Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463010 | XP_024627854.1 | 93.494 | 415 | 26 | 1 | 1 | 415 | 258 | 671 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463010 | sp|Q8L5R3|TBCD_ARATH | 71.635 | 416 | 110 | 4 | 3 | 414 | 265 | 676 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463010 | A0A072VQN2 | 93.494 | 415 | 26 | 1 | 1 | 415 | 258 | 671 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa1463010 | 0.808712 | 2.706162e-50 | -8.615850e-47 |
| Msa0002560 | Msa1463010 | 0.803902 | 2.792126e-49 | -8.615850e-47 |
| Msa0003220 | Msa1463010 | 0.839244 | 1.779851e-57 | -8.615850e-47 |
| Msa0003270 | Msa1463010 | 0.808826 | 2.559283e-50 | -8.615850e-47 |
| Msa0005620 | Msa1463010 | 0.806740 | 7.103565e-50 | -8.615850e-47 |
| Msa0017320 | Msa1463010 | 0.808349 | 3.235033e-50 | -8.615850e-47 |
| Msa0017390 | Msa1463010 | 0.809431 | 1.898685e-50 | -8.615850e-47 |
| Msa0022750 | Msa1463010 | -0.804845 | 1.776701e-49 | -8.615850e-47 |
| Msa0028340 | Msa1463010 | 0.812466 | 4.179919e-51 | -8.615850e-47 |
| Msa0031180 | Msa1463010 | 0.818405 | 1.993838e-52 | -8.615850e-47 |
| Msa0035120 | Msa1463010 | 0.803497 | 3.388961e-49 | -8.615850e-47 |
| Msa0041690 | Msa1463010 | 0.826229 | 3.042269e-54 | -8.615850e-47 |
| Msa0043500 | Msa1463010 | 0.806053 | 9.916092e-50 | -8.615850e-47 |
| Msa0043650 | Msa1463010 | 0.813491 | 2.491207e-51 | -8.615850e-47 |
| Msa0045340 | Msa1463010 | 0.826055 | 3.346790e-54 | -8.615850e-47 |
| Msa0046560 | Msa1463010 | 0.821303 | 4.338675e-53 | -8.615850e-47 |
| Msa0047640 | Msa1463010 | 0.825415 | 4.746085e-54 | -8.615850e-47 |
| Msa0054530 | Msa1463010 | 0.836377 | 9.699898e-57 | -8.615850e-47 |
| Msa0054820 | Msa1463010 | 0.855813 | 4.902339e-62 | -8.615850e-47 |
| Msa0056450 | Msa1463010 | 0.825993 | 3.461061e-54 | -8.615850e-47 |
| Msa0064110 | Msa1463010 | 0.800462 | 1.425212e-48 | -8.615850e-47 |
| Msa0064920 | Msa1463010 | 0.838982 | 2.080266e-57 | -8.615850e-47 |
| Msa0065550 | Msa1463010 | 0.805293 | 1.431533e-49 | -8.615850e-47 |
| Msa0074750 | Msa1463010 | 0.809384 | 1.943521e-50 | -8.615850e-47 |
| Msa0076170 | Msa1463010 | 0.808976 | 2.376369e-50 | -8.615850e-47 |
| Msa0078480 | Msa1463010 | 0.817541 | 3.125669e-52 | -8.615850e-47 |
| Msa0089980 | Msa1463010 | 0.874404 | 6.936617e-68 | -8.615850e-47 |
| Msa0090010 | Msa1463010 | 0.871389 | 7.091426e-67 | -8.615850e-47 |
| Msa0090660 | Msa1463010 | 0.871390 | 7.088646e-67 | -8.615850e-47 |
| Msa0091780 | Msa1463010 | 0.828103 | 1.082982e-54 | -8.615850e-47 |
| Msa0096580 | Msa1463010 | 0.811759 | 5.960273e-51 | -8.615850e-47 |
| Msa0100160 | Msa1463010 | 0.831735 | 1.410564e-55 | -8.615850e-47 |
| Msa0106620 | Msa1463010 | 0.846505 | 2.082027e-59 | -8.615850e-47 |
| Msa0106710 | Msa1463010 | 0.827235 | 1.750133e-54 | -8.615850e-47 |
| Msa0112270 | Msa1463010 | 0.808907 | 2.459184e-50 | -8.615850e-47 |
| Msa0115090 | Msa1463010 | 0.802652 | 5.068004e-49 | -8.615850e-47 |
| Msa0115560 | Msa1463010 | 0.803027 | 4.240245e-49 | -8.615850e-47 |
| Msa0116790 | Msa1463010 | 0.807082 | 6.013942e-50 | -8.615850e-47 |
| Msa1359560 | Msa1463010 | 0.840377 | 9.022902e-58 | -8.615850e-47 |
| Msa1364430 | Msa1463010 | 0.852356 | 4.872323e-61 | -8.615850e-47 |
| Msa1366550 | Msa1463010 | 0.844040 | 9.668204e-59 | -8.615850e-47 |
| Msa1369690 | Msa1463010 | 0.894906 | 1.586970e-75 | -8.615850e-47 |
| Msa1372790 | Msa1463010 | 0.803001 | 4.292670e-49 | -8.615850e-47 |
| Msa1373820 | Msa1463010 | 0.805293 | 1.431968e-49 | -8.615850e-47 |
| Msa1391720 | Msa1463010 | 0.817223 | 3.687161e-52 | -8.615850e-47 |
| Msa1393820 | Msa1463010 | 0.875740 | 2.427467e-68 | -8.615850e-47 |
| Msa1401460 | Msa1463010 | 0.815821 | 7.597586e-52 | -8.615850e-47 |
| Msa1403710 | Msa1463010 | 0.823108 | 1.654447e-53 | -8.615850e-47 |
| Msa1409950 | Msa1463010 | 0.848353 | 6.472032e-60 | -8.615850e-47 |
| Msa1411950 | Msa1463010 | 0.827310 | 1.678669e-54 | -8.615850e-47 |
| Msa1418240 | Msa1463010 | 0.826459 | 2.681033e-54 | -8.615850e-47 |
| Msa1418260 | Msa1463010 | 0.828259 | 9.929054e-55 | -8.615850e-47 |
| Msa1420250 | Msa1463010 | 0.861402 | 1.051889e-63 | -8.615850e-47 |
| Msa1424350 | Msa1463010 | 0.807162 | 5.781996e-50 | -8.615850e-47 |
| Msa1426910 | Msa1463010 | 0.852278 | 5.128228e-61 | -8.615850e-47 |
| Msa1431170 | Msa1463010 | 0.810291 | 1.240002e-50 | -8.615850e-47 |
| Msa1434040 | Msa1463010 | 0.826204 | 3.083488e-54 | -8.615850e-47 |
| Msa1435260 | Msa1463010 | 0.822069 | 2.885168e-53 | -8.615850e-47 |
| Msa1438520 | Msa1463010 | 0.828906 | 6.929609e-55 | -8.615850e-47 |
| Msa1439610 | Msa1463010 | 0.822688 | 2.072026e-53 | -8.615850e-47 |
| Msa1440900 | Msa1463010 | 0.800381 | 1.480132e-48 | -8.615850e-47 |
| Msa1443310 | Msa1463010 | 0.811669 | 6.237296e-51 | -8.615850e-47 |
| Msa1446780 | Msa1463010 | 0.812625 | 3.858938e-51 | -8.615850e-47 |
| Msa1450720 | Msa1463010 | 0.846850 | 1.675648e-59 | -8.615850e-47 |
| Msa1454960 | Msa1463010 | 0.819015 | 1.449483e-52 | -8.615850e-47 |
| Msa1456230 | Msa1463010 | 0.809039 | 2.303954e-50 | -8.615850e-47 |
| Msa1458340 | Msa1463010 | 0.818289 | 2.118332e-52 | -8.615850e-47 |
| Msa1461540 | Msa1463010 | 0.821528 | 3.848411e-53 | -8.615850e-47 |
| Msa1462660 | Msa1463010 | 0.806371 | 8.499011e-50 | -8.615850e-47 |
| Msa1463010 | Msa1463030 | 0.849693 | 2.745324e-60 | -8.615850e-47 |
| Msa1463010 | Msa1464370 | 0.803279 | 3.760686e-49 | -8.615850e-47 |
| Msa1463010 | Msa1466590 | 0.816131 | 6.476800e-52 | -8.615850e-47 |
| Msa1463010 | Msa1467000 | 0.846240 | 2.459582e-59 | -8.615850e-47 |
| Msa0607320 | Msa1463010 | 0.822296 | 2.556045e-53 | -8.615850e-47 |
| Msa0616450 | Msa1463010 | 0.800974 | 1.120512e-48 | -8.615850e-47 |
| Msa0619420 | Msa1463010 | 0.814795 | 1.284309e-51 | -8.615850e-47 |
| Msa0624680 | Msa1463010 | 0.810065 | 1.387452e-50 | -8.615850e-47 |
| Msa0626270 | Msa1463010 | 0.862877 | 3.712269e-64 | -8.615850e-47 |
| Msa0626460 | Msa1463010 | 0.836004 | 1.206480e-56 | -8.615850e-47 |
| Msa0628420 | Msa1463010 | 0.821891 | 3.171766e-53 | -8.615850e-47 |
| Msa0638350 | Msa1463010 | 0.808319 | 3.282804e-50 | -8.615850e-47 |
| Msa0638360 | Msa1463010 | 0.822705 | 2.053172e-53 | -8.615850e-47 |
| Msa0640940 | Msa1463010 | 0.804622 | 1.977728e-49 | -8.615850e-47 |
| Msa0641730 | Msa1463010 | 0.804205 | 2.415166e-49 | -8.615850e-47 |
| Msa0647430 | Msa1463010 | 0.833638 | 4.753603e-56 | -8.615850e-47 |
| Msa0652690 | Msa1463010 | 0.830247 | 3.270770e-55 | -8.615850e-47 |
| Msa0655920 | Msa1463010 | 0.808123 | 3.614070e-50 | -8.615850e-47 |
| Msa0659550 | Msa1463010 | 0.815655 | 8.270624e-52 | -8.615850e-47 |
| Msa0661320 | Msa1463010 | 0.818165 | 2.260256e-52 | -8.615850e-47 |
| Msa0664540 | Msa1463010 | 0.847232 | 1.317125e-59 | -8.615850e-47 |
| Msa0669180 | Msa1463010 | 0.800435 | 1.443433e-48 | -8.615850e-47 |
| Msa0687450 | Msa1463010 | 0.823797 | 1.141712e-53 | -8.615850e-47 |
| Msa0689420 | Msa1463010 | 0.822543 | 2.239822e-53 | -8.615850e-47 |
| Msa0689760 | Msa1463010 | 0.863949 | 1.727653e-64 | -8.615850e-47 |
| Msa0690310 | Msa1463010 | 0.803203 | 3.898632e-49 | -8.615850e-47 |
| Msa0691340 | Msa1463010 | 0.800058 | 1.722017e-48 | -8.615850e-47 |
| Msa0696850 | Msa1463010 | 0.826426 | 2.730590e-54 | -8.615850e-47 |
| Msa0696860 | Msa1463010 | 0.817695 | 2.885987e-52 | -8.615850e-47 |
| Msa0697720 | Msa1463010 | 0.801468 | 8.879036e-49 | -8.615850e-47 |
| Msa0698100 | Msa1463010 | 0.846329 | 2.325845e-59 | -8.615850e-47 |
| Msa0705390 | Msa1463010 | 0.824751 | 6.810122e-54 | -8.615850e-47 |
| Msa0712260 | Msa1463010 | 0.806715 | 7.191142e-50 | -8.615850e-47 |
| Msa0713680 | Msa1463010 | 0.807814 | 4.205156e-50 | -8.615850e-47 |
| Msa0713870 | Msa1463010 | 0.817365 | 3.423904e-52 | -8.615850e-47 |
| Msa0716860 | Msa1463010 | 0.845945 | 2.957863e-59 | -8.615850e-47 |
| Msa0749400 | Msa1463010 | 0.862246 | 5.804065e-64 | -8.615850e-47 |
| Msa0750250 | Msa1463010 | 0.805998 | 1.018257e-49 | -8.615850e-47 |
| Msa0751260 | Msa1463010 | 0.800956 | 1.130015e-48 | -8.615850e-47 |
| Msa0756380 | Msa1463010 | 0.802868 | 4.574254e-49 | -8.615850e-47 |
| Msa0757800 | Msa1463010 | 0.810556 | 1.087015e-50 | -8.615850e-47 |
| Msa0789560 | Msa1463010 | 0.846538 | 2.040168e-59 | -8.615850e-47 |
| Msa0800700 | Msa1463010 | 0.814536 | 1.465345e-51 | -8.615850e-47 |
| Msa0124200 | Msa1463010 | 0.805369 | 1.380277e-49 | -8.615850e-47 |
| Msa0126230 | Msa1463010 | 0.830285 | 3.201238e-55 | -8.615850e-47 |
| Msa0133720 | Msa1463010 | 0.810444 | 1.149303e-50 | -8.615850e-47 |
| Msa0133820 | Msa1463010 | 0.820694 | 5.989765e-53 | -8.615850e-47 |
| Msa0137540 | Msa1463010 | 0.804374 | 2.227292e-49 | -8.615850e-47 |
| Msa0141400 | Msa1463010 | 0.821188 | 4.609716e-53 | -8.615850e-47 |
| Msa0143850 | Msa1463010 | 0.831932 | 1.261081e-55 | -8.615850e-47 |
| Msa0144360 | Msa1463010 | 0.835092 | 2.051422e-56 | -8.615850e-47 |
| Msa0144780 | Msa1463010 | 0.818063 | 2.383593e-52 | -8.615850e-47 |
