615850e-47 |
| Msa0172380 | Msa0386230 | -0.811171 | 8.000634e-51 | -8.615850e-47 |
| Msa0172380 | Msa0412470 | -0.817913 | 2.577022e-52 | -8.615850e-47 |
| Msa0172380 | Msa0444770 | -0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0172380 | Msa0467070 | -0.808729 | 2.684442e-50 | -8.615850e-47 |
| Msa0172380 | Msa0474630 | -0.812345 | 4.443211e-51 | -8.615850e-47 |
| Msa0172380 | Msa0480090 | -0.802288 | 6.023916e-49 | -8.615850e-47 |
| Msa0172380 | Msa0492330 | -0.806447 | 8.191328e-50 | -8.615850e-47 |
| Msa0172380 | Msa0500580 | -0.803367 | 3.605796e-49 | -8.615850e-47 |
| Msa0172380 | Msa0506700 | -0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0172380 | Msa0514630 | -0.816034 | 6.809652e-52 | -8.615850e-47 |
| Msa0172380 | Msa0519100 | -0.827127 | 1.857312e-54 | -8.615850e-47 |
| Msa0172380 | Msa0522820 | -0.818131 | 2.300755e-52 | -8.615850e-47 |
| Msa0172380 | Msa0543010 | -0.813434 | 2.564598e-51 | -8.615850e-47 |
| Msa0172380 | Msa0562040 | -0.803436 | 3.490084e-49 | -8.615850e-47 |
| Msa0172380 | Msa0608250 | -0.821493 | 3.920377e-53 | -8.615850e-47 |
| Msa0172380 | Msa0619960 | -0.802425 | 5.646135e-49 | -8.615850e-47 |
| Msa0172380 | Msa0620050 | -0.809830 | 1.558864e-50 | -8.615850e-47 |
| Msa0172380 | Msa0637590 | 0.815184 | 1.052603e-51 | -8.615850e-47 |
| Msa0172380 | Msa0639040 | -0.809239 | 2.087717e-50 | -8.615850e-47 |
| Msa0172380 | Msa0651120 | -0.815933 | 7.171230e-52 | -8.615850e-47 |
| Msa0172380 | Msa0691320 | -0.828627 | 8.093308e-55 | -8.615850e-47 |
| Msa0172380 | Msa0699200 | -0.813306 | 2.736675e-51 | -8.615850e-47 |
| Msa0172380 | Msa0706790 | -0.823297 | 1.494326e-53 | -8.615850e-47 |
| Msa0172380 | Msa0706860 | -0.814178 | 1.758102e-51 | -8.615850e-47 |
| Msa0172380 | Msa0719900 | -0.826501 | 2.620600e-54 | -8.615850e-47 |
| Msa0172380 | Msa0745270 | -0.808056 | 3.735185e-50 | -8.615850e-47 |
| Msa0172380 | Msa0753590 | -0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0172380 | Msa0755550 | -0.807098 | 5.967283e-50 | -8.615850e-47 |
| Msa0172380 | Msa0762860 | -0.825898 | 3.646994e-54 | -8.615850e-47 |
| Msa0172380 | Msa0762900 | -0.832962 | 7.006578e-56 | -8.615850e-47 |
| Msa0172380 | Msa0784780 | -0.825347 | 4.924795e-54 | -8.615850e-47 |
| Msa0172380 | Msa0804690 | -0.811027 | 8.594983e-51 | -8.615850e-47 |
| Msa0172380 | Msa0842660 | -0.801664 | 8.094139e-49 | -8.615850e-47 |
| Msa0172380 | Msa0858250 | -0.827144 | 1.839886e-54 | -8.615850e-47 |
| Msa0172380 | Msa0868500 | -0.800282 | 1.550850e-48 | -8.615850e-47 |
| Msa0172380 | Msa0882480 | -0.828443 | 8.966329e-55 | -8.615850e-47 |
| Msa0172380 | Msa0925940 | 0.816293 | 5.957524e-52 | -8.615850e-47 |
| Msa0172380 | Msa0958960 | -0.811006 | 8.687275e-51 | -8.615850e-47 |
| Msa0172380 | Msa0966590 | 0.813324 | 2.711699e-51 | -8.615850e-47 |
| Msa0172380 | Msa0976820 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0172380 | Msa1052800 | -0.807924 | 3.985231e-50 | -8.615850e-47 |
| Msa0172380 | Msa1058550 | -0.814509 | 1.485870e-51 | -8.615850e-47 |
| Msa0172380 | Msa1091460 | -0.802428 | 5.637410e-49 | -8.615850e-47 |
| Msa0172380 | Msa1126320 | -0.815617 | 8.435143e-52 | -8.615850e-47 |
| Msa0172380 | Msa1129510 | -0.801942 | 7.095440e-49 | -8.615850e-47 |
| Msa0172380 | Msa1156100 | -0.803402 | 3.547180e-49 | -8.615850e-47 |
| Msa0172380 | Msa1163130 | -0.837618 | 4.673292e-57 | -8.615850e-47 |
| Msa0172380 | Msa1164720 | -0.848499 | 5.896676e-60 | -8.615850e-47 |
| Msa0172380 | Msa1197740 | -0.819852 | 9.340954e-53 | -8.615850e-47 |
| Msa0172380 | Msa1203320 | -0.809987 | 1.441920e-50 | -8.615850e-47 |
| Msa0172380 | Msa1251440 | -0.825170 | 5.425005e-54 | -8.615850e-47 |
| Msa0172380 | Msa1267560 | -0.807797 | 4.241332e-50 | -8.615850e-47 |
| Msa0172380 | Msa1278120 | -0.839424 | 1.597594e-57 | -8.615850e-47 |
| Msa0172380 | Msa1303690 | -0.807339 | 5.305625e-50 | -8.615850e-47 |
| Msa0172380 | Msa1325560 | -0.817024 | 4.087076e-52 | -8.615850e-47 |
| Msa0172380 | Msa1334690 | -0.819507 | 1.119936e-52 | -8.615850e-47 |
| Msa0172380 | Msa1350130 | -0.810241 | 1.270923e-50 | -8.615850e-47 |
| Msa0172380 | Msa1363170 | -0.807992 | 3.853896e-50 | -8.615850e-47 |
| Msa0172380 | Msa1376680 | -0.800806 | 1.212757e-48 | -8.615850e-47 |
| Msa0172380 | Msa1386820 | -0.817231 | 3.670282e-52 | -8.615850e-47 |
| Msa0172380 | Msa1419760 | -0.808228 | 3.434234e-50 | -8.615850e-47 |
| Msa0172380 | Msa1455560 | -0.800722 | 1.261437e-48 | -8.615850e-47 |
| Msa0172380 | Msa1462700 | -0.802503 | 5.438922e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172380 | MtrunA17_Chr1g0190731 | 97.199 | 357 | 7 | 2 | 1 | 356 | 1 | 355 | 0.0 | 703 |
| Msa0172380 | MtrunA17_Chr1g0184841 | 79.775 | 178 | 36 | 0 | 175 | 352 | 101 | 278 | 2.30e-89 | 270 |
| Msa0172380 | MtrunA17_Chr4g0074161 | 64.130 | 184 | 52 | 4 | 167 | 336 | 173 | 356 | 1.15e-61 | 202 |
| Msa0172380 | MtrunA17_Chr7g0234761 | 64.000 | 75 | 26 | 1 | 185 | 258 | 308 | 382 | 2.02e-22 | 98.2 |
| Msa0172380 | MtrunA17_Chr8g0339091 | 64.000 | 75 | 26 | 1 | 185 | 258 | 282 | 356 | 4.54e-22 | 97.1 |
| Msa0172380 | MtrunA17_Chr3g0131771 | 48.544 | 103 | 52 | 1 | 183 | 284 | 136 | 238 | 6.30e-22 | 95.1 |
| Msa0172380 | MtrunA17_Chr3g0144641 | 69.697 | 66 | 19 | 1 | 194 | 258 | 191 | 256 | 1.94e-21 | 94.4 |
| Msa0172380 | MtrunA17_Chr1g0152131 | 68.182 | 66 | 20 | 1 | 194 | 258 | 260 | 325 | 4.05e-21 | 94.0 |
| Msa0172380 | MtrunA17_Chr4g0035101 | 68.182 | 66 | 20 | 1 | 194 | 258 | 143 | 208 | 1.37e-20 | 91.3 |
| Msa0172380 | MtrunA17_Chr8g0365941 | 68.182 | 66 | 20 | 1 | 194 | 258 | 305 | 370 | 2.02e-20 | 92.0 |
| Msa0172380 | MtrunA17_Chr5g0421111 | 68.182 | 66 | 20 | 1 | 194 | 258 | 365 | 430 | 3.55e-20 | 91.7 |
| Msa0172380 | MtrunA17_Chr8g0363921 | 65.152 | 66 | 22 | 1 | 194 | 258 | 151 | 216 | 4.08e-20 | 89.0 |
| Msa0172380 | MtrunA17_Chr5g0415291 | 60.000 | 75 | 29 | 1 | 185 | 258 | 103 | 177 | 5.12e-20 | 87.8 |
| Msa0172380 | MtrunA17_Chr8g0385911 | 65.152 | 66 | 22 | 1 | 194 | 258 | 145 | 210 | 1.63e-19 | 88.2 |
| Msa0172380 | MtrunA17_Chr1g0182791 | 51.316 | 76 | 33 | 1 | 196 | 271 | 319 | 390 | 8.03e-18 | 84.7 |
| Msa0172380 | MtrunA17_Chr1g0174271 | 50.549 | 91 | 39 | 3 | 176 | 260 | 275 | 365 | 9.79e-18 | 83.6 |
| Msa0172380 | MtrunA17_Chr4g0014771 | 59.091 | 66 | 26 | 1 | 193 | 257 | 117 | 182 | 2.58e-17 | 79.3 |
| Msa0172380 | MtrunA17_Chr1g0174161 | 39.200 | 125 | 68 | 4 | 194 | 312 | 160 | 282 | 3.80e-17 | 81.3 |
| Msa0172380 | MtrunA17_Chr1g0193321 | 52.857 | 70 | 29 | 1 | 196 | 265 | 464 | 529 | 5.01e-17 | 82.4 |
| Msa0172380 | MtrunA17_Chr6g0484271 | 41.593 | 113 | 52 | 4 | 194 | 300 | 155 | 259 | 5.39e-17 | 80.1 |
| Msa0172380 | MtrunA17_Chr5g0393721 | 58.462 | 65 | 27 | 0 | 193 | 257 | 223 | 287 | 5.62e-17 | 80.9 |
| Msa0172380 | MtrunA17_Chr1g0153241 | 46.835 | 79 | 36 | 1 | 178 | 256 | 75 | 147 | 1.06e-16 | 79.0 |
| Msa0172380 | MtrunA17_Chr1g0152651 | 56.923 | 65 | 28 | 0 | 193 | 257 | 273 | 337 | 1.06e-16 | 80.5 |
| Msa0172380 | MtrunA17_Chr3g0134741 | 46.341 | 82 | 44 | 0 | 193 | 274 | 228 | 309 | 1.39e-16 | 79.7 |
| Msa0172380 | MtrunA17_Chr7g0262691 | 50.000 | 70 | 35 | 0 | 197 | 266 | 255 | 324 | 2.07e-16 | 80.1 |
| Msa0172380 | MtrunA17_Chr7g0258161 | 60.606 | 66 | 25 | 1 | 194 | 258 | 173 | 238 | 2.74e-16 | 79.0 |
| Msa0172380 | MtrunA17_Chr7g0258181 | 50.667 | 75 | 36 | 1 | 187 | 260 | 236 | 310 | 5.40e-16 | 77.8 |
| Msa0172380 | MtrunA17_Chr3g0095391 | 53.968 | 63 | 29 | 0 | 196 | 258 | 311 | 373 | 6.48e-16 | 78.6 |
| Msa0172380 | MtrunA17_Chr8g0351881 | 52.174 | 69 | 32 | 1 | 193 | 260 | 315 | 383 | 2.99e-15 | 76.3 |
| Msa0172380 | MtrunA17_Chr4g0032951 | 53.623 | 69 | 31 | 1 | 193 | 260 | 354 | 422 | 4.77e-15 | 75.9 |
