AlfalfaGEDB | Msa0179030

M. sativa cultivar zhongmu-4 / Msa0179030

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008616 GO:0009058 GO:0009116 GO:0009119 GO:0009163 GO:0009987 GO:0018130 GO:0019438 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046116 GO:0046483 GO:0055086 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659
PFAM: PF00085.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0179030	XP_013470006.1	99.061	213	2	0	1	213	1	213	6.26e-152	430

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0179030	sp\|O64628\|TXND9_ARATH	77.885	208	45	1	6	213	5	211	1.39e-118	338

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0179030	B7FMC0	99.061	213	2	0	1	213	1	213	2.99e-152	430

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0032810	Msa0179030	0.818334	2.069085e-52	-8.615850e-47
Msa0033880	Msa0179030	0.834778	2.462122e-56	-8.615850e-47
Msa0042280	Msa0179030	0.807072	6.043956e-50	-8.615850e-47
Msa0048180	Msa0179030	0.818959	1.492924e-52	-8.615850e-47
Msa0057610	Msa0179030	0.806343	8.614029e-50	-8.615850e-47
Msa0093010	Msa0179030	0.827526	1.489849e-54	-8.615850e-47
Msa0093850	Msa0179030	0.809067	2.272936e-50	-8.615850e-47
Msa0115370	Msa0179030	0.807279	5.461474e-50	-8.615850e-47
Msa0116130	Msa0179030	0.813131	2.989640e-51	-8.615850e-47
Msa0116380	Msa0179030	0.802458	5.556554e-49	-8.615850e-47
Msa0118710	Msa0179030	0.800106	1.684178e-48	-8.615850e-47
Msa0123510	Msa0179030	0.812747	3.627970e-51	-8.615850e-47
Msa0127850	Msa0179030	0.836892	7.167245e-57	-8.615850e-47
Msa0136320	Msa0179030	0.867072	1.792170e-65	-8.615850e-47
Msa0142410	Msa0179030	0.825549	4.411897e-54	-8.615850e-47
Msa0152870	Msa0179030	0.814024	1.901236e-51	-8.615850e-47
Msa0167480	Msa0179030	0.812124	4.964510e-51	-8.615850e-47
Msa0174000	Msa0179030	0.814974	1.172082e-51	-8.615850e-47
Msa0179030	Msa0188350	0.809664	1.691707e-50	-8.615850e-47
Msa0179030	Msa0189700	0.826415	2.747256e-54	-8.615850e-47
Msa0179030	Msa0202490	0.805380	1.372677e-49	-8.615850e-47
Msa0179030	Msa0209140	0.805705	1.173162e-49	-8.615850e-47
Msa0179030	Msa0218830	0.824143	9.469241e-54	-8.615850e-47
Msa0179030	Msa0220990	0.820174	7.885573e-53	-8.615850e-47
Msa0179030	Msa0221030	0.823310	1.483528e-53	-8.615850e-47
Msa0179030	Msa0223170	0.802505	5.435020e-49	-8.615850e-47
Msa0179030	Msa0224560	0.830854	2.322803e-55	-8.615850e-47
Msa0179030	Msa0230490	0.811781	5.895334e-51	-8.615850e-47
Msa0179030	Msa0230520	0.830658	2.593818e-55	-8.615850e-47
Msa0179030	Msa0231100	0.831125	1.992515e-55	-8.615850e-47
Msa0179030	Msa0232010	0.816681	4.879472e-52	-8.615850e-47
Msa0179030	Msa0232080	0.816906	4.343096e-52	-8.615850e-47
