Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617170 | XP_013446495.1 | 88.469 | 529 | 29 | 2 | 1 | 498 | 1 | 528 | 0.0 | 954 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617170 | sp|Q7XII4|REM41_ORYSJ | 33.621 | 116 | 77 | 0 | 372 | 487 | 195 | 310 | 1.78e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa0617170 | 0.800620 | 1.323502e-48 | -8.615850e-47 |
| Msa0010490 | Msa0617170 | 0.800647 | 1.306616e-48 | -8.615850e-47 |
| Msa0020390 | Msa0617170 | 0.811781 | 5.894919e-51 | -8.615850e-47 |
| Msa0028930 | Msa0617170 | 0.807093 | 5.982667e-50 | -8.615850e-47 |
| Msa0029630 | Msa0617170 | 0.800565 | 1.357600e-48 | -8.615850e-47 |
| Msa0033880 | Msa0617170 | 0.800244 | 1.578395e-48 | -8.615850e-47 |
| Msa0036540 | Msa0617170 | 0.838934 | 2.140262e-57 | -8.615850e-47 |
| Msa0047160 | Msa0617170 | 0.803518 | 3.355672e-49 | -8.615850e-47 |
| Msa0080730 | Msa0617170 | 0.816406 | 5.622879e-52 | -8.615850e-47 |
| Msa0090520 | Msa0617170 | 0.819576 | 1.080319e-52 | -8.615850e-47 |
| Msa0090550 | Msa0617170 | 0.809311 | 2.014190e-50 | -8.615850e-47 |
| Msa0106620 | Msa0617170 | 0.827643 | 1.396924e-54 | -8.615850e-47 |
| Msa0106710 | Msa0617170 | 0.822262 | 2.601859e-53 | -8.615850e-47 |
| Msa0604290 | Msa0617170 | 0.807712 | 4.420001e-50 | -8.615850e-47 |
| Msa0615580 | Msa0617170 | 0.844016 | 9.812044e-59 | -8.615850e-47 |
| Msa0616450 | Msa0617170 | 0.844327 | 8.100008e-59 | -8.615850e-47 |
| Msa0617170 | Msa0619420 | 0.809959 | 1.462119e-50 | -8.615850e-47 |
| Msa0617170 | Msa0628420 | 0.810129 | 1.343663e-50 | -8.615850e-47 |
| Msa0617170 | Msa0629240 | 0.818022 | 2.434644e-52 | -8.615850e-47 |
| Msa0617170 | Msa0644030 | 0.811457 | 6.933357e-51 | -8.615850e-47 |
| Msa0617170 | Msa0655920 | 0.836147 | 1.109274e-56 | -8.615850e-47 |
| Msa0617170 | Msa0656180 | 0.825088 | 5.670373e-54 | -8.615850e-47 |
| Msa0617170 | Msa0659790 | 0.801739 | 7.810625e-49 | -8.615850e-47 |
| Msa0617170 | Msa0666230 | 0.802605 | 5.181529e-49 | -8.615850e-47 |
| Msa0617170 | Msa0672550 | 0.825169 | 5.425870e-54 | -8.615850e-47 |
| Msa0617170 | Msa0682680 | 0.824660 | 7.154840e-54 | -8.615850e-47 |
| Msa0617170 | Msa0689440 | 0.813707 | 2.233967e-51 | -8.615850e-47 |
| Msa0617170 | Msa0693330 | 0.800098 | 1.690264e-48 | -8.615850e-47 |
| Msa0617170 | Msa0697680 | 0.822269 | 2.593115e-53 | -8.615850e-47 |
| Msa0617170 | Msa0699980 | 0.964480 | 2.222472e-123 | -8.615850e-47 |
| Msa0617170 | Msa0705990 | 0.817800 | 2.732649e-52 | -8.615850e-47 |
| Msa0617170 | Msa0709120 | 0.844291 | 8.280113e-59 | -8.615850e-47 |
| Msa0617170 | Msa0735550 | 0.820301 | 7.375144e-53 | -8.615850e-47 |
| Msa0617170 | Msa0818770 | 0.802425 | 5.644206e-49 | -8.615850e-47 |
| Msa0617170 | Msa0826150 | 0.805991 | 1.021582e-49 | -8.615850e-47 |
| Msa0617170 | Msa0833190 | -0.826960 | 2.036186e-54 | -8.615850e-47 |
| Msa0617170 | Msa0840060 | 0.815179 | 1.055777e-51 | -8.615850e-47 |
| Msa0617170 | Msa0855110 | 0.843250 | 1.572614e-58 | -8.615850e-47 |
| Msa0617170 | Msa0892640 | 0.852410 | 4.703118e-61 | -8.615850e-47 |
| Msa0617170 | Msa0923780 | 0.801352 | 9.377615e-49 | -8.615850e-47 |
| Msa0617170 | Msa0933760 | 0.802066 | 6.690609e-49 | -8.615850e-47 |
| Msa0617170 | Msa0934140 | 0.827021 | 1.968717e-54 | -8.615850e-47 |
| Msa0617170 | Msa0944200 | 0.813461 | 2.530078e-51 | -8.615850e-47 |
| Msa0617170 | Msa0958000 | 0.826939 | 2.060339e-54 | -8.615850e-47 |
| Msa0617170 | Msa0974950 | 0.802396 | 5.722340e-49 | -8.615850e-47 |
| Msa0617170 | Msa1006840 | 0.800987 | 1.113306e-48 | -8.615850e-47 |
| Msa0617170 | Msa1021520 | 0.829310 | 5.529409e-55 | -8.615850e-47 |
| Msa0617170 | Msa1030080 | 0.800147 | 1.651788e-48 | -8.615850e-47 |
| Msa0617170 | Msa1051330 | 0.809997 | 1.434911e-50 | -8.615850e-47 |
| Msa0617170 | Msa1060260 | 0.857289 | 1.806979e-62 | -8.615850e-47 |
| Msa0617170 | Msa1072710 | 0.818442 | 1.956105e-52 | -8.615850e-47 |
| Msa0617170 | Msa1089450 | 0.856895 | 2.360167e-62 | -8.615850e-47 |
| Msa0617170 | Msa1096070 | 0.805068 | 1.595941e-49 | -8.615850e-47 |
| Msa0617170 | Msa1122310 | -0.806150 | 9.459422e-50 | -8.615850e-47 |
| Msa0617170 | Msa1123350 | 0.824098 | 9.699940e-54 | -8.615850e-47 |
| Msa0617170 | Msa1123770 | 0.822567 | 2.210306e-53 | -8.615850e-47 |
| Msa0617170 | Msa1126830 | 0.837410 | 5.285191e-57 | -8.615850e-47 |
| Msa0617170 | Msa1127590 | 0.816204 | 6.238083e-52 | -8.615850e-47 |
| Msa0617170 | Msa1128270 | 0.807032 | 6.161633e-50 | -8.615850e-47 |
| Msa0617170 | Msa1165270 | 0.800066 | 1.715343e-48 | -8.615850e-47 |
| Msa0617170 | Msa1165780 | 0.849422 | 3.267008e-60 | -8.615850e-47 |
| Msa0617170 | Msa1169910 | 0.820015 | 8.576209e-53 | -8.615850e-47 |
| Msa0617170 | Msa1201810 | 0.802629 | 5.124192e-49 | -8.615850e-47 |
| Msa0617170 | Msa1202580 | 0.813555 | 2.412563e-51 | -8.615850e-47 |
| Msa0617170 | Msa1209200 | 0.817438 | 3.297381e-52 | -8.615850e-47 |
| Msa0617170 | Msa1225860 | -0.818903 | 1.537213e-52 | -8.615850e-47 |
| Msa0617170 | Msa1234620 | 0.841114 | 5.780772e-58 | -8.615850e-47 |
| Msa0617170 | Msa1236110 | -0.830212 | 3.334475e-55 | -8.615850e-47 |
| Msa0617170 | Msa1262890 | 0.819415 | 1.175678e-52 | -8.615850e-47 |
| Msa0617170 | Msa1265590 | 0.831631 | 1.496121e-55 | -8.615850e-47 |
| Msa0617170 | Msa1265630 | 0.807447 | 5.032045e-50 | -8.615850e-47 |
| Msa0617170 | Msa1275480 | -0.820279 | 7.459246e-53 | -8.615850e-47 |
| Msa0617170 | Msa1275680 | 0.826170 | 3.142192e-54 | -8.615850e-47 |
| Msa0617170 | Msa1276970 | 0.828738 | 7.608314e-55 | -8.615850e-47 |
| Msa0617170 | Msa1298100 | 0.802423 | 5.650958e-49 | -8.615850e-47 |
| Msa0617170 | Msa1307180 | 0.832448 | 9.401247e-56 | -8.615850e-47 |
| Msa0617170 | Msa1316360 | 0.827750 | 1.316569e-54 | -8.615850e-47 |
| Msa0617170 | Msa1332590 | 0.814502 | 1.491363e-51 | -8.615850e-47 |
| Msa0617170 | Msa1337850 | 0.811212 | 7.839410e-51 | -8.615850e-47 |
| Msa0617170 | Msa1340200 | 0.813255 | 2.807637e-51 | -8.615850e-47 |
| Msa0617170 | Msa1342410 | 0.803217 | 3.872643e-49 | -8.615850e-47 |