| Msa0172380 | MtrunA17_Chr1g0207311 | 45.783 | 83 | 45 | 0 | 186 | 268 | 188 | 270 | 6.45e-15 | 74.3 |
| Msa0172380 | MtrunA17_Chr7g0270871 | 51.786 | 56 | 27 | 0 | 205 | 260 | 213 | 268 | 6.61e-15 | 75.1 |
| Msa0172380 | MtrunA17_Chr5g0402031 | 59.259 | 54 | 22 | 0 | 205 | 258 | 116 | 169 | 8.50e-15 | 74.7 |
| Msa0172380 | MtrunA17_Chr2g0329041 | 54.688 | 64 | 28 | 1 | 193 | 255 | 331 | 394 | 8.77e-15 | 75.1 |
| Msa0172380 | MtrunA17_Chr5g0435021 | 57.895 | 57 | 24 | 0 | 201 | 257 | 225 | 281 | 9.34e-15 | 74.3 |
| Msa0172380 | MtrunA17_Chr3g0134001 | 46.250 | 80 | 42 | 1 | 187 | 266 | 164 | 242 | 9.84e-15 | 73.6 |
| Msa0172380 | MtrunA17_Chr1g0207301 | 48.529 | 68 | 35 | 0 | 190 | 257 | 284 | 351 | 1.61e-14 | 73.9 |
| Msa0172380 | MtrunA17_Chr3g0087771 | 47.727 | 88 | 38 | 3 | 178 | 257 | 299 | 386 | 5.02e-14 | 72.8 |
| Msa0172380 | MtrunA17_Chr7g0271251 | 51.429 | 70 | 31 | 1 | 196 | 265 | 434 | 500 | 5.19e-14 | 73.2 |
| Msa0172380 | MtrunA17_Chr8g0384141 | 50.000 | 70 | 35 | 0 | 187 | 256 | 107 | 176 | 6.59e-14 | 70.9 |
| Msa0172380 | MtrunA17_Chr7g0231461 | 49.206 | 63 | 32 | 0 | 194 | 256 | 297 | 359 | 7.43e-13 | 69.3 |
| Msa0172380 | MtrunA17_Chr1g0185741 | 32.540 | 126 | 73 | 1 | 200 | 325 | 190 | 303 | 3.37e-12 | 66.6 |
| Msa0172380 | MtrunA17_Chr1g0213791 | 50.769 | 65 | 31 | 1 | 193 | 256 | 264 | 328 | 8.36e-12 | 65.5 |
| Msa0172380 | MtrunA17_Chr7g0243041 | 49.057 | 53 | 27 | 0 | 201 | 253 | 33 | 85 | 4.27e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172380 | AT4G02590.3 | 76.374 | 182 | 38 | 3 | 174 | 353 | 66 | 244 | 6.75e-80 | 244 |
| Msa0172380 | AT4G02590.2 | 76.374 | 182 | 38 | 3 | 174 | 353 | 129 | 307 | 2.58e-79 | 245 |
| Msa0172380 | AT4G02590.1 | 76.374 | 182 | 38 | 3 | 174 | 353 | 129 | 307 | 2.58e-79 | 245 |
| Msa0172380 | AT1G03040.1 | 47.684 | 367 | 82 | 12 | 11 | 353 | 19 | 299 | 1.30e-75 | 236 |
| Msa0172380 | AT1G03040.2 | 73.481 | 181 | 37 | 4 | 178 | 353 | 120 | 294 | 1.14e-73 | 230 |
| Msa0172380 | AT1G03040.3 | 44.388 | 392 | 89 | 11 | 11 | 353 | 19 | 330 | 1.16e-71 | 226 |
| Msa0172380 | AT2G24260.2 | 67.974 | 153 | 44 | 2 | 187 | 336 | 28 | 178 | 1.05e-61 | 198 |
| Msa0172380 | AT4G30980.1 | 60.947 | 169 | 56 | 2 | 168 | 336 | 104 | 262 | 5.21e-60 | 196 |
| Msa0172380 | AT2G24260.1 | 67.974 | 153 | 44 | 2 | 187 | 336 | 131 | 281 | 1.03e-59 | 196 |
| Msa0172380 | AT4G30980.2 | 60.947 | 169 | 56 | 2 | 168 | 336 | 152 | 310 | 1.19e-59 | 196 |
| Msa0172380 | AT5G58010.1 | 64.286 | 154 | 47 | 1 | 191 | 336 | 96 | 249 | 8.78e-59 | 192 |
| Msa0172380 | AT5G48560.1 | 51.376 | 109 | 48 | 2 | 177 | 284 | 284 | 388 | 2.78e-23 | 101 |
| Msa0172380 | AT5G48560.2 | 51.376 | 109 | 48 | 2 | 177 | 284 | 284 | 388 | 3.15e-23 | 100 |
| Msa0172380 | AT5G50915.3 | 50.980 | 102 | 39 | 2 | 186 | 286 | 128 | 219 | 1.44e-22 | 95.9 |
| Msa0172380 | AT5G50915.4 | 50.980 | 102 | 39 | 2 | 186 | 286 | 128 | 219 | 1.44e-22 | 95.9 |
| Msa0172380 | AT5G50915.1 | 50.980 | 102 | 39 | 2 | 186 | 286 | 128 | 219 | 1.86e-22 | 95.9 |
| Msa0172380 | AT5G50915.2 | 50.980 | 102 | 39 | 2 | 186 | 286 | 128 | 219 | 1.86e-22 | 95.9 |
| Msa0172380 | AT4G34530.1 | 68.182 | 66 | 20 | 1 | 194 | 258 | 172 | 237 | 5.43e-21 | 92.8 |
| Msa0172380 | AT3G07340.2 | 69.697 | 66 | 19 | 1 | 194 | 258 | 258 | 323 | 6.67e-21 | 93.6 |
| Msa0172380 | AT3G07340.1 | 69.697 | 66 | 19 | 1 | 194 | 258 | 258 | 323 | 7.30e-21 | 94.0 |
| Msa0172380 | AT1G68920.3 | 68.182 | 66 | 20 | 1 | 194 | 258 | 302 | 367 | 1.22e-20 | 93.2 |
| Msa0172380 | AT1G68920.1 | 68.182 | 66 | 20 | 1 | 194 | 258 | 303 | 368 | 1.22e-20 | 93.2 |
| Msa0172380 | AT1G68920.4 | 68.182 | 66 | 20 | 1 | 194 | 258 | 303 | 368 | 1.22e-20 | 93.2 |
| Msa0172380 | AT1G68920.2 | 68.182 | 66 | 20 | 1 | 194 | 258 | 303 | 368 | 1.22e-20 | 93.2 |
| Msa0172380 | AT3G23690.1 | 61.333 | 75 | 28 | 1 | 185 | 258 | 182 | 256 | 1.71e-20 | 92.0 |
| Msa0172380 | AT1G10120.2 | 66.667 | 66 | 21 | 1 | 194 | 258 | 206 | 271 | 4.58e-20 | 90.5 |
| Msa0172380 | AT1G10120.1 | 66.667 | 66 | 21 | 1 | 194 | 258 | 206 | 271 | 4.58e-20 | 90.5 |
| Msa0172380 | AT5G62610.2 | 57.333 | 75 | 31 | 1 | 185 | 258 | 144 | 218 | 6.78e-20 | 89.0 |
| Msa0172380 | AT5G62610.1 | 57.333 | 75 | 31 | 1 | 185 | 258 | 144 | 218 | 6.78e-20 | 89.0 |
| Msa0172380 | AT2G18300.1 | 65.152 | 66 | 22 | 1 | 194 | 258 | 185 | 250 | 8.90e-20 | 89.4 |
| Msa0172380 | AT2G18300.2 | 65.152 | 66 | 22 | 1 | 194 | 258 | 185 | 250 | 9.20e-20 | 89.4 |
| Msa0172380 | AT1G26260.3 | 63.636 | 66 | 23 | 1 | 194 | 258 | 172 | 237 | 1.04e-19 | 89.4 |
| Msa0172380 | AT1G26260.5 | 63.636 | 66 | 23 | 1 | 194 | 258 | 201 | 266 | 1.15e-19 | 89.7 |
| Msa0172380 | AT2G18300.3 | 65.152 | 66 | 22 | 1 | 194 | 258 | 185 | 250 | 1.22e-19 | 89.4 |
| Msa0172380 | AT4G36540.1 | 52.273 | 88 | 39 | 2 | 172 | 258 | 121 | 206 | 1.24e-19 | 88.6 |
| Msa0172380 | AT1G25330.1 | 42.308 | 130 | 60 | 4 | 186 | 314 | 96 | 211 | 1.26e-19 | 86.7 |
| Msa0172380 | AT4G36540.2 | 52.273 | 88 | 39 | 2 | 172 | 258 | 121 | 206 | 1.26e-19 | 88.6 |
| Msa0172380 | AT1G59640.1 | 65.152 | 66 | 22 | 1 | 194 | 258 | 136 | 201 | 1.28e-19 | 87.8 |
| Msa0172380 | AT1G26260.4 | 63.636 | 66 | 23 | 1 | 194 | 258 | 223 | 288 | 1.35e-19 | 89.4 |
| Msa0172380 | AT1G26260.1 | 63.636 | 66 | 23 | 1 | 194 | 258 | 223 | 288 | 1.35e-19 | 89.4 |
| Msa0172380 | AT1G26260.6 | 63.636 | 66 | 23 | 1 | 194 | 258 | 223 | 288 | 1.35e-19 | 89.4 |
| Msa0172380 | AT1G26260.2 | 63.636 | 66 | 23 | 1 | 194 | 258 | 223 | 288 | 1.35e-19 | 89.4 |
| Msa0172380 | AT2G42300.1 | 44.737 | 114 | 58 | 3 | 194 | 303 | 185 | 297 | 3.58e-19 | 87.4 |
| Msa0172380 | AT1G59640.2 | 65.152 | 66 | 22 | 1 | 194 | 258 | 136 | 201 | 4.40e-19 | 87.4 |
| Msa0172380 | AT1G73830.2 | 52.809 | 89 | 38 | 3 | 194 | 281 | 147 | 232 | 1.12e-18 | 85.1 |
| Msa0172380 | AT1G73830.1 | 52.809 | 89 | 38 | 3 | 194 | 281 | 147 | 232 | 1.18e-18 | 85.1 |
| Msa0172380 | AT3G57800.2 | 47.619 | 105 | 49 | 3 | 194 | 293 | 204 | 307 | 6.63e-18 | 84.3 |
| Msa0172380 | AT1G27740.1 | 45.833 | 96 | 46 | 1 | 173 | 268 | 152 | 241 | 1.26e-17 | 82.0 |
| Msa0172380 | AT2G20180.7 | 56.452 | 62 | 27 | 0 | 197 | 258 | 210 | 271 | 2.10e-17 | 83.2 |
| Msa0172380 | AT2G20180.1 | 56.452 | 62 | 27 | 0 | 197 | 258 | 210 | 271 | 2.10e-17 | 83.2 |
| Msa0172380 | AT2G20180.5 | 56.452 | 62 | 27 | 0 | 197 | 258 | 210 | 271 | 2.10e-17 | 83.2 |
| Msa0172380 | AT4G33880.1 | 48.837 | 86 | 44 | 0 | 193 | 278 | 265 | 350 | 2.51e-17 | 82.4 |
| Msa0172380 | AT2G20180.4 | 55.556 | 63 | 28 | 0 | 196 | 258 | 280 | 342 | 2.97e-17 | 83.2 |
| Msa0172380 | AT2G20180.6 | 55.556 | 63 | 28 | 0 | 196 | 258 | 280 | 342 | 2.97e-17 | 83.2 |
| Msa0172380 | AT2G20180.2 | 55.556 | 63 | 28 | 0 | 196 | 258 | 280 | 342 | 2.97e-17 | 83.2 |
| Msa0172380 | AT2G20180.3 | 55.556 | 63 | 28 | 0 | 196 | 258 | 280 | 342 | 2.97e-17 | 83.2 |
| Msa0172380 | AT1G18400.2 | 55.405 | 74 | 31 | 2 | 194 | 266 | 145 | 217 | 3.27e-17 | 80.5 |
| Msa0172380 | AT2G14760.1 | 50.000 | 82 | 41 | 0 | 193 | 274 | 236 | 317 | 4.59e-17 | 81.6 |
| Msa0172380 | AT1G18400.1 | 54.667 | 75 | 32 | 2 | 194 | 267 | 145 | 218 | 7.81e-17 | 79.7 |
| Msa0172380 | AT1G09530.3 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT1G09530.2 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT1G09530.5 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT1G09530.1 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT1G09530.4 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT1G09530.6 | 51.562 | 64 | 31 | 0 | 196 | 259 | 339 | 402 | 8.75e-17 | 82.0 |
| Msa0172380 | AT2G42300.4 | 62.121 | 66 | 24 | 1 | 194 | 258 | 185 | 250 | 1.07e-16 | 79.7 |
| Msa0172380 | AT2G42280.1 | 56.522 | 69 | 29 | 1 | 193 | 260 | 278 | 346 | 1.54e-16 | 80.5 |
| Msa0172380 | AT2G20180.8 | 56.667 | 60 | 26 | 0 | 196 | 255 | 280 | 339 | 2.61e-16 | 79.3 |