Msa0179030	Msa0241830	0.814432	1.544940e-51	-8.615850e-47
Msa0179030	Msa0244980	0.803813	2.914586e-49	-8.615850e-47
Msa0179030	Msa0245580	0.848430	6.159285e-60	-8.615850e-47
Msa0179030	Msa0249580	0.813743	2.193254e-51	-8.615850e-47
Msa0179030	Msa0258850	0.800297	1.539722e-48	-8.615850e-47
Msa0179030	Msa0261170	0.806402	8.370057e-50	-8.615850e-47
Msa0179030	Msa0262480	0.832697	8.155601e-56	-8.615850e-47
Msa0179030	Msa0269470	0.823737	1.178763e-53	-8.615850e-47
Msa0179030	Msa0270210	0.805034	1.622124e-49	-8.615850e-47
Msa0179030	Msa0284180	0.812150	4.900556e-51	-8.615850e-47
Msa0179030	Msa0296250	0.844155	9.006016e-59	-8.615850e-47
Msa0179030	Msa0300280	0.819706	1.008970e-52	-8.615850e-47
Msa0179030	Msa0300350	0.812839	3.463640e-51	-8.615850e-47
Msa0179030	Msa0304590	0.802795	4.734896e-49	-8.615850e-47
Msa0179030	Msa0304660	0.814525	1.473790e-51	-8.615850e-47
Msa0179030	Msa0305780	0.811960	5.391411e-51	-8.615850e-47
Msa0179030	Msa0320590	0.801659	8.111660e-49	-8.615850e-47
Msa0179030	Msa0322900	0.804353	2.250020e-49	-8.615850e-47
Msa0179030	Msa0331700	0.814628	1.398678e-51	-8.615850e-47
Msa0179030	Msa0332640	0.817595	3.039630e-52	-8.615850e-47
Msa0179030	Msa0341690	0.802563	5.287580e-49	-8.615850e-47
Msa0179030	Msa0348830	0.854833	9.456005e-62	-8.615850e-47
Msa0179030	Msa0371500	0.814657	1.378174e-51	-8.615850e-47
Msa0179030	Msa0419720	0.817550	3.111186e-52	-8.615850e-47
Msa0179030	Msa0423750	0.861392	1.059617e-63	-8.615850e-47
Msa0179030	Msa0443390	0.846695	1.848220e-59	-8.615850e-47
Msa0179030	Msa0456430	0.811799	5.843470e-51	-8.615850e-47
Msa0179030	Msa0469220	0.807503	4.895784e-50	-8.615850e-47
Msa0179030	Msa0511770	0.818925	1.519415e-52	-8.615850e-47
Msa0179030	Msa0527150	0.817583	3.059227e-52	-8.615850e-47
Msa0179030	Msa0531250	0.806750	7.069145e-50	-8.615850e-47
Msa0179030	Msa0531650	0.861254	1.167314e-63	-8.615850e-47
Msa0179030	Msa0534750	0.866430	2.868296e-65	-8.615850e-47
Msa0179030	Msa0547990	0.824975	6.029809e-54	-8.615850e-47
Msa0179030	Msa0581110	0.838663	2.516340e-57	-8.615850e-47
Msa0179030	Msa0588360	0.805516	1.285825e-49	-8.615850e-47
Msa0179030	Msa0590940	0.829910	3.951503e-55	-8.615850e-47
Msa0179030	Msa0593700	0.826475	2.658540e-54	-8.615850e-47
Msa0179030	Msa0615580	0.843088	1.737529e-58	-8.615850e-47
Msa0179030	Msa0628420	0.801127	1.042559e-48	-8.615850e-47
Msa0179030	Msa0633570	0.830518	2.806877e-55	-8.615850e-47
Msa0179030	Msa0644030	0.826498	2.624758e-54	-8.615850e-47
Msa0179030	Msa0666230	0.844364	7.913711e-59	-8.615850e-47
Msa0179030	Msa0669520	0.811637	6.336939e-51	-8.615850e-47