| Msa0147980 | Msa1463010 | 0.802492 | 5.468948e-49 | -8.615850e-47 |
| Msa0160670 | Msa1463010 | 0.819590 | 1.072558e-52 | -8.615850e-47 |
| Msa0168570 | Msa1463010 | 0.829202 | 5.874517e-55 | -8.615850e-47 |
| Msa0171200 | Msa1463010 | 0.800149 | 1.649944e-48 | -8.615850e-47 |
| Msa0173800 | Msa1463010 | 0.804224 | 2.393296e-49 | -8.615850e-47 |
| Msa0177170 | Msa1463010 | 0.801418 | 9.087215e-49 | -8.615850e-47 |
| Msa0183420 | Msa1463010 | 0.812032 | 5.200096e-51 | -8.615850e-47 |
| Msa0192640 | Msa1463010 | 0.810141 | 1.335998e-50 | -8.615850e-47 |
| Msa0210260 | Msa1463010 | 0.808256 | 3.385875e-50 | -8.615850e-47 |
| Msa0218350 | Msa1463010 | 0.802443 | 5.596264e-49 | -8.615850e-47 |
| Msa0220730 | Msa1463010 | 0.814500 | 1.492869e-51 | -8.615850e-47 |
| Msa0225480 | Msa1463010 | 0.830376 | 3.040530e-55 | -8.615850e-47 |
| Msa0225670 | Msa1463010 | 0.813724 | 2.214489e-51 | -8.615850e-47 |
| Msa0230370 | Msa1463010 | 0.815642 | 8.328270e-52 | -8.615850e-47 |
| Msa0231190 | Msa1463010 | 0.816317 | 5.884266e-52 | -8.615850e-47 |
| Msa0236770 | Msa1463010 | 0.811458 | 6.929763e-51 | -8.615850e-47 |
| Msa0237200 | Msa1463010 | 0.820272 | 7.486921e-53 | -8.615850e-47 |
| Msa0237210 | Msa1463010 | 0.834793 | 2.440197e-56 | -8.615850e-47 |
| Msa1227320 | Msa1463010 | 0.812915 | 3.333090e-51 | -8.615850e-47 |
| Msa1234620 | Msa1463010 | 0.801677 | 8.042002e-49 | -8.615850e-47 |
| Msa1253450 | Msa1463010 | 0.811274 | 7.598730e-51 | -8.615850e-47 |
| Msa1254620 | Msa1463010 | 0.860419 | 2.092655e-63 | -8.615850e-47 |
| Msa1259640 | Msa1463010 | 0.842160 | 3.064511e-58 | -8.615850e-47 |
| Msa1265590 | Msa1463010 | 0.804857 | 1.766501e-49 | -8.615850e-47 |
| Msa1277080 | Msa1463010 | 0.809420 | 1.909352e-50 | -8.615850e-47 |
| Msa1282500 | Msa1463010 | 0.810677 | 1.023208e-50 | -8.615850e-47 |
| Msa1283740 | Msa1463010 | 0.847211 | 1.335059e-59 | -8.615850e-47 |
| Msa1286570 | Msa1463010 | 0.825999 | 3.450106e-54 | -8.615850e-47 |
| Msa1299330 | Msa1463010 | 0.806167 | 9.380256e-50 | -8.615850e-47 |
| Msa1304810 | Msa1463010 | 0.807574 | 4.728869e-50 | -8.615850e-47 |
| Msa1323690 | Msa1463010 | 0.806272 | 8.916528e-50 | -8.615850e-47 |
| Msa1328640 | Msa1463010 | 0.819277 | 1.263784e-52 | -8.615850e-47 |
| Msa1329790 | Msa1463010 | 0.853508 | 2.281112e-61 | -8.615850e-47 |
| Msa1335160 | Msa1463010 | 0.812059 | 5.129890e-51 | -8.615850e-47 |
| Msa1336040 | Msa1463010 | 0.829239 | 5.751808e-55 | -8.615850e-47 |
| Msa1340130 | Msa1463010 | 0.830362 | 3.064426e-55 | -8.615850e-47 |
| Msa1344310 | Msa1463010 | 0.801996 | 6.917092e-49 | -8.615850e-47 |
| Msa0377440 | Msa1463010 | 0.804560 | 2.037245e-49 | -8.615850e-47 |
| Msa0378970 | Msa1463010 | 0.814536 | 1.465815e-51 | -8.615850e-47 |
| Msa0379610 | Msa1463010 | 0.842784 | 2.093214e-58 | -8.615850e-47 |
| Msa0382370 | Msa1463010 | 0.861569 | 9.358818e-64 | -8.615850e-47 |
| Msa0394690 | Msa1463010 | 0.809658 | 1.696775e-50 | -8.615850e-47 |
| Msa0395980 | Msa1463010 | 0.862651 | 4.356653e-64 | -8.615850e-47 |
| Msa0411410 | Msa1463010 | 0.808666 | 2.768934e-50 | -8.615850e-47 |
| Msa0423840 | Msa1463010 | 0.845821 | 3.196595e-59 | -8.615850e-47 |
| Msa0432160 | Msa1463010 | 0.857718 | 1.348545e-62 | -8.615850e-47 |
| Msa0432170 | Msa1463010 | 0.841992 | 3.393706e-58 | -8.615850e-47 |
| Msa0432670 | Msa1463010 | 0.812955 | 3.267894e-51 | -8.615850e-47 |
| Msa0440510 | Msa1463010 | 0.836475 | 9.157856e-57 | -8.615850e-47 |
| Msa0450360 | Msa1463010 | 0.810453 | 1.143809e-50 | -8.615850e-47 |
| Msa0450400 | Msa1463010 | -0.820535 | 6.517188e-53 | -8.615850e-47 |
| Msa0468250 | Msa1463010 | 0.829738 | 4.352426e-55 | -8.615850e-47 |
| Msa0473330 | Msa1463010 | 0.810244 | 1.269158e-50 | -8.615850e-47 |
| Msa0473980 | Msa1463010 | 0.828069 | 1.103215e-54 | -8.615850e-47 |
| Msa0474940 | Msa1463010 | 0.814061 | 1.865806e-51 | -8.615850e-47 |
| Msa0476680 | Msa1463010 | 0.864043 | 1.615255e-64 | -8.615850e-47 |
| Msa0476690 | Msa1463010 | 0.816511 | 5.324473e-52 | -8.615850e-47 |
| Msa0480780 | Msa1463010 | 0.832016 | 1.201977e-55 | -8.615850e-47 |
| Msa0481970 | Msa1463010 | 0.809197 | 2.131692e-50 | -8.615850e-47 |
| Msa0985220 | Msa1463010 | 0.820789 | 5.696411e-53 | -8.615850e-47 |
| Msa0986510 | Msa1463010 | 0.823767 | 1.160216e-53 | -8.615850e-47 |
| Msa0989530 | Msa1463010 | 0.801025 | 1.093577e-48 | -8.615850e-47 |
| Msa0995370 | Msa1463010 | 0.807562 | 4.758074e-50 | -8.615850e-47 |
| Msa0996020 | Msa1463010 | 0.801565 | 8.479230e-49 | -8.615850e-47 |
| Msa1002960 | Msa1463010 | 0.830165 | 3.424849e-55 | -8.615850e-47 |
| Msa1010070 | Msa1463010 | 0.828086 | 1.093248e-54 | -8.615850e-47 |
| Msa1020940 | Msa1463010 | 0.813637 | 2.314128e-51 | -8.615850e-47 |
| Msa1028280 | Msa1463010 | 0.826457 | 2.684742e-54 | -8.615850e-47 |
| Msa1034500 | Msa1463010 | 0.814634 | 1.394224e-51 | -8.615850e-47 |
| Msa1041670 | Msa1463010 | 0.804384 | 2.216549e-49 | -8.615850e-47 |
| Msa1050910 | Msa1463010 | 0.825003 | 5.941110e-54 | -8.615850e-47 |
| Msa1050960 | Msa1463010 | 0.818989 | 1.470008e-52 | -8.615850e-47 |
| Msa1051600 | Msa1463010 | 0.809151 | 2.180486e-50 | -8.615850e-47 |
| Msa1065430 | Msa1463010 | 0.809657 | 1.697833e-50 | -8.615850e-47 |
| Msa1072600 | Msa1463010 | 0.829651 | 4.569644e-55 | -8.615850e-47 |
| Msa1076560 | Msa1463010 | 0.813141 | 2.973896e-51 | -8.615850e-47 |
| Msa1079860 | Msa1463010 | 0.819905 | 9.085800e-53 | -8.615850e-47 |
| Msa1088410 | Msa1463010 | 0.810965 | 8.866690e-51 | -8.615850e-47 |
| Msa1095790 | Msa1463010 | 0.843907 | 1.049461e-58 | -8.615850e-47 |
| Msa1098890 | Msa1463010 | 0.834822 | 2.400119e-56 | -8.615850e-47 |
| Msa0241830 | Msa1463010 | 0.812045 | 5.165691e-51 | -8.615850e-47 |
| Msa0244970 | Msa1463010 | 0.818150 | 2.277375e-52 | -8.615850e-47 |
| Msa0249310 | Msa1463010 | 0.817021 | 4.092557e-52 | -8.615850e-47 |
| Msa0259220 | Msa1463010 | 0.807081 | 6.015664e-50 | -8.615850e-47 |
| Msa0263710 | Msa1463010 | 0.813221 | 2.857072e-51 | -8.615850e-47 |
| Msa0274970 | Msa1463010 | 0.820747 | 5.825090e-53 | -8.615850e-47 |
| Msa0274980 | Msa1463010 | 0.802787 | 4.753010e-49 | -8.615850e-47 |
| Msa0279390 | Msa1463010 | 0.800323 | 1.520892e-48 | -8.615850e-47 |
| Msa0279850 | Msa1463010 | 0.825054 | 5.778568e-54 | -8.615850e-47 |
| Msa0287790 | Msa1463010 | 0.810820 | 9.531830e-51 | -8.615850e-47 |
| Msa0302890 | Msa1463010 | 0.832522 | 9.008971e-56 | -8.615850e-47 |
| Msa0304100 | Msa1463010 | 0.817568 | 3.083055e-52 | -8.615850e-47 |
| Msa0305330 | Msa1463010 | 0.824161 | 9.377757e-54 | -8.615850e-47 |
| Msa0307860 | Msa1463010 | 0.804423 | 2.175403e-49 | -8.615850e-47 |
| Msa0312530 | Msa1463010 | 0.808033 | 3.777219e-50 | -8.615850e-47 |
| Msa0312910 | Msa1463010 | 0.810557 | 1.086542e-50 | -8.615850e-47 |
| Msa0315680 | Msa1463010 | 0.822523 | 2.263381e-53 | -8.615850e-47 |
| Msa0315690 | Msa1463010 | 0.817837 | 2.680234e-52 | -8.615850e-47 |
| Msa0317970 | Msa1463010 | 0.806888 | 6.607900e-50 | -8.615850e-47 |
| Msa0318880 | Msa1463010 | 0.820264 | 7.519340e-53 | -8.615850e-47 |
| Msa0322900 | Msa1463010 | 0.838211 | 3.291210e-57 | -8.615850e-47 |
| Msa0323260 | Msa1463010 | 0.810476 | 1.131131e-50 | -8.615850e-47 |
| Msa0341840 | Msa1463010 | 0.825851 | 3.741235e-54 | -8.615850e-47 |
| Msa0342010 | Msa1463010 | 0.806824 | 6.817789e-50 | -8.615850e-47 |
| Msa0342400 | Msa1463010 | 0.801274 | 9.726615e-49 | -8.615850e-47 |
| Msa0343300 | Msa1463010 | 0.811459 | 6.928061e-51 | -8.615850e-47 |
| Msa0347950 | Msa1463010 | 0.806340 | 8.627063e-50 | -8.615850e-47 |
| Msa0347990 | Msa1463010 | 0.825651 | 4.173788e-54 | -8.615850e-47 |
| Msa0358400 | Msa1463010 | 0.848900 | 4.564312e-60 | -8.615850e-47 |
| Msa0362890 | Msa1463010 | 0.837671 | 4.528526e-57 | -8.615850e-47 |
| Msa0363400 | Msa1463010 | 0.826173 | 3.137142e-54 | -8.615850e-47 |
| Msa1121110 | Msa1463010 | 0.801585 | 8.401430e-49 | -8.615850e-47 |
| Msa1122780 | Msa1463010 | 0.802074 | 6.666049e-49 | -8.615850e-47 |
| Msa1127430 | Msa1463010 | 0.831208 | 1.901184e-55 | -8.615850e-47 |
| Msa1127540 | Msa1463010 | 0.810708 | 1.007870e-50 | -8.615850e-47 |
| Msa1127590 | Msa1463010 | 0.800102 | 1.687340e-48 | -8.615850e-47 |
| Msa1161810 | Msa1463010 | 0.800827 | 1.200541e-48 | -8.615850e-47 |
| Msa1168550 | Msa1463010 | 0.805485 | 1.304788e-49 | -8.615850e-47 |
| Msa1168590 | Msa1463010 | 0.810885 | 9.228604e-51 | -8.615850e-47 |
| Msa1188180 | Msa1463010 | 0.830393 | 3.012634e-55 | -8.615850e-47 |
| Msa1201640 | Msa1463010 | 0.850325 | 1.827223e-60 | -8.615850e-47 |
| Msa1201810 | Msa1463010 | 0.804006 | 2.657594e-49 | -8.615850e-47 |
| Msa1205480 | Msa1463010 | 0.807663 | 4.529337e-50 | -8.615850e-47 |
| Msa1211340 | Msa1463010 | 0.845940 | 2.968375e-59 | -8.615850e-47 |
| Msa1215070 | Msa1463010 | 0.808251 | 3.394164e-50 | -8.615850e-47 |
| Msa0483740 | Msa1463010 | 0.822336 | 2.502059e-53 | -8.615850e-47 |