| Msa0617170 | Msa1351540 | 0.843009 | 1.823261e-58 | -8.615850e-47 |
| Msa0617170 | Msa1369690 | 0.813537 | 2.435059e-51 | -8.615850e-47 |
| Msa0617170 | Msa1370590 | 0.824280 | 8.793203e-54 | -8.615850e-47 |
| Msa0617170 | Msa1381350 | 0.805641 | 1.210251e-49 | -8.615850e-47 |
| Msa0617170 | Msa1384100 | 0.826553 | 2.546825e-54 | -8.615850e-47 |
| Msa0617170 | Msa1385720 | 0.823584 | 1.280164e-53 | -8.615850e-47 |
| Msa0617170 | Msa1393840 | -0.811229 | 7.770526e-51 | -8.615850e-47 |
| Msa0617170 | Msa1395730 | 0.837639 | 4.616038e-57 | -8.615850e-47 |
| Msa0617170 | Msa1407190 | 0.801722 | 7.872778e-49 | -8.615850e-47 |
| Msa0617170 | Msa1411950 | 0.809311 | 2.014190e-50 | -8.615850e-47 |
| Msa0617170 | Msa1421900 | 0.802334 | 5.893070e-49 | -8.615850e-47 |
| Msa0617170 | Msa1422810 | 0.813551 | 2.417362e-51 | -8.615850e-47 |
| Msa0617170 | Msa1424350 | 0.804587 | 2.011463e-49 | -8.615850e-47 |
| Msa0617170 | Msa1432130 | 0.800705 | 1.271298e-48 | -8.615850e-47 |
| Msa0617170 | Msa1434090 | 0.839088 | 1.952792e-57 | -8.615850e-47 |
| Msa0617170 | Msa1435390 | 0.817748 | 2.807965e-52 | -8.615850e-47 |
| Msa0617170 | Msa1440930 | 0.813486 | 2.498005e-51 | -8.615850e-47 |
| Msa0617170 | Msa1444120 | 0.827614 | 1.419488e-54 | -8.615850e-47 |
| Msa0617170 | Msa1458090 | 0.813305 | 2.738212e-51 | -8.615850e-47 |
| Msa0617170 | Msa1459960 | 0.816564 | 5.181176e-52 | -8.615850e-47 |
| Msa0617170 | Msa1461540 | 0.816944 | 4.258812e-52 | -8.615850e-47 |
| Msa0120880 | Msa0617170 | 0.818976 | 1.479810e-52 | -8.615850e-47 |
| Msa0124450 | Msa0617170 | 0.841317 | 5.112636e-58 | -8.615850e-47 |
| Msa0136120 | Msa0617170 | 0.816485 | 5.397447e-52 | -8.615850e-47 |
| Msa0137990 | Msa0617170 | 0.819147 | 1.352666e-52 | -8.615850e-47 |
| Msa0139670 | Msa0617170 | 0.845193 | 4.730330e-59 | -8.615850e-47 |
| Msa0149440 | Msa0617170 | 0.812688 | 3.737214e-51 | -8.615850e-47 |
| Msa0173800 | Msa0617170 | 0.811914 | 5.517311e-51 | -8.615850e-47 |
| Msa0178950 | Msa0617170 | 0.801166 | 1.023479e-48 | -8.615850e-47 |
| Msa0183850 | Msa0617170 | 0.803918 | 2.770950e-49 | -8.615850e-47 |
| Msa0183870 | Msa0617170 | 0.818189 | 2.232246e-52 | -8.615850e-47 |
| Msa0183900 | Msa0617170 | 0.809717 | 1.648279e-50 | -8.615850e-47 |
| Msa0188350 | Msa0617170 | 0.820348 | 7.192704e-53 | -8.615850e-47 |
| Msa0192640 | Msa0617170 | 0.815196 | 1.046406e-51 | -8.615850e-47 |
| Msa0199940 | Msa0617170 | 0.806770 | 7.000269e-50 | -8.615850e-47 |
| Msa0202410 | Msa0617170 | 0.823310 | 1.484186e-53 | -8.615850e-47 |
| Msa0204960 | Msa0617170 | 0.843312 | 1.514093e-58 | -8.615850e-47 |
| Msa0220990 | Msa0617170 | 0.813699 | 2.242686e-51 | -8.615850e-47 |
| Msa0223330 | Msa0617170 | 0.806895 | 6.587916e-50 | -8.615850e-47 |
| Msa0231100 | Msa0617170 | 0.804226 | 2.391541e-49 | -8.615850e-47 |
| Msa0233370 | Msa0617170 | 0.819713 | 1.004947e-52 | -8.615850e-47 |
| Msa0234090 | Msa0617170 | 0.800147 | 1.651986e-48 | -8.615850e-47 |
| Msa0382370 | Msa0617170 | 0.830297 | 3.179854e-55 | -8.615850e-47 |
| Msa0385500 | Msa0617170 | 0.839876 | 1.219122e-57 | -8.615850e-47 |
| Msa0419720 | Msa0617170 | 0.819954 | 8.852859e-53 | -8.615850e-47 |
| Msa0432160 | Msa0617170 | 0.809971 | 1.453750e-50 | -8.615850e-47 |
| Msa0437020 | Msa0617170 | 0.834009 | 3.839937e-56 | -8.615850e-47 |
| Msa0443390 | Msa0617170 | 0.800289 | 1.545197e-48 | -8.615850e-47 |
| Msa0445330 | Msa0617170 | 0.805097 | 1.573627e-49 | -8.615850e-47 |
| Msa0450400 | Msa0617170 | -0.840329 | 9.283007e-58 | -8.615850e-47 |
| Msa0463850 | Msa0617170 | 0.821904 | 3.151044e-53 | -8.615850e-47 |
| Msa0472770 | Msa0617170 | 0.807967 | 3.902865e-50 | -8.615850e-47 |
| Msa0476680 | Msa0617170 | 0.815013 | 1.148821e-51 | -8.615850e-47 |
| Msa0481970 | Msa0617170 | 0.828695 | 7.792158e-55 | -8.615850e-47 |
| Msa0240900 | Msa0617170 | 0.836809 | 7.528570e-57 | -8.615850e-47 |
| Msa0241830 | Msa0617170 | 0.841688 | 4.083624e-58 | -8.615850e-47 |
| Msa0244970 | Msa0617170 | 0.845019 | 5.270785e-59 | -8.615850e-47 |
| Msa0244980 | Msa0617170 | 0.849525 | 3.057341e-60 | -8.615850e-47 |
| Msa0245580 | Msa0617170 | 0.805422 | 1.345448e-49 | -8.615850e-47 |
| Msa0257490 | Msa0617170 | 0.823694 | 1.206714e-53 | -8.615850e-47 |
| Msa0261170 | Msa0617170 | 0.832794 | 7.713005e-56 | -8.615850e-47 |
| Msa0279850 | Msa0617170 | 0.818930 | 1.516072e-52 | -8.615850e-47 |
| Msa0281530 | Msa0617170 | 0.862003 | 6.894525e-64 | -8.615850e-47 |
| Msa0283420 | Msa0617170 | 0.838914 | 2.166132e-57 | -8.615850e-47 |
| Msa0295460 | Msa0617170 | -0.829301 | 5.556736e-55 | -8.615850e-47 |
| Msa0296250 | Msa0617170 | 0.813264 | 2.794615e-51 | -8.615850e-47 |
| Msa0296790 | Msa0617170 | 0.837814 | 4.162043e-57 | -8.615850e-47 |
| Msa0317970 | Msa0617170 | 0.854057 | 1.586272e-61 | -8.615850e-47 |
| Msa0320590 | Msa0617170 | 0.853937 | 1.717438e-61 | -8.615850e-47 |
| Msa0321690 | Msa0617170 | 0.861666 | 8.739194e-64 | -8.615850e-47 |
| Msa0322240 | Msa0617170 | 0.810642 | 1.041360e-50 | -8.615850e-47 |
| Msa0322900 | Msa0617170 | 0.850284 | 1.875854e-60 | -8.615850e-47 |
| Msa0341690 | Msa0617170 | 0.806153 | 9.447873e-50 | -8.615850e-47 |
| Msa0357900 | Msa0617170 | 0.819413 | 1.176456e-52 | -8.615850e-47 |
| Msa0482940 | Msa0617170 | 0.827427 | 1.573548e-54 | -8.615850e-47 |
| Msa0491000 | Msa0617170 | 0.813334 | 2.698369e-51 | -8.615850e-47 |
| Msa0511770 | Msa0617170 | 0.829901 | 3.971909e-55 | -8.615850e-47 |
| Msa0518030 | Msa0617170 | 0.802904 | 4.495845e-49 | -8.615850e-47 |
| Msa0521010 | Msa0617170 | 0.817636 | 2.976379e-52 | -8.615850e-47 |
| Msa0531250 | Msa0617170 | 0.821840 | 3.259207e-53 | -8.615850e-47 |
| Msa0531650 | Msa0617170 | 0.812252 | 4.653988e-51 | -8.615850e-47 |
| Msa0542490 | Msa0617170 | 0.811845 | 5.708800e-51 | -8.615850e-47 |
| Msa0547160 | Msa0617170 | 0.825139 | 5.515905e-54 | -8.615850e-47 |
| Msa0547990 | Msa0617170 | 0.812651 | 3.809069e-51 | -8.615850e-47 |
| Msa0569780 | Msa0617170 | 0.817311 | 3.522612e-52 | -8.615850e-47 |
| Msa0581110 | Msa0617170 | 0.837929 | 3.889032e-57 | -8.615850e-47 |