Msa0179030	Msa0672100	0.811126	8.182754e-51	-8.615850e-47
Msa0179030	Msa0706500	0.821535	3.835428e-53	-8.615850e-47
Msa0179030	Msa0729200	0.813371	2.648137e-51	-8.615850e-47
Msa0179030	Msa0769590	0.815130	1.082513e-51	-8.615850e-47
Msa0179030	Msa0785130	0.843010	1.822750e-58	-8.615850e-47
Msa0179030	Msa0806880	0.814050	1.877065e-51	-8.615850e-47
Msa0179030	Msa0808800	0.856040	4.208799e-62	-8.615850e-47
Msa0179030	Msa0817540	0.835534	1.586709e-56	-8.615850e-47
Msa0179030	Msa0867060	0.801623	8.250347e-49	-8.615850e-47
Msa0179030	Msa0881290	0.825605	4.280485e-54	-8.615850e-47
Msa0179030	Msa0888810	0.813689	2.254239e-51	-8.615850e-47
Msa0179030	Msa0943170	0.802604	5.184249e-49	-8.615850e-47
Msa0179030	Msa0992550	0.812990	3.210365e-51	-8.615850e-47
Msa0179030	Msa1019240	0.819462	1.146768e-52	-8.615850e-47
Msa0179030	Msa1019260	0.820888	5.404617e-53	-8.615850e-47
Msa0179030	Msa1030080	0.816007	6.902457e-52	-8.615850e-47
Msa0179030	Msa1039900	0.843810	1.114391e-58	-8.615850e-47
Msa0179030	Msa1042480	0.810851	9.383648e-51	-8.615850e-47
Msa0179030	Msa1072710	0.826861	2.149674e-54	-8.615850e-47
Msa0179030	Msa1104210	0.804779	1.833400e-49	-8.615850e-47
Msa0179030	Msa1123350	0.845188	4.744321e-59	-8.615850e-47
Msa0179030	Msa1126830	0.838832	2.274991e-57	-8.615850e-47
Msa0179030	Msa1127590	0.821735	3.446512e-53	-8.615850e-47
Msa0179030	Msa1165780	0.853871	1.794627e-61	-8.615850e-47
Msa0179030	Msa1166870	0.819712	1.005708e-52	-8.615850e-47
Msa0179030	Msa1175350	0.831243	1.864078e-55	-8.615850e-47
Msa0179030	Msa1202580	0.825095	5.650811e-54	-8.615850e-47
Msa0179030	Msa1208020	0.849982	2.278784e-60	-8.615850e-47
Msa0179030	Msa1230580	0.816249	6.094663e-52	-8.615850e-47
Msa0179030	Msa1262890	0.811676	6.214250e-51	-8.615850e-47
Msa0179030	Msa1264210	0.808419	3.126742e-50	-8.615850e-47
Msa0179030	Msa1329540	0.806903	6.561824e-50	-8.615850e-47
Msa0179030	Msa1330270	0.804325	2.280124e-49	-8.615850e-47
Msa0179030	Msa1331250	0.819742	9.896698e-53	-8.615850e-47
Msa0179030	Msa1338190	0.810755	9.845064e-51	-8.615850e-47
Msa0179030	Msa1343260	0.826529	2.580673e-54	-8.615850e-47
Msa0179030	Msa1349570	0.817275	3.588117e-52	-8.615850e-47
Msa0179030	Msa1351540	0.819975	8.756602e-53	-8.615850e-47
Msa0179030	Msa1362420	0.801795	7.606697e-49	-8.615850e-47
Msa0179030	Msa1369190	0.828051	1.114437e-54	-8.615850e-47
Msa0179030	Msa1369890	0.820649	6.136552e-53	-8.615850e-47
Msa0179030	Msa1373820	0.806960	6.381245e-50	-8.615850e-47
Msa0179030	Msa1374170	0.805225	1.479179e-49	-8.615850e-47
Msa0179030	Msa1382670	0.802859	4.592462e-49	-8.615850e-47
Msa0179030	Msa1391480	0.825538	4.439264e-54	-8.615850e-47