| Msa0485240 | Msa1463010 | 0.826451 | 2.693106e-54 | -8.615850e-47 |
| Msa0491000 | Msa1463010 | 0.850093 | 2.121184e-60 | -8.615850e-47 |
| Msa0510290 | Msa1463010 | 0.839663 | 1.384927e-57 | -8.615850e-47 |
| Msa0515710 | Msa1463010 | 0.812033 | 5.196809e-51 | -8.615850e-47 |
| Msa0516020 | Msa1463010 | 0.800728 | 1.257648e-48 | -8.615850e-47 |
| Msa0518960 | Msa1463010 | 0.845636 | 3.589652e-59 | -8.615850e-47 |
| Msa0521010 | Msa1463010 | 0.861524 | 9.657747e-64 | -8.615850e-47 |
| Msa0531250 | Msa1463010 | 0.835956 | 1.240690e-56 | -8.615850e-47 |
| Msa0534980 | Msa1463010 | 0.803965 | 2.710043e-49 | -8.615850e-47 |
| Msa0544730 | Msa1463010 | 0.809735 | 1.633966e-50 | -8.615850e-47 |
| Msa0553200 | Msa1463010 | 0.829255 | 5.701430e-55 | -8.615850e-47 |
| Msa0560500 | Msa1463010 | 0.813922 | 2.002460e-51 | -8.615850e-47 |
| Msa0576680 | Msa1463010 | 0.819501 | 1.123479e-52 | -8.615850e-47 |
| Msa0588090 | Msa1463010 | 0.824821 | 6.558726e-54 | -8.615850e-47 |
| Msa0597770 | Msa1463010 | 0.853533 | 2.243982e-61 | -8.615850e-47 |
| Msa0601950 | Msa1463010 | 0.834025 | 3.804885e-56 | -8.615850e-47 |
| Msa0855870 | Msa1463010 | 0.801071 | 1.070482e-48 | -8.615850e-47 |
| Msa0868160 | Msa1463010 | 0.815548 | 8.735746e-52 | -8.615850e-47 |
| Msa0870650 | Msa1463010 | 0.816866 | 4.434726e-52 | -8.615850e-47 |
| Msa0881350 | Msa1463010 | 0.800869 | 1.176957e-48 | -8.615850e-47 |
| Msa0899970 | Msa1463010 | 0.810645 | 1.039894e-50 | -8.615850e-47 |
| Msa0903780 | Msa1463010 | 0.846706 | 1.834620e-59 | -8.615850e-47 |
| Msa0905590 | Msa1463010 | 0.832491 | 9.170136e-56 | -8.615850e-47 |
| Msa0909770 | Msa1463010 | 0.800988 | 1.112868e-48 | -8.615850e-47 |
| Msa0926670 | Msa1463010 | 0.815550 | 8.729914e-52 | -8.615850e-47 |
| Msa0934140 | Msa1463010 | 0.806503 | 7.970093e-50 | -8.615850e-47 |
| Msa0937430 | Msa1463010 | 0.866945 | 1.966932e-65 | -8.615850e-47 |
| Msa0945240 | Msa1463010 | 0.832573 | 8.750067e-56 | -8.615850e-47 |
| Msa0959520 | Msa1463010 | 0.817190 | 3.750227e-52 | -8.615850e-47 |
| Msa0969330 | Msa1463010 | 0.847727 | 9.629144e-60 | -8.615850e-47 |
| Msa0971650 | Msa1463010 | 0.823171 | 1.598639e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463010 | MtrunA17_Chr1g0210711 | 93.494 | 415 | 26 | 1 | 1 | 415 | 258 | 671 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463010 | AT3G60740.1 | 71.635 | 416 | 110 | 4 | 3 | 414 | 265 | 676 | 0.0 | 614 |
| Msa1463010 | AT3G60740.2 | 71.635 | 416 | 110 | 4 | 3 | 414 | 193 | 604 | 0.0 | 614 |
| Msa1463010 | AT3G60740.3 | 71.635 | 416 | 110 | 4 | 3 | 414 | 265 | 676 | 0.0 | 613 |
Find 91 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGAGAATCAGTCCAATT+TGG | 0.251679 | tig0042887:+2565 | Msa1463010:CDS |
| GGCAAGTAAGCCCAATCCTT+TGG | 0.299357 | tig0042887:-1564 | Msa1463010:intergenic |
| ATTGGACTGATTCTCTTTGC+TGG | 0.300760 | tig0042887:-2561 | Msa1463010:intergenic |
| ATTCAAAGTAATATTTAGTT+TGG | 0.318807 | tig0042887:-2534 | Msa1463010:intergenic |
| GCTATCTGGTTTGAGGGATA+TGG | 0.326090 | tig0042887:+2688 | Msa1463010:CDS |
| TATACACTCATGGCGTTATA+CGG | 0.329124 | tig0042887:+1597 | Msa1463010:CDS |
| CTTCAATGGCTCCAAGTAAC+TGG | 0.330263 | tig0042887:-546 | Msa1463010:intergenic |
| TGAGGCAGAAGATGAGGATA+TGG | 0.341770 | tig0042887:+2628 | Msa1463010:CDS |
| ATCATTGAGATGTTGCTATC+TGG | 0.342371 | tig0042887:+2674 | Msa1463010:CDS |
| ATTGTTGTTCGCACCCAAAT+TGG | 0.347980 | tig0042887:-2579 | Msa1463010:intergenic |
| ATCTGACTTGTGCATGCGCC+AGG | 0.369089 | tig0042887:+6743 | Msa1463010:CDS |
| CAGGGTGCAACATTGGCAAC+TGG | 0.369665 | tig0042887:+6762 | Msa1463010:CDS |
| ACAACAACAGGAACAACTTT+GGG | 0.386630 | tig0042887:-4879 | Msa1463010:intergenic |
| CACAACAACAGGAACAACTT+TGG | 0.396400 | tig0042887:-4880 | Msa1463010:intergenic |
| GCACATAATTTCCAGTTACT+TGG | 0.399167 | tig0042887:+535 | Msa1463010:CDS |
| AAAGAGAATCAGTCCAATTT+GGG | 0.404028 | tig0042887:+2566 | Msa1463010:CDS |
| TTGATGTAATTCCTATCGTT+TGG | 0.406554 | tig0042887:+1464 | Msa1463010:CDS |
| GCATATGTATGCTGGGCATT+TGG | 0.411922 | tig0042887:+5185 | Msa1463010:CDS |
| GCAAGTAAGCCCAATCCTTT+GGG | 0.415626 | tig0042887:-1563 | Msa1463010:intergenic |
| ATGCTGCTGCATATGTATGC+TGG | 0.415728 | tig0042887:+5177 | Msa1463010:CDS |
| TGCTGCTGCATATGTATGCT+GGG | 0.431673 | tig0042887:+5178 | Msa1463010:CDS |
| TGAAGTTAACCCAAAGGATT+GGG | 0.436826 | tig0042887:+1554 | Msa1463010:CDS |
| CAGGGCGAGGGTTCATGGCA+TGG | 0.439284 | tig0042887:+4798 | Msa1463010:intron |
| ATCTGTAATTTCAATTGAGT+TGG | 0.439713 | tig0042887:-2606 | Msa1463010:intergenic |
| CAAAGTAATATTTAGTTTGG+TGG | 0.440003 | tig0042887:-2531 | Msa1463010:intergenic |
| AATAGCAGCCAGTGCTTCAA+TGG | 0.440109 | tig0042887:-560 | Msa1463010:intergenic |
| AATACCACCTTCACAACAAC+AGG | 0.444754 | tig0042887:-4891 | Msa1463010:intergenic |
| TCCATTTGTGAGTGACCTGC+TGG | 0.446587 | tig0042887:+5561 | Msa1463010:CDS |
| CCTGCCGTCCAACATTCTCC+TGG | 0.461564 | tig0042887:-5420 | None:intergenic |
| ATTGCTTCAGCTTTGTCGAT+TGG | 0.462379 | tig0042887:+479 | None:intergenic |
| CCAGGAGAATGTTGGACGGC+AGG | 0.464798 | tig0042887:+5420 | Msa1463010:CDS |
| ATGAAGTTAACCCAAAGGAT+TGG | 0.464952 | tig0042887:+1553 | Msa1463010:CDS |
| GATGTTGCTATCTGGTTTGA+GGG | 0.466934 | tig0042887:+2682 | Msa1463010:CDS |
| AGATGTTGCTATCTGGTTTG+AGG | 0.477416 | tig0042887:+2681 | Msa1463010:CDS |
| TAATGGACGTCGAGCTGCGA+TGG | 0.480249 | tig0042887:-1515 | Msa1463010:intergenic |
| TCCAGCAGGTCACTCACAAA+TGG | 0.480671 | tig0042887:-5562 | Msa1463010:intergenic |
| AGGATAAAACCTCCTCAGAA+AGG | 0.493867 | tig0042887:-4285 | Msa1463010:intergenic |
| ATCAGATGCTTGCGGAGTAA+TGG | 0.494080 | tig0042887:-1532 | Msa1463010:intergenic |
| CGTACTTTACAAGAAAAGAA+AGG | 0.496768 | tig0042887:-6665 | Msa1463010:intergenic |
| CATATTATCACACAGATATG+AGG | 0.498066 | tig0042887:+5213 | Msa1463010:CDS |
| GACGTCTTCCCTTTCTGAGG+AGG | 0.501611 | tig0042887:+4276 | Msa1463010:CDS |
| TGGTCTGCAGCGAAAGGTAT+TGG | 0.507925 | tig0042887:+4235 | Msa1463010:CDS |
| CGTAGCATGCCACTGTTAAG+AGG | 0.509884 | tig0042887:-5262 | Msa1463010:intergenic |
| ACTTGGAGCCATTGAAGCAC+TGG | 0.514918 | tig0042887:+552 | Msa1463010:CDS |
| ACAACTTTGGGAAGACTAGC+AGG | 0.518043 | tig0042887:-4867 | Msa1463010:intergenic |
| CAGAAGTATCATACCTCACC+AGG | 0.520075 | tig0042887:-4328 | Msa1463010:intergenic |
| GAAGAGGTCCGCATAGTGTC+GGG | 0.521843 | tig0042887:+5141 | Msa1463010:CDS |
| GGATAAAACCTCCTCAGAAA+GGG | 0.523213 | tig0042887:-4284 | Msa1463010:intergenic |
| AGGGTGCAACATTGGCAACT+GGG | 0.527754 | tig0042887:+6763 | Msa1463010:CDS |
| CGAAGAGGTCCGCATAGTGT+CGG | 0.532583 | tig0042887:+5140 | Msa1463010:CDS |
| GTACTTTACAAGAAAAGAAA+GGG | 0.536397 | tig0042887:-6664 | Msa1463010:intergenic |
| AGTTGTTCCTGTTGTTGTGA+AGG | 0.536707 | tig0042887:+4884 | Msa1463010:CDS |
| CAGGAGAATGTTGGACGGCA+GGG | 0.537816 | tig0042887:+5421 | Msa1463010:CDS |
| GCAGCTTTCCAGGAGAATGT+TGG | 0.541201 | tig0042887:+5412 | Msa1463010:CDS |
| CATGCGCCAGGGTGCAACAT+TGG | 0.546451 | tig0042887:+6755 | Msa1463010:CDS |
| GCATGGAGGCTGCTTAGCGT+TGG | 0.548597 | tig0042887:+4815 | Msa1463010:CDS |
| TTCGTATTGAGCGACGGAGA+TGG | 0.550956 | tig0042887:-5527 | Msa1463010:intergenic |
| TTCCTCATCGTATACACTCA+TGG | 0.553667 | tig0042887:+1587 | Msa1463010:CDS |
| CATGAGAGAACTTGCTGCAG+AGG | 0.556855 | tig0042887:+6641 | Msa1463010:CDS |
| TGTTCCTGTTGTTGTGAAGG+TGG | 0.557823 | tig0042887:+4887 | Msa1463010:CDS |
| GTCCGTTGGTCTGCAGCGAA+AGG | 0.563885 | tig0042887:+4229 | Msa1463010:CDS |
| TACAGATGAGGCAGAAGATG+AGG | 0.575639 | tig0042887:+2622 | Msa1463010:CDS |
| TACCTTTCGCTGCAGACCAA+CGG | 0.577331 | tig0042887:-4231 | Msa1463010:intergenic |
| TGTAGAACACTGTTGTCCGT+TGG | 0.577807 | tig0042887:+4215 | Msa1463010:intron |
| TTTATAAGCAGGCAGGCAGT+CGG | 0.587442 | tig0042887:+1431 | Msa1463010:intron |
| TTGGCTGAACTTTCTCGTAG+AGG | 0.588332 | tig0042887:+4834 | Msa1463010:CDS |
| CTCAATTGAAATTACAGATG+AGG | 0.588966 | tig0042887:+2610 | Msa1463010:CDS |
| ATCTGATGAAGTTAACCCAA+AGG | 0.590595 | tig0042887:+1548 | Msa1463010:CDS |
| TTTGACGTCTTCCCTTTCTG+AGG | 0.591409 | tig0042887:+4273 | Msa1463010:CDS |
| AAGTCAGATGAAAGAGTACA+AGG | 0.594785 | tig0042887:-6729 | Msa1463010:intergenic |
| ATCTCCGTCGCTCAATACGA+AGG | 0.596338 | tig0042887:+5529 | Msa1463010:CDS |
| CGGCAGGGAAATTATCCGCA+TGG | 0.611227 | tig0042887:+5436 | Msa1463010:CDS |
| TTAACTTCATCAGATGCTTG+CGG | 0.613349 | tig0042887:-1540 | Msa1463010:intergenic |
| GGGTGCAACATTGGCAACTG+GGG | 0.630222 | tig0042887:+6764 | Msa1463010:CDS |
| CAGTTGCCAATGTTGCACCC+TGG | 0.631333 | tig0042887:-6761 | Msa1463010:intergenic |
| CATGCCACTGTTAAGAGGTG+CGG | 0.634247 | tig0042887:-5257 | Msa1463010:intergenic |
| GAAGTGTCGTTCCAAACGAT+AGG | 0.635423 | tig0042887:-1475 | Msa1463010:intergenic |
| GGCGAGGGTTCATGGCATGG+AGG | 0.638162 | tig0042887:+4801 | Msa1463010:CDS |
| TCTGACTTGTGCATGCGCCA+GGG | 0.638598 | tig0042887:+6744 | Msa1463010:CDS |