| Msa0172380 | AT5G43175.1 | 46.250 | 80 | 43 | 0 | 189 | 268 | 127 | 206 | 3.56e-16 | 77.0 |
| Msa0172380 | AT4G09180.1 | 57.576 | 66 | 27 | 1 | 193 | 257 | 183 | 248 | 4.53e-16 | 77.8 |
| Msa0172380 | AT1G35460.1 | 57.576 | 66 | 27 | 1 | 193 | 257 | 180 | 245 | 8.63e-16 | 76.6 |
| Msa0172380 | AT2G42280.3 | 59.375 | 64 | 25 | 1 | 193 | 255 | 278 | 341 | 1.19e-15 | 77.8 |
| Msa0172380 | AT1G51140.1 | 55.072 | 69 | 30 | 1 | 193 | 260 | 303 | 371 | 8.21e-15 | 75.5 |
| Msa0172380 | AT2G14760.3 | 46.067 | 89 | 35 | 1 | 193 | 268 | 236 | 324 | 9.35e-15 | 74.7 |
| Msa0172380 | AT4G36930.1 | 55.932 | 59 | 26 | 0 | 200 | 258 | 197 | 255 | 1.31e-14 | 74.7 |
| Msa0172380 | AT5G67110.1 | 42.529 | 87 | 48 | 1 | 189 | 275 | 82 | 166 | 1.80e-14 | 72.0 |
| Msa0172380 | AT4G00050.2 | 47.826 | 69 | 36 | 0 | 189 | 257 | 100 | 168 | 4.56e-14 | 72.4 |
| Msa0172380 | AT1G66470.1 | 53.226 | 62 | 29 | 0 | 203 | 264 | 204 | 265 | 7.11e-14 | 71.6 |
| Msa0172380 | AT5G37800.1 | 46.667 | 75 | 37 | 1 | 190 | 264 | 200 | 271 | 7.52e-14 | 72.0 |
| Msa0172380 | AT4G00050.1 | 47.826 | 69 | 36 | 0 | 189 | 257 | 202 | 270 | 1.04e-13 | 72.0 |
| Msa0172380 | AT4G28815.2 | 49.123 | 57 | 29 | 0 | 197 | 253 | 71 | 127 | 1.10e-13 | 70.1 |
| Msa0172380 | AT4G00050.3 | 47.826 | 69 | 36 | 0 | 189 | 257 | 202 | 270 | 1.19e-13 | 72.0 |
| Msa0172380 | AT3G21330.1 | 57.143 | 56 | 24 | 0 | 201 | 256 | 276 | 331 | 1.41e-13 | 71.6 |
| Msa0172380 | AT4G28790.1 | 45.588 | 68 | 37 | 0 | 191 | 258 | 268 | 335 | 2.49e-13 | 71.2 |
| Msa0172380 | AT4G28815.1 | 49.123 | 57 | 29 | 0 | 197 | 253 | 147 | 203 | 3.81e-13 | 69.7 |
| Msa0172380 | AT2G43010.2 | 58.333 | 60 | 25 | 0 | 197 | 256 | 254 | 313 | 9.76e-13 | 69.3 |
| Msa0172380 | AT2G43010.1 | 58.333 | 60 | 25 | 0 | 197 | 256 | 254 | 313 | 1.00e-12 | 69.3 |
| Msa0172380 | AT2G43010.3 | 58.333 | 60 | 25 | 0 | 197 | 256 | 261 | 320 | 1.06e-12 | 69.3 |
| Msa0172380 | AT2G43010.4 | 58.333 | 60 | 25 | 0 | 197 | 256 | 254 | 313 | 1.29e-12 | 68.9 |
| Msa0172380 | AT3G59060.3 | 53.968 | 63 | 29 | 0 | 196 | 258 | 252 | 314 | 1.32e-12 | 68.9 |
| Msa0172380 | AT3G59060.2 | 53.968 | 63 | 29 | 0 | 196 | 258 | 252 | 314 | 1.32e-12 | 68.9 |
| Msa0172380 | AT3G59060.4 | 53.968 | 63 | 29 | 0 | 196 | 258 | 252 | 314 | 1.32e-12 | 68.9 |
| Msa0172380 | AT3G59060.1 | 53.968 | 63 | 29 | 0 | 196 | 258 | 252 | 314 | 1.38e-12 | 68.9 |
| Msa0172380 | AT2G43010.5 | 58.333 | 60 | 25 | 0 | 197 | 256 | 296 | 355 | 1.42e-12 | 68.9 |
| Msa0172380 | AT5G01305.1 | 47.692 | 65 | 34 | 0 | 189 | 253 | 32 | 96 | 1.47e-12 | 65.9 |
| Msa0172380 | AT4G28800.1 | 40.000 | 80 | 43 | 1 | 197 | 271 | 252 | 331 | 2.08e-12 | 68.6 |
| Msa0172380 | AT2G43140.1 | 55.385 | 65 | 28 | 1 | 193 | 256 | 133 | 197 | 2.47e-12 | 65.9 |
| Msa0172380 | AT2G43140.2 | 55.385 | 65 | 28 | 1 | 193 | 256 | 230 | 294 | 2.48e-12 | 67.4 |
| Msa0172380 | AT4G28800.2 | 41.333 | 75 | 43 | 1 | 197 | 271 | 264 | 337 | 4.59e-12 | 67.4 |
| Msa0172380 | AT4G28790.2 | 45.312 | 64 | 35 | 0 | 191 | 254 | 268 | 331 | 4.97e-12 | 66.6 |
| Msa0172380 | AT2G46970.2 | 42.857 | 63 | 36 | 0 | 196 | 258 | 194 | 256 | 7.41e-12 | 66.6 |
| Msa0172380 | AT2G46970.3 | 42.857 | 63 | 36 | 0 | 196 | 258 | 203 | 265 | 8.07e-12 | 66.2 |
| Msa0172380 | AT2G46970.1 | 42.857 | 63 | 36 | 0 | 196 | 258 | 225 | 287 | 8.11e-12 | 66.6 |
| Msa0172380 | AT4G00120.1 | 46.429 | 56 | 30 | 0 | 201 | 256 | 119 | 174 | 9.06e-11 | 61.2 |
Find 137 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATGGAATAGAATTTA+TGG | 0.168347 | 1_4:-57400496 | None:intergenic |
| CTTAATTAGAAGATTGATTA+TGG | 0.191327 | 1_4:-57400436 | None:intergenic |
| ATGATGATTGTTGTTATTAT+TGG | 0.222076 | 1_4:-57400951 | None:intergenic |
| ACCACTTCGCCCAGGCTTGC+TGG | 0.236946 | 1_4:-57405109 | None:intergenic |
| AATGCCTTTAGGGTTGAATT+TGG | 0.237625 | 1_4:+57400844 | Msa0172380:CDS |
| TTTGTAATGTATCATGTATT+TGG | 0.238037 | 1_4:+57405838 | Msa0172380:three_prime_UTR |
| TTGATGGTGAAGGTGGAGTT+GGG | 0.241976 | 1_4:-57402051 | None:intergenic |
| TATGTGTGGTTGTTTGATTC+AGG | 0.263977 | 1_4:-57405290 | None:intergenic |
| TGAAGGTGGAGTTGGGGTTG+AGG | 0.267425 | 1_4:-57402044 | None:intergenic |
| CCAACCCCACCATAGATATT+TGG | 0.289359 | 1_4:-57405708 | None:intergenic |
| CCTGAGAACGGAGTTGGATA+TGG | 0.291944 | 1_4:+57400752 | Msa0172380:CDS |
| GAGGAGGAATAATGCCTTTA+GGG | 0.312263 | 1_4:+57400834 | Msa0172380:CDS |
| GGAGGAGGAATAATGCCTTT+AGG | 0.319681 | 1_4:+57400833 | Msa0172380:CDS |
| AAATGCTGCAGTATTGAAAA+AGG | 0.327368 | 1_4:+57400611 | Msa0172380:five_prime_UTR |
| GAAGGTGGAGTTGGGGTTGA+GGG | 0.328479 | 1_4:-57402043 | None:intergenic |
| TCACCATGACAATGACATAC+TGG | 0.333416 | 1_4:-57405645 | None:intergenic |
| TTGAGAGGAGGTGGAGGAGG+AGG | 0.338901 | 1_4:+57400815 | Msa0172380:CDS |
| GGAAAGTGGGGACATTTAAA+AGG | 0.339902 | 1_4:+57405803 | Msa0172380:three_prime_UTR |
| GTTGATGGTGAAGGTGGAGT+TGG | 0.345670 | 1_4:-57402052 | None:intergenic |
| GCAGTAACAGACGCTGGATT+TGG | 0.346934 | 1_4:-57404093 | None:intergenic |
| AGAGGAGGTGGAGGAGGAGG+AGG | 0.354597 | 1_4:+57400818 | Msa0172380:CDS |
| CAGACGCTGGATTTGGTTGC+TGG | 0.356776 | 1_4:-57404086 | None:intergenic |
| TCTTTGAGAGGAGGTGGAGG+AGG | 0.361753 | 1_4:+57400812 | Msa0172380:CDS |
| TTCTTCACCTTCTTCTACTC+CGG | 0.363218 | 1_4:+57401027 | Msa0172380:CDS |
| ATTGCTGATGCTAGAGATAT+AGG | 0.364284 | 1_4:-57405227 | None:intergenic |
| TGAAAAGTAGGGAGAAATAT+TGG | 0.368917 | 1_4:-57405375 | None:intergenic |
| AGGTGGAGTTGGGGTTGAGG+GGG | 0.372241 | 1_4:-57402041 | None:intergenic |
| GTGGAACCAACCAGCAAGCC+TGG | 0.378933 | 1_4:+57405099 | Msa0172380:CDS |
| GTTCCTTAGGCTCCAAGTTA+AGG | 0.387394 | 1_4:+57404518 | Msa0172380:CDS |
| GGTAATTGTTCAGAAGGATT+AGG | 0.387856 | 1_4:+57400698 | Msa0172380:CDS |
| ACAACAGGTGGCTAAACTTA+TGG | 0.388576 | 1_4:+57405148 | Msa0172380:CDS |
| AAGGTGGAGTTGGGGTTGAG+GGG | 0.394729 | 1_4:-57402042 | None:intergenic |
| TTGATTATGTGAAGTTCCTT+AGG | 0.396018 | 1_4:+57404505 | Msa0172380:CDS |
| ACCACCAACCTTGTTGATGC+TGG | 0.396309 | 1_4:-57404333 | None:intergenic |
| GGTTCTTTGAGAGGAGGTGG+AGG | 0.400561 | 1_4:+57400809 | Msa0172380:CDS |
| TGAAAGAATGAAAGCATTGC+AGG | 0.405094 | 1_4:+57404301 | Msa0172380:CDS |
| TGCTCCAAATTCAACCCTAA+AGG | 0.411905 | 1_4:-57400848 | None:intergenic |
| AATATCTATGGTGGGGTTGG+TGG | 0.417180 | 1_4:+57405711 | Msa0172380:three_prime_UTR |
| GAAACCCTAGGACCTGAAAA+TGG | 0.417764 | 1_4:-57400510 | None:intergenic |
| TGGATATATATGTCAGAATC+AGG | 0.421437 | 1_4:-57405532 | None:intergenic |
| ATGATACCTGTTGGTGTTGA+TGG | 0.423246 | 1_4:-57402067 | None:intergenic |
| TATCACCTCCACTGCAGAAA+CGG | 0.427521 | 1_4:-57404901 | None:intergenic |
| GAAAATGGAATAGAATTTAT+GGG | 0.428704 | 1_4:-57400495 | None:intergenic |
| AAAATCATCATGGGTTTCTC+AGG | 0.434914 | 1_4:+57400870 | Msa0172380:CDS |
| TAATTAACCTTATGAAAAGT+AGG | 0.436651 | 1_4:-57405387 | None:intergenic |
| GTGAGTGAGAAGTGTGAGAA+TGG | 0.443758 | 1_4:-57400390 | None:intergenic |
| CTTCGCCCAGGCTTGCTGGT+TGG | 0.445620 | 1_4:-57405105 | None:intergenic |
| ATCACCTCCACTGCAGAAAC+GGG | 0.449434 | 1_4:-57404900 | None:intergenic |
| CTGAGAACGGAGTTGGATAT+GGG | 0.449903 | 1_4:+57400753 | Msa0172380:CDS |
| GGTGGTTCTTTGAGAGGAGG+TGG | 0.450799 | 1_4:+57400806 | Msa0172380:CDS |
| TTCCTCCAAATATCTATGGT+GGG | 0.458473 | 1_4:+57405703 | Msa0172380:three_prime_UTR |
| GGACGGATGCCAGGTGGTTG+TGG | 0.459379 | 1_4:-57404120 | None:intergenic |
| CCAAATATCTATGGTGGGGT+TGG | 0.459732 | 1_4:+57405708 | Msa0172380:three_prime_UTR |
| TCCTCCAAATATCTATGGTG+GGG | 0.472491 | 1_4:+57405704 | Msa0172380:three_prime_UTR |
| CTGATAATAAGTGAAATTAG+AGG | 0.473396 | 1_4:+57405619 | Msa0172380:three_prime_UTR |
| GAACGATGGAACAGAACAAC+AGG | 0.478771 | 1_4:+57405133 | Msa0172380:CDS |