Msa0179030	Msa1398790	0.822550	2.230606e-53	-8.615850e-47
Msa0179030	Msa1411950	0.820926	5.299266e-53	-8.615850e-47
Msa0179030	Msa1413260	0.814075	1.853197e-51	-8.615850e-47
Msa0179030	Msa1413500	0.801001	1.106239e-48	-8.615850e-47
Msa0179030	Msa1421560	0.806971	6.348059e-50	-8.615850e-47
Msa0179030	Msa1425670	0.808459	3.065441e-50	-8.615850e-47
Msa0179030	Msa1426370	0.819331	1.228381e-52	-8.615850e-47
Msa0179030	Msa1426490	0.813840	2.087920e-51	-8.615850e-47
Msa0179030	Msa1435440	0.801898	7.246316e-49	-8.615850e-47
Msa0179030	Msa1450280	0.815714	8.024507e-52	-8.615850e-47
Msa0179030	Msa1456050	0.823116	1.647109e-53	-8.615850e-47
Msa0179030	Msa1462910	0.818863	1.570126e-52	-8.615850e-47
Msa0179030	Msa1465260	0.800464	1.423830e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0179030	MtrunA17_Chr1g0207631	99.061	213	2	0	1	213	1	213	5.76e-156	430
Msa0179030	MtrunA17_Chr8g0372661	42.675	157	88	2	25	180	42	197	2.65e-39	135

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0179030	AT2G18990.1	77.885	208	45	1	6	213	5	211	1.41e-119	338
Msa0179030	AT3G25580.1	77.404	208	45	2	6	213	5	210	1.38e-118	336
Msa0179030	AT3G25580.2	77.073	205	45	2	9	213	3	205	1.30e-116	330
Msa0179030	AT5G66410.1	36.585	205	123	4	7	209	28	227	1.09e-38	133
Msa0179030	AT3G50960.2	42.000	150	85	2	23	171	40	188	4.08e-37	129
Msa0179030	AT3G50960.1	42.000	150	85	2	23	171	40	188	4.08e-37	129

Find 66 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGACAAGCATTTAAGTATTT+TGG	0.171906	1_4:-66458614	Msa0179030:CDS
GTTGCAGCCTCCTTTCTCTT+AGG	0.207376	1_4:+66459278	None:intergenic
TATATGTTGTGTGTTGAATT+TGG	0.230504	1_4:-66457770	None:intergenic
TATCAATTGCCAGTCTTGTT+TGG	0.266888	1_4:-66457976	Msa0179030:three_prime_UTR
GCAAAGGACAAACACATTAA+AGG	0.268507	1_4:+66457879	None:intergenic
TACTGCATAAAAGTAATTCT+TGG	0.286458	1_4:+66457843	None:intergenic
TGACTTTAGCACCGAGGTTT+TGG	0.292143	1_4:-66458301	Msa0179030:CDS
GTCATTTCTTCCGCGAAAAT+TGG	0.299383	1_4:-66459135	Msa0179030:CDS
GTTTGAAGGTTCCTTTGGTT+TGG	0.314749	1_4:+66459506	None:intergenic
CGAAATTGTGCGAACCTTGC+AGG	0.328390	1_4:+66459111	None:intergenic
TTTGAAGGTTCCTTTGGTTT+GGG	0.335692	1_4:+66459507	None:intergenic
TTGCAGCCTCCTTTCTCTTA+GGG	0.338559	1_4:+66459279	None:intergenic
ATCTGAGCTCTCGTCTTTCC+AGG	0.348336	1_4:+66458111	None:intergenic
GCTCTGCCGAACACTTCTTT+TGG	0.354451	1_4:+66458200	None:intergenic
CTTATAGTGATTAGAATCAT+TGG	0.355260	1_4:+66457935	None:intergenic
TCAATACACCGTGCAAGGTC+CGG	0.394040	1_4:-66458231	Msa0179030:CDS
GCTGCAACAAATGAAGAAAA+TGG	0.402598	1_4:-66459263	Msa0179030:CDS
ATGCCGTTTGAAGGTTCCTT+TGG	0.412354	1_4:+66459501	None:intergenic