| CGCCATGAGTGTATACGATG+AGG | 0.642907 | tig0042887:-1589 | Msa1463010:intergenic |
| ATGAGTGTATACGATGAGGA+AGG | 0.642958 | tig0042887:-1585 | Msa1463010:intergenic |
| ACATTAGACCCGACACTATG+CGG | 0.661051 | tig0042887:-5149 | Msa1463010:intergenic |
| CTTTGTCGATTGGACACACG+AGG | 0.669582 | tig0042887:+489 | Msa1463010:five_prime_UTR |
| CTGCATTACGATGTTCGAAG+AGG | 0.669783 | tig0042887:+5125 | Msa1463010:CDS |
| ATATCCTTCGTATTGAGCGA+CGG | 0.671733 | tig0042887:-5533 | Msa1463010:intergenic |
| TGAAAACAGCTCCAAAACAG+AGG | 0.672305 | tig0042887:-4305 | Msa1463010:intergenic |
| CTTTCCAGGAGAATGTTGGA+CGG | 0.674974 | tig0042887:+5416 | Msa1463010:CDS |
| ACAGCACTCGCAAAATACTG+AGG | 0.708253 | tig0042887:-6690 | Msa1463010:intergenic |
| TGCTCCGCACCTCTTAACAG+TGG | 0.708690 | tig0042887:+5253 | Msa1463010:CDS |
| TTCACAATGTCAATGCCATG+CGG | 0.709541 | tig0042887:-5451 | Msa1463010:intergenic |
| AGTGGCATGCTACGACCGTG+AGG | 0.715403 | tig0042887:+5271 | Msa1463010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACTTATATAATAATTTG+AGG | + | tig0042887:1056-1075 | Msa1463010:intron | 10.0% |
| !! | TAACTTATATAATAATTTGA+GGG | + | tig0042887:1057-1076 | Msa1463010:intron | 10.0% |
| !! | AAAAACTTGATATTTAATTA+GGG | - | tig0042887:4715-4734 | Msa1463010:intergenic | 10.0% |
| !! | AAAAAACTTGATATTTAATT+AGG | - | tig0042887:4716-4735 | Msa1463010:intergenic | 10.0% |
| !!! | TAATTAAATATCAAGTTTTT+TGG | + | tig0042887:4715-4734 | Msa1463010:intron | 10.0% |
| !! | AAAAAAAATACATAATCATT+AGG | - | tig0042887:5715-5734 | Msa1463010:intergenic | 10.0% |
| !! | AAAACTCAAAATTGAAATTA+AGG | - | tig0042887:617-636 | Msa1463010:intergenic | 15.0% |
| !!! | TAATTTCAATTTTGAGTTTT+TGG | + | tig0042887:617-636 | Msa1463010:intron | 15.0% |
| !!! | AATTTCAATTTTGAGTTTTT+GGG | + | tig0042887:618-637 | Msa1463010:intron | 15.0% |
| !! | AATATTAGCAATATATTTGA+TGG | + | tig0042887:948-967 | Msa1463010:intron | 15.0% |
| !! | CAAATAACTTCATAAAAATA+AGG | - | tig0042887:1089-1108 | Msa1463010:intergenic | 15.0% |
| !! | AAGTAGAAATAAACAAAATA+TGG | - | tig0042887:1704-1723 | Msa1463010:intergenic | 15.0% |
| !! | ATTCAAAGTAATATTTAGTT+TGG | - | tig0042887:2537-2556 | Msa1463010:intergenic | 15.0% |
| !!! | TTAAGCACTTTTAAATATAA+AGG | + | tig0042887:3205-3224 | Msa1463010:intron | 15.0% |
| !! | ATATAATTTATTCAGATGAA+TGG | + | tig0042887:3478-3497 | Msa1463010:intron | 15.0% |
| !! | TGATATTATGATTTAAGTAA+AGG | + | tig0042887:4565-4584 | Msa1463010:intron | 15.0% |
| !!! | TCAAATTCAATAATTTTTTC+AGG | + | tig0042887:4779-4798 | Msa1463010:intron | 15.0% |
| !!! | CAAATTCAATAATTTTTTCA+GGG | + | tig0042887:4780-4799 | Msa1463010:intron | 15.0% |
| !! | AAATATACATACATATACAA+GGG | - | tig0042887:5679-5698 | Msa1463010:intergenic | 15.0% |
| !! | TAAATATACATACATATACA+AGG | - | tig0042887:5680-5699 | Msa1463010:intergenic | 15.0% |
| !!! | TAATTTGTTACCTTATGTTT+AGG | + | tig0042887:1017-1036 | Msa1463010:intron | 20.0% |
| !!! | AATTTGTTACCTTATGTTTA+GGG | + | tig0042887:1018-1037 | Msa1463010:intron | 20.0% |
| !! | GGAATGTAAATAATACTAAT+CGG | + | tig0042887:1144-1163 | Msa1463010:intron | 20.0% |
| !! | CAAACTCAGAATAAAAAAAA+TGG | - | tig0042887:1211-1230 | Msa1463010:intergenic | 20.0% |
| !! | TATCAATTTGTAACTTTATC+AGG | - | tig0042887:1277-1296 | Msa1463010:intergenic | 20.0% |
| !! | ATTGAAGAAAACATTGATAA+TGG | + | tig0042887:1874-1893 | Msa1463010:intron | 20.0% |
| !! | TTAAACTTCATAGAATTTAG+TGG | + | tig0042887:2284-2303 | Msa1463010:intron | 20.0% |
| !!! | ATACAGTTAGCTTTTATTAA+GGG | - | tig0042887:2316-2335 | Msa1463010:intergenic | 20.0% |
| !! | TTTATGATAATACATCTGAA+AGG | + | tig0042887:2786-2805 | Msa1463010:intron | 20.0% |
| !! | TCTAATAAACAAATCACAAA+AGG | - | tig0042887:3394-3413 | Msa1463010:intergenic | 20.0% |
| !! | TGTTTATTAGATTGTAATGT+TGG | + | tig0042887:3403-3422 | Msa1463010:intron | 20.0% |
| !! | TTAATGAGATGTTTAAACAA+CGG | - | tig0042887:4110-4129 | Msa1463010:intergenic | 20.0% |
| !! | ATTAGTAAATTATGATAGTC+AGG | - | tig0042887:4366-4385 | Msa1463010:intergenic | 20.0% |
| !! | AATTAGATTTATATTCACCT+AGG | + | tig0042887:4383-4402 | Msa1463010:intron | 20.0% |
| !! | TGATTTAAGTAAAGGTTAAT+AGG | + | tig0042887:4573-4592 | Msa1463010:intron | 20.0% |
| !! | GATTTAAGTAAAGGTTAATA+GGG | + | tig0042887:4574-4593 | Msa1463010:intron | 20.0% |
| !! | ATTAAAAAGTAACAAACAGT+TGG | - | tig0042887:6462-6481 | Msa1463010:intergenic | 20.0% |
| !! | ACCAGAATATAAATAAGTTA+TGG | - | tig0042887:6519-6538 | Msa1463010:intergenic | 20.0% |
| ! | TTCAAACACCAGTAATATTT+AGG | - | tig0042887:647-666 | Msa1463010:intergenic | 25.0% |
| ! | TGTAAAAGAACTTAGGAATA+TGG | - | tig0042887:814-833 | Msa1463010:intergenic | 25.0% |
| !! | ATTTGTTACCTTATGTTTAG+GGG | + | tig0042887:1019-1038 | Msa1463010:intron | 25.0% |
| !! | ATTTGTTCCTTTGTTTAACT+AGG | + | tig0042887:1104-1123 | Msa1463010:intron | 25.0% |
| ! | AACTTTATCAGGTTTAAGTA+AGG | - | tig0042887:1266-1285 | Msa1463010:intergenic | 25.0% |
| !!! | CATTCTTAGTTTGTATCTAT+TGG | - | tig0042887:1328-1347 | Msa1463010:intergenic | 25.0% |
| ! | ATAGATACAAACTAAGAATG+AGG | + | tig0042887:1328-1347 | Msa1463010:intron | 25.0% |
| ! | TATAGCGTAAATTTATAAGC+AGG | + | tig0042887:1420-1439 | Msa1463010:intron | 25.0% |
| ! | AACATAAGATATAAGATCCA+TGG | - | tig0042887:1646-1665 | Msa1463010:intergenic | 25.0% |
| ! | TTATACTTGCAAGTAAACAA+AGG | - | tig0042887:1677-1696 | Msa1463010:intergenic | 25.0% |
| ! | AGTAACATGATAGAAATACA+AGG | - | tig0042887:2225-2244 | Msa1463010:intergenic | 25.0% |
| !!! | GATACAGTTAGCTTTTATTA+AGG | - | tig0042887:2317-2336 | Msa1463010:intergenic | 25.0% |
| ! | TAAATTTGTACTCCAATGTT+TGG | + | tig0042887:2344-2363 | Msa1463010:intron | 25.0% |
| !!! | CAAAGTAATATTTAGTTTGG+TGG | - | tig0042887:2534-2553 | Msa1463010:intergenic | 25.0% |
| ! | ATCTGTAATTTCAATTGAGT+TGG | - | tig0042887:2609-2628 | Msa1463010:intergenic | 25.0% |
| ! | ATAATACATCTGAAAGGAAA+CGG | + | tig0042887:2792-2811 | Msa1463010:intron | 25.0% |
| !! | TCTGTAAATGGTTTGTATAA+AGG | + | tig0042887:2829-2848 | Msa1463010:intron | 25.0% |
| ! | TTTAACATGTATGATGAAAC+TGG | + | tig0042887:3164-3183 | Msa1463010:intron | 25.0% |
| ! | TTTGATAGACTTGTCTATTT+AGG | - | tig0042887:3278-3297 | Msa1463010:intergenic | 25.0% |
| ! | ACAAATTTCTTCTCATGATT+TGG | + | tig0042887:3300-3319 | Msa1463010:intron | 25.0% |
| ! | TGCTCCATCAAAATAATTAT+AGG | + | tig0042887:3445-3464 | Msa1463010:intron | 25.0% |
| ! | GCTCCATCAAAATAATTATA+GGG | + | tig0042887:3446-3465 | Msa1463010:intron | 25.0% |
| !!! | ATTAACTGGATGATTGATTT+TGG | - | tig0042887:3945-3964 | Msa1463010:intergenic | 25.0% |
| ! | CAACGGTATATCATATATAA+TGG | - | tig0042887:4093-4112 | Msa1463010:intergenic | 25.0% |
| ! | AATAAAGTGTACCATAAGAA+GGG | - | tig0042887:5314-5333 | Msa1463010:intergenic | 25.0% |
| ! | AAATAAAGTGTACCATAAGA+AGG | - | tig0042887:5315-5334 | Msa1463010:intergenic | 25.0% |
| ! | TACATATACAAGGGAAATTA+GGG | - | tig0042887:5670-5689 | Msa1463010:intergenic | 25.0% |
| ! | ATACATATACAAGGGAAATT+AGG | - | tig0042887:5671-5690 | Msa1463010:intergenic | 25.0% |
| !! | CATATTGATTAACATGTGAA+TGG | - | tig0042887:5996-6015 | Msa1463010:intergenic | 25.0% |
| ! | AACAAAAAGAATGCTTTCAT+TGG | + | tig0042887:6232-6251 | Msa1463010:intron | 25.0% |
| !!! | AGGTTTTGATCATTTTCAAA+TGG | + | tig0042887:6291-6310 | Msa1463010:intron | 25.0% |
| !!! | TTTTAACTCTTGAGTTAACA+TGG | + | tig0042887:6398-6417 | Msa1463010:intron | 25.0% |
| ! | GCCATAACTTATTTATATTC+TGG | + | tig0042887:6515-6534 | Msa1463010:intron | 25.0% |
| ! | GTACTTTACAAGAAAAGAAA+GGG | - | tig0042887:6667-6686 | Msa1463010:intergenic | 25.0% |
| TAAGCCAAACAGAAATTTGT+TGG | - | tig0042887:728-747 | Msa1463010:intergenic | 30.0% | |
| AAATAAGACCCCTAAACATA+AGG | - | tig0042887:1030-1049 | Msa1463010:intergenic | 30.0% | |
| TCTCAATCCTAGTTAAACAA+AGG | - | tig0042887:1114-1133 | Msa1463010:intergenic | 30.0% | |
| TAGGATTGAGAGTCTATTAT+TGG | + | tig0042887:1123-1142 | Msa1463010:intron | 30.0% | |
| !! | GATATTGACTTGAAACGTTA+AGG | - | tig0042887:1189-1208 | Msa1463010:intergenic | 30.0% |
| AGGAGAAAAGAATAGAAAAG+AGG | - | tig0042887:1242-1261 | Msa1463010:intergenic | 30.0% | |
| TTATCAGGTTTAAGTAAGGA+AGG | - | tig0042887:1262-1281 | Msa1463010:intergenic | 30.0% | |
| TTGTATCTATTGGCATGAAA+AGG | - | tig0042887:1318-1337 | Msa1463010:intergenic | 30.0% | |
| ATAGCAGTTAGAATCATTGA+AGG | - | tig0042887:1403-1422 | Msa1463010:intergenic | 30.0% | |
| TTGATGTAATTCCTATCGTT+TGG | + | tig0042887:1464-1483 | Msa1463010:CDS | 30.0% | |
| !! | TGTTTATTTCTACTTTGAGC+TGG | + | tig0042887:1709-1728 | Msa1463010:intron | 30.0% |
| TTATCCTGAAATGCATGTTA+TGG | + | tig0042887:1772-1791 | Msa1463010:intron | 30.0% | |
| TGTAGAACTTGAAACAAAAC+TGG | + | tig0042887:1842-1861 | Msa1463010:intron | 30.0% | |
| GTAGAACTTGAAACAAAACT+GGG | + | tig0042887:1843-1862 | Msa1463010:intron | 30.0% | |
| !! | TGGAGAATTATCGTTTTGTT+TGG | + | tig0042887:2034-2053 | Msa1463010:intron | 30.0% |