| Msa0581280 | Msa0617170 | 0.831486 | 1.624716e-55 | -8.615850e-47 |
| Msa0583360 | Msa0617170 | -0.816215 | 6.201778e-52 | -8.615850e-47 |
| Msa0588090 | Msa0617170 | 0.812183 | 4.818896e-51 | -8.615850e-47 |
| Msa0592330 | Msa0617170 | 0.800930 | 1.143593e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617170 | MtrunA17_Chr8g0376741 | 88.469 | 529 | 29 | 2 | 1 | 498 | 1 | 528 | 0.0 | 954 |
| Msa0617170 | MtrunA17_Chr8g0375241 | 38.448 | 554 | 236 | 17 | 1 | 498 | 1 | 505 | 2.87e-77 | 251 |
| Msa0617170 | MtrunA17_Chr8g0377061 | 39.241 | 237 | 109 | 5 | 258 | 493 | 151 | 353 | 5.18e-36 | 137 |
| Msa0617170 | MtrunA17_Chr8g0345191 | 26.154 | 390 | 251 | 10 | 121 | 494 | 86 | 454 | 8.23e-18 | 85.9 |
| Msa0617170 | MtrunA17_Chr1g0153281 | 24.874 | 398 | 241 | 12 | 113 | 494 | 262 | 617 | 2.45e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617170 | AT1G30320.1 | 50.000 | 548 | 184 | 18 | 1 | 498 | 1 | 508 | 5.86e-155 | 451 |
| Msa0617170 | AT2G02170.1 | 38.196 | 521 | 259 | 18 | 1 | 494 | 1 | 485 | 1.03e-68 | 228 |
| Msa0617170 | AT2G02170.2 | 38.196 | 521 | 259 | 18 | 1 | 494 | 1 | 485 | 1.03e-68 | 228 |
| Msa0617170 | AT2G02170.5 | 38.196 | 521 | 259 | 18 | 1 | 494 | 1 | 485 | 1.03e-68 | 228 |
| Msa0617170 | AT2G02170.4 | 38.196 | 521 | 259 | 18 | 1 | 494 | 1 | 485 | 1.03e-68 | 228 |
| Msa0617170 | AT2G02170.3 | 41.299 | 385 | 185 | 11 | 123 | 494 | 4 | 360 | 4.95e-61 | 204 |
| Msa0617170 | AT2G02170.6 | 41.299 | 385 | 185 | 11 | 123 | 494 | 4 | 360 | 4.95e-61 | 204 |
| Msa0617170 | AT1G67590.1 | 31.043 | 393 | 184 | 10 | 105 | 489 | 20 | 333 | 9.08e-42 | 152 |
| Msa0617170 | AT1G67590.2 | 29.080 | 337 | 152 | 10 | 105 | 433 | 20 | 277 | 8.74e-27 | 109 |
| Msa0617170 | AT1G53860.1 | 27.072 | 362 | 188 | 11 | 127 | 477 | 119 | 415 | 7.32e-16 | 80.1 |
| Msa0617170 | AT1G53860.2 | 27.072 | 362 | 188 | 11 | 127 | 477 | 51 | 347 | 7.70e-16 | 79.7 |
Find 140 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATGCTCATTCGGTTTC+TGG | 0.054743 | 4_2:+67574066 | Msa0617170:CDS |
| CTCTTTGTGTGTAATTAATT+TGG | 0.150842 | 4_2:-67572301 | None:intergenic |
| TCTCATTTCGGCTTCTAATT+TGG | 0.168366 | 4_2:-67574999 | None:intergenic |
| GTTGAAGGCATTGATGAAAT+TGG | 0.206244 | 4_2:-67574539 | None:intergenic |
| TCCCCAAAGCAAAGATTTAA+AGG | 0.207930 | 4_2:+67574125 | Msa0617170:CDS |
| AAACTGAGGATGAAGTTATT+AGG | 0.255888 | 4_2:+67573116 | Msa0617170:CDS |
| AGCCTCTTACACCATACTTA+TGG | 0.262246 | 4_2:-67575975 | None:intergenic |
| CTTCCTTTAAATCTTTGCTT+TGG | 0.266613 | 4_2:-67574128 | None:intergenic |
| GCCACAACACGTAATGTAAT+TGG | 0.275408 | 4_2:-67575666 | None:intergenic |
| TGCACCAGCTCCTACGCCTT+TGG | 0.284602 | 4_2:+67574574 | Msa0617170:CDS |
| TTCCTTTAAATCTTTGCTTT+GGG | 0.293865 | 4_2:-67574127 | None:intergenic |
| GTTTGAAAATTACAAGGTTT+TGG | 0.308450 | 4_2:-67575802 | None:intergenic |
| TCCAGTACCGCATCCCTAAA+TGG | 0.308863 | 4_2:-67573574 | None:intergenic |
| ACACGTAATGTAATTGGAAT+AGG | 0.310425 | 4_2:-67575660 | None:intergenic |
| CCTATTCATTATCCATTTCT+CGG | 0.311474 | 4_2:-67573845 | None:intergenic |
| TCGGCATCGTTCCACTTAGA+AGG | 0.333810 | 4_2:-67573826 | None:intergenic |
| CCCTTTGTCAAACTCGAAAC+TGG | 0.334570 | 4_2:-67573755 | None:intergenic |
| GAAACAGTTCCCATGGAAAA+TGG | 0.340711 | 4_2:+67573610 | Msa0617170:CDS |
| ATCTGTTGCCATGAGAGATA+TGG | 0.344001 | 4_2:+67574436 | Msa0617170:CDS |
| CTTTATCTTCATTTCTTCTT+CGG | 0.345166 | 4_2:-67574654 | None:intergenic |
| AAGGTTCTTGACTTGGCAAC+GGG | 0.361658 | 4_2:-67574472 | None:intergenic |
| TACCTCGGTTCTTCTCATTT+CGG | 0.362154 | 4_2:-67575011 | None:intergenic |
| TGCTCTCATTTGCTCAACTT+TGG | 0.363358 | 4_2:-67575492 | None:intergenic |
| GCACCAGCTCCTACGCCTTT+GGG | 0.363364 | 4_2:+67574575 | Msa0617170:CDS |
| TTTCTGCAACCTTGCTTGTC+GGG | 0.363834 | 4_2:-67573972 | None:intergenic |
| AAATCGCTTGCCAACAAGTA+TGG | 0.364627 | 4_2:+67573909 | Msa0617170:CDS |
| CAGCCCTTGGTATGCAGCTT+GGG | 0.366210 | 4_2:+67574693 | Msa0617170:CDS |
| GCCATTTAGGGATGCGGTAC+TGG | 0.367524 | 4_2:+67573573 | Msa0617170:CDS |
| TTTGTCATCAAAGCCATTTA+GGG | 0.376925 | 4_2:+67573561 | Msa0617170:CDS |
| TTCGACGACCCTATCCTTCA+AGG | 0.377104 | 4_2:-67575758 | None:intergenic |
| TGTTCCATCTGATGCTCATT+CGG | 0.381690 | 4_2:+67574059 | Msa0617170:CDS |
| TAGAAGGAATAGGTCTCAAC+AGG | 0.383911 | 4_2:-67573810 | None:intergenic |
| GTTTCTGCAACCTTGCTTGT+CGG | 0.387691 | 4_2:-67573973 | None:intergenic |
| GCCTCTTACACCATACTTAT+GGG | 0.389667 | 4_2:-67575974 | None:intergenic |
| AACTGAGGATGAAGTTATTA+GGG | 0.391166 | 4_2:+67573117 | Msa0617170:CDS |
| AAGTCAATGTCCCATAAGTA+TGG | 0.393607 | 4_2:+67575964 | Msa0617170:three_prime_UTR |
| GGTGAAAAGATAAGCAATCT+TGG | 0.400192 | 4_2:-67575737 | None:intergenic |
| GCAGAATACATACGCCAAAC+AGG | 0.401814 | 4_2:+67575629 | Msa0617170:CDS |
| ATTAGAGCAAACAACTCAAT+TGG | 0.408849 | 4_2:-67575904 | None:intergenic |
| TCTAATGATGCAGCATTTCC+CGG | 0.413013 | 4_2:+67574407 | Msa0617170:intron |
| GAACTGTTTCCTTTAGTCTC+TGG | 0.416317 | 4_2:-67573597 | None:intergenic |
| AACTTCATCCTCAGTTTACT+AGG | 0.419998 | 4_2:-67573110 | None:intergenic |
| TCTATTCTCTCGTACTCCAT+TGG | 0.423503 | 4_2:-67572354 | None:intergenic |
| CCGAGAAATGGATAATGAAT+AGG | 0.423948 | 4_2:+67573845 | Msa0617170:CDS |
| GATGAAATTGGGCTGCGAAT+TGG | 0.427717 | 4_2:-67574527 | None:intergenic |
| GATGACAAAACTTCTAAGCT+TGG | 0.428034 | 4_2:-67573547 | None:intergenic |
| GAGCTTATGATCAAAATTAC+CGG | 0.430720 | 4_2:-67573950 | None:intergenic |
| ACAACCCTTGCCATACTTGT+TGG | 0.432189 | 4_2:-67573919 | None:intergenic |
| CACGTAATGTAATTGGAATA+GGG | 0.435360 | 4_2:-67575659 | None:intergenic |
| AGTGGAACGATGCCGAGAAA+TGG | 0.438539 | 4_2:+67573833 | Msa0617170:CDS |
| AGATCTTCAACATACCTGTT+TGG | 0.440565 | 4_2:-67574191 | None:intergenic |
| TTGGATCCATCCTTCTTCCT+AGG | 0.443938 | 4_2:-67573140 | None:intergenic |
| ATTGGAGTTGCCGAACCAAC+AGG | 0.447886 | 4_2:-67574509 | None:intergenic |
| AAGAAGTGTTTGTGTTGTGT+TGG | 0.448523 | 4_2:-67572107 | None:intergenic |
| TCCAATTACATTACGTGTTG+TGG | 0.449449 | 4_2:+67575665 | Msa0617170:CDS |