CTTGATTCTCGATCACCTCT+TGG	0.414878	1_4:+66459386	None:intergenic
CAATACACCGTGCAAGGTCC+GGG	0.431500	1_4:-66458230	Msa0179030:CDS
ATTAATACGATGCCGTTTGA+AGG	0.465904	1_4:+66459492	None:intergenic
AACATTTGCTTCATGACTAC+AGG	0.477196	1_4:+66457812	None:intergenic
GAATCATTGGTACAATCATC+AGG	0.481166	1_4:+66457948	None:intergenic
TTTGCGCCCCGGACCTTGCA+CGG	0.490890	1_4:+66458223	None:intergenic
GTCTTTCTCTGACGGAATCT+CGG	0.495284	1_4:+66459195	None:intergenic
TTCTTTATGAGAGCAATAGT+TGG	0.506238	1_4:+66458505	None:intergenic
CGCAAACCAAAAGAAGTGTT+CGG	0.506657	1_4:-66458206	Msa0179030:CDS
CGGTGTAATCTCCGTGTCCG+AGG	0.513907	1_4:+66459215	None:intergenic
CGTCATCGTCGAGACGTTCA+AGG	0.517999	1_4:+66459311	None:intergenic
ATCTTGAAGCCCTAAGAGAA+AGG	0.527404	1_4:-66459288	Msa0179030:CDS
CGAAGCAGCATATTGAGACT+CGG	0.534134	1_4:-66458591	Msa0179030:CDS
CAGGATAATCCAAACAAGAC+TGG	0.541989	1_4:+66457967	None:intergenic
GACGGTGGCGCAAGCAGTCG+AGG	0.556072	1_4:-66459359	Msa0179030:CDS
TGGTATTAGCACATTTGCAA+AGG	0.556981	1_4:+66457863	None:intergenic
CCGCGAAAATTGGCCCTGCA+AGG	0.557879	1_4:-66459125	Msa0179030:intron
TACCAAAGTGGATGATTATG+TGG	0.558275	1_4:-66458482	Msa0179030:intron
AAACCAAAGGAACCTTCAAA+CGG	0.561017	1_4:-66459504	Msa0179030:five_prime_UTR
GAAATTGTGCGAACCTTGCA+GGG	0.562815	1_4:+66459112	None:intergenic
GTCATCGTCGAGACGTTCAA+GGG	0.565214	1_4:+66459312	None:intergenic
GAGAAGAAGTCTTTCTCTGA+CGG	0.577836	1_4:+66459187	None:intergenic
AATCATCAATACACCGTGCA+AGG	0.579819	1_4:-66458236	Msa0179030:CDS
CGTTGGATCTCCCTCGGACA+CGG	0.582223	1_4:-66459226	Msa0179030:CDS
TACCACATAATCATCCACTT+TGG	0.582640	1_4:+66458480	None:intergenic
CGTAGCCGTTGGATCTCCCT+CGG	0.582964	1_4:-66459232	Msa0179030:CDS
TGGCGGAGAAGCGTAGCCGT+TGG	0.601854	1_4:-66459243	Msa0179030:CDS
CAATCTTTCTTCCAAAACCT+CGG	0.602383	1_4:+66458290	None:intergenic
AATTTAGAAAGACACACAAA+CGG	0.604177	1_4:+66458062	None:intergenic
ACGATCACTTGCTTTAACGA+CGG	0.607682	1_4:+66459165	None:intergenic
GGTGTAATCTCCGTGTCCGA+GGG	0.608291	1_4:+66459216	None:intergenic
TACAAGTTACTCAGAATCTG+AGG	0.610014	1_4:+66458164	None:intergenic
GAACTCAAAGTGCAGAGCGA+GGG	0.616104	1_4:-66459461	Msa0179030:five_prime_UTR
GAGCTCTCGTCTTTCCAGGA+GGG	0.622232	1_4:+66458115	None:intergenic
TGAGCTCTCGTCTTTCCAGG+AGG	0.628602	1_4:+66458114	None:intergenic
CGTGTCCGAGGGAGATCCAA+CGG	0.633581	1_4:+66459227	None:intergenic
TGAACTCAAAGTGCAGAGCG+AGG	0.639978	1_4:-66459462	Msa0179030:five_prime_UTR
TGAAATCTATCCCAAACCAA+AGG	0.640870	1_4:-66459517	Msa0179030:five_prime_UTR
AATACACCGTGCAAGGTCCG+GGG	0.655774	1_4:-66458229	Msa0179030:CDS
GATCGAGAATCAAGTACTGA+CGG	0.657827	1_4:-66459377	Msa0179030:CDS