| ! | CTTGATTTTACAGTTTCCAT+TGG | + | tig0042887:2181-2200 | Msa1463010:intron | 30.0% |
| AAAGAGAATCAGTCCAATTT+GGG | + | tig0042887:2566-2585 | Msa1463010:CDS | 30.0% | |
| CTCAATTGAAATTACAGATG+AGG | + | tig0042887:2610-2629 | Msa1463010:CDS | 30.0% | |
| ! | ATGATCTCTTCAACATTTTC+TGG | - | tig0042887:2659-2678 | Msa1463010:intergenic | 30.0% |
| CAGATGTATTATCATAAACC+TGG | - | tig0042887:2784-2803 | Msa1463010:intergenic | 30.0% | |
| TAATACATCTGAAAGGAAAC+GGG | + | tig0042887:2793-2812 | Msa1463010:intron | 30.0% | |
| TGACTTGATTTCTCTGTAAA+TGG | + | tig0042887:2817-2836 | Msa1463010:intron | 30.0% | |
| GTTAAAATGTTGCATTAAGC+CGG | + | tig0042887:2961-2980 | Msa1463010:intron | 30.0% | |
| !! | TTGTAGAGCTTTGAGTTATA+TGG | + | tig0042887:3328-3347 | Msa1463010:intron | 30.0% |
| !! | TGTAGAGCTTTGAGTTATAT+GGG | + | tig0042887:3329-3348 | Msa1463010:intron | 30.0% |
| AATCACAAAAGGAATGTTTC+AGG | - | tig0042887:3383-3402 | Msa1463010:intergenic | 30.0% | |
| ! | TAGATTGTAATGTTGGTTGT+TGG | + | tig0042887:3410-3429 | Msa1463010:intron | 30.0% |
| ! | AGATTGTAATGTTGGTTGTT+GGG | + | tig0042887:3411-3430 | Msa1463010:intron | 30.0% |
| !!! | GAGCCCTATAATTATTTTGA+TGG | - | tig0042887:3452-3471 | Msa1463010:intergenic | 30.0% |
| AATACTCTAGTACTATGTCA+GGG | - | tig0042887:3506-3525 | Msa1463010:intergenic | 30.0% | |
| !! | TTAAGTAATGGACTGACAAT+GGG | - | tig0042887:3889-3908 | Msa1463010:intergenic | 30.0% |
| GGAGTCTAATTGTTAAGTAA+TGG | - | tig0042887:3901-3920 | Msa1463010:intergenic | 30.0% | |
| ! | ATGATATCTTACTTCTGGTT+GGG | - | tig0042887:3922-3941 | Msa1463010:intergenic | 30.0% |
| TTTGGATGATATCTTACTTC+TGG | - | tig0042887:3927-3946 | Msa1463010:intergenic | 30.0% | |
| ACAGTATGGAAAAACTAGTA+AGG | - | tig0042887:3990-4009 | Msa1463010:intergenic | 30.0% | |
| TACCATATAAATGTTGCCAT+TGG | + | tig0042887:4190-4209 | Msa1463010:intron | 30.0% | |
| ACCATATAAATGTTGCCATT+GGG | + | tig0042887:4191-4210 | Msa1463010:intron | 30.0% | |
| TGCAATACTTGTATAAACCT+AGG | - | tig0042887:4403-4422 | Msa1463010:intergenic | 30.0% | |
| TATGTTAACTAGTTGTCTGA+TGG | + | tig0042887:4433-4452 | Msa1463010:intron | 30.0% | |
| TTGGAAAGTTTATTCTCCTT+AGG | + | tig0042887:4627-4646 | Msa1463010:intron | 30.0% | |
| AACTAGACACAAAATCAACA+AGG | - | tig0042887:4668-4687 | Msa1463010:intergenic | 30.0% | |
| !! | TTTGGTGTTCTATTATTGTC+CGG | + | tig0042887:4733-4752 | Msa1463010:intron | 30.0% |
| ATTGATGCAACTATTTCCAT+AGG | + | tig0042887:4918-4937 | Msa1463010:intron | 30.0% | |
| GCTTATGAATTGTAGGATTT+GGG | + | tig0042887:4940-4959 | Msa1463010:intron | 30.0% | |
| CTTATGAATTGTAGGATTTG+GGG | + | tig0042887:4941-4960 | Msa1463010:intron | 30.0% | |
| CATATTATCACACAGATATG+AGG | + | tig0042887:5213-5232 | Msa1463010:CDS | 30.0% | |
| AGTTAACCATTCCATTTACA+AGG | - | tig0042887:5352-5371 | Msa1463010:intergenic | 30.0% | |
| TTGTAAATGGAATGGTTAAC+TGG | + | tig0042887:5351-5370 | Msa1463010:intron | 30.0% | |
| TTAACTGGCATGTGATAATT+AGG | + | tig0042887:5366-5385 | Msa1463010:intron | 30.0% | |
| TGGATAGAAAAATTTGTCAC+TGG | + | tig0042887:5581-5600 | Msa1463010:CDS | 30.0% | |
| GGATAGAAAAATTTGTCACT+GGG | + | tig0042887:5582-5601 | Msa1463010:CDS | 30.0% | |
| GAGAGAGAGAGATATTTAAT+TGG | - | tig0042887:5614-5633 | Msa1463010:intergenic | 30.0% | |
| GAATGGAAAAAATCCTATTG+AGG | - | tig0042887:5979-5998 | Msa1463010:intergenic | 30.0% | |
| ATTGGTCAGGATAAAAAAAC+TGG | - | tig0042887:6116-6135 | Msa1463010:intergenic | 30.0% | |
| CAAGTGAAATTATTCAAAGG+TGG | - | tig0042887:6259-6278 | Msa1463010:intergenic | 30.0% | |
| GCTCAAGTGAAATTATTCAA+AGG | - | tig0042887:6262-6281 | Msa1463010:intergenic | 30.0% | |
| AAATGATCAAAACCTTGCAA+AGG | - | tig0042887:6286-6305 | Msa1463010:intergenic | 30.0% | |
| TTGAGTTAACATGGCTAAAT+AGG | + | tig0042887:6407-6426 | Msa1463010:intron | 30.0% | |
| TGGTATTTACCAACAGTTTA+TGG | + | tig0042887:6535-6554 | Msa1463010:intron | 30.0% | |
| CAAAAATAGCCATAAACTGT+TGG | - | tig0042887:6547-6566 | Msa1463010:intergenic | 30.0% | |
| TATCACGAAAACTGAATACT+GGG | - | tig0042887:6576-6595 | Msa1463010:intergenic | 30.0% | |
| ATATCACGAAAACTGAATAC+TGG | - | tig0042887:6577-6596 | Msa1463010:intergenic | 30.0% | |
| ATATTCTTAGAGAATTGACG+TGG | + | tig0042887:6595-6614 | Msa1463010:intron | 30.0% | |
| CGTACTTTACAAGAAAAGAA+AGG | - | tig0042887:6668-6687 | Msa1463010:intergenic | 30.0% | |
| GCACATAATTTCCAGTTACT+TGG | + | tig0042887:535-554 | Msa1463010:CDS | 35.0% | |
| TTGTTAGCAACCTTATTCTC+TGG | + | tig0042887:591-610 | Msa1463010:intron | 35.0% | |
| GAAATTAAGGCCAGAGAATA+AGG | - | tig0042887:604-623 | Msa1463010:intergenic | 35.0% | |
| TTGGGTCTCCTAAATATTAC+TGG | + | tig0042887:636-655 | Msa1463010:intron | 35.0% | |
| GAAAGCTTGCATATGTTGTT+CGG | + | tig0042887:669-688 | Msa1463010:intron | 35.0% | |
| TATGTTGTTCGGACAAGTTT+AGG | + | tig0042887:680-699 | Msa1463010:intron | 35.0% | |
| CTTGCCAACAAATTTCTGTT+TGG | + | tig0042887:721-740 | Msa1463010:intron | 35.0% | |
| ACATGGCTGTAAAAGAACTT+AGG | - | tig0042887:821-840 | Msa1463010:intergenic | 35.0% | |
| ! | AGTTCTTTTACAGCCATGTT+TGG | + | tig0042887:822-841 | Msa1463010:intron | 35.0% |
| !! | TCAGTGAAATTTAGCTTGAG+AGG | + | tig0042887:916-935 | Msa1463010:intron | 35.0% |
| !! | CAGTGAAATTTAGCTTGAGA+GGG | + | tig0042887:917-936 | Msa1463010:intron | 35.0% |
| TTAACTTCATCAGATGCTTG+CGG | - | tig0042887:1543-1562 | Msa1463010:intergenic | 35.0% | |
| ATCTGATGAAGTTAACCCAA+AGG | + | tig0042887:1548-1567 | Msa1463010:CDS | 35.0% | |
| ATGAAGTTAACCCAAAGGAT+TGG | + | tig0042887:1553-1572 | Msa1463010:CDS | 35.0% | |
| TGAAGTTAACCCAAAGGATT+GGG | + | tig0042887:1554-1573 | Msa1463010:CDS | 35.0% | |
| TATACACTCATGGCGTTATA+CGG | + | tig0042887:1597-1616 | Msa1463010:CDS | 35.0% | |
| ! | TTTCTGTGATTCAAGTTCCA+TGG | + | tig0042887:1626-1645 | Msa1463010:intron | 35.0% |
| TTGAACTCAAAGATCCTGAT+AGG | + | tig0042887:1909-1928 | Msa1463010:intron | 35.0% | |
| TCCTGATAGGATACTATATC+TGG | + | tig0042887:1922-1941 | Msa1463010:intron | 35.0% | |
| CCTGATAGGATACTATATCT+GGG | + | tig0042887:1923-1942 | Msa1463010:intron | 35.0% | |
| TTCCCACGTCAAAATCAATT+GGG | - | tig0042887:1955-1974 | Msa1463010:intergenic | 35.0% | |
| ATTCCCACGTCAAAATCAAT+TGG | - | tig0042887:1956-1975 | Msa1463010:intergenic | 35.0% | |
| ! | TGACGTGGGAATATTTTGTA+AGG | + | tig0042887:1964-1983 | Msa1463010:intron | 35.0% |
| ! | TGGGAATATTTTGTAAGGAG+AGG | + | tig0042887:1969-1988 | Msa1463010:intron | 35.0% |
| ! | TCTCTTATAAAAGAGTGTGC+AGG | + | tig0042887:1996-2015 | Msa1463010:intron | 35.0% |
| ! | CTCTTATAAAAGAGTGTGCA+GGG | + | tig0042887:1997-2016 | Msa1463010:intron | 35.0% |
| !! | TTTGAGCTTTGTTCTGGATT+AGG | + | tig0042887:2061-2080 | Msa1463010:intron | 35.0% |
| !! | TCATCGGTGTTACTAAGTAA+TGG | + | tig0042887:2370-2389 | Msa1463010:intron | 35.0% |
| !! | CATCGGTGTTACTAAGTAAT+GGG | + | tig0042887:2371-2390 | Msa1463010:intron | 35.0% |
| GGTATGCATAGAATTGTCAA+GGG | - | tig0042887:2498-2517 | Msa1463010:intergenic | 35.0% | |
| AGGTATGCATAGAATTGTCA+AGG | - | tig0042887:2499-2518 | Msa1463010:intergenic | 35.0% | |
| AATTCTATGCATACCTTGCA+GGG | + | tig0042887:2503-2522 | Msa1463010:intron | 35.0% | |
| CAAAGAGAATCAGTCCAATT+TGG | + | tig0042887:2565-2584 | Msa1463010:CDS | 35.0% | |
| ATCATTGAGATGTTGCTATC+TGG | + | tig0042887:2674-2693 | Msa1463010:CDS | 35.0% | |
| AGGGATATGGTATGTCTAAA+GGG | + | tig0042887:2701-2720 | Msa1463010:intron | 35.0% | |
| AATACATCTGAAAGGAAACG+GGG | + | tig0042887:2794-2813 | Msa1463010:intron | 35.0% | |
| TTGAACAAGTGTTTAGAAGC+GGG | - | tig0042887:3118-3137 | Msa1463010:intergenic | 35.0% | |
| CTTGAACAAGTGTTTAGAAG+CGG | - | tig0042887:3119-3138 | Msa1463010:intergenic | 35.0% | |
| ATGTCAGAGCTGACTAATAT+TGG | - | tig0042887:3245-3264 | Msa1463010:intergenic | 35.0% | |
| AAGGAATGTTTCAGGATCTA+AGG | - | tig0042887:3375-3394 | Msa1463010:intergenic | 35.0% | |
| CAATACTCTAGTACTATGTC+AGG | - | tig0042887:3507-3526 | Msa1463010:intergenic | 35.0% | |
| GTGTTGTCAAATATCATCTG+CGG | + | tig0042887:3685-3704 | Msa1463010:intron | 35.0% | |
| ! | AGCAAAAAACCCACCATTTT+AGG | - | tig0042887:3783-3802 | Msa1463010:intergenic | 35.0% |
| AGCAGGAAGGAAATAAATTG+TGG | - | tig0042887:3844-3863 | Msa1463010:intergenic | 35.0% | |
| !! | TAAGTAATGGACTGACAATG+GGG | - | tig0042887:3888-3907 | Msa1463010:intergenic | 35.0% |
| !! | GTTAAGTAATGGACTGACAA+TGG | - | tig0042887:3890-3909 | Msa1463010:intergenic | 35.0% |
| GATGATATCTTACTTCTGGT+TGG | - | tig0042887:3923-3942 | Msa1463010:intergenic | 35.0% | |
| GCAAATCAAGGATGATTAAC+TGG | - | tig0042887:3959-3978 | Msa1463010:intergenic | 35.0% | |
| GGAAAAACTAGTAAGGAATG+AGG | - | tig0042887:3983-4002 | Msa1463010:intergenic | 35.0% | |
| ACCCAATGGCAACATTTATA+TGG | - | tig0042887:4195-4214 | Msa1463010:intergenic | 35.0% | |
| TACATAGTTGCATAGCAGTT+AGG | + | tig0042887:4536-4555 | Msa1463010:intron | 35.0% | |
| CAAGACAAGGTACATGTATA+TGG | + | tig0042887:4600-4619 | Msa1463010:intron | 35.0% | |