| CCATATCCAACTCCGTTCTC+AGG | 0.480601 | 1_4:-57400752 | None:intergenic |
| CCTTCACCATCAACACCAAC+AGG | 0.485299 | 1_4:+57402061 | Msa0172380:CDS |
| AGGCATTATGCAAAGTGCCT+TGG | 0.488843 | 1_4:-57405207 | None:intergenic |
| GATAACGTTGTTGATGTTGA+AGG | 0.491085 | 1_4:+57400920 | Msa0172380:CDS |
| ATGAGTAGACTTGGTGGAGC+TGG | 0.497941 | 1_4:+57404849 | Msa0172380:CDS |
| TACCCGCTCAGCAATGCTGT+GGG | 0.498183 | 1_4:-57404178 | None:intergenic |
| CGCACTCGAGGACGGATGCC+AGG | 0.498354 | 1_4:-57404129 | None:intergenic |
| GATTGGAGCATGGGGCGTAC+AGG | 0.498420 | 1_4:-57402014 | None:intergenic |
| TGAAAACATACAGTGATTCC+CGG | 0.501076 | 1_4:-57401046 | None:intergenic |
| AATTTGGAGCAAAATCATCA+TGG | 0.505233 | 1_4:+57400860 | Msa0172380:CDS |
| ATACCTTAACTTGGAGCCTA+AGG | 0.506615 | 1_4:-57404521 | None:intergenic |
| CAATTGGGGTCCACACCTCA+TGG | 0.512972 | 1_4:+57400785 | Msa0172380:CDS |
| GCAGTGCCTGAGAACGGAGT+TGG | 0.513102 | 1_4:+57400746 | Msa0172380:CDS |
| CACCATGACAATGACATACT+GGG | 0.516631 | 1_4:-57405644 | None:intergenic |
| ATCGTTCGACCACTTCGCCC+AGG | 0.518825 | 1_4:-57405117 | None:intergenic |
| TTCTTGCTCGCACTCGAGGA+CGG | 0.520681 | 1_4:-57404137 | None:intergenic |
| TTTCCTCCAAATATCTATGG+TGG | 0.524034 | 1_4:+57405702 | Msa0172380:three_prime_UTR |
| CCACCAACCTTGTTGATGCT+GGG | 0.525257 | 1_4:-57404332 | None:intergenic |
| GAGAAGTGTGAGAATGGAGA+AGG | 0.527335 | 1_4:-57400384 | None:intergenic |
| TCTTCACCTTCTTCTACTCC+GGG | 0.529181 | 1_4:+57401028 | Msa0172380:CDS |
| TCTATACACATACCTTAACT+TGG | 0.530306 | 1_4:-57404530 | None:intergenic |
| AAAAGAATCTTAGACATGGC+TGG | 0.533331 | 1_4:+57400677 | Msa0172380:exon |
| GCAAATTTATGTCAAGTTTG+TGG | 0.534899 | 1_4:-57405351 | None:intergenic |
| ATGGCTGGTAATTGTTCAGA+AGG | 0.538081 | 1_4:+57400692 | Msa0172380:CDS |
| ATTTGGAGCAAAATCATCAT+GGG | 0.540073 | 1_4:+57400861 | Msa0172380:CDS |
| CCCGCTCAGCAATGCTGTGG+GGG | 0.544277 | 1_4:-57404176 | None:intergenic |
| GTCTTGAGCATGAGTAGACT+TGG | 0.551854 | 1_4:+57404840 | Msa0172380:CDS |
| GTGGGGACATTTAAAAGGAA+AGG | 0.551964 | 1_4:+57405808 | Msa0172380:three_prime_UTR |
| TGATGGTGAAGGTGGAGTTG+GGG | 0.553141 | 1_4:-57402050 | None:intergenic |
| CATGGTGGTTCTTTGAGAGG+AGG | 0.554634 | 1_4:+57400803 | Msa0172380:CDS |
| GGTTTCACACACACCACGTA+CGG | 0.555224 | 1_4:+57400527 | Msa0172380:five_prime_UTR |
| CCTCGAGTGCGAGCAAGAAG+AGG | 0.556095 | 1_4:+57404141 | Msa0172380:CDS |
| AATTAACCTTATGAAAAGTA+GGG | 0.556762 | 1_4:-57405386 | None:intergenic |
| CCTCTTCTTGCTCGCACTCG+AGG | 0.556798 | 1_4:-57404141 | None:intergenic |
| TGGAACCAACCAGCAAGCCT+GGG | 0.559582 | 1_4:+57405100 | Msa0172380:CDS |
| TTTGTAGCTTTGCAAAATCA+CGG | 0.562726 | 1_4:-57405478 | None:intergenic |
| TTGAGCATGAGTAGACTTGG+TGG | 0.564283 | 1_4:+57404843 | Msa0172380:CDS |
| TGATGTTCCCGTTTCTGCAG+TGG | 0.567967 | 1_4:+57404893 | Msa0172380:CDS |
| GTGATTCCCGGAGTAGAAGA+AGG | 0.573165 | 1_4:-57401034 | None:intergenic |
| CCTCATGGTGGTTCTTTGAG+AGG | 0.573318 | 1_4:+57400800 | Msa0172380:CDS |
| GGGGTTGAGATTGGAGCATG+GGG | 0.575204 | 1_4:-57402022 | None:intergenic |
| ACCAGCAAGCCTGGGCGAAG+TGG | 0.578504 | 1_4:+57405108 | Msa0172380:CDS |
| AAACTTATGGAGGAAGATGT+TGG | 0.580007 | 1_4:+57405161 | Msa0172380:CDS |
| AGAGAGAAAGAGATGAGTGG+TGG | 0.581534 | 1_4:-57400358 | None:intergenic |
| ACTGCCATGCCACAACCACC+TGG | 0.582186 | 1_4:+57404111 | Msa0172380:CDS |
| GATGCCAGGTGGTTGTGGCA+TGG | 0.582703 | 1_4:-57404115 | None:intergenic |
| ACCCCACCATAGATATTTGG+AGG | 0.584289 | 1_4:-57405705 | None:intergenic |
| ATCTTAGCAGTGCCTGAGAA+CGG | 0.585394 | 1_4:+57400740 | Msa0172380:CDS |
| GTTGGTGTTGATGGTGAAGG+TGG | 0.585457 | 1_4:-57402058 | None:intergenic |
| TTACCCGCTCAGCAATGCTG+TGG | 0.587723 | 1_4:-57404179 | None:intergenic |
| TATTATAGAGAAGAACAAAA+CGG | 0.589619 | 1_4:-57400200 | None:intergenic |
| ACCCGCTCAGCAATGCTGTG+GGG | 0.594692 | 1_4:-57404177 | None:intergenic |
| CCTGTTGGTGTTGATGGTGA+AGG | 0.596677 | 1_4:-57402061 | None:intergenic |
| AGGTGAAGAAGTGATATTGT+TGG | 0.604742 | 1_4:-57401014 | None:intergenic |
| CGTACAGGTTGAGCATGAGT+AGG | 0.607775 | 1_4:-57401999 | None:intergenic |
| CAAAGAACCACCATGAGGTG+TGG | 0.610161 | 1_4:-57400795 | None:intergenic |
| TGGGCGAAGTGGTCGAACGA+TGG | 0.612445 | 1_4:+57405119 | Msa0172380:CDS |
| TATGCAACTTCTTCAATCCA+AGG | 0.620224 | 1_4:+57405190 | Msa0172380:CDS |
| CGTGGTGTGTGTGAAACCCT+AGG | 0.621190 | 1_4:-57400522 | None:intergenic |
| AGCCCAGTATGTCATTGTCA+TGG | 0.623507 | 1_4:+57405642 | Msa0172380:three_prime_UTR |
| AGAAGAGAGAAAGAGATGAG+TGG | 0.629836 | 1_4:-57400361 | None:intergenic |
| ATTGTTGATGAGTCTGATTG+AGG | 0.631316 | 1_4:-57405260 | None:intergenic |
| ATTAGTTCCCAGCATCAACA+AGG | 0.633940 | 1_4:+57404325 | Msa0172380:CDS |
| AGAAAATGGTGAGTGCGCTA+TGG | 0.640156 | 1_4:-57400304 | None:intergenic |
| GGCAGCATCAAGATGCAACA+CGG | 0.647342 | 1_4:+57400891 | Msa0172380:CDS |
| TGAGAACGGAGTTGGATATG+GGG | 0.647846 | 1_4:+57400754 | Msa0172380:CDS |
| TAGGAGTAACATTCTATGTG+TGG | 0.651108 | 1_4:-57405304 | None:intergenic |
| ACAGGTGGCTAAACTTATGG+AGG | 0.655666 | 1_4:+57405151 | Msa0172380:CDS |
| GGCATGGCAGTAACAGACGC+TGG | 0.657355 | 1_4:-57404099 | None:intergenic |
| TGTTCCCGTTTCTGCAGTGG+AGG | 0.663300 | 1_4:+57404896 | Msa0172380:CDS |
| AGTATATGTTGGTATCACAC+TGG | 0.663341 | 1_4:+57405431 | Msa0172380:three_prime_UTR |
| ATAGGGATTCGATGCAGATG+AGG | 0.663897 | 1_4:+57401943 | Msa0172380:CDS |
| GAGAACGGAGTTGGATATGG+GGG | 0.672184 | 1_4:+57400755 | Msa0172380:CDS |
| CGATGGAACAGAACAACAGG+TGG | 0.676651 | 1_4:+57405136 | Msa0172380:CDS |
| AAAGAAAAGAATCTTAGACA+TGG | 0.683086 | 1_4:+57400673 | Msa0172380:exon |
| TTGGGGTCCACACCTCATGG+TGG | 0.687439 | 1_4:+57400788 | Msa0172380:CDS |
| ACTCGAGGACGGATGCCAGG+TGG | 0.696377 | 1_4:-57404126 | None:intergenic |
| CCTCTCAAAGAACCACCATG+AGG | 0.722555 | 1_4:-57400800 | None:intergenic |
| AATTACATCTGGTATCACGG+TGG | 0.729558 | 1_4:-57405552 | None:intergenic |
| GTAGCTTTGCAAAATCACGG+TGG | 0.732276 | 1_4:-57405475 | None:intergenic |
| GTGGTTGTAGACTGACAAAG+CGG | 0.742255 | 1_4:+57404464 | Msa0172380:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATAAAATATATAT+TGG | + | chr1_4:57401702-57401721 | Msa0172380:intron | 0.0% |
| !! | AAAAATAATTAAAAAATTAT+AGG | - | chr1_4:57403097-57403116 | None:intergenic | 0.0% |
| !! | TTATAAATATAATTATATAT+AGG | - | chr1_4:57404407-57404426 | None:intergenic | 0.0% |
| !! | AAAAAAGCTATATATATTAA+GGG | + | chr1_4:57401677-57401696 | Msa0172380:intron | 10.0% |
| !!! | ATAATATTTTGTCTTTATAT+AGG | - | chr1_4:57402346-57402365 | None:intergenic | 10.0% |
| !!! | AAATTAACTAACATTTTAAA+AGG | - | chr1_4:57402708-57402727 | None:intergenic | 10.0% |
| !!! | AGAATATTATTAGTTTTTTT+TGG | - | chr1_4:57402837-57402856 | None:intergenic | 10.0% |
| !! | TATTTATTGTAAAATGAAAT+TGG | + | chr1_4:57402861-57402880 | Msa0172380:intron | 10.0% |
| !!! | AAAATACATTTTTTTTTTTC+CGG | + | chr1_4:57403621-57403640 | Msa0172380:intron | 10.0% |
| !! | ATTTGATATTACAAAAATAT+AGG | + | chr1_4:57403974-57403993 | Msa0172380:intron | 10.0% |
| !! | AAAATATGAATCAAATTAAA+TGG | - | chr1_4:57404813-57404832 | None:intergenic | 10.0% |
| !! | AATAAAATGTAATAGAAAAG+TGG | - | chr1_4:57401539-57401558 | None:intergenic | 15.0% |
| !! | GAAAAAAGCTATATATATTA+AGG | + | chr1_4:57401676-57401695 | Msa0172380:intron | 15.0% |
| !!! | TTATGTAATTTGAAGTTATA+TGG | + | chr1_4:57401905-57401924 | Msa0172380:intron | 15.0% |
| !! | TAGTATAATAGATAAATGAT+TGG | - | chr1_4:57402167-57402186 | None:intergenic | 15.0% |
| !! | TATATATTATTAAGATGAGA+AGG | - | chr1_4:57402257-57402276 | None:intergenic | 15.0% |
| !! | TTATAAAATGAATGAATGAA+CGG | - | chr1_4:57402457-57402476 | None:intergenic | 15.0% |
| !! | AATAAAATATACATAAGCTA+AGG | + | chr1_4:57402481-57402500 | Msa0172380:intron | 15.0% |