| GTCTGCGAAGGTTCTTGACT+TGG | 0.450199 | 4_2:-67574479 | None:intergenic |
| GACAACCACTCCTGTTGGTT+CGG | 0.450723 | 4_2:+67574499 | Msa0617170:CDS |
| TCATCTTCTGTTGTCCTCAC+CGG | 0.465871 | 4_2:-67573700 | None:intergenic |
| GCAGCCCTTGGTATGCAGCT+TGG | 0.466742 | 4_2:+67574692 | Msa0617170:CDS |
| TTGAAGGCATTGATGAAATT+GGG | 0.468593 | 4_2:-67574538 | None:intergenic |
| TCCCATAAGTATGGTGTAAG+AGG | 0.471375 | 4_2:+67575973 | Msa0617170:three_prime_UTR |
| GCACCTCTCCTAGGAGTTGA+AGG | 0.472388 | 4_2:-67574554 | None:intergenic |
| CATCAATGCCTTCAACTCCT+AGG | 0.472519 | 4_2:+67574546 | Msa0617170:CDS |
| GGATGAAGTTATTAGGGCCT+AGG | 0.474251 | 4_2:+67573123 | Msa0617170:CDS |
| GCAAGGGTTGTTCCAGAGTC+CGG | 0.475806 | 4_2:+67573931 | Msa0617170:CDS |
| ACCAACATCACATTCACATA+TGG | 0.482451 | 4_2:+67574017 | Msa0617170:CDS |
| TGATCAAAATTACCGGACTC+TGG | 0.489006 | 4_2:-67573943 | None:intergenic |
| CCAGTTTCGAGTTTGACAAA+GGG | 0.491171 | 4_2:+67573755 | Msa0617170:CDS |
| AGAAGTGTTTGTGTTGTGTT+GGG | 0.491904 | 4_2:-67572106 | None:intergenic |
| CATGTAAGCAACTTGCGCTC+AGG | 0.493031 | 4_2:-67575826 | None:intergenic |
| TGGGGAAAAGATTCCACTAC+AGG | 0.495981 | 4_2:-67574108 | None:intergenic |
| TCGTTCCACTTAGAAGGAAT+AGG | 0.499778 | 4_2:-67573820 | None:intergenic |
| TCTGTTGCCATGAGAGATAT+GGG | 0.500342 | 4_2:+67574437 | Msa0617170:CDS |
| CATGGCAACAGATCTTATAC+CGG | 0.506420 | 4_2:-67574426 | None:intergenic |
| AGAGAAAGAGAAAGATCCAA+TGG | 0.516098 | 4_2:+67572338 | Msa0617170:exon |
| TAGCCCAAAGGCGTAGGAGC+TGG | 0.518675 | 4_2:-67574578 | None:intergenic |
| TGAGACCTATTCCTTCTAAG+TGG | 0.521862 | 4_2:+67573815 | Msa0617170:CDS |
| TCGGTTTCTGGTCAAGCACA+TGG | 0.522303 | 4_2:+67574078 | Msa0617170:CDS |
| GTTATTAGGGCCTAGGAAGA+AGG | 0.524411 | 4_2:+67573130 | Msa0617170:CDS |
| GTTTGACAAAGGGGAGAGAC+CGG | 0.525316 | 4_2:+67573765 | Msa0617170:CDS |
| GAAGGTTCTTGACTTGGCAA+CGG | 0.526189 | 4_2:-67574473 | None:intergenic |
| AGGAGAGAGATTGCAGCCCT+TGG | 0.526966 | 4_2:+67574680 | Msa0617170:CDS |
| ACAAGTATAGATGACCAAAC+AGG | 0.527668 | 4_2:+67574177 | Msa0617170:CDS |
| TCCTTTAAATCTTTGCTTTG+GGG | 0.528138 | 4_2:-67574126 | None:intergenic |
| CTCAGTTCCCATATCTCTCA+TGG | 0.536233 | 4_2:-67574444 | None:intergenic |
| AAGTTCGAGCACAATTCATC+CGG | 0.540711 | 4_2:+67573681 | Msa0617170:CDS |
| GGAGCTGGTGCACCTCTCCT+AGG | 0.542004 | 4_2:-67574563 | None:intergenic |
| TTTAAAGGAAGTAAATGAAG+TGG | 0.542565 | 4_2:+67574140 | Msa0617170:CDS |
| CGAGAGAATAGAGAAACCTC+AGG | 0.546664 | 4_2:+67572365 | Msa0617170:CDS |
| AAGAAATGAAGATAAAGACT+AGG | 0.548657 | 4_2:+67574660 | Msa0617170:CDS |
| GAGAGAGTTGGAGAAAGAAG+AGG | 0.548698 | 4_2:-67572130 | None:intergenic |
| ATCAAAGCCATTTAGGGATG+CGG | 0.550723 | 4_2:+67573567 | Msa0617170:CDS |
| AGGAAATCAAAATTCAAGCA+TGG | 0.550902 | 4_2:+67574960 | Msa0617170:CDS |
| GGAAATCAAAATTCAAGCAT+GGG | 0.551510 | 4_2:+67574961 | Msa0617170:CDS |
| GAAAATGAATATTGCGGCGT+GGG | 0.554349 | 4_2:+67574715 | Msa0617170:CDS |
| ATTACATTACGTGTTGTGGC+TGG | 0.559591 | 4_2:+67575669 | Msa0617170:CDS |
| TCCAGTTTCGAGTTTGACAA+AGG | 0.560496 | 4_2:+67573754 | Msa0617170:CDS |
| TCGAAACTGTGGATCCTCAT+CGG | 0.563666 | 4_2:-67574606 | None:intergenic |
| GCCATATGTGAATGTGATGT+TGG | 0.565396 | 4_2:-67574018 | None:intergenic |
| ACTAAAGGAAACAGTTCCCA+TGG | 0.568312 | 4_2:+67573603 | Msa0617170:CDS |
| GTATGGTGTAAGAGGCTGTA+GGG | 0.579549 | 4_2:+67575981 | Msa0617170:three_prime_UTR |
| TCGCAGACAACCACTCCTGT+TGG | 0.579751 | 4_2:+67574494 | Msa0617170:CDS |
| TCAGGTGTTTGAAAATTACA+AGG | 0.580529 | 4_2:-67575808 | None:intergenic |
| ACATGGAAAACCACCTGTAG+TGG | 0.584283 | 4_2:+67574095 | Msa0617170:CDS |
| TTGTGTGTAATTAATTTGGA+AGG | 0.586449 | 4_2:-67572297 | None:intergenic |
| ACAGGAGTGGTTGTCTGCGA+AGG | 0.590207 | 4_2:-67574491 | None:intergenic |
| TTTCCCAAGCTGCATACCAA+GGG | 0.594079 | 4_2:-67574696 | None:intergenic |
| GGAAAAGATTCCACTACAGG+TGG | 0.603799 | 4_2:-67574105 | None:intergenic |
| GTTCTTTAGTATCTGTGTCG+CGG | 0.605999 | 4_2:-67574775 | None:intergenic |
| GTTGTGTAGCCCAAAGGCGT+AGG | 0.606013 | 4_2:-67574584 | None:intergenic |
| CAGTTTCGAGTTTGACAAAG+GGG | 0.609310 | 4_2:+67573756 | Msa0617170:CDS |
| TCATCGGTTGTGTAGCCCAA+AGG | 0.610226 | 4_2:-67574590 | None:intergenic |
| GCTTGCCAACAAGTATGGCA+AGG | 0.611719 | 4_2:+67573914 | Msa0617170:CDS |
| TAATGCAAAAGAGAAGATGA+TGG | 0.613512 | 4_2:-67572268 | None:intergenic |
| TTGTTGGCAAGCGATTTGCT+TGG | 0.614077 | 4_2:-67573903 | None:intergenic |
| GCTGTTAATATAAATGTACA+AGG | 0.616736 | 4_2:+67575935 | Msa0617170:three_prime_UTR |
| AGCATGGGAAAGTCAGCAGA+AGG | 0.617084 | 4_2:+67574976 | Msa0617170:CDS |
| CAGAATACATACGCCAAACA+GGG | 0.617750 | 4_2:+67575630 | Msa0617170:CDS |
| TTAGGGCCTAGGAAGAAGGA+TGG | 0.620809 | 4_2:+67573134 | Msa0617170:CDS |
| ATGGCAACAGATCTTATACC+GGG | 0.621195 | 4_2:-67574425 | None:intergenic |
| CTTGCCAACAAGTATGGCAA+GGG | 0.624345 | 4_2:+67573915 | Msa0617170:CDS |
| CTACTTACATGATTGCTCAC+CGG | 0.624396 | 4_2:-67573784 | None:intergenic |
| AGTATGGTGTAAGAGGCTGT+AGG | 0.632019 | 4_2:+67575980 | Msa0617170:three_prime_UTR |
| GGAAAATGAATATTGCGGCG+TGG | 0.638919 | 4_2:+67574714 | Msa0617170:CDS |
| CCCATGGAAAATGGTAACAC+AGG | 0.642223 | 4_2:+67573619 | Msa0617170:CDS |
| GAAACCGAATGAGCATCAGA+TGG | 0.642347 | 4_2:-67574063 | None:intergenic |
| AACTTGCAGATTAAAGCGTG+AGG | 0.643053 | 4_2:+67574940 | Msa0617170:intron |
| GGTACTGGACCAGAGACTAA+AGG | 0.644572 | 4_2:+67573588 | Msa0617170:CDS |
| TCATAAGCTCCCGACAAGCA+AGG | 0.648251 | 4_2:+67573963 | Msa0617170:CDS |
| ATGCCTTCAACTCCTAGGAG+AGG | 0.654548 | 4_2:+67574551 | Msa0617170:CDS |
| AGTTGCCGAACCAACAGGAG+TGG | 0.660068 | 4_2:-67574504 | None:intergenic |
| GCTTGGGAAAATGAATATTG+CGG | 0.668278 | 4_2:+67574709 | Msa0617170:CDS |
| AGCCGAAATGAGAAGAACCG+AGG | 0.675110 | 4_2:+67575009 | Msa0617170:CDS |
| CTGTGAGATATATAACATTG+TGG | 0.693122 | 4_2:+67575692 | Msa0617170:exon |
| CGAGCACAATTCATCCGGTG+AGG | 0.693910 | 4_2:+67573686 | Msa0617170:CDS |
| AAAACGTGCTGCTTTGTGGG+AGG | 0.698856 | 4_2:+67574817 | Msa0617170:CDS |