| GGTACATGTATATGGTAGTT+TGG | + | tig0042887:4608-4627 | Msa1463010:intron | 35.0% | |
| GATGCTTTATCAAACTCCTA+AGG | - | tig0042887:4646-4665 | Msa1463010:intergenic | 35.0% | |
| !!! | TCAATAATTTTTTCAGGGCG+AGG | + | tig0042887:4785-4804 | Msa1463010:intron | 35.0% |
| !!! | CAATAATTTTTTCAGGGCGA+GGG | + | tig0042887:4786-4805 | Msa1463010:intron | 35.0% |
| ACAACAACAGGAACAACTTT+GGG | - | tig0042887:4882-4901 | Msa1463010:intergenic | 35.0% | |
| TCCATAGGCTTATGAATTGT+AGG | + | tig0042887:4933-4952 | Msa1463010:intron | 35.0% | |
| TCCTACAATTCATAAGCCTA+TGG | - | tig0042887:4937-4956 | Msa1463010:intergenic | 35.0% | |
| GGCTTATGAATTGTAGGATT+TGG | + | tig0042887:4939-4958 | Msa1463010:intron | 35.0% | |
| ! | ATTTGGGGCTTCAAACTATT+TGG | + | tig0042887:4956-4975 | Msa1463010:intron | 35.0% |
| AGATAAATGTGACATGACAG+TGG | + | tig0042887:5072-5091 | Msa1463010:intron | 35.0% | |
| GATAAATGTGACATGACAGT+GGG | + | tig0042887:5073-5092 | Msa1463010:intron | 35.0% | |
| TAAAAGATATACGGACCTCA+CGG | - | tig0042887:5289-5308 | Msa1463010:intergenic | 35.0% | |
| ! | AGAAGGGCGTAAAAGATATA+CGG | - | tig0042887:5298-5317 | Msa1463010:intergenic | 35.0% |
| ! | TATCTTTTACGCCCTTCTTA+TGG | + | tig0042887:5300-5319 | Msa1463010:intron | 35.0% |
| ! | GACAAATTTTTCTATCCAGC+AGG | - | tig0042887:5579-5598 | Msa1463010:intergenic | 35.0% |
| CAATAAGGTAGCAGTAGAAT+TGG | - | tig0042887:5646-5665 | Msa1463010:intergenic | 35.0% | |
| AAGGGAAATTAGGGTCAATA+AGG | - | tig0042887:5661-5680 | Msa1463010:intergenic | 35.0% | |
| GGATTACTGAAATACCCTTT+GGG | - | tig0042887:5799-5818 | Msa1463010:intergenic | 35.0% | |
| ! | GAGAATTTTTCCTACAAGGA+CGG | - | tig0042887:5861-5880 | Msa1463010:intergenic | 35.0% |
| GGTAAGTAAAGCTTCAAGAA+GGG | - | tig0042887:6145-6164 | Msa1463010:intergenic | 35.0% | |
| AGGTAAGTAAAGCTTCAAGA+AGG | - | tig0042887:6146-6165 | Msa1463010:intergenic | 35.0% | |
| TCAAAACTTTCCTGACAATG+TGG | + | tig0042887:6326-6345 | Msa1463010:intron | 35.0% | |
| AACAGATGAGGTTCATTTAG+CGG | + | tig0042887:6368-6387 | Msa1463010:intron | 35.0% | |
| GTTAACATGGCTAAATAGGA+TGG | + | tig0042887:6411-6430 | Msa1463010:intron | 35.0% | |
| ! | AAGTCAGATGAAAGAGTACA+AGG | - | tig0042887:6732-6751 | Msa1463010:intergenic | 35.0% |
| !! | GTTTAGGGGTCTTATTTGTC+AGG | + | tig0042887:1033-1052 | Msa1463010:intron | 40.0% |
| GCGTAAATTTATAAGCAGGC+AGG | + | tig0042887:1424-1443 | Msa1463010:intron | 40.0% | |
| ATGAGTGTATACGATGAGGA+AGG | - | tig0042887:1588-1607 | Msa1463010:intergenic | 40.0% | |
| TTCCTCATCGTATACACTCA+TGG | + | tig0042887:1587-1606 | Msa1463010:CDS | 40.0% | |
| TGAGCTGGCATTTAAATCTC+AGG | + | tig0042887:1724-1743 | Msa1463010:intron | 40.0% | |
| GTTGCCATAACATGCATTTC+AGG | - | tig0042887:1779-1798 | Msa1463010:intergenic | 40.0% | |
| TTGCAAGTCAAGACAAGACT+TGG | + | tig0042887:1819-1838 | Msa1463010:intron | 40.0% | |
| GAACTTGAAACAAAACTGGG+TGG | + | tig0042887:1846-1865 | Msa1463010:intron | 40.0% | |
| CCCAGATATAGTATCCTATC+AGG | - | tig0042887:1926-1945 | Msa1463010:intergenic | 40.0% | |
| !! | TAGCCCAATTGATTTTGACG+TGG | + | tig0042887:1949-1968 | Msa1463010:intron | 40.0% |
| !! | AGCCCAATTGATTTTGACGT+GGG | + | tig0042887:1950-1969 | Msa1463010:intron | 40.0% |
| ACAGTTTCCATTGGATCTCT+TGG | + | tig0042887:2190-2209 | Msa1463010:intron | 40.0% | |
| CAGTTTCCATTGGATCTCTT+GGG | + | tig0042887:2191-2210 | Msa1463010:intron | 40.0% | |
| AAATTGCCCAAGAGATCCAA+TGG | - | tig0042887:2200-2219 | Msa1463010:intergenic | 40.0% | |
| ! | CAGTTCAACTAAGTTGACTC+TGG | - | tig0042887:2254-2273 | Msa1463010:intergenic | 40.0% |
| !! | CTCCAATGTTTGGTTCTCAT+CGG | + | tig0042887:2354-2373 | Msa1463010:intron | 40.0% |
| GAATTGTCAAGGGAAGGAAA+TGG | - | tig0042887:2488-2507 | Msa1463010:intergenic | 40.0% | |
| TGCATAGAATTGTCAAGGGA+AGG | - | tig0042887:2494-2513 | Msa1463010:intergenic | 40.0% | |
| CAATTCTATGCATACCTTGC+AGG | + | tig0042887:2502-2521 | Msa1463010:intron | 40.0% | |
| ! | ATTGGACTGATTCTCTTTGC+TGG | - | tig0042887:2564-2583 | Msa1463010:intergenic | 40.0% |
| ! | ATTGTTGTTCGCACCCAAAT+TGG | - | tig0042887:2582-2601 | Msa1463010:intergenic | 40.0% |
| ! | AGATGTTGCTATCTGGTTTG+AGG | + | tig0042887:2681-2700 | Msa1463010:CDS | 40.0% |
| ! | GATGTTGCTATCTGGTTTGA+GGG | + | tig0042887:2682-2701 | Msa1463010:CDS | 40.0% |
| GAGGGATATGGTATGTCTAA+AGG | + | tig0042887:2700-2719 | Msa1463010:intron | 40.0% | |
| ! | CTCACAACTTAGTACTGAGA+TGG | - | tig0042887:2754-2773 | Msa1463010:intergenic | 40.0% |
| TAAGTTGTGAGTCTAAGTCC+AGG | + | tig0042887:2763-2782 | Msa1463010:intron | 40.0% | |
| ATGAGCATAGTCAACGTCAA+CGG | - | tig0042887:2887-2906 | Msa1463010:intergenic | 40.0% | |
| CAATCATCACCTCACAAAAC+CGG | - | tig0042887:2983-3002 | Msa1463010:intergenic | 40.0% | |
| TGAACAAGTGTTTGTACGTG+GGG | - | tig0042887:3007-3026 | Msa1463010:intergenic | 40.0% | |
| CTGAACAAGTGTTTGTACGT+GGG | - | tig0042887:3008-3027 | Msa1463010:intergenic | 40.0% | |
| TCTGAACAAGTGTTTGTACG+TGG | - | tig0042887:3009-3028 | Msa1463010:intergenic | 40.0% | |
| TGAACAAGTGTTTAGAAGCG+GGG | - | tig0042887:3117-3136 | Msa1463010:intergenic | 40.0% | |
| CATGTTAAAGAGTCCCACAT+TGG | - | tig0042887:3153-3172 | Msa1463010:intergenic | 40.0% | |
| ! | TTAGTCAGCTCTGACATGTT+TGG | + | tig0042887:3248-3267 | Msa1463010:intron | 40.0% |
| ! | TAGTCAGCTCTGACATGTTT+GGG | + | tig0042887:3249-3268 | Msa1463010:intron | 40.0% |
| TTGTCAAATATCATCTGCGG+CGG | + | tig0042887:3688-3707 | Msa1463010:intron | 40.0% | |
| !! | CACAACCGATTTGTAAAGGA+CGG | + | tig0042887:3734-3753 | Msa1463010:intron | 40.0% |
| ATACGAAGGCCTAAAATGGT+GGG | + | tig0042887:3771-3790 | Msa1463010:intron | 40.0% | |
| ! | CAACTCAGTGTTATCGATTG+CGG | - | tig0042887:3815-3834 | Msa1463010:intergenic | 40.0% |
| !! | AAGTAATGGACTGACAATGG+GGG | - | tig0042887:3887-3906 | Msa1463010:intergenic | 40.0% |
| AAGGAATGAGGTGCAAATCA+AGG | - | tig0042887:3971-3990 | Msa1463010:intergenic | 40.0% | |
| AACAGTGTTCTACAACCCAA+TGG | - | tig0042887:4209-4228 | Msa1463010:intergenic | 40.0% | |
| GGATAAAACCTCCTCAGAAA+GGG | - | tig0042887:4287-4306 | Msa1463010:intergenic | 40.0% | |
| AGGATAAAACCTCCTCAGAA+AGG | - | tig0042887:4288-4307 | Msa1463010:intergenic | 40.0% | |
| !! | GGAGGTTTTATCCTCTGTTT+TGG | + | tig0042887:4294-4313 | Msa1463010:CDS | 40.0% |
| TGAAAACAGCTCCAAAACAG+AGG | - | tig0042887:4308-4327 | Msa1463010:intergenic | 40.0% | |
| AGACCAATAACCCACCTATT+GGG | + | tig0042887:4464-4483 | Msa1463010:intron | 40.0% | |
| TGCCTACATAGATTCCACAT+GGG | - | tig0042887:4498-4517 | Msa1463010:intergenic | 40.0% | |
| AATCTATGTAGGCAGTTGTG+TGG | + | tig0042887:4504-4523 | Msa1463010:intron | 40.0% | |
| GTTAATAGGGAGACAAGACA+AGG | + | tig0042887:4587-4606 | Msa1463010:intron | 40.0% | |
| CACAACAACAGGAACAACTT+TGG | - | tig0042887:4883-4902 | Msa1463010:intergenic | 40.0% | |
| AGTTGTTCCTGTTGTTGTGA+AGG | + | tig0042887:4884-4903 | Msa1463010:CDS | 40.0% | |
| AATACCACCTTCACAACAAC+AGG | - | tig0042887:4894-4913 | Msa1463010:intergenic | 40.0% | |
| TGAAACCTATACCTGAATCC+AGG | + | tig0042887:5027-5046 | Msa1463010:intron | 40.0% | |
| GAAACCTATACCTGAATCCA+GGG | + | tig0042887:5028-5047 | Msa1463010:intron | 40.0% | |
| AAACCTATACCTGAATCCAG+GGG | + | tig0042887:5029-5048 | Msa1463010:intron | 40.0% | |
| AACGTCTCTCTCCTTGTAAA+TGG | + | tig0042887:5338-5357 | Msa1463010:intron | 40.0% | |
| CTCTCTCCTTGTAAATGGAA+TGG | + | tig0042887:5343-5362 | Msa1463010:intron | 40.0% | |
| TTCACAATGTCAATGCCATG+CGG | - | tig0042887:5454-5473 | Msa1463010:intergenic | 40.0% | |
| ATATCCTTCGTATTGAGCGA+CGG | - | tig0042887:5536-5555 | Msa1463010:intergenic | 40.0% | |
| CGGATTACTGAAATACCCTT+TGG | - | tig0042887:5800-5819 | Msa1463010:intergenic | 40.0% | |
| GTATTTCAGTAATCCGCTTG+AGG | + | tig0042887:5804-5823 | Msa1463010:intron | 40.0% | |
| AAGGGTTCTTCGTATGGAAA+GGG | + | tig0042887:5827-5846 | Msa1463010:intron | 40.0% | |
| ! | GACGGAGAATTTTTCCTACA+AGG | - | tig0042887:5865-5884 | Msa1463010:intergenic | 40.0% |
| TTTGACTATTCGAGGCTCTA+TGG | - | tig0042887:5887-5906 | Msa1463010:intergenic | 40.0% | |
| TAGAGCCTCGAATAGTCAAA+TGG | + | tig0042887:5887-5906 | Msa1463010:intron | 40.0% | |
| AGAGCCTCGAATAGTCAAAT+GGG | + | tig0042887:5888-5907 | Msa1463010:intron | 40.0% | |
| AGATCCTTGCTTACAGGTAT+TGG | + | tig0042887:5923-5942 | Msa1463010:intron | 40.0% | |
| CCTCTACCATGTTTCTTCTA+GGG | - | tig0042887:5952-5971 | Msa1463010:intergenic | 40.0% | |
| ACCTCTACCATGTTTCTTCT+AGG | - | tig0042887:5953-5972 | Msa1463010:intergenic | 40.0% | |
| !! | TGGTAGAGGTATTCCTCAAT+AGG | + | tig0042887:5963-5982 | Msa1463010:intron | 40.0% |
| ACGTACGAATACGATTACCA+AGG | + | tig0042887:6020-6039 | Msa1463010:intron | 40.0% | |
| ! | CGGATATGTGTGATTTTCCT+TGG | - | tig0042887:6040-6059 | Msa1463010:intergenic | 40.0% |
| GTGAACTCAAAGGAGAAACT+CGG | - | tig0042887:6060-6079 | Msa1463010:intergenic | 40.0% | |
| TAGCGATTGTGTGAACTCAA+AGG | - | tig0042887:6070-6089 | Msa1463010:intergenic | 40.0% | |