| !! | ATCCCAATATTTAATAATTA+AGG | + | chr1_4:57402504-57402523 | Msa0172380:intron | 15.0% |
| !! | TCCCAATATTTAATAATTAA+GGG | + | chr1_4:57402505-57402524 | Msa0172380:intron | 15.0% |
| !! | TCCCTTAATTATTAAATATT+GGG | - | chr1_4:57402509-57402528 | None:intergenic | 15.0% |
| !! | ATCCCTTAATTATTAAATAT+TGG | - | chr1_4:57402510-57402529 | None:intergenic | 15.0% |
| !! | AAAAGAATATGAAGTAAAAA+TGG | - | chr1_4:57404976-57404995 | None:intergenic | 15.0% |
| !! | GTGTAGATAAAATAAAAATA+TGG | - | chr1_4:57405001-57405020 | None:intergenic | 15.0% |
| !!! | ATTTTAATTGTAGTATATGT+TGG | + | chr1_4:57405420-57405439 | Msa0172380:three_prime_UTR | 15.0% |
| !! | AAGAAAAAAAAAATTACATC+TGG | - | chr1_4:57405566-57405585 | None:intergenic | 15.0% |
| !!! | CCACTAAAAATAAAATATTT+TGG | - | chr1_4:57405744-57405763 | None:intergenic | 15.0% |
| !!! | CCAAAATATTTTATTTTTAG+TGG | + | chr1_4:57405741-57405760 | Msa0172380:three_prime_UTR | 15.0% |
| !! | TATTATAGAGAAGAACAAAA+CGG | - | chr1_4:57400203-57400222 | None:intergenic | 20.0% |
| !! | CTTAATTAGAAGATTGATTA+TGG | - | chr1_4:57400439-57400458 | None:intergenic | 20.0% |
| !! | AAACAAAACAAAAACATTCT+TGG | + | chr1_4:57400464-57400483 | Msa0172380:five_prime_UTR | 20.0% |
| !! | AACAAAACAAAAACATTCTT+GGG | + | chr1_4:57400465-57400484 | Msa0172380:five_prime_UTR | 20.0% |
| !! | GAAAATGGAATAGAATTTAT+GGG | - | chr1_4:57400498-57400517 | None:intergenic | 20.0% |
| !! | TGAAAATGGAATAGAATTTA+TGG | - | chr1_4:57400499-57400518 | None:intergenic | 20.0% |
| !!! | ATAAATTCTATTCCATTTTC+AGG | + | chr1_4:57400498-57400517 | Msa0172380:five_prime_UTR | 20.0% |
| !!! | ATGATGATTGTTGTTATTAT+TGG | - | chr1_4:57400954-57400973 | None:intergenic | 20.0% |
| !!! | AAAGAGAGTATTGTTATTTA+TGG | + | chr1_4:57401880-57401899 | Msa0172380:intron | 20.0% |
| !! | ATGATAAAGATAATGTCAAA+AGG | + | chr1_4:57402202-57402221 | Msa0172380:intron | 20.0% |
| !! | TGATAAAGATAATGTCAAAA+GGG | + | chr1_4:57402203-57402222 | Msa0172380:intron | 20.0% |
| !!! | TTTTGTCTTTATATAGGTTT+AGG | - | chr1_4:57402340-57402359 | None:intergenic | 20.0% |
| !! | CTTAAATATTAATCATCAAG+AGG | - | chr1_4:57402420-57402439 | None:intergenic | 20.0% |
| !! | TGTTAATTTCAATTCTTCAA+GGG | + | chr1_4:57402628-57402647 | Msa0172380:intron | 20.0% |
| !!! | TATTTTCATTTGCAGAATTA+CGG | + | chr1_4:57402654-57402673 | Msa0172380:intron | 20.0% |
| !!! | TAACATTTTAAAAGGAATTG+GGG | - | chr1_4:57402700-57402719 | None:intergenic | 20.0% |
| !!! | CTAACATTTTAAAAGGAATT+GGG | - | chr1_4:57402701-57402720 | None:intergenic | 20.0% |
| !!! | ACTAACATTTTAAAAGGAAT+TGG | - | chr1_4:57402702-57402721 | None:intergenic | 20.0% |
| !!! | ACTAAGTTTTTTTTTTCTGA+AGG | - | chr1_4:57402810-57402829 | None:intergenic | 20.0% |
| !!! | CATTTGATGTCATTTATATT+TGG | - | chr1_4:57403046-57403065 | None:intergenic | 20.0% |
| !! | AATATAAATGACATCAAATG+TGG | + | chr1_4:57403046-57403065 | Msa0172380:intron | 20.0% |
| !! | ATATAAATGACATCAAATGT+GGG | + | chr1_4:57403047-57403066 | Msa0172380:intron | 20.0% |
| !! | TTGAGTATTATAAGAAAGAA+TGG | - | chr1_4:57403892-57403911 | None:intergenic | 20.0% |
| !! | TGTTTAATATTATGAAACTG+TGG | + | chr1_4:57404445-57404464 | Msa0172380:intron | 20.0% |
| !! | CTATTTCAAAATGAATTTCA+AGG | - | chr1_4:57404601-57404620 | None:intergenic | 20.0% |
| !!! | TTTGAAATAGAAGTAATTGA+AGG | + | chr1_4:57404611-57404630 | Msa0172380:intron | 20.0% |
| !! | TTGAAATAGAAGTAATTGAA+GGG | + | chr1_4:57404612-57404631 | Msa0172380:intron | 20.0% |
| !!! | TTTGATTCATATTTTGAAAC+AGG | + | chr1_4:57404818-57404837 | Msa0172380:intron | 20.0% |
| !! | TTCAAATTTATAAATGGTTC+AGG | - | chr1_4:57404943-57404962 | None:intergenic | 20.0% |
| !!! | GGCATTTTCAAATTTATAAA+TGG | - | chr1_4:57404949-57404968 | None:intergenic | 20.0% |
| !! | AATTAACCTTATGAAAAGTA+GGG | - | chr1_4:57405389-57405408 | None:intergenic | 20.0% |
| !! | TAATTAACCTTATGAAAAGT+AGG | - | chr1_4:57405390-57405409 | None:intergenic | 20.0% |
| !!! | GTATAACTTTTGAAAAATCA+CGG | + | chr1_4:57405501-57405520 | Msa0172380:three_prime_UTR | 20.0% |
| !! | TTTGTAATGTATCATGTATT+TGG | + | chr1_4:57405838-57405857 | Msa0172380:three_prime_UTR | 20.0% |
| !!! | CTTGTATTTCTTTAGTTTTG+CGG | + | chr1_4:57400238-57400257 | Msa0172380:five_prime_UTR | 25.0% |
| !!! | TTGTATTTCTTTAGTTTTGC+GGG | + | chr1_4:57400239-57400258 | Msa0172380:five_prime_UTR | 25.0% |
| !!! | TTTTTGTTGTTCTGAGAAAA+TGG | - | chr1_4:57400321-57400340 | None:intergenic | 25.0% |
| ! | AAATAGAAAACACAAAAAGC+AGG | - | chr1_4:57400572-57400591 | None:intergenic | 25.0% |
| !!! | ATTCTTTTCTTTTTTCAGCT+AGG | - | chr1_4:57400665-57400684 | None:intergenic | 25.0% |
| ! | AAAGAAAAGAATCTTAGACA+TGG | + | chr1_4:57400673-57400692 | Msa0172380:exon | 25.0% |
| ! | GTCTATATATGTGCTTTATA+GGG | - | chr1_4:57401101-57401120 | None:intergenic | 25.0% |
| ! | TGTCTATATATGTGCTTTAT+AGG | - | chr1_4:57401102-57401121 | None:intergenic | 25.0% |
| ! | GAGAAATAATTTATGAAGCA+CGG | - | chr1_4:57401271-57401290 | None:intergenic | 25.0% |
| ! | ATTAATCCTGAATCATATCT+TGG | + | chr1_4:57401389-57401408 | Msa0172380:intron | 25.0% |
| !! | ATAACCAAAACCAAATGTTT+TGG | - | chr1_4:57401493-57401512 | None:intergenic | 25.0% |
| !!! | TGGTTTTGGTTATTGTTATT+AGG | + | chr1_4:57401500-57401519 | Msa0172380:intron | 25.0% |
| ! | ATAGAAAATTATATCGCTCA+AGG | + | chr1_4:57401849-57401868 | Msa0172380:intron | 25.0% |
| ! | ATATTAATGATGATACCTGT+TGG | - | chr1_4:57402079-57402098 | None:intergenic | 25.0% |
| ! | GATAAATGATTGGAAAATGA+GGG | - | chr1_4:57402157-57402176 | None:intergenic | 25.0% |
| ! | AGATAAATGATTGGAAAATG+AGG | - | chr1_4:57402158-57402177 | None:intergenic | 25.0% |
| !! | CTTTTCTTTATGCTTTGTAA+AGG | - | chr1_4:57402394-57402413 | None:intergenic | 25.0% |
| ! | GTGTTAATTTCAATTCTTCA+AGG | + | chr1_4:57402627-57402646 | Msa0172380:intron | 25.0% |
| !! | ATTTTCATTTGCAGAATTAC+GGG | + | chr1_4:57402655-57402674 | Msa0172380:intron | 25.0% |
| !!! | AACATTTTAAAAGGAATTGG+GGG | - | chr1_4:57402699-57402718 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTTTTCTGAAGGA+TGG | - | chr1_4:57402806-57402825 | None:intergenic | 25.0% |
| ! | TCTATAGTAATAGACAAGTA+AGG | + | chr1_4:57402887-57402906 | Msa0172380:intron | 25.0% |
| ! | CTATAGTAATAGACAAGTAA+GGG | + | chr1_4:57402888-57402907 | Msa0172380:intron | 25.0% |
| !! | ATTAGAAATGAGTTACCTTT+TGG | - | chr1_4:57403296-57403315 | None:intergenic | 25.0% |
| !!! | TACAAGTAAGAGTATTGATT+TGG | - | chr1_4:57403524-57403543 | None:intergenic | 25.0% |
| ! | AAATCAATACTCTTACTTGT+AGG | + | chr1_4:57403523-57403542 | Msa0172380:intron | 25.0% |
| ! | AATCAATACTCTTACTTGTA+GGG | + | chr1_4:57403524-57403543 | Msa0172380:intron | 25.0% |
| !!! | TGGTTAGAATTCACTTTTTA+AGG | + | chr1_4:57403657-57403676 | Msa0172380:intron | 25.0% |
| !!! | ACTTTTTAAGGTGAATACAT+AGG | + | chr1_4:57403669-57403688 | Msa0172380:intron | 25.0% |
| !!! | CTTTTTAAGGTGAATACATA+GGG | + | chr1_4:57403670-57403689 | Msa0172380:intron | 25.0% |
| ! | CGATGCATAGTTAAATATAA+GGG | - | chr1_4:57403718-57403737 | None:intergenic | 25.0% |
| ! | ACGATGCATAGTTAAATATA+AGG | - | chr1_4:57403719-57403738 | None:intergenic | 25.0% |
| ! | AGGACAAAAATAACTACTAA+AGG | + | chr1_4:57403764-57403783 | Msa0172380:intron | 25.0% |
| ! | AAAGAATGGAACACATTATA+CGG | - | chr1_4:57403878-57403897 | None:intergenic | 25.0% |
| ! | TTTAAATTGCAGTTACGTTA+TGG | + | chr1_4:57403944-57403963 | Msa0172380:intron | 25.0% |
| ! | GCAAGTTAAAAAATCATTGA+GGG | - | chr1_4:57404774-57404793 | None:intergenic | 25.0% |
| ! | AGCAAGTTAAAAAATCATTG+AGG | - | chr1_4:57404775-57404794 | None:intergenic | 25.0% |
| ! | ATATGAAGTAAAAATGGAAG+TGG | - | chr1_4:57404970-57404989 | None:intergenic | 25.0% |