| TTTGGGCTACACAACCGATG+AGG | 0.701696 | 4_2:+67574592 | Msa0617170:CDS |
| TAATTTCTCCTAGTAAACTG+AGG | 0.702685 | 4_2:+67573102 | Msa0617170:CDS |
| AGGTTCTTGACTTGGCAACG+GGG | 0.722190 | 4_2:-67574471 | None:intergenic |
| AGAAGGAATAGGTCTCAACA+GGG | 0.732599 | 4_2:-67573809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTGTTGTTATTATT+TGG | + | chr4_2:67572530-67572549 | Msa0617170:intron | 10.0% |
| !! | TGAAGTTTAATAAAAAAAAT+GGG | - | chr4_2:67572599-67572618 | None:intergenic | 10.0% |
| !! | TTGAAGTTTAATAAAAAAAA+TGG | - | chr4_2:67572600-67572619 | None:intergenic | 10.0% |
| !! | ATAATTACATTTAAAAAATC+AGG | - | chr4_2:67574910-67574929 | None:intergenic | 10.0% |
| !! | AAAATTCATTACTTCAAATT+TGG | + | chr4_2:67572656-67572675 | Msa0617170:intron | 15.0% |
| !!! | TTTTTTCTCTTTCAAAAACT+GGG | + | chr4_2:67572478-67572497 | Msa0617170:intron | 20.0% |
| !!! | AATAACAACAATTTTATGAG+AGG | - | chr4_2:67572527-67572546 | None:intergenic | 20.0% |
| !!! | ATATTTCTAAACAAAGCAAA+TGG | + | chr4_2:67572625-67572644 | Msa0617170:intron | 20.0% |
| !! | CAAATCGTGTTAATATTATA+TGG | - | chr4_2:67574224-67574243 | None:intergenic | 20.0% |
| !!! | TTATAAAGCATTATGAACTA+AGG | + | chr4_2:67575110-67575129 | Msa0617170:intron | 20.0% |
| !!! | TTATACGTACTTTTTCATAA+GGG | - | chr4_2:67575197-67575216 | None:intergenic | 20.0% |
| !!! | TTTATACGTACTTTTTCATA+AGG | - | chr4_2:67575198-67575217 | None:intergenic | 20.0% |
| !! | TATAAATTTCGCATTGTTTA+TGG | + | chr4_2:67575212-67575231 | Msa0617170:intron | 20.0% |
| !!! | TTCTAAGAGTATAGAAATAA+CGG | - | chr4_2:67575317-67575336 | None:intergenic | 20.0% |
| !!! | ATAATGGAAAGAAAATCATA+TGG | - | chr4_2:67575370-67575389 | None:intergenic | 20.0% |
| !! | TTCACATTGCAATTAAATAA+TGG | - | chr4_2:67575386-67575405 | None:intergenic | 20.0% |
| !! | TTGAAACTATATGCAAATAT+AGG | + | chr4_2:67575469-67575488 | Msa0617170:intron | 20.0% |
| !! | TTGTGTGTAATTAATTTGGA+AGG | - | chr4_2:67572300-67572319 | None:intergenic | 25.0% |
| ! | CTCTTTGTGTGTAATTAATT+TGG | - | chr4_2:67572304-67572323 | None:intergenic | 25.0% |
| !! | GTAAAAAGCATGAACTAAAA+TGG | - | chr4_2:67572441-67572460 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTCTTTCAAAAAC+TGG | + | chr4_2:67572477-67572496 | Msa0617170:intron | 25.0% |
| !! | ACAATTTTATGAGAGGAAAA+AGG | - | chr4_2:67572520-67572539 | None:intergenic | 25.0% |
| ! | ACTTCAAATTTGGAAGTAAA+TGG | + | chr4_2:67572666-67572685 | Msa0617170:intron | 25.0% |
| ! | ATAATTAATTGTTTGATGCG+CGG | + | chr4_2:67572817-67572836 | Msa0617170:intron | 25.0% |
| !!! | GTGATATGGGTTAAAATTTT+GGG | + | chr4_2:67572925-67572944 | Msa0617170:intron | 25.0% |
| !!! | TGATATGGGTTAAAATTTTG+GGG | + | chr4_2:67572926-67572945 | Msa0617170:intron | 25.0% |
| ! | ATTAGTTATGAGGCTAAATA+TGG | + | chr4_2:67573048-67573067 | Msa0617170:intron | 25.0% |
| !!! | ATGTTTTAGTTAGTTCCAAA+AGG | - | chr4_2:67573508-67573527 | None:intergenic | 25.0% |
| ! | TTCCTTTAAATCTTTGCTTT+GGG | - | chr4_2:67574130-67574149 | None:intergenic | 25.0% |
| ! | TTTAAAGGAAGTAAATGAAG+TGG | + | chr4_2:67574140-67574159 | Msa0617170:CDS | 25.0% |
| ! | AATCTGAATGACCAATTAAA+AGG | + | chr4_2:67574279-67574298 | Msa0617170:intron | 25.0% |
| !! | CATATGAATGACCTTTTAAT+TGG | - | chr4_2:67574293-67574312 | None:intergenic | 25.0% |
| ! | CTTTATCTTCATTTCTTCTT+CGG | - | chr4_2:67574657-67574676 | None:intergenic | 25.0% |
| ! | AAGAAATGAAGATAAAGACT+AGG | + | chr4_2:67574660-67574679 | Msa0617170:CDS | 25.0% |
| ! | AAAAATCTAAACATACTGCA+AGG | + | chr4_2:67574846-67574865 | Msa0617170:CDS | 25.0% |
| !! | GTTTGAAAATTACAAGGTTT+TGG | - | chr4_2:67575805-67575824 | None:intergenic | 25.0% |
| ! | GCTGTTAATATAAATGTACA+AGG | + | chr4_2:67575935-67575954 | Msa0617170:three_prime_UTR | 25.0% |
| TAATGCAAAAGAGAAGATGA+TGG | - | chr4_2:67572271-67572290 | None:intergenic | 30.0% | |
| AAATCAAGGTAAAGGAATGT+TGG | - | chr4_2:67572398-67572417 | None:intergenic | 30.0% | |
| AGAAGATGAAATCAAGGTAA+AGG | - | chr4_2:67572406-67572425 | None:intergenic | 30.0% | |
| TTTACCTTGATTTCATCTTC+TGG | + | chr4_2:67572405-67572424 | Msa0617170:intron | 30.0% | |
| TTACCTTGATTTCATCTTCT+GGG | + | chr4_2:67572406-67572425 | Msa0617170:intron | 30.0% | |
| !! | TTCCTATGAGCTTGTTAAAT+TGG | + | chr4_2:67572703-67572722 | Msa0617170:intron | 30.0% |
| AACCAATTTAACAAGCTCAT+AGG | - | chr4_2:67572708-67572727 | None:intergenic | 30.0% | |
| TAATTAATTGTTTGATGCGC+GGG | + | chr4_2:67572818-67572837 | Msa0617170:intron | 30.0% | |
| !! | TTTCTCTCATTTTTCTTCTG+AGG | + | chr4_2:67572896-67572915 | Msa0617170:intron | 30.0% |
| !! | CATTTTTCTTCTGAGGAAAA+CGG | + | chr4_2:67572903-67572922 | Msa0617170:intron | 30.0% |
| !! | GGTGATATGGGTTAAAATTT+TGG | + | chr4_2:67572924-67572943 | Msa0617170:intron | 30.0% |
| !! | GATATGGGTTAAAATTTTGG+GGG | + | chr4_2:67572927-67572946 | Msa0617170:intron | 30.0% |
| ! | TTATGTAGTGTGCTTTAAGT+TGG | + | chr4_2:67572992-67573011 | Msa0617170:intron | 30.0% |
| ! | GTTGTTCTAGATTAGTTATG+AGG | + | chr4_2:67573038-67573057 | Msa0617170:intron | 30.0% |
| TAATTTCTCCTAGTAAACTG+AGG | + | chr4_2:67573102-67573121 | Msa0617170:CDS | 30.0% | |
| AAACTGAGGATGAAGTTATT+AGG | + | chr4_2:67573116-67573135 | Msa0617170:CDS | 30.0% | |
| AACTGAGGATGAAGTTATTA+GGG | + | chr4_2:67573117-67573136 | Msa0617170:CDS | 30.0% | |
| !! | TCTTTGTAGCATTGACATTT+CGG | + | chr4_2:67573298-67573317 | Msa0617170:intron | 30.0% |
| GTGTTTGATACTAATACATG+TGG | + | chr4_2:67573337-67573356 | Msa0617170:intron | 30.0% | |
| ACATTGTAACTTTGTGAAAG+TGG | - | chr4_2:67573378-67573397 | None:intergenic | 30.0% | |
| AGTTACAATGTCAGTATATG+TGG | + | chr4_2:67573387-67573406 | Msa0617170:intron | 30.0% | |
| ! | TTTTGTCATCAAAGCCATTT+AGG | + | chr4_2:67573560-67573579 | Msa0617170:CDS | 30.0% |
| TTTGTCATCAAAGCCATTTA+GGG | + | chr4_2:67573561-67573580 | Msa0617170:CDS | 30.0% | |
| ! | AAAGATGCAGCATTTTCATA+AGG | + | chr4_2:67573648-67573667 | Msa0617170:CDS | 30.0% |
| CCTATTCATTATCCATTTCT+CGG | - | chr4_2:67573848-67573867 | None:intergenic | 30.0% | |