TCTCATAAAGAATACCAAAG+TGG	0.658073	1_4:-66458494	Msa0179030:CDS
TTGAAGCCCTAAGAGAAAGG+AGG	0.672465	1_4:-66459285	Msa0179030:CDS
TACTGATGACTTTAGCACCG+AGG	0.705317	1_4:-66458307	Msa0179030:CDS
GCAACAAATGAAGAAAATGG+CGG	0.709368	1_4:-66459260	Msa0179030:CDS
AAGTGTTCGGCAGAGCACAA+CGG	0.717985	1_4:-66458193	Msa0179030:CDS
GGACAAAGGAAAGATCCAAG+AGG	0.724397	1_4:-66459401	Msa0179030:CDS
AAACTTACAAGACACACGAG+TGG	0.733578	1_4:+66458027	None:intergenic
CGAGAATCAAGTACTGACGG+TGG	0.737424	1_4:-66459374	Msa0179030:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAACTTTTTAATTTAATAAA+AGG	-	chr1_4:66457787-66457806	Msa0179030:three_prime_UTR	10.0%
!!	GAACTTTATAAAAATATTAT+TGG	-	chr1_4:66458527-66458546	Msa0179030:CDS	10.0%
!!!	GAACTTTTTAATTTAATAAA+AGG	-	chr1_4:66457787-66457806	Msa0179030:three_prime_UTR	10.0%
!!	GAACTTTATAAAAATATTAT+TGG	-	chr1_4:66458527-66458546	Msa0179030:CDS	10.0%
!!	CTCTCAAAAAATAAAATAAA+AGG	-	chr1_4:66457819-66457838	Msa0179030:three_prime_UTR	15.0%
!!	AAAAAATAAAATAAAAGGAG+AGG	-	chr1_4:66457824-66457843	Msa0179030:three_prime_UTR	15.0%
!!!	AAGAATTTTAATTTAAACGT+AGG	-	chr1_4:66458505-66458524	Msa0179030:CDS	15.0%
!!	CTCTCAAAAAATAAAATAAA+AGG	-	chr1_4:66457819-66457838	Msa0179030:three_prime_UTR	15.0%
!!	AAAAAATAAAATAAAAGGAG+AGG	-	chr1_4:66457824-66457843	Msa0179030:three_prime_UTR	15.0%
!!!	AAGAATTTTAATTTAAACGT+AGG	-	chr1_4:66458505-66458524	Msa0179030:CDS	15.0%
!!	ACATGTGATTACATAATTAT+CGG	-	chr1_4:66458391-66458410	Msa0179030:intron	20.0%
!!	TAGAATTATCTGTTTATCAT+TGG	-	chr1_4:66458622-66458641	Msa0179030:CDS	20.0%
!!!	TGTCTAAATTTTGTTTTTGT+TGG	-	chr1_4:66459301-66459320	Msa0179030:CDS	20.0%
!!!	CTTTCTAAATTTAGTTTTGT+TGG	-	chr1_4:66459336-66459355	Msa0179030:CDS	20.0%
!!	ACATGTGATTACATAATTAT+CGG	-	chr1_4:66458391-66458410	Msa0179030:intron	20.0%
!!	TAGAATTATCTGTTTATCAT+TGG	-	chr1_4:66458622-66458641	Msa0179030:CDS	20.0%
!!!	TGTCTAAATTTTGTTTTTGT+TGG	-	chr1_4:66459301-66459320	Msa0179030:CDS	20.0%
!!!	CTTTCTAAATTTAGTTTTGT+TGG	-	chr1_4:66459336-66459355	Msa0179030:CDS	20.0%
!	AATTATGTAATCACATGTGT+AGG	+	chr1_4:66458389-66458408	None:intergenic	25.0%
!	AATTATCTGTTTATCATTGG+AGG	-	chr1_4:66458625-66458644	Msa0179030:intron	25.0%
!	ATTATCTGTTTATCATTGGA+GGG	-	chr1_4:66458626-66458645	Msa0179030:intron	25.0%
!	ATATAAAAACTGTAAGTCTG+CGG	+	chr1_4:66458696-66458715	None:intergenic	25.0%
!	TATTGACATGAATGCTATAT+TGG	-	chr1_4:66458968-66458987	Msa0179030:intron	25.0%
!	TACTAACATCAAGATGATAA+TGG	-	chr1_4:66459021-66459040	Msa0179030:intron	25.0%
!!!	ATGATAATGGTATGTGTTTT+AGG	-	chr1_4:66459034-66459053	Msa0179030:intron	25.0%
!	AATTTAGAAAGACACACAAA+CGG	+	chr1_4:66459327-66459346	None:intergenic	25.0%