| !!! | CATTTTTTTTGTTAGCTACT+AGG | - | chr1_4:57405326-57405345 | None:intergenic | 25.0% |
| ! | AAAAATTACATCTGGTATCA+CGG | - | chr1_4:57405558-57405577 | None:intergenic | 25.0% |
| ! | CTGATAATAAGTGAAATTAG+AGG | + | chr1_4:57405619-57405638 | Msa0172380:three_prime_UTR | 25.0% |
| ! | TTGGAGGAAAAAATTCAATA+GGG | - | chr1_4:57405692-57405711 | None:intergenic | 25.0% |
| ! | TTTGGAGGAAAAAATTCAAT+AGG | - | chr1_4:57405693-57405712 | None:intergenic | 25.0% |
| !!! | TTTTTTCCTCCAAATATCTA+TGG | + | chr1_4:57405699-57405718 | Msa0172380:three_prime_UTR | 25.0% |
| ! | AAATGCTGCAGTATTGAAAA+AGG | + | chr1_4:57400611-57400630 | Msa0172380:five_prime_UTR | 30.0% |
| !!! | AGGTTATTAGTTTTGTGTAG+TGG | - | chr1_4:57400645-57400664 | None:intergenic | 30.0% |
| ! | AATTTGGAGCAAAATCATCA+TGG | + | chr1_4:57400860-57400879 | Msa0172380:CDS | 30.0% |
| ! | ATTTGGAGCAAAATCATCAT+GGG | + | chr1_4:57400861-57400880 | Msa0172380:CDS | 30.0% |
| AGAAGTTATGCCAAAACATT+TGG | + | chr1_4:57401480-57401499 | Msa0172380:intron | 30.0% | |
| !! | TATGCCAAAACATTTGGTTT+TGG | + | chr1_4:57401486-57401505 | Msa0172380:intron | 30.0% |
| GTCTAGCACAAATTATTGAA+TGG | + | chr1_4:57401767-57401786 | Msa0172380:intron | 30.0% | |
| ! | TGTGTGAATGTTTAAAACGA+TGG | + | chr1_4:57401799-57401818 | Msa0172380:intron | 30.0% |
| ! | ATATAGGTTTAGGTTTGAGT+GGG | - | chr1_4:57402330-57402349 | None:intergenic | 30.0% |
| ! | TATATAGGTTTAGGTTTGAG+TGG | - | chr1_4:57402331-57402350 | None:intergenic | 30.0% |
| TAATACTGATATTTCACTCG+AGG | - | chr1_4:57402570-57402589 | None:intergenic | 30.0% | |
| TCGAGTGAAATATCAGTATT+AGG | + | chr1_4:57402569-57402588 | Msa0172380:intron | 30.0% | |
| TCATTAATCACACACTAAAG+TGG | - | chr1_4:57403176-57403195 | None:intergenic | 30.0% | |
| TAAAACAAAAGAAAACGCGT+TGG | - | chr1_4:57403223-57403242 | None:intergenic | 30.0% | |
| AGTAATTGTCCTAGAGTAAT+AGG | + | chr1_4:57403264-57403283 | Msa0172380:intron | 30.0% | |
| AAATAAATGATGGTCCCATT+CGG | - | chr1_4:57403328-57403347 | None:intergenic | 30.0% | |
| ! | GGACCATCATTTATTTGTTA+GGG | + | chr1_4:57403332-57403351 | Msa0172380:intron | 30.0% |
| AAGCCCTAACAAATAAATGA+TGG | - | chr1_4:57403338-57403357 | None:intergenic | 30.0% | |
| TGACGCTTAATCATAATTGT+CGG | + | chr1_4:57403398-57403417 | Msa0172380:intron | 30.0% | |
| TTGACAAGAACTTTAAATGG+AGG | - | chr1_4:57403432-57403451 | None:intergenic | 30.0% | |
| ! | TCCATTTAAAGTTCTTGTCA+AGG | + | chr1_4:57403431-57403450 | Msa0172380:intron | 30.0% |
| TCCTTGACAAGAACTTTAAA+TGG | - | chr1_4:57403435-57403454 | None:intergenic | 30.0% | |
| !!! | CGTTGATGTATCTTTTTTTC+CGG | + | chr1_4:57403491-57403510 | Msa0172380:intron | 30.0% |
| !!! | GTTGATGTATCTTTTTTTCC+GGG | + | chr1_4:57403492-57403511 | Msa0172380:intron | 30.0% |
| !!! | TTGATGTATCTTTTTTTCCG+GGG | + | chr1_4:57403493-57403512 | Msa0172380:intron | 30.0% |
| TAACCATTAAGCTATTTGAC+CGG | - | chr1_4:57403643-57403662 | None:intergenic | 30.0% | |
| TTGATTATGTGAAGTTCCTT+AGG | + | chr1_4:57404505-57404524 | Msa0172380:CDS | 30.0% | |
| TCTATACACATACCTTAACT+TGG | - | chr1_4:57404533-57404552 | None:intergenic | 30.0% | |
| ! | GATCCTTCTTGATTTTCATT+TGG | + | chr1_4:57404551-57404570 | Msa0172380:intron | 30.0% |
| GCAAATTTATGTCAAGTTTG+TGG | - | chr1_4:57405354-57405373 | None:intergenic | 30.0% | |
| TGAAAAGTAGGGAGAAATAT+TGG | - | chr1_4:57405378-57405397 | None:intergenic | 30.0% | |
| !! | ATTTCTCCCTACTTTTCATA+AGG | + | chr1_4:57405380-57405399 | Msa0172380:three_prime_UTR | 30.0% |
| ! | TTTGTAGCTTTGCAAAATCA+CGG | - | chr1_4:57405481-57405500 | None:intergenic | 30.0% |
| TGGATATATATGTCAGAATC+AGG | - | chr1_4:57405535-57405554 | None:intergenic | 30.0% | |
| !!! | CTTTTTGTTTTTTGAGTCAG+TGG | + | chr1_4:57405782-57405801 | Msa0172380:three_prime_UTR | 30.0% |
| !!! | TATTCCATTTTCAGGTCCTA+GGG | + | chr1_4:57400506-57400525 | Msa0172380:five_prime_UTR | 35.0% |
| AACACAAAAAGCAGGAAACA+AGG | - | chr1_4:57400564-57400583 | None:intergenic | 35.0% | |
| AAAAGAATCTTAGACATGGC+TGG | + | chr1_4:57400677-57400696 | Msa0172380:exon | 35.0% | |
| GGTAATTGTTCAGAAGGATT+AGG | + | chr1_4:57400698-57400717 | Msa0172380:CDS | 35.0% | |
| !! | AATGCCTTTAGGGTTGAATT+TGG | + | chr1_4:57400844-57400863 | Msa0172380:CDS | 35.0% |
| AAAATCATCATGGGTTTCTC+AGG | + | chr1_4:57400870-57400889 | Msa0172380:CDS | 35.0% | |
| GATAACGTTGTTGATGTTGA+AGG | + | chr1_4:57400920-57400939 | Msa0172380:CDS | 35.0% | |
| AGGTGAAGAAGTGATATTGT+TGG | - | chr1_4:57401017-57401036 | None:intergenic | 35.0% | |
| TGAAAACATACAGTGATTCC+CGG | - | chr1_4:57401049-57401068 | None:intergenic | 35.0% | |
| CTCAAATTACTAGCTATGTC+AGG | - | chr1_4:57401155-57401174 | None:intergenic | 35.0% | |
| AATCCTGAATCATATCTTGG+AGG | + | chr1_4:57401392-57401411 | Msa0172380:intron | 35.0% | |
| TAACCTCCAAGATATGATTC+AGG | - | chr1_4:57401398-57401417 | None:intergenic | 35.0% | |
| ATTAGTTAATAGTGCTCCGT+GGG | + | chr1_4:57401422-57401441 | Msa0172380:intron | 35.0% | |
| GTCCAAGATCTTACTTAGTT+AGG | + | chr1_4:57401823-57401842 | Msa0172380:intron | 35.0% | |
| TGCCTAACTAAGTAAGATCT+TGG | - | chr1_4:57401828-57401847 | None:intergenic | 35.0% | |
| ! | TTATATGGTTTGTCTCTTGC+AGG | + | chr1_4:57401920-57401939 | Msa0172380:intron | 35.0% |
| !! | AGGAGTTTGTTTTCAACGTT+TGG | + | chr1_4:57401963-57401982 | Msa0172380:CDS | 35.0% |
| TTGGAAAATGAGGGACAATA+TGG | - | chr1_4:57402148-57402167 | None:intergenic | 35.0% | |
| GAGCTACTAATACTCTTCTT+TGG | - | chr1_4:57402233-57402252 | None:intergenic | 35.0% | |
| ATATTTAAGCGCTTCATCCA+TGG | + | chr1_4:57402431-57402450 | Msa0172380:intron | 35.0% | |
| TCACTCGAGGAAAAAGAAAA+AGG | - | chr1_4:57402557-57402576 | None:intergenic | 35.0% | |
| GGGACCATCATTTATTTGTT+AGG | + | chr1_4:57403331-57403350 | Msa0172380:intron | 35.0% | |
| !! | GTATTGATTTGGTAAAACCC+CGG | - | chr1_4:57403513-57403532 | None:intergenic | 35.0% |
| TTTCCGGTCAAATAGCTTAA+TGG | + | chr1_4:57403637-57403656 | Msa0172380:intron | 35.0% | |
| CATGCAAACTGAGTTATACT+CGG | + | chr1_4:57403740-57403759 | Msa0172380:intron | 35.0% | |
| ATGCAAACTGAGTTATACTC+GGG | + | chr1_4:57403741-57403760 | Msa0172380:intron | 35.0% | |
| TTGATCAAGATTCGTATGCA+TGG | + | chr1_4:57403805-57403824 | Msa0172380:intron | 35.0% | |
| ! | AAGTGCTGCAATATTGCAAT+GGG | - | chr1_4:57404060-57404079 | None:intergenic | 35.0% |
| !! | AAAGTGCTGCAATATTGCAA+TGG | - | chr1_4:57404061-57404080 | None:intergenic | 35.0% |
| !! | TGAAAGAATGAAAGCATTGC+AGG | + | chr1_4:57404301-57404320 | Msa0172380:CDS | 35.0% |
| GAGCCAAATGAAAATCAAGA+AGG | - | chr1_4:57404557-57404576 | None:intergenic | 35.0% | |
| !!! | AGGGTTGCTTTTGAAAATTC+AGG | + | chr1_4:57404631-57404650 | Msa0172380:intron | 35.0% |
| AAACTTATGGAGGAAGATGT+TGG | + | chr1_4:57405161-57405180 | Msa0172380:CDS | 35.0% | |
| TATGCAACTTCTTCAATCCA+AGG | + | chr1_4:57405190-57405209 | Msa0172380:CDS | 35.0% | |
| ATTGCTGATGCTAGAGATAT+AGG | - | chr1_4:57405230-57405249 | None:intergenic | 35.0% | |
| ! | ATTGTTGATGAGTCTGATTG+AGG | - | chr1_4:57405263-57405282 | None:intergenic | 35.0% |
| TATGTGTGGTTGTTTGATTC+AGG | - | chr1_4:57405293-57405312 | None:intergenic | 35.0% | |
| TAGGAGTAACATTCTATGTG+TGG | - | chr1_4:57405307-57405326 | None:intergenic | 35.0% | |
| AGTATATGTTGGTATCACAC+TGG | + | chr1_4:57405431-57405450 | Msa0172380:three_prime_UTR | 35.0% | |
| !! | TCTTCGAGTTTTGTCAAACT+AGG | + | chr1_4:57405582-57405601 | Msa0172380:three_prime_UTR | 35.0% |
| TTTCCTCCAAATATCTATGG+TGG | + | chr1_4:57405702-57405721 | Msa0172380:three_prime_UTR | 35.0% | |
| TTCCTCCAAATATCTATGGT+GGG | + | chr1_4:57405703-57405722 | Msa0172380:three_prime_UTR | 35.0% | |
| !!! | TTTTTTGAGTCAGTGGAAAG+TGG | + | chr1_4:57405789-57405808 | Msa0172380:three_prime_UTR | 35.0% |