| GAGCTTATGATCAAAATTAC+CGG | - | chr4_2:67573953-67573972 | None:intergenic | 30.0% | |
| TCCTTTAAATCTTTGCTTTG+GGG | - | chr4_2:67574129-67574148 | None:intergenic | 30.0% | |
| CTTCCTTTAAATCTTTGCTT+TGG | - | chr4_2:67574131-67574150 | None:intergenic | 30.0% | |
| !! | TTGAAGGCATTGATGAAATT+GGG | - | chr4_2:67574541-67574560 | None:intergenic | 30.0% |
| GAAGAAAGTAAAAAATCTGC+TGG | + | chr4_2:67574752-67574771 | Msa0617170:CDS | 30.0% | |
| AGGAAATCAAAATTCAAGCA+TGG | + | chr4_2:67574960-67574979 | Msa0617170:CDS | 30.0% | |
| GGAAATCAAAATTCAAGCAT+GGG | + | chr4_2:67574961-67574980 | Msa0617170:CDS | 30.0% | |
| CTTGAAAAGCTTTCATAAGT+TGG | - | chr4_2:67575153-67575172 | None:intergenic | 30.0% | |
| TGCAATGTGAATTTAGAGAT+AGG | + | chr4_2:67575395-67575414 | Msa0617170:intron | 30.0% | |
| AATGGTGAAAAAGATTGCTA+TGG | + | chr4_2:67575529-67575548 | Msa0617170:CDS | 30.0% | |
| CACGTAATGTAATTGGAATA+GGG | - | chr4_2:67575662-67575681 | None:intergenic | 30.0% | |
| ACACGTAATGTAATTGGAAT+AGG | - | chr4_2:67575663-67575682 | None:intergenic | 30.0% | |
| CTGTGAGATATATAACATTG+TGG | + | chr4_2:67575692-67575711 | Msa0617170:exon | 30.0% | |
| TCAGGTGTTTGAAAATTACA+AGG | - | chr4_2:67575811-67575830 | None:intergenic | 30.0% | |
| ATTAGAGCAAACAACTCAAT+TGG | - | chr4_2:67575907-67575926 | None:intergenic | 30.0% | |
| ! | TAGGGACATTTTATATGCTA+AGG | + | chr4_2:67575999-67576018 | Msa0617170:three_prime_UTR | 30.0% |
| !! | AGAAGTGTTTGTGTTGTGTT+GGG | - | chr4_2:67572109-67572128 | None:intergenic | 35.0% |
| !! | AAGAAGTGTTTGTGTTGTGT+TGG | - | chr4_2:67572110-67572129 | None:intergenic | 35.0% |
| AGAGAAAGAGAAAGATCCAA+TGG | + | chr4_2:67572338-67572357 | Msa0617170:exon | 35.0% | |
| ! | TGATGTTTCTACTGCTTGAA+TGG | + | chr4_2:67572572-67572591 | Msa0617170:intron | 35.0% |
| !! | TGTTGCTTCCTTTACTTTTG+TGG | + | chr4_2:67572771-67572790 | Msa0617170:intron | 35.0% |
| !! | TCCTTTACTTTTGTGGTCAA+TGG | + | chr4_2:67572778-67572797 | Msa0617170:intron | 35.0% |
| TCCATTGACCACAAAAGTAA+AGG | - | chr4_2:67572782-67572801 | None:intergenic | 35.0% | |
| AACTTCATCCTCAGTTTACT+AGG | - | chr4_2:67573113-67573132 | None:intergenic | 35.0% | |
| !! | TGTTCTAGAAGAGTTACTGT+TGG | - | chr4_2:67573162-67573181 | None:intergenic | 35.0% |
| AGTAGGCTATTGACAAATTC+AGG | - | chr4_2:67573206-67573225 | None:intergenic | 35.0% | |
| GATGACAACCTTGATTATGA+AGG | + | chr4_2:67573236-67573255 | Msa0617170:intron | 35.0% | |
| ACAACCTTGATTATGAAGGT+TGG | + | chr4_2:67573240-67573259 | Msa0617170:intron | 35.0% | |
| ATAGCCAACCTTCATAATCA+AGG | - | chr4_2:67573247-67573266 | None:intergenic | 35.0% | |
| CATTAGACAACATTTATCCC+AGG | + | chr4_2:67573445-67573464 | Msa0617170:intron | 35.0% | |
| ! | CGTAGGATTTTGTATCCTTT+TGG | + | chr4_2:67573490-67573509 | Msa0617170:intron | 35.0% |
| GATGACAAAACTTCTAAGCT+TGG | - | chr4_2:67573550-67573569 | None:intergenic | 35.0% | |
| ! | CATTTTCATAAGGTTGACAC+TGG | + | chr4_2:67573658-67573677 | Msa0617170:CDS | 35.0% |
| CCGAGAAATGGATAATGAAT+AGG | + | chr4_2:67573845-67573864 | Msa0617170:CDS | 35.0% | |
| ACCAACATCACATTCACATA+TGG | + | chr4_2:67574017-67574036 | Msa0617170:CDS | 35.0% | |
| TCCCCAAAGCAAAGATTTAA+AGG | + | chr4_2:67574125-67574144 | Msa0617170:CDS | 35.0% | |
| ACAAGTATAGATGACCAAAC+AGG | + | chr4_2:67574177-67574196 | Msa0617170:CDS | 35.0% | |
| AGATCTTCAACATACCTGTT+TGG | - | chr4_2:67574194-67574213 | None:intergenic | 35.0% | |
| !! | GTTGAAGGCATTGATGAAAT+TGG | - | chr4_2:67574542-67574561 | None:intergenic | 35.0% |
| ! | CTGTTTTCATTTCGAAACTG+TGG | - | chr4_2:67574620-67574639 | None:intergenic | 35.0% |
| GCTTGGGAAAATGAATATTG+CGG | + | chr4_2:67574709-67574728 | Msa0617170:CDS | 35.0% | |
| !! | TCAGGTTTACTTTTGTCTAG+AGG | - | chr4_2:67574892-67574911 | None:intergenic | 35.0% |
| TCTCATTTCGGCTTCTAATT+TGG | - | chr4_2:67575002-67575021 | None:intergenic | 35.0% | |
| ! | CTTTTGCAGAGTCTATTGAT+TGG | + | chr4_2:67575040-67575059 | Msa0617170:intron | 35.0% |
| TCCAATTACATTACGTGTTG+TGG | + | chr4_2:67575665-67575684 | Msa0617170:CDS | 35.0% | |
| GGTGAAAAGATAAGCAATCT+TGG | - | chr4_2:67575740-67575759 | None:intergenic | 35.0% | |
| ! | TGCTTATCTTTTCACCTTGA+AGG | + | chr4_2:67575744-67575763 | Msa0617170:three_prime_UTR | 35.0% |
| ! | ATCTTTTCACCTTGAAGGAT+AGG | + | chr4_2:67575749-67575768 | Msa0617170:three_prime_UTR | 35.0% |
| ! | TCTTTTCACCTTGAAGGATA+GGG | + | chr4_2:67575750-67575769 | Msa0617170:three_prime_UTR | 35.0% |
| AAGTCAATGTCCCATAAGTA+TGG | + | chr4_2:67575964-67575983 | Msa0617170:three_prime_UTR | 35.0% | |
| TCTATTCTCTCGTACTCCAT+TGG | - | chr4_2:67572357-67572376 | None:intergenic | 40.0% | |
| !! | GAATGTTGGTAACAAACCTG+AGG | - | chr4_2:67572384-67572403 | None:intergenic | 40.0% |
| GGGAAAAGGGAGAGAAAAAA+AGG | + | chr4_2:67572838-67572857 | Msa0617170:intron | 40.0% | |
| ! | TTCTGAGGAAAACGGTGATA+TGG | + | chr4_2:67572911-67572930 | Msa0617170:intron | 40.0% |
| TCTGAGGAAAACGGTGATAT+GGG | + | chr4_2:67572912-67572931 | Msa0617170:intron | 40.0% | |
| !! | TGCTTTTTAAACCTGCAGAC+TGG | + | chr4_2:67573077-67573096 | Msa0617170:intron | 40.0% |
| GAGAAATTATTCCAGTCTGC+AGG | - | chr4_2:67573091-67573110 | None:intergenic | 40.0% | |
| TGTCATCGTTAGAGGAAAGT+AGG | - | chr4_2:67573223-67573242 | None:intergenic | 40.0% | |
| ATCAAGGTTGTCATCGTTAG+AGG | - | chr4_2:67573231-67573250 | None:intergenic | 40.0% | |
| TCTAAGCTTGGAGATGTAAC+TGG | - | chr4_2:67573538-67573557 | None:intergenic | 40.0% | |
| ATCAAAGCCATTTAGGGATG+CGG | + | chr4_2:67573567-67573586 | Msa0617170:CDS | 40.0% | |
| GAACTGTTTCCTTTAGTCTC+TGG | - | chr4_2:67573600-67573619 | None:intergenic | 40.0% | |
| ACTAAAGGAAACAGTTCCCA+TGG | + | chr4_2:67573603-67573622 | Msa0617170:CDS | 40.0% | |
| GAAACAGTTCCCATGGAAAA+TGG | + | chr4_2:67573610-67573629 | Msa0617170:CDS | 40.0% | |
| ! | CCTGTGTTACCATTTTCCAT+GGG | - | chr4_2:67573622-67573641 | None:intergenic | 40.0% |
| ! | TCCTGTGTTACCATTTTCCA+TGG | - | chr4_2:67573623-67573642 | None:intergenic | 40.0% |
| AAGTTCGAGCACAATTCATC+CGG | + | chr4_2:67573681-67573700 | Msa0617170:CDS | 40.0% | |