!	CTTATAGTGATTAGAATCAT+TGG	+	chr1_4:66459454-66459473	None:intergenic	25.0%
!!!	TAATACTAAGAGTTTTGAGA+TGG	-	chr1_4:66459474-66459493	Msa0179030:five_prime_UTR	25.0%
!	TACTGCATAAAAGTAATTCT+TGG	+	chr1_4:66459546-66459565	None:intergenic	25.0%
!	AATTATGTAATCACATGTGT+AGG	+	chr1_4:66458389-66458408	None:intergenic	25.0%
!	AATTATCTGTTTATCATTGG+AGG	-	chr1_4:66458625-66458644	Msa0179030:intron	25.0%
!	ATTATCTGTTTATCATTGGA+GGG	-	chr1_4:66458626-66458645	Msa0179030:intron	25.0%
!	ATATAAAAACTGTAAGTCTG+CGG	+	chr1_4:66458696-66458715	None:intergenic	25.0%
!	TATTGACATGAATGCTATAT+TGG	-	chr1_4:66458968-66458987	Msa0179030:intron	25.0%
!	TACTAACATCAAGATGATAA+TGG	-	chr1_4:66459021-66459040	Msa0179030:intron	25.0%
!!!	ATGATAATGGTATGTGTTTT+AGG	-	chr1_4:66459034-66459053	Msa0179030:intron	25.0%
!	AATTTAGAAAGACACACAAA+CGG	+	chr1_4:66459327-66459346	None:intergenic	25.0%
!	CTTATAGTGATTAGAATCAT+TGG	+	chr1_4:66459454-66459473	None:intergenic	25.0%
!!!	TAATACTAAGAGTTTTGAGA+TGG	-	chr1_4:66459474-66459493	Msa0179030:five_prime_UTR	25.0%
!	TACTGCATAAAAGTAATTCT+TGG	+	chr1_4:66459546-66459565	None:intergenic	25.0%
	AGATCTAGGAGTGAAAAAAA+TGG	-	chr1_4:66457964-66457983	Msa0179030:three_prime_UTR	30.0%
	TGATTACATAATTATCGGTG+TGG	-	chr1_4:66458396-66458415	Msa0179030:intron	30.0%
	CGGAATTCAAATTCAAATTG+TGG	+	chr1_4:66458676-66458695	None:intergenic	30.0%
!	TATTTTCTTACGCTGAAATG+AGG	-	chr1_4:66458713-66458732	Msa0179030:intron	30.0%
!	GGACAAGCATTTAAGTATTT+TGG	-	chr1_4:66458772-66458791	Msa0179030:intron	30.0%
	TTCTTTATGAGAGCAATAGT+TGG	+	chr1_4:66458884-66458903	None:intergenic	30.0%
	TCTCATAAAGAATACCAAAG+TGG	-	chr1_4:66458892-66458911	Msa0179030:intron	30.0%
	ATTATGTGGTATGTGCTTAA+AGG	-	chr1_4:66458918-66458937	Msa0179030:intron	30.0%
!!	ATAATGGTATGTGTTTTAGG+TGG	-	chr1_4:66459037-66459056	Msa0179030:intron	30.0%
!!	TAATGGTATGTGTTTTAGGT+GGG	-	chr1_4:66459038-66459057	Msa0179030:intron	30.0%
!	TAAAGCTCAAGTCATCTTTT+TGG	-	chr1_4:66459121-66459140	Msa0179030:intron	30.0%
	AGATCTAGGAGTGAAAAAAA+TGG	-	chr1_4:66457964-66457983	Msa0179030:three_prime_UTR	30.0%
	TGATTACATAATTATCGGTG+TGG	-	chr1_4:66458396-66458415	Msa0179030:intron	30.0%
	CGGAATTCAAATTCAAATTG+TGG	+	chr1_4:66458676-66458695	None:intergenic	30.0%
!	TATTTTCTTACGCTGAAATG+AGG	-	chr1_4:66458713-66458732	Msa0179030:intron	30.0%
!	GGACAAGCATTTAAGTATTT+TGG	-	chr1_4:66458772-66458791	Msa0179030:intron	30.0%
	TTCTTTATGAGAGCAATAGT+TGG	+	chr1_4:66458884-66458903	None:intergenic	30.0%
	TCTCATAAAGAATACCAAAG+TGG	-	chr1_4:66458892-66458911	Msa0179030:intron	30.0%
	ATTATGTGGTATGTGCTTAA+AGG	-	chr1_4:66458918-66458937	Msa0179030:intron	30.0%