| CTTCAAGAAGGGTCTCAAAT+TGG | - | tig0042887:6134-6153 | Msa1463010:intergenic | 40.0% | |
| !! | CTTTTCAAGACACGACTCAT+GGG | - | tig0042887:6212-6231 | Msa1463010:intergenic | 40.0% |
| !! | TCTTTTCAAGACACGACTCA+TGG | - | tig0042887:6213-6232 | Msa1463010:intergenic | 40.0% |
| ACGAAAACTGAATACTGGGA+AGG | - | tig0042887:6572-6591 | Msa1463010:intergenic | 40.0% | |
| !! | GTATTTTGCGAGTGCTGTAA+TGG | + | tig0042887:6695-6714 | Msa1463010:CDS | 40.0% |
| CTTCAATGGCTCCAAGTAAC+TGG | - | tig0042887:549-568 | Msa1463010:intergenic | 45.0% | |
| AATAGCAGCCAGTGCTTCAA+TGG | - | tig0042887:563-582 | Msa1463010:intergenic | 45.0% | |
| !!! | AGCACTGGCTGCTATTTTCA+AGG | + | tig0042887:567-586 | Msa1463010:CDS | 45.0% |
| GCAAGCAATCAAGCATGACA+TGG | - | tig0042887:706-725 | Msa1463010:intergenic | 45.0% | |
| TTTACAGCCATGTTTGGCAG+AGG | + | tig0042887:828-847 | Msa1463010:intron | 45.0% | |
| AAAGCAACCTCTGCCAAACA+TGG | - | tig0042887:838-857 | Msa1463010:intergenic | 45.0% | |
| TTTATAAGCAGGCAGGCAGT+CGG | + | tig0042887:1431-1450 | Msa1463010:intron | 45.0% | |
| !! | GAAGTGTCGTTCCAAACGAT+AGG | - | tig0042887:1478-1497 | Msa1463010:intergenic | 45.0% |
| ATCAGATGCTTGCGGAGTAA+TGG | - | tig0042887:1535-1554 | Msa1463010:intergenic | 45.0% | |
| GCAAGTAAGCCCAATCCTTT+GGG | - | tig0042887:1566-1585 | Msa1463010:intergenic | 45.0% | |
| !! | GCAGGGTATTGTGTAACTCA+TGG | + | tig0042887:2014-2033 | Msa1463010:intron | 45.0% |
| !! | GGAGAGTTTGAGCTTTGTTC+TGG | + | tig0042887:2055-2074 | Msa1463010:intron | 45.0% |
| GGATTAGGAGTCTTTGACTC+TGG | + | tig0042887:2076-2095 | Msa1463010:intron | 45.0% | |
| TGAGCTCAAGAGCTCTACAA+TGG | - | tig0042887:2128-2147 | Msa1463010:intergenic | 45.0% | |
| CACCGATGAGAACCAAACAT+TGG | - | tig0042887:2359-2378 | Msa1463010:intergenic | 45.0% | |
| TTGTCAAGGGAAGGAAATGG+TGG | - | tig0042887:2485-2504 | Msa1463010:intergenic | 45.0% | |
| TACAGATGAGGCAGAAGATG+AGG | + | tig0042887:2622-2641 | Msa1463010:CDS | 45.0% | |
| TGAGGCAGAAGATGAGGATA+TGG | + | tig0042887:2628-2647 | Msa1463010:CDS | 45.0% | |
| ! | GCTATCTGGTTTGAGGGATA+TGG | + | tig0042887:2688-2707 | Msa1463010:CDS | 45.0% |
| !! | TGCATTAAGCCGGTTTTGTG+AGG | + | tig0042887:2971-2990 | Msa1463010:intron | 45.0% |
| GAACAAGTGTTTGTACGTGG+GGG | - | tig0042887:3006-3025 | Msa1463010:intergenic | 45.0% | |
| AGACCATCTCACAACCAATG+TGG | + | tig0042887:3026-3045 | Msa1463010:intron | 45.0% | |
| GACCATCTCACAACCAATGT+GGG | + | tig0042887:3027-3046 | Msa1463010:intron | 45.0% | |
| GGTGTTAAAGAGTCCCACAT+TGG | - | tig0042887:3043-3062 | Msa1463010:intergenic | 45.0% | |
| CTAACTCAACCCCACAAAAC+CGG | + | tig0042887:3072-3091 | Msa1463010:intron | 45.0% | |
| GAACAAGTGTTTAGAAGCGG+GGG | - | tig0042887:3116-3135 | Msa1463010:intergenic | 45.0% | |
| AAGCCATCTCACAACCAATG+TGG | + | tig0042887:3136-3155 | Msa1463010:intron | 45.0% | |
| AGCCATCTCACAACCAATGT+GGG | + | tig0042887:3137-3156 | Msa1463010:intron | 45.0% | |
| ATGAAACTGGTCCGACTAAC+AGG | + | tig0042887:3177-3196 | Msa1463010:intron | 45.0% | |
| GCTTAAGCAAGCCTGTTAGT+CGG | - | tig0042887:3191-3210 | Msa1463010:intergenic | 45.0% | |
| ACTATCGCATGTGAGAGGAT+CGG | - | tig0042887:3650-3669 | Msa1463010:intergenic | 45.0% | |
| ACAGTACTATCGCATGTGAG+AGG | - | tig0042887:3655-3674 | Msa1463010:intergenic | 45.0% | |
| AAATCGGTTGTGGTGGTTCA+TGG | - | tig0042887:3726-3745 | Msa1463010:intergenic | 45.0% | |
| CCTTTACAAATCGGTTGTGG+TGG | - | tig0042887:3733-3752 | Msa1463010:intergenic | 45.0% | |
| !! | CCACCACAACCGATTTGTAA+AGG | + | tig0042887:3730-3749 | Msa1463010:intron | 45.0% |
| CGTCCTTTACAAATCGGTTG+TGG | - | tig0042887:3736-3755 | Msa1463010:intergenic | 45.0% | |
| !! | AACCGATTTGTAAAGGACGG+CGG | + | tig0042887:3737-3756 | Msa1463010:intron | 45.0% |
| GCTGATACGAAGGCCTAAAA+TGG | + | tig0042887:3767-3786 | Msa1463010:intron | 45.0% | |
| GATACGAAGGCCTAAAATGG+TGG | + | tig0042887:3770-3789 | Msa1463010:intron | 45.0% | |
| ! | TCAGTGTTATCGATTGCGGA+TGG | - | tig0042887:3811-3830 | Msa1463010:intergenic | 45.0% |
| AAATTTCCTACAAGCCCTCC+AGG | - | tig0042887:4032-4051 | Msa1463010:intergenic | 45.0% | |
| TGTAGAACACTGTTGTCCGT+TGG | + | tig0042887:4215-4234 | Msa1463010:intron | 45.0% | |
| TTTGACGTCTTCCCTTTCTG+AGG | + | tig0042887:4273-4292 | Msa1463010:CDS | 45.0% | |
| !!! | GTTTTGGAGCTGTTTTCACC+TGG | + | tig0042887:4310-4329 | Msa1463010:CDS | 45.0% |
| !! | CAGAAGTATCATACCTCACC+AGG | - | tig0042887:4331-4350 | Msa1463010:intergenic | 45.0% |
| GAGACCAATAACCCACCTAT+TGG | + | tig0042887:4463-4482 | Msa1463010:intron | 45.0% | |
| TGCCCATGTGGAATCTATGT+AGG | + | tig0042887:4493-4512 | Msa1463010:intron | 45.0% | |
| CTGCCTACATAGATTCCACA+TGG | - | tig0042887:4499-4518 | Msa1463010:intergenic | 45.0% | |
| TAACACAAGAAGTCTGGCAC+CGG | - | tig0042887:4755-4774 | Msa1463010:intergenic | 45.0% | |
| GAGCTGTAACACAAGAAGTC+TGG | - | tig0042887:4761-4780 | Msa1463010:intergenic | 45.0% | |
| TTGGCTGAACTTTCTCGTAG+AGG | + | tig0042887:4834-4853 | Msa1463010:CDS | 45.0% | |
| ! | ACAACTTTGGGAAGACTAGC+AGG | - | tig0042887:4870-4889 | Msa1463010:intergenic | 45.0% |
| TGTTCCTGTTGTTGTGAAGG+TGG | + | tig0042887:4887-4906 | Msa1463010:CDS | 45.0% | |
| CTGCATTACGATGTTCGAAG+AGG | + | tig0042887:5125-5144 | Msa1463010:CDS | 45.0% | |
| ACATTAGACCCGACACTATG+CGG | - | tig0042887:5152-5171 | Msa1463010:intergenic | 45.0% | |
| ATGCTGCTGCATATGTATGC+TGG | + | tig0042887:5177-5196 | Msa1463010:CDS | 45.0% | |
| TGCTGCTGCATATGTATGCT+GGG | + | tig0042887:5178-5197 | Msa1463010:CDS | 45.0% | |
| GCATATGTATGCTGGGCATT+TGG | + | tig0042887:5185-5204 | Msa1463010:CDS | 45.0% | |
| CTTTCCAGGAGAATGTTGGA+CGG | + | tig0042887:5416-5435 | Msa1463010:CDS | 45.0% | |
| AGGTAGCAGTAGAATTGGCA+GGG | - | tig0042887:5641-5660 | Msa1463010:intergenic | 45.0% | |
| AAGGTAGCAGTAGAATTGGC+AGG | - | tig0042887:5642-5661 | Msa1463010:intergenic | 45.0% | |
| GCGTGTGTGAGTGAGTATTA+TGG | - | tig0042887:5775-5794 | Msa1463010:intergenic | 45.0% | |
| TTCAGTAATCCGCTTGAGGA+AGG | + | tig0042887:5808-5827 | Msa1463010:intron | 45.0% | |
| TCAGTAATCCGCTTGAGGAA+GGG | + | tig0042887:5809-5828 | Msa1463010:intron | 45.0% | |
| TTGAGGAAGGGTTCTTCGTA+TGG | + | tig0042887:5821-5840 | Msa1463010:intron | 45.0% | |
| GAAGGGTTCTTCGTATGGAA+AGG | + | tig0042887:5826-5845 | Msa1463010:intron | 45.0% | |
| ACTATTCGAGGCTCTATGGA+CGG | - | tig0042887:5883-5902 | Msa1463010:intergenic | 45.0% | |
| GAGCCTCGAATAGTCAAATG+GGG | + | tig0042887:5889-5908 | Msa1463010:intron | 45.0% | |
| GAAGCCAATACCTGTAAGCA+AGG | - | tig0042887:5930-5949 | Msa1463010:intergenic | 45.0% | |
| TGGCTTCCCTAGAAGAAACA+TGG | + | tig0042887:5943-5962 | Msa1463010:intron | 45.0% | |
| CCCTAGAAGAAACATGGTAG+AGG | + | tig0042887:5949-5968 | Msa1463010:intron | 45.0% | |
| ACCACCAATAGAGAAAAGCG+GGG | - | tig0042887:6093-6112 | Msa1463010:intergenic | 45.0% | |
| GACCACCAATAGAGAAAAGC+GGG | - | tig0042887:6094-6113 | Msa1463010:intergenic | 45.0% | |
| GGACCACCAATAGAGAAAAG+CGG | - | tig0042887:6095-6114 | Msa1463010:intergenic | 45.0% | |
| AGAAGGGTCTCAAATTGGTC+AGG | - | tig0042887:6129-6148 | Msa1463010:intergenic | 45.0% | |
| TTCACTTGAGCTCCTTTGCA+AGG | + | tig0042887:6271-6290 | Msa1463010:intron | 45.0% | |
| CAGTTCACTGGTAACAGATG+AGG | + | tig0042887:6356-6375 | Msa1463010:intron | 45.0% | |
| AGATGAGGTTCATTTAGCGG+TGG | + | tig0042887:6371-6390 | Msa1463010:intron | 45.0% | |
| GACGTGGAAATTACGTCTTC+AGG | + | tig0042887:6611-6630 | Msa1463010:intron | 45.0% | |
| ACAGCACTCGCAAAATACTG+AGG | - | tig0042887:6693-6712 | Msa1463010:intergenic | 45.0% | |
| !!! | ATAAACATATTTTTTTTATT+AGG | + | tig0042887:5100-5119 | Msa1463010:intron | 5.0% |
| ! | CTTTGTCGATTGGACACACG+AGG | + | tig0042887:489-508 | Msa1463010:five_prime_UTR | 50.0% |
| ACTTGGAGCCATTGAAGCAC+TGG | + | tig0042887:552-571 | Msa1463010:CDS | 50.0% | |
| GGCAAGTAAGCCCAATCCTT+TGG | - | tig0042887:1567-1586 | Msa1463010:intergenic | 50.0% | |
| CGCCATGAGTGTATACGATG+AGG | - | tig0042887:1592-1611 | Msa1463010:intergenic | 50.0% | |
| ! | TTTGGTGGTTCTTCCCTGCA+AGG | - | tig0042887:2519-2538 | Msa1463010:intergenic | 50.0% |
| ! | GTCCCACATTGGTTGTGAGA+TGG | - | tig0042887:3032-3051 | Msa1463010:intergenic | 50.0% |
| GGACTCTTTAACACCCCCTT+GGG | + | tig0042887:3048-3067 | Msa1463010:intron | 50.0% | |
| !! | CGGTTTTGTGGGGTTGAGTT+AGG | - | tig0042887:3074-3093 | Msa1463010:intergenic | 50.0% |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | - | tig0042887:3085-3104 | Msa1463010:intergenic | 50.0% |
| ! | GTCCCACATTGGTTGTGAGA+TGG | - | tig0042887:3032-3051 | Msa1463010:intergenic | 50.0% |
| ! | CATGTGAGAGGATCGGGTTT+TGG | - | tig0042887:3643-3662 | Msa1463010:intergenic | 50.0% |
| CTATCGCATGTGAGAGGATC+GGG | - | tig0042887:3649-3668 | Msa1463010:intergenic | 50.0% | |
| CACCGCCGTCCTTTACAAAT+CGG | - | tig0042887:3742-3761 | Msa1463010:intergenic | 50.0% | |
| TTAGGCCTTCGTATCAGCCA+TGG | - | tig0042887:3765-3784 | Msa1463010:intergenic | 50.0% | |
| ! | GTGTTATCGATTGCGGATGG+CGG | - | tig0042887:3808-3827 | Msa1463010:intergenic | 50.0% |