| !! | TCCAGTTTCGAGTTTGACAA+AGG | + | chr4_2:67573754-67573773 | Msa0617170:CDS | 40.0% |
| !! | CCAGTTTCGAGTTTGACAAA+GGG | + | chr4_2:67573755-67573774 | Msa0617170:CDS | 40.0% |
| !! | CAGTTTCGAGTTTGACAAAG+GGG | + | chr4_2:67573756-67573775 | Msa0617170:CDS | 40.0% |
| CTACTTACATGATTGCTCAC+CGG | - | chr4_2:67573787-67573806 | None:intergenic | 40.0% | |
| AGAAGGAATAGGTCTCAACA+GGG | - | chr4_2:67573812-67573831 | None:intergenic | 40.0% | |
| TAGAAGGAATAGGTCTCAAC+AGG | - | chr4_2:67573813-67573832 | None:intergenic | 40.0% | |
| TGAGACCTATTCCTTCTAAG+TGG | + | chr4_2:67573815-67573834 | Msa0617170:CDS | 40.0% | |
| TCGTTCCACTTAGAAGGAAT+AGG | - | chr4_2:67573823-67573842 | None:intergenic | 40.0% | |
| AAATCGCTTGCCAACAAGTA+TGG | + | chr4_2:67573909-67573928 | Msa0617170:CDS | 40.0% | |
| TGATCAAAATTACCGGACTC+TGG | - | chr4_2:67573946-67573965 | None:intergenic | 40.0% | |
| GCCATATGTGAATGTGATGT+TGG | - | chr4_2:67574021-67574040 | None:intergenic | 40.0% | |
| TGTTCCATCTGATGCTCATT+CGG | + | chr4_2:67574059-67574078 | Msa0617170:CDS | 40.0% | |
| TCTAATGATGCAGCATTTCC+CGG | + | chr4_2:67574407-67574426 | Msa0617170:intron | 40.0% | |
| ATGGCAACAGATCTTATACC+GGG | - | chr4_2:67574428-67574447 | None:intergenic | 40.0% | |
| CATGGCAACAGATCTTATAC+CGG | - | chr4_2:67574429-67574448 | None:intergenic | 40.0% | |
| ATCTGTTGCCATGAGAGATA+TGG | + | chr4_2:67574436-67574455 | Msa0617170:CDS | 40.0% | |
| TCTGTTGCCATGAGAGATAT+GGG | + | chr4_2:67574437-67574456 | Msa0617170:CDS | 40.0% | |
| GAAAATGAATATTGCGGCGT+GGG | + | chr4_2:67574715-67574734 | Msa0617170:CDS | 40.0% | |
| GTTCTTTAGTATCTGTGTCG+CGG | - | chr4_2:67574778-67574797 | None:intergenic | 40.0% | |
| !! | TTGAAAAACGTGCTGCTTTG+TGG | + | chr4_2:67574813-67574832 | Msa0617170:CDS | 40.0% |
| !! | TGAAAAACGTGCTGCTTTGT+GGG | + | chr4_2:67574814-67574833 | Msa0617170:CDS | 40.0% |
| AACTTGCAGATTAAAGCGTG+AGG | + | chr4_2:67574940-67574959 | Msa0617170:intron | 40.0% | |
| TACCTCGGTTCTTCTCATTT+CGG | - | chr4_2:67575014-67575033 | None:intergenic | 40.0% | |
| ! | CTGCAAAAGTATGACTACCT+CGG | - | chr4_2:67575029-67575048 | None:intergenic | 40.0% |
| ! | GCACGAGTTGAAATTAGCTT+AGG | - | chr4_2:67575275-67575294 | None:intergenic | 40.0% |
| TGCTCTCATTTGCTCAACTT+TGG | - | chr4_2:67575495-67575514 | None:intergenic | 40.0% | |
| AGCACAGACACATGCAAAAA+TGG | + | chr4_2:67575511-67575530 | Msa0617170:CDS | 40.0% | |
| TGAAAAAGATTGCTATGGCG+AGG | + | chr4_2:67575534-67575553 | Msa0617170:CDS | 40.0% | |
| CAGAATACATACGCCAAACA+GGG | + | chr4_2:67575630-67575649 | Msa0617170:CDS | 40.0% | |
| !! | AATAGGGCATTTTCCCTGTT+TGG | - | chr4_2:67575646-67575665 | None:intergenic | 40.0% |
| GCCACAACACGTAATGTAAT+TGG | - | chr4_2:67575669-67575688 | None:intergenic | 40.0% | |
| ATTACATTACGTGTTGTGGC+TGG | + | chr4_2:67575669-67575688 | Msa0617170:CDS | 40.0% | |
| TCCCATAAGTATGGTGTAAG+AGG | + | chr4_2:67575973-67575992 | Msa0617170:three_prime_UTR | 40.0% | |
| GCCTCTTACACCATACTTAT+GGG | - | chr4_2:67575977-67575996 | None:intergenic | 40.0% | |
| AGCCTCTTACACCATACTTA+TGG | - | chr4_2:67575978-67575997 | None:intergenic | 40.0% | |
| GAGAGAGTTGGAGAAAGAAG+AGG | - | chr4_2:67572133-67572152 | None:intergenic | 45.0% | |
| GAAAGAGAGAGAGAGAGAGT+TGG | - | chr4_2:67572145-67572164 | None:intergenic | 45.0% | |
| CGAGAGAATAGAGAAACCTC+AGG | + | chr4_2:67572365-67572384 | Msa0617170:CDS | 45.0% | |
| CAGCCCAGAAGATGAAATCA+AGG | - | chr4_2:67572412-67572431 | None:intergenic | 45.0% | |
| ATTGTTTGATGCGCGGGAAA+AGG | + | chr4_2:67572824-67572843 | Msa0617170:intron | 45.0% | |
| TTGTTTGATGCGCGGGAAAA+GGG | + | chr4_2:67572825-67572844 | Msa0617170:intron | 45.0% | |
| TTTGGGGGTGAGTAAGAAAG+TGG | + | chr4_2:67572942-67572961 | Msa0617170:intron | 45.0% | |
| GGATGAAGTTATTAGGGCCT+AGG | + | chr4_2:67573123-67573142 | Msa0617170:CDS | 45.0% | |
| GTTATTAGGGCCTAGGAAGA+AGG | + | chr4_2:67573130-67573149 | Msa0617170:CDS | 45.0% | |
| TTGGATCCATCCTTCTTCCT+AGG | - | chr4_2:67573143-67573162 | None:intergenic | 45.0% | |
| !! | CTTCTAGAACATCCCCTTCA+AGG | + | chr4_2:67573171-67573190 | Msa0617170:intron | 45.0% |
| ACACAAACACAGCACAACCT+GGG | - | chr4_2:67573465-67573484 | None:intergenic | 45.0% | |
| CTGTGTTTGTGTGTGATCGT+AGG | + | chr4_2:67573473-67573492 | Msa0617170:intron | 45.0% | |
| AGCTTGGAGATGTAACTGGA+AGG | - | chr4_2:67573534-67573553 | None:intergenic | 45.0% | |
| CCCATGGAAAATGGTAACAC+AGG | + | chr4_2:67573619-67573638 | Msa0617170:CDS | 45.0% | |
| TCATCTTCTGTTGTCCTCAC+CGG | - | chr4_2:67573703-67573722 | None:intergenic | 45.0% | |
| CCCTTTGTCAAACTCGAAAC+TGG | - | chr4_2:67573758-67573777 | None:intergenic | 45.0% | |
| ! | TTGTTGGCAAGCGATTTGCT+TGG | - | chr4_2:67573906-67573925 | None:intergenic | 45.0% |
| CTTGCCAACAAGTATGGCAA+GGG | + | chr4_2:67573915-67573934 | Msa0617170:CDS | 45.0% | |
| ACAACCCTTGCCATACTTGT+TGG | - | chr4_2:67573922-67573941 | None:intergenic | 45.0% | |
| TTTCTGCAACCTTGCTTGTC+GGG | - | chr4_2:67573975-67573994 | None:intergenic | 45.0% | |
| GTTTCTGCAACCTTGCTTGT+CGG | - | chr4_2:67573976-67573995 | None:intergenic | 45.0% | |
| GAAACCGAATGAGCATCAGA+TGG | - | chr4_2:67574066-67574085 | None:intergenic | 45.0% | |
| TCTGATGCTCATTCGGTTTC+TGG | + | chr4_2:67574066-67574085 | Msa0617170:CDS | 45.0% | |
| ACATGGAAAACCACCTGTAG+TGG | + | chr4_2:67574095-67574114 | Msa0617170:CDS | 45.0% | |
| GGAAAAGATTCCACTACAGG+TGG | - | chr4_2:67574108-67574127 | None:intergenic | 45.0% | |
| TGGGGAAAAGATTCCACTAC+AGG | - | chr4_2:67574111-67574130 | None:intergenic | 45.0% | |
| CTCAGTTCCCATATCTCTCA+TGG | - | chr4_2:67574447-67574466 | None:intergenic | 45.0% | |
| !! | AAGGTTCTTGACTTGGCAAC+GGG | - | chr4_2:67574475-67574494 | None:intergenic | 45.0% |
| !! | GAAGGTTCTTGACTTGGCAA+CGG | - | chr4_2:67574476-67574495 | None:intergenic | 45.0% |
| GATGAAATTGGGCTGCGAAT+TGG | - | chr4_2:67574530-67574549 | None:intergenic | 45.0% | |
| CATCAATGCCTTCAACTCCT+AGG | + | chr4_2:67574546-67574565 | Msa0617170:CDS | 45.0% | |
| TCGAAACTGTGGATCCTCAT+CGG | - | chr4_2:67574609-67574628 | None:intergenic | 45.0% | |