| !!! | TTTTTGAGTCAGTGGAAAGT+GGG | + | chr1_4:57405790-57405809 | Msa0172380:three_prime_UTR | 35.0% |
| AGAAGAGAGAAAGAGATGAG+TGG | - | chr1_4:57400364-57400383 | None:intergenic | 40.0% | |
| !!! | CTATTCCATTTTCAGGTCCT+AGG | + | chr1_4:57400505-57400524 | Msa0172380:five_prime_UTR | 40.0% |
| ATGGCTGGTAATTGTTCAGA+AGG | + | chr1_4:57400692-57400711 | Msa0172380:CDS | 40.0% | |
| GAGGAGGAATAATGCCTTTA+GGG | + | chr1_4:57400834-57400853 | Msa0172380:CDS | 40.0% | |
| TGCTCCAAATTCAACCCTAA+AGG | - | chr1_4:57400851-57400870 | None:intergenic | 40.0% | |
| TTCTTCACCTTCTTCTACTC+CGG | + | chr1_4:57401027-57401046 | Msa0172380:CDS | 40.0% | |
| ! | GATTAGTTAATAGTGCTCCG+TGG | + | chr1_4:57401421-57401440 | Msa0172380:intron | 40.0% |
| !! | ATGATACCTGTTGGTGTTGA+TGG | - | chr1_4:57402070-57402089 | None:intergenic | 40.0% |
| !! | GTTTAGGTTTGAGTGGGTTA+CGG | - | chr1_4:57402324-57402343 | None:intergenic | 40.0% |
| AATGAATGAATGAACGGCCA+TGG | - | chr1_4:57402451-57402470 | None:intergenic | 40.0% | |
| ! | TCCTTTAGCCTTTCTACTTG+CGG | + | chr1_4:57402593-57402612 | Msa0172380:intron | 40.0% |
| TGTCCTAGAGTAATAGGCAT+TGG | + | chr1_4:57403270-57403289 | Msa0172380:intron | 40.0% | |
| !! | AGTAATAGGCATTGGCCAAA+AGG | + | chr1_4:57403278-57403297 | Msa0172380:intron | 40.0% |
| CGAGTATAACTCAGTTTGCA+TGG | - | chr1_4:57403742-57403761 | None:intergenic | 40.0% | |
| AGATTCGTATGCATGGAAGT+AGG | + | chr1_4:57403812-57403831 | Msa0172380:intron | 40.0% | |
| ! | AACACATTATACGGCTAGCT+AGG | - | chr1_4:57403869-57403888 | None:intergenic | 40.0% |
| ATTAGTTCCCAGCATCAACA+AGG | + | chr1_4:57404325-57404344 | Msa0172380:CDS | 40.0% | |
| ! | ATACCTTAACTTGGAGCCTA+AGG | - | chr1_4:57404524-57404543 | None:intergenic | 40.0% |
| AACTCTATGATCTGTGTGCA+GGG | + | chr1_4:57405062-57405081 | Msa0172380:intron | 40.0% | |
| ACAACAGGTGGCTAAACTTA+TGG | + | chr1_4:57405148-57405167 | Msa0172380:CDS | 40.0% | |
| AATTACATCTGGTATCACGG+TGG | - | chr1_4:57405555-57405574 | None:intergenic | 40.0% | |
| CACCATGACAATGACATACT+GGG | - | chr1_4:57405647-57405666 | None:intergenic | 40.0% | |
| TCACCATGACAATGACATAC+TGG | - | chr1_4:57405648-57405667 | None:intergenic | 40.0% | |
| TCCTCCAAATATCTATGGTG+GGG | + | chr1_4:57405704-57405723 | Msa0172380:three_prime_UTR | 40.0% | |
| !! | TTTTGAGTCAGTGGAAAGTG+GGG | + | chr1_4:57405791-57405810 | Msa0172380:three_prime_UTR | 40.0% |
| GGAAAGTGGGGACATTTAAA+AGG | + | chr1_4:57405803-57405822 | Msa0172380:three_prime_UTR | 40.0% | |
| GTGGGGACATTTAAAAGGAA+AGG | + | chr1_4:57405808-57405827 | Msa0172380:three_prime_UTR | 40.0% | |
| AGAAAATGGTGAGTGCGCTA+TGG | - | chr1_4:57400307-57400326 | None:intergenic | 45.0% | |
| AGAGAGAAAGAGATGAGTGG+TGG | - | chr1_4:57400361-57400380 | None:intergenic | 45.0% | |
| ! | GAGAAGTGTGAGAATGGAGA+AGG | - | chr1_4:57400387-57400406 | None:intergenic | 45.0% |
| ! | GTGAGTGAGAAGTGTGAGAA+TGG | - | chr1_4:57400393-57400412 | None:intergenic | 45.0% |
| GAAACCCTAGGACCTGAAAA+TGG | - | chr1_4:57400513-57400532 | None:intergenic | 45.0% | |
| ATCTTAGCAGTGCCTGAGAA+CGG | + | chr1_4:57400740-57400759 | Msa0172380:CDS | 45.0% | |
| CTGAGAACGGAGTTGGATAT+GGG | + | chr1_4:57400753-57400772 | Msa0172380:CDS | 45.0% | |
| TGAGAACGGAGTTGGATATG+GGG | + | chr1_4:57400754-57400773 | Msa0172380:CDS | 45.0% | |
| !! | ATATGGGGGAGTGTTGCAAT+TGG | + | chr1_4:57400769-57400788 | Msa0172380:CDS | 45.0% |
| !! | TATGGGGGAGTGTTGCAATT+GGG | + | chr1_4:57400770-57400789 | Msa0172380:CDS | 45.0% |
| GGAGGAGGAATAATGCCTTT+AGG | + | chr1_4:57400833-57400852 | Msa0172380:CDS | 45.0% | |
| TCTTCACCTTCTTCTACTCC+GGG | + | chr1_4:57401028-57401047 | Msa0172380:CDS | 45.0% | |
| GCATATACTCTGACATCCCA+CGG | - | chr1_4:57401441-57401460 | None:intergenic | 45.0% | |
| ! | TGGTTTGTCTCTTGCAGGAT+AGG | + | chr1_4:57401925-57401944 | Msa0172380:intron | 45.0% |
| GGTTTGTCTCTTGCAGGATA+GGG | + | chr1_4:57401926-57401945 | Msa0172380:intron | 45.0% | |
| ATAGGGATTCGATGCAGATG+AGG | + | chr1_4:57401943-57401962 | Msa0172380:CDS | 45.0% | |
| !! | TTGATGGTGAAGGTGGAGTT+GGG | - | chr1_4:57402054-57402073 | None:intergenic | 45.0% |
| TCCGCAAGTAGAAAGGCTAA+AGG | - | chr1_4:57402597-57402616 | None:intergenic | 45.0% | |
| TGGCCAATGCCTATTACTCT+AGG | - | chr1_4:57403276-57403295 | None:intergenic | 45.0% | |
| TCTAATAGCCTCGTACCGAA+TGG | + | chr1_4:57403310-57403329 | Msa0172380:intron | 45.0% | |
| CTAATAGCCTCGTACCGAAT+GGG | + | chr1_4:57403311-57403330 | Msa0172380:intron | 45.0% | |
| ! | GTGAATACATAGGGTGTCTG+AGG | + | chr1_4:57403679-57403698 | Msa0172380:intron | 45.0% |
| CAAACTGAGTTATACTCGGG+AGG | + | chr1_4:57403744-57403763 | Msa0172380:intron | 45.0% | |
| GTGGTTGTAGACTGACAAAG+CGG | + | chr1_4:57404464-57404483 | Msa0172380:intron | 45.0% | |
| GTTCCTTAGGCTCCAAGTTA+AGG | + | chr1_4:57404518-57404537 | Msa0172380:CDS | 45.0% | |
| GTCTTGAGCATGAGTAGACT+TGG | + | chr1_4:57404840-57404859 | Msa0172380:CDS | 45.0% | |
| TTGAGCATGAGTAGACTTGG+TGG | + | chr1_4:57404843-57404862 | Msa0172380:CDS | 45.0% | |
| TATCACCTCCACTGCAGAAA+CGG | - | chr1_4:57404904-57404923 | None:intergenic | 45.0% | |
| CAACTCTATGATCTGTGTGC+AGG | + | chr1_4:57405061-57405080 | Msa0172380:intron | 45.0% | |
| ACTCTATGATCTGTGTGCAG+GGG | + | chr1_4:57405063-57405082 | Msa0172380:intron | 45.0% | |
| GAACGATGGAACAGAACAAC+AGG | + | chr1_4:57405133-57405152 | Msa0172380:CDS | 45.0% | |
| ACAGGTGGCTAAACTTATGG+AGG | + | chr1_4:57405151-57405170 | Msa0172380:CDS | 45.0% | |
| ! | AGGCATTATGCAAAGTGCCT+TGG | - | chr1_4:57405210-57405229 | None:intergenic | 45.0% |
| ! | GTAGCTTTGCAAAATCACGG+TGG | - | chr1_4:57405478-57405497 | None:intergenic | 45.0% |
| AGCCCAGTATGTCATTGTCA+TGG | + | chr1_4:57405642-57405661 | Msa0172380:three_prime_UTR | 45.0% | |
| ACCCCACCATAGATATTTGG+AGG | - | chr1_4:57405708-57405727 | None:intergenic | 45.0% | |
| CCAACCCCACCATAGATATT+TGG | - | chr1_4:57405711-57405730 | None:intergenic | 45.0% | |
| ! | CCAAATATCTATGGTGGGGT+TGG | + | chr1_4:57405708-57405727 | Msa0172380:three_prime_UTR | 45.0% |
| ! | AATATCTATGGTGGGGTTGG+TGG | + | chr1_4:57405711-57405730 | Msa0172380:three_prime_UTR | 45.0% |
| GGTTTCACACACACCACGTA+CGG | + | chr1_4:57400527-57400546 | Msa0172380:five_prime_UTR | 50.0% | |
| ! | GGAGAGATGTTTTCCGTACG+TGG | - | chr1_4:57400543-57400562 | None:intergenic | 50.0% |
| CCATATCCAACTCCGTTCTC+AGG | - | chr1_4:57400755-57400774 | None:intergenic | 50.0% | |
| CCTGAGAACGGAGTTGGATA+TGG | + | chr1_4:57400752-57400771 | Msa0172380:CDS | 50.0% | |
| GAGAACGGAGTTGGATATGG+GGG | + | chr1_4:57400755-57400774 | Msa0172380:CDS | 50.0% | |
| !! | ATGGGGGAGTGTTGCAATTG+GGG | + | chr1_4:57400771-57400790 | Msa0172380:CDS | 50.0% |
| CAAAGAACCACCATGAGGTG+TGG | - | chr1_4:57400798-57400817 | None:intergenic | 50.0% | |
| CCTCTCAAAGAACCACCATG+AGG | - | chr1_4:57400803-57400822 | None:intergenic | 50.0% | |
| CCTCATGGTGGTTCTTTGAG+AGG | + | chr1_4:57400800-57400819 | Msa0172380:CDS | 50.0% | |
| ! | CATGGTGGTTCTTTGAGAGG+AGG | + | chr1_4:57400803-57400822 | Msa0172380:CDS | 50.0% |
| GGCAGCATCAAGATGCAACA+CGG | + | chr1_4:57400891-57400910 | Msa0172380:CDS | 50.0% | |
| GTGATTCCCGGAGTAGAAGA+AGG | - | chr1_4:57401037-57401056 | None:intergenic | 50.0% | |
| ! | CGTACAGGTTGAGCATGAGT+AGG | - | chr1_4:57402002-57402021 | None:intergenic | 50.0% |
| ! | TGATGGTGAAGGTGGAGTTG+GGG | - | chr1_4:57402053-57402072 | None:intergenic | 50.0% |
| !! | GTTGATGGTGAAGGTGGAGT+TGG | - | chr1_4:57402055-57402074 | None:intergenic | 50.0% |
| !! | GTTGGTGTTGATGGTGAAGG+TGG | - | chr1_4:57402061-57402080 | None:intergenic | 50.0% |
| !! | CCTGTTGGTGTTGATGGTGA+AGG | - | chr1_4:57402064-57402083 | None:intergenic | 50.0% |
| CCTTCACCATCAACACCAAC+AGG | + | chr1_4:57402061-57402080 | Msa0172380:CDS | 50.0% | |