| ! | TGGACTGACAATGGGGGTAT+GGG | - | tig0042887:3881-3900 | Msa1463010:intergenic | 50.0% |
| ! | ATGGACTGACAATGGGGGTA+TGG | - | tig0042887:3882-3901 | Msa1463010:intergenic | 50.0% |
| AGGCGGTCTACACTACAGTA+TGG | - | tig0042887:4004-4023 | Msa1463010:intergenic | 50.0% | |
| TACCTTTCGCTGCAGACCAA+CGG | - | tig0042887:4234-4253 | Msa1463010:intergenic | 50.0% | |
| ! | TGGTCTGCAGCGAAAGGTAT+TGG | + | tig0042887:4235-4254 | Msa1463010:CDS | 50.0% |
| !!! | TTTTTCAGGGCGAGGGTTCA+TGG | + | tig0042887:4793-4812 | Msa1463010:intron | 50.0% |
| ATTGATGTCAACAACGCCCC+TGG | - | tig0042887:5048-5067 | Msa1463010:intergenic | 50.0% | |
| CATGCCACTGTTAAGAGGTG+CGG | - | tig0042887:5260-5279 | Msa1463010:intergenic | 50.0% | |
| CGTAGCATGCCACTGTTAAG+AGG | - | tig0042887:5265-5284 | Msa1463010:intergenic | 50.0% | |
| GCAGCTTTCCAGGAGAATGT+TGG | + | tig0042887:5412-5431 | Msa1463010:CDS | 50.0% | |
| TTCGTATTGAGCGACGGAGA+TGG | - | tig0042887:5530-5549 | Msa1463010:intergenic | 50.0% | |
| ATCTCCGTCGCTCAATACGA+AGG | + | tig0042887:5529-5548 | Msa1463010:CDS | 50.0% | |
| TCCATTTGTGAGTGACCTGC+TGG | + | tig0042887:5561-5580 | Msa1463010:CDS | 50.0% | |
| TCCAGCAGGTCACTCACAAA+TGG | - | tig0042887:5565-5584 | Msa1463010:intergenic | 50.0% | |
| GGTAGCAGTAGAATTGGCAG+GGG | - | tig0042887:5640-5659 | Msa1463010:intergenic | 50.0% | |
| ACGAAGAACCCTTCCTCAAG+CGG | - | tig0042887:5820-5839 | Msa1463010:intergenic | 50.0% | |
| GGTATGATCTCCGTCCTTGT+AGG | + | tig0042887:5848-5867 | Msa1463010:intron | 50.0% | |
| CTGCCCCATTTGACTATTCG+AGG | - | tig0042887:5895-5914 | Msa1463010:intergenic | 50.0% | |
| CTGTAAGCAAGGATCTCCAC+GGG | - | tig0042887:5919-5938 | Msa1463010:intergenic | 50.0% | |
| CCTGTAAGCAAGGATCTCCA+CGG | - | tig0042887:5920-5939 | Msa1463010:intergenic | 50.0% | |
| !! | GCTACCCCGCTTTTCTCTAT+TGG | + | tig0042887:6086-6105 | Msa1463010:intron | 50.0% |
| !! | ACCCCGCTTTTCTCTATTGG+TGG | + | tig0042887:6089-6108 | Msa1463010:intron | 50.0% |
| TGAGGTTCATTTAGCGGTGG+AGG | + | tig0042887:6374-6393 | Msa1463010:intron | 50.0% | |
| !! | CATGAGAGAACTTGCTGCAG+AGG | + | tig0042887:6641-6660 | Msa1463010:CDS | 50.0% |
| AGGGTGCAACATTGGCAACT+GGG | + | tig0042887:6763-6782 | Msa1463010:CDS | 50.0% | |
| ! | TAATGGACGTCGAGCTGCGA+TGG | - | tig0042887:1518-1537 | Msa1463010:intergenic | 55.0% |
| GGGACTCTTTAACACCCCCT+TGG | + | tig0042887:3047-3066 | Msa1463010:intron | 55.0% | |
| TGGGGTTGAGTTAGGCCCAA+GGG | - | tig0042887:3066-3085 | Msa1463010:intergenic | 55.0% | |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | tig0042887:3084-3103 | Msa1463010:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | - | tig0042887:3086-3105 | Msa1463010:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | tig0042887:3086-3105 | Msa1463010:intron | 55.0% |
| GCAATCCTCACCTCACAAGC+CGG | - | tig0042887:3094-3113 | Msa1463010:intergenic | 55.0% | |
| CCACTGTCTGTCAAGCAGGA+AGG | - | tig0042887:3857-3876 | Msa1463010:intergenic | 55.0% | |
| CCTTCCTGCTTGACAGACAG+TGG | + | tig0042887:3854-3873 | Msa1463010:intron | 55.0% | |
| TACAAGCCCTCCAGGCAATC+AGG | - | tig0042887:4024-4043 | Msa1463010:intergenic | 55.0% | |
| TGATTGCCTGGAGGGCTTGT+AGG | + | tig0042887:4023-4042 | Msa1463010:intron | 55.0% | |
| GTGTCTGTCATCAGCGCATC+TGG | - | tig0042887:4069-4088 | Msa1463010:intergenic | 55.0% | |
| ! | GACGTCTTCCCTTTCTGAGG+AGG | + | tig0042887:4276-4295 | Msa1463010:CDS | 55.0% |
| !! | GGAGCTGTTTTCACCTGGTG+AGG | + | tig0042887:4315-4334 | Msa1463010:CDS | 55.0% |
| ACGCCCCTGGATTCAGGTAT+AGG | - | tig0042887:5035-5054 | Msa1463010:intergenic | 55.0% | |
| TCAACAACGCCCCTGGATTC+AGG | - | tig0042887:5041-5060 | Msa1463010:intergenic | 55.0% | |
| CGAAGAGGTCCGCATAGTGT+CGG | + | tig0042887:5140-5159 | Msa1463010:CDS | 55.0% | |
| GAAGAGGTCCGCATAGTGTC+GGG | + | tig0042887:5141-5160 | Msa1463010:CDS | 55.0% | |
| TGCTCCGCACCTCTTAACAG+TGG | + | tig0042887:5253-5272 | Msa1463010:CDS | 55.0% | |
| CAGGAGAATGTTGGACGGCA+GGG | + | tig0042887:5421-5440 | Msa1463010:CDS | 55.0% | |
| CGGCAGGGAAATTATCCGCA+TGG | + | tig0042887:5436-5455 | Msa1463010:CDS | 55.0% | |
| TCACTCACACACGCACCCAA+AGG | + | tig0042887:5781-5800 | Msa1463010:intron | 55.0% | |
| CACTCACACACGCACCCAAA+GGG | + | tig0042887:5782-5801 | Msa1463010:intron | 55.0% | |
| CCGTGGAGATCCTTGCTTAC+AGG | + | tig0042887:5917-5936 | Msa1463010:intron | 55.0% | |
| CCTACAGAGTCACACACTGC+AGG | - | tig0042887:6166-6185 | Msa1463010:intergenic | 55.0% | |
| CCTGCAGTGTGTGACTCTGT+AGG | + | tig0042887:6163-6182 | Msa1463010:intron | 55.0% | |
| CTGCTGTGAGCCACATTGTC+AGG | - | tig0042887:6339-6358 | Msa1463010:intergenic | 55.0% | |
| TGTGGCTCACAGCAGTTCAC+TGG | + | tig0042887:6344-6363 | Msa1463010:intron | 55.0% | |
| ! | ATCTGACTTGTGCATGCGCC+AGG | + | tig0042887:6743-6762 | Msa1463010:CDS | 55.0% |
| ! | TCTGACTTGTGCATGCGCCA+GGG | + | tig0042887:6744-6763 | Msa1463010:CDS | 55.0% |
| CAGTTGCCAATGTTGCACCC+TGG | - | tig0042887:6764-6783 | Msa1463010:intergenic | 55.0% | |
| CAGGGTGCAACATTGGCAAC+TGG | + | tig0042887:6762-6781 | Msa1463010:CDS | 55.0% | |
| GGGTGCAACATTGGCAACTG+GGG | + | tig0042887:6764-6783 | Msa1463010:CDS | 55.0% | |
| GGGTTGAGTTAGGCCCAAGG+GGG | - | tig0042887:3064-3083 | Msa1463010:intergenic | 60.0% | |
| GGGGTTGAGTTAGGCCCAAG+GGG | - | tig0042887:3065-3084 | Msa1463010:intergenic | 60.0% | |
| GTGGGGTTGAGTTAGGCCCA+AGG | - | tig0042887:3067-3086 | Msa1463010:intergenic | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | tig0042887:3081-3100 | Msa1463010:intron | 60.0% |
| ! | TGTAAAGGACGGCGGTGCCA+TGG | + | tig0042887:3745-3764 | Msa1463010:intron | 60.0% |
| !! | CGGTGCCATGGCTGATACGA+AGG | + | tig0042887:3757-3776 | Msa1463010:intron | 60.0% |
| GGGACCACTGTCTGTCAAGC+AGG | - | tig0042887:3861-3880 | Msa1463010:intergenic | 60.0% | |
| GTGTAGACCGCCTGATTGCC+TGG | + | tig0042887:4011-4030 | Msa1463010:intron | 60.0% | |
| TAGACCGCCTGATTGCCTGG+AGG | + | tig0042887:4014-4033 | Msa1463010:intron | 60.0% | |
| AGACCGCCTGATTGCCTGGA+GGG | + | tig0042887:4015-4034 | Msa1463010:intron | 60.0% | |
| AAGCCCTCCAGGCAATCAGG+CGG | - | tig0042887:4021-4040 | Msa1463010:intergenic | 60.0% | |
| ! | GTCCGTTGGTCTGCAGCGAA+AGG | + | tig0042887:4229-4248 | Msa1463010:CDS | 60.0% |
| GCATGGAGGCTGCTTAGCGT+TGG | + | tig0042887:4815-4834 | Msa1463010:CDS | 60.0% | |
| AGTGGCATGCTACGACCGTG+AGG | + | tig0042887:5271-5290 | Msa1463010:CDS | 60.0% | |
| AGCAGCAGCAGCAGCTTTCC+AGG | + | tig0042887:5402-5421 | Msa1463010:CDS | 60.0% | |
| CCTGCCGTCCAACATTCTCC+TGG | - | tig0042887:5423-5442 | Msa1463010:intergenic | 60.0% | |
| CCAGGAGAATGTTGGACGGC+AGG | + | tig0042887:5420-5439 | Msa1463010:CDS | 60.0% | |
| AGTCAAATGGGGCAGTCCCG+TGG | + | tig0042887:5900-5919 | Msa1463010:intron | 60.0% | |
| CATGCGCCAGGGTGCAACAT+TGG | + | tig0042887:6755-6774 | Msa1463010:CDS | 60.0% | |
| CAGGGCGAGGGTTCATGGCA+TGG | + | tig0042887:4798-4817 | Msa1463010:intron | 65.0% | |
| GGCGAGGGTTCATGGCATGG+AGG | + | tig0042887:4801-4820 | Msa1463010:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0042887 | gene | 489 | 6827 | 489 | ID=Msa1463010;Name=Msa1463010 |
| tig0042887 | mRNA | 489 | 6827 | 489 | ID=Msa1463010-mRNA-1;Parent=Msa1463010;Name=Msa1463010-mRNA-1;_AED=0.11;_eAED=0.11;_QI=25|0.57|0.5|0.75|0.85|0.87|8|0|415 |
| tig0042887 | exon | 489 | 588 | 489 | ID=Msa1463010-mRNA-1:exon:23858;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 1442 | 1618 | 1442 | ID=Msa1463010-mRNA-1:exon:23859;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 2524 | 2709 | 2524 | ID=Msa1463010-mRNA-1:exon:23860;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 4220 | 4336 | 4220 | ID=Msa1463010-mRNA-1:exon:23861;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 4801 | 4908 | 4801 | ID=Msa1463010-mRNA-1:exon:23862;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 5122 | 5292 | 5122 | ID=Msa1463010-mRNA-1:exon:23863;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 5388 | 5603 | 5388 | ID=Msa1463010-mRNA-1:exon:23864;Parent=Msa1463010-mRNA-1 |
| tig0042887 | exon | 6633 | 6827 | 6633 | ID=Msa1463010-mRNA-1:exon:23865;Parent=Msa1463010-mRNA-1 |
| tig0042887 | five_prime_UTR | 489 | 513 | 489 | ID=Msa1463010-mRNA-1:five_prime_utr;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 514 | 588 | 514 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 1442 | 1618 | 1442 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 2524 | 2709 | 2524 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 4220 | 4336 | 4220 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 4801 | 4908 | 4801 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 5122 | 5292 | 5122 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 5388 | 5603 | 5388 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| tig0042887 | CDS | 6633 | 6827 | 6633 | ID=Msa1463010-mRNA-1:cds;Parent=Msa1463010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