| TTTCCCAAGCTGCATACCAA+GGG | - | chr4_2:67574699-67574718 | None:intergenic | 45.0% | |
| ! | TTTTCCCAAGCTGCATACCA+AGG | - | chr4_2:67574700-67574719 | None:intergenic | 45.0% |
| GGAAAATGAATATTGCGGCG+TGG | + | chr4_2:67574714-67574733 | Msa0617170:CDS | 45.0% | |
| GCAGAATACATACGCCAAAC+AGG | + | chr4_2:67575629-67575648 | Msa0617170:CDS | 45.0% | |
| AGTATGGTGTAAGAGGCTGT+AGG | + | chr4_2:67575980-67575999 | Msa0617170:three_prime_UTR | 45.0% | |
| GTATGGTGTAAGAGGCTGTA+GGG | + | chr4_2:67575981-67576000 | Msa0617170:three_prime_UTR | 45.0% | |
| TTAGGGCCTAGGAAGAAGGA+TGG | + | chr4_2:67573134-67573153 | Msa0617170:CDS | 50.0% | |
| AACATCCCCTTCAAGGCTTG+AGG | + | chr4_2:67573178-67573197 | Msa0617170:intron | 50.0% | |
| AGGATCCTCAAGCCTTGAAG+GGG | - | chr4_2:67573186-67573205 | None:intergenic | 50.0% | |
| CAGGATCCTCAAGCCTTGAA+GGG | - | chr4_2:67573187-67573206 | None:intergenic | 50.0% | |
| TCAGGATCCTCAAGCCTTGA+AGG | - | chr4_2:67573188-67573207 | None:intergenic | 50.0% | |
| CACACAAACACAGCACAACC+TGG | - | chr4_2:67573466-67573485 | None:intergenic | 50.0% | |
| TCCAGTACCGCATCCCTAAA+TGG | - | chr4_2:67573577-67573596 | None:intergenic | 50.0% | |
| ! | GGTACTGGACCAGAGACTAA+AGG | + | chr4_2:67573588-67573607 | Msa0617170:CDS | 50.0% |
| GTTTGACAAAGGGGAGAGAC+CGG | + | chr4_2:67573765-67573784 | Msa0617170:CDS | 50.0% | |
| TCGGCATCGTTCCACTTAGA+AGG | - | chr4_2:67573829-67573848 | None:intergenic | 50.0% | |
| AGTGGAACGATGCCGAGAAA+TGG | + | chr4_2:67573833-67573852 | Msa0617170:CDS | 50.0% | |
| GCTTGCCAACAAGTATGGCA+AGG | + | chr4_2:67573914-67573933 | Msa0617170:CDS | 50.0% | |
| TCATAAGCTCCCGACAAGCA+AGG | + | chr4_2:67573963-67573982 | Msa0617170:CDS | 50.0% | |
| !! | TCGGTTTCTGGTCAAGCACA+TGG | + | chr4_2:67574078-67574097 | Msa0617170:CDS | 50.0% |
| ! | TGCTGCAGCAAGAAGTGCAA+AGG | - | chr4_2:67574324-67574343 | None:intergenic | 50.0% |
| !! | AGGTTCTTGACTTGGCAACG+GGG | - | chr4_2:67574474-67574493 | None:intergenic | 50.0% |
| GTCTGCGAAGGTTCTTGACT+TGG | - | chr4_2:67574482-67574501 | None:intergenic | 50.0% | |
| ! | GACAACCACTCCTGTTGGTT+CGG | + | chr4_2:67574499-67574518 | Msa0617170:CDS | 50.0% |
| ATTGGAGTTGCCGAACCAAC+AGG | - | chr4_2:67574512-67574531 | None:intergenic | 50.0% | |
| ATGCCTTCAACTCCTAGGAG+AGG | + | chr4_2:67574551-67574570 | Msa0617170:CDS | 50.0% | |
| ! | TCATCGGTTGTGTAGCCCAA+AGG | - | chr4_2:67574593-67574612 | None:intergenic | 50.0% |
| TTTGGGCTACACAACCGATG+AGG | + | chr4_2:67574592-67574611 | Msa0617170:CDS | 50.0% | |
| !! | AAAACGTGCTGCTTTGTGGG+AGG | + | chr4_2:67574817-67574836 | Msa0617170:CDS | 50.0% |
| AGCATGGGAAAGTCAGCAGA+AGG | + | chr4_2:67574976-67574995 | Msa0617170:CDS | 50.0% | |
| AGCCGAAATGAGAAGAACCG+AGG | + | chr4_2:67575009-67575028 | Msa0617170:CDS | 50.0% | |
| TTCGACGACCCTATCCTTCA+AGG | - | chr4_2:67575761-67575780 | None:intergenic | 50.0% | |
| CATGTAAGCAACTTGCGCTC+AGG | - | chr4_2:67575829-67575848 | None:intergenic | 50.0% | |
| GCCATTTAGGGATGCGGTAC+TGG | + | chr4_2:67573573-67573592 | Msa0617170:CDS | 55.0% | |
| CGAGCACAATTCATCCGGTG+AGG | + | chr4_2:67573686-67573705 | Msa0617170:CDS | 55.0% | |
| GCAAGGGTTGTTCCAGAGTC+CGG | + | chr4_2:67573931-67573950 | Msa0617170:CDS | 55.0% | |
| ACAGGAGTGGTTGTCTGCGA+AGG | - | chr4_2:67574494-67574513 | None:intergenic | 55.0% | |
| TCGCAGACAACCACTCCTGT+TGG | + | chr4_2:67574494-67574513 | Msa0617170:CDS | 55.0% | |
| AGTTGCCGAACCAACAGGAG+TGG | - | chr4_2:67574507-67574526 | None:intergenic | 55.0% | |
| GCACCTCTCCTAGGAGTTGA+AGG | - | chr4_2:67574557-67574576 | None:intergenic | 55.0% | |
| ! | GTTGTGTAGCCCAAAGGCGT+AGG | - | chr4_2:67574587-67574606 | None:intergenic | 55.0% |
| AGGAGAGAGATTGCAGCCCT+TGG | + | chr4_2:67574680-67574699 | Msa0617170:CDS | 55.0% | |
| CAGCCCTTGGTATGCAGCTT+GGG | + | chr4_2:67574693-67574712 | Msa0617170:CDS | 55.0% | |
| TGCACCAGCTCCTACGCCTT+TGG | + | chr4_2:67574574-67574593 | Msa0617170:CDS | 60.0% | |
| GCACCAGCTCCTACGCCTTT+GGG | + | chr4_2:67574575-67574594 | Msa0617170:CDS | 60.0% | |
| ! | TAGCCCAAAGGCGTAGGAGC+TGG | - | chr4_2:67574581-67574600 | None:intergenic | 60.0% |
| GCAGCCCTTGGTATGCAGCT+TGG | + | chr4_2:67574692-67574711 | Msa0617170:CDS | 60.0% | |
| GGAGCTGGTGCACCTCTCCT+AGG | - | chr4_2:67574566-67574585 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 67572084 | 67576026 | 67572084 | ID=Msa0617170;Name=Msa0617170 |
| chr4_2 | mRNA | 67572084 | 67576026 | 67572084 | ID=Msa0617170-mRNA-1;Parent=Msa0617170;Name=Msa0617170-mRNA-1;_AED=0.06;_eAED=0.06;_QI=273|0.8|0.83|1|1|1|6|329|498 |
| chr4_2 | exon | 67572084 | 67572386 | 67572084 | ID=Msa0617170-mRNA-1:exon:19306;Parent=Msa0617170-mRNA-1 |
| chr4_2 | exon | 67573095 | 67573164 | 67573095 | ID=Msa0617170-mRNA-1:exon:19307;Parent=Msa0617170-mRNA-1 |
| chr4_2 | exon | 67573539 | 67574198 | 67573539 | ID=Msa0617170-mRNA-1:exon:19308;Parent=Msa0617170-mRNA-1 |
| chr4_2 | exon | 67574420 | 67574867 | 67574420 | ID=Msa0617170-mRNA-1:exon:19309;Parent=Msa0617170-mRNA-1 |
| chr4_2 | exon | 67574949 | 67575030 | 67574949 | ID=Msa0617170-mRNA-1:exon:19310;Parent=Msa0617170-mRNA-1 |
| chr4_2 | exon | 67575491 | 67576026 | 67575491 | ID=Msa0617170-mRNA-1:exon:19311;Parent=Msa0617170-mRNA-1 |
| chr4_2 | five_prime_UTR | 67572084 | 67572356 | 67572084 | ID=Msa0617170-mRNA-1:five_prime_utr;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67572357 | 67572386 | 67572357 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67573095 | 67573164 | 67573095 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67573539 | 67574198 | 67573539 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67574420 | 67574867 | 67574420 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67574949 | 67575030 | 67574949 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | CDS | 67575491 | 67575697 | 67575491 | ID=Msa0617170-mRNA-1:cds;Parent=Msa0617170-mRNA-1 |
| chr4_2 | three_prime_UTR | 67575698 | 67576026 | 67575698 | ID=Msa0617170-mRNA-1:three_prime_utr;Parent=Msa0617170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