| GGAAGTGGCTCATTGGTGTA+TGG | - | chr1_4:57402299-57402318 | None:intergenic | 50.0% | |
| !! | AGGTTTGAGTGGGTTACGGA+CGG | - | chr1_4:57402320-57402339 | None:intergenic | 50.0% |
| ATTTGCAGAATTACGGGCCG+TGG | + | chr1_4:57402661-57402680 | Msa0172380:intron | 50.0% | |
| GGGGGAGTAACAATGTACCA+CGG | - | chr1_4:57402681-57402700 | None:intergenic | 50.0% | |
| GCAGTAACAGACGCTGGATT+TGG | - | chr1_4:57404096-57404115 | None:intergenic | 50.0% | |
| GTTCCCAGCATCAACAAGGT+TGG | + | chr1_4:57404329-57404348 | Msa0172380:intron | 50.0% | |
| CCACCAACCTTGTTGATGCT+GGG | - | chr1_4:57404335-57404354 | None:intergenic | 50.0% | |
| ACCACCAACCTTGTTGATGC+TGG | - | chr1_4:57404336-57404355 | None:intergenic | 50.0% | |
| !! | ATGAGTAGACTTGGTGGAGC+TGG | + | chr1_4:57404849-57404868 | Msa0172380:CDS | 50.0% |
| TGATGTTCCCGTTTCTGCAG+TGG | + | chr1_4:57404893-57404912 | Msa0172380:CDS | 50.0% | |
| ATCACCTCCACTGCAGAAAC+GGG | - | chr1_4:57404903-57404922 | None:intergenic | 50.0% | |
| CTCTATGATCTGTGTGCAGG+GGG | + | chr1_4:57405064-57405083 | Msa0172380:intron | 50.0% | |
| CGATGGAACAGAACAACAGG+TGG | + | chr1_4:57405136-57405155 | Msa0172380:CDS | 50.0% | |
| CGTGGTGTGTGTGAAACCCT+AGG | - | chr1_4:57400525-57400544 | None:intergenic | 55.0% | |
| CAATTGGGGTCCACACCTCA+TGG | + | chr1_4:57400785-57400804 | Msa0172380:CDS | 55.0% | |
| ! | GGTGGTTCTTTGAGAGGAGG+TGG | + | chr1_4:57400806-57400825 | Msa0172380:CDS | 55.0% |
| ! | GGTTCTTTGAGAGGAGGTGG+AGG | + | chr1_4:57400809-57400828 | Msa0172380:CDS | 55.0% |
| ! | TCTTTGAGAGGAGGTGGAGG+AGG | + | chr1_4:57400812-57400831 | Msa0172380:CDS | 55.0% |
| GGGGTTGAGATTGGAGCATG+GGG | - | chr1_4:57402025-57402044 | None:intergenic | 55.0% | |
| GGGGGTTGAGATTGGAGCAT+GGG | - | chr1_4:57402026-57402045 | None:intergenic | 55.0% | |
| AGGGGGTTGAGATTGGAGCA+TGG | - | chr1_4:57402027-57402046 | None:intergenic | 55.0% | |
| AAGGTGGAGTTGGGGTTGAG+GGG | - | chr1_4:57402045-57402064 | None:intergenic | 55.0% | |
| GAAGGTGGAGTTGGGGTTGA+GGG | - | chr1_4:57402046-57402065 | None:intergenic | 55.0% | |
| TGAAGGTGGAGTTGGGGTTG+AGG | - | chr1_4:57402047-57402066 | None:intergenic | 55.0% | |
| TACGGACGGAAGTGGCTCAT+TGG | - | chr1_4:57402306-57402325 | None:intergenic | 55.0% | |
| GAGCGCATCCGCAAGTAGAA+AGG | - | chr1_4:57402604-57402623 | None:intergenic | 55.0% | |
| TGATGGTCCCATTCGGTACG+AGG | - | chr1_4:57403321-57403340 | None:intergenic | 55.0% | |
| ! | CAGACGCTGGATTTGGTTGC+TGG | - | chr1_4:57404089-57404108 | None:intergenic | 55.0% |
| TTCTTGCTCGCACTCGAGGA+CGG | - | chr1_4:57404140-57404159 | None:intergenic | 55.0% | |
| TACCCGCTCAGCAATGCTGT+GGG | - | chr1_4:57404181-57404200 | None:intergenic | 55.0% | |
| TTACCCGCTCAGCAATGCTG+TGG | - | chr1_4:57404182-57404201 | None:intergenic | 55.0% | |
| CCCAGCATCAACAAGGTTGG+TGG | + | chr1_4:57404332-57404351 | Msa0172380:intron | 55.0% | |
| TGTTCCCGTTTCTGCAGTGG+AGG | + | chr1_4:57404896-57404915 | Msa0172380:CDS | 55.0% | |
| TATGATCTGTGTGCAGGGGG+AGG | + | chr1_4:57405067-57405086 | Msa0172380:intron | 55.0% | |
| TGGAACCAACCAGCAAGCCT+GGG | + | chr1_4:57405100-57405119 | Msa0172380:CDS | 55.0% | |
| GCAGTGCCTGAGAACGGAGT+TGG | + | chr1_4:57400746-57400765 | Msa0172380:CDS | 60.0% | |
| TTGGGGTCCACACCTCATGG+TGG | + | chr1_4:57400788-57400807 | Msa0172380:CDS | 60.0% | |
| TTGAGAGGAGGTGGAGGAGG+AGG | + | chr1_4:57400815-57400834 | Msa0172380:CDS | 60.0% | |
| GATTGGAGCATGGGGCGTAC+AGG | - | chr1_4:57402017-57402036 | None:intergenic | 60.0% | |
| GGGGTTGAGGGGGTTGAGAT+TGG | - | chr1_4:57402034-57402053 | None:intergenic | 60.0% | |
| AGGTGGAGTTGGGGTTGAGG+GGG | - | chr1_4:57402044-57402063 | None:intergenic | 60.0% | |
| !! | GAGTGGGTTACGGACGGAAG+TGG | - | chr1_4:57402314-57402333 | None:intergenic | 60.0% |
| GGCATGGCAGTAACAGACGC+TGG | - | chr1_4:57404102-57404121 | None:intergenic | 60.0% | |
| ACTGCCATGCCACAACCACC+TGG | + | chr1_4:57404111-57404130 | Msa0172380:CDS | 60.0% | |
| GATGCCAGGTGGTTGTGGCA+TGG | - | chr1_4:57404118-57404137 | None:intergenic | 60.0% | |
| CCTCTTCTTGCTCGCACTCG+AGG | - | chr1_4:57404144-57404163 | None:intergenic | 60.0% | |
| CCTCGAGTGCGAGCAAGAAG+AGG | + | chr1_4:57404141-57404160 | Msa0172380:CDS | 60.0% | |
| AGCAATGCTGTGGGGGTCTG+TGG | - | chr1_4:57404172-57404191 | None:intergenic | 60.0% | |
| ACCCCCACAGCATTGCTGAG+CGG | + | chr1_4:57404175-57404194 | Msa0172380:CDS | 60.0% | |
| ACCCGCTCAGCAATGCTGTG+GGG | - | chr1_4:57404180-57404199 | None:intergenic | 60.0% | |
| GTGCAGGGGGAGGACATAGA+AGG | + | chr1_4:57405077-57405096 | Msa0172380:intron | 60.0% | |
| CAGGGGGAGGACATAGAAGG+TGG | + | chr1_4:57405080-57405099 | Msa0172380:intron | 60.0% | |
| GTGGAACCAACCAGCAAGCC+TGG | + | chr1_4:57405099-57405118 | Msa0172380:CDS | 60.0% | |
| ATCGTTCGACCACTTCGCCC+AGG | - | chr1_4:57405120-57405139 | None:intergenic | 60.0% | |
| TGGGCGAAGTGGTCGAACGA+TGG | + | chr1_4:57405119-57405138 | Msa0172380:CDS | 60.0% | |
| AGAGGAGGTGGAGGAGGAGG+AGG | + | chr1_4:57400818-57400837 | Msa0172380:CDS | 65.0% | |
| GGACGGATGCCAGGTGGTTG+TGG | - | chr1_4:57404123-57404142 | None:intergenic | 65.0% | |
| ACTCGAGGACGGATGCCAGG+TGG | - | chr1_4:57404129-57404148 | None:intergenic | 65.0% | |
| TGCTGTGGGGGTCTGTGGCT+TGG | - | chr1_4:57404167-57404186 | None:intergenic | 65.0% | |
| CCCGCTCAGCAATGCTGTGG+GGG | - | chr1_4:57404179-57404198 | None:intergenic | 65.0% | |
| CCCCCACAGCATTGCTGAGC+GGG | + | chr1_4:57404176-57404195 | Msa0172380:CDS | 65.0% | |
| !! | CTTCGCCCAGGCTTGCTGGT+TGG | - | chr1_4:57405108-57405127 | None:intergenic | 65.0% |
| ACCAGCAAGCCTGGGCGAAG+TGG | + | chr1_4:57405108-57405127 | Msa0172380:CDS | 65.0% | |
| ACCACTTCGCCCAGGCTTGC+TGG | - | chr1_4:57405112-57405131 | None:intergenic | 65.0% | |
| CGCACTCGAGGACGGATGCC+AGG | - | chr1_4:57404132-57404151 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57400190 | 57405890 | 57400190 | ID=Msa0172380;Name=Msa0172380 |
| chr1_4 | mRNA | 57400190 | 57405890 | 57400190 | ID=Msa0172380-mRNA-1;Parent=Msa0172380;Name=Msa0172380-mRNA-1;_AED=0.02;_eAED=0.02;_QI=502|1|1|1|1|1|7|577|356 |
| chr1_4 | exon | 57400190 | 57401057 | 57400190 | ID=Msa0172380-mRNA-1:exon:17559;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57401942 | 57402082 | 57401942 | ID=Msa0172380-mRNA-1:exon:17560;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57404075 | 57404197 | 57404075 | ID=Msa0172380-mRNA-1:exon:17561;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57404281 | 57404346 | 57404281 | ID=Msa0172380-mRNA-1:exon:17562;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57404474 | 57404539 | 57404474 | ID=Msa0172380-mRNA-1:exon:17563;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57404840 | 57404917 | 57404840 | ID=Msa0172380-mRNA-1:exon:17564;Parent=Msa0172380-mRNA-1 |
| chr1_4 | exon | 57405083 | 57405890 | 57405083 | ID=Msa0172380-mRNA-1:exon:17565;Parent=Msa0172380-mRNA-1 |
| chr1_4 | five_prime_UTR | 57400190 | 57400691 | 57400190 | ID=Msa0172380-mRNA-1:five_prime_utr;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57400692 | 57401057 | 57400692 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57401942 | 57402082 | 57401942 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57404075 | 57404197 | 57404075 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57404281 | 57404346 | 57404281 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57404474 | 57404539 | 57404474 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57404840 | 57404917 | 57404840 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | CDS | 57405083 | 57405313 | 57405083 | ID=Msa0172380-mRNA-1:cds;Parent=Msa0172380-mRNA-1 |
| chr1_4 | three_prime_UTR | 57405314 | 57405890 | 57405314 | ID=Msa0172380-mRNA-1:three_prime_utr;Parent=Msa0172380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