!!	ATAATGGTATGTGTTTTAGG+TGG	-	chr1_4:66459037-66459056	Msa0179030:intron	30.0%
!!	TAATGGTATGTGTTTTAGGT+GGG	-	chr1_4:66459038-66459057	Msa0179030:intron	30.0%
!	TAAAGCTCAAGTCATCTTTT+TGG	-	chr1_4:66459121-66459140	Msa0179030:intron	30.0%
	TGAAATCTATCCCAAACCAA+AGG	-	chr1_4:66457869-66457888	Msa0179030:three_prime_UTR	35.0%
!	TTTGAAGGTTCCTTTGGTTT+GGG	+	chr1_4:66457882-66457901	None:intergenic	35.0%
	AAACCAAAGGAACCTTCAAA+CGG	-	chr1_4:66457882-66457901	Msa0179030:three_prime_UTR	35.0%
!	ATTAATACGATGCCGTTTGA+AGG	+	chr1_4:66457897-66457916	None:intergenic	35.0%
	GGAGTGAAAAAAATGGACAA+AGG	-	chr1_4:66457971-66457990	Msa0179030:three_prime_UTR	35.0%
	GCTGCAACAAATGAAGAAAA+TGG	-	chr1_4:66458123-66458142	Msa0179030:three_prime_UTR	35.0%
	GCAACAAATGAAGAAAATGG+CGG	-	chr1_4:66458126-66458145	Msa0179030:three_prime_UTR	35.0%
	ATATTATTGGCAGTGCATAC+TGG	-	chr1_4:66458540-66458559	Msa0179030:CDS	35.0%
	TTGAGCTTCTCAGCTAAAAA+TGG	+	chr1_4:66458848-66458867	None:intergenic	35.0%
	TACCAAAGTGGATGATTATG+TGG	-	chr1_4:66458904-66458923	Msa0179030:intron	35.0%
	TACCACATAATCATCCACTT+TGG	+	chr1_4:66458909-66458928	None:intergenic	35.0%
	ACATGAATGCTATATTGGAC+AGG	-	chr1_4:66458973-66458992	Msa0179030:intron	35.0%
	CATGAATGCTATATTGGACA+GGG	-	chr1_4:66458974-66458993	Msa0179030:intron	35.0%
	CAATCTTTCTTCCAAAACCT+CGG	+	chr1_4:66459099-66459118	None:intergenic	35.0%
	TACAAGTTACTCAGAATCTG+AGG	+	chr1_4:66459225-66459244	None:intergenic	35.0%
!!	TATCAATTGCCAGTCTTGTT+TGG	-	chr1_4:66459410-66459429	Msa0179030:exon	35.0%
	GAATCATTGGTACAATCATC+AGG	+	chr1_4:66459441-66459460	None:intergenic	35.0%
	GCAAAGGACAAACACATTAA+AGG	+	chr1_4:66459510-66459529	None:intergenic	35.0%
	TGGTATTAGCACATTTGCAA+AGG	+	chr1_4:66459526-66459545	None:intergenic	35.0%
	AACATTTGCTTCATGACTAC+AGG	+	chr1_4:66459577-66459596	None:intergenic	35.0%
	TGAAATCTATCCCAAACCAA+AGG	-	chr1_4:66457869-66457888	Msa0179030:three_prime_UTR	35.0%
!	TTTGAAGGTTCCTTTGGTTT+GGG	+	chr1_4:66457882-66457901	None:intergenic	35.0%
	AAACCAAAGGAACCTTCAAA+CGG	-	chr1_4:66457882-66457901	Msa0179030:three_prime_UTR	35.0%
!	ATTAATACGATGCCGTTTGA+AGG	+	chr1_4:66457897-66457916	None:intergenic	35.0%
	GGAGTGAAAAAAATGGACAA+AGG	-	chr1_4:66457971-66457990	Msa0179030:three_prime_UTR	35.0%
	GCTGCAACAAATGAAGAAAA+TGG	-	chr1_4:66458123-66458142	Msa0179030:three_prime_UTR	35.0%
	GCAACAAATGAAGAAAATGG+CGG	-	chr1_4:66458126-66458145	Msa0179030:three_prime_UTR	35.0%
	ATATTATTGGCAGTGCATAC+TGG	-	chr1_4:66458540-66458559	Msa0179030:CDS	35.0%
	TTGAGCTTCTCAGCTAAAAA+TGG	+	chr1_4:66458848-66458867	None:intergenic	35.0%
	TACCAAAGTGGATGATTATG+TGG	-	chr1_4:66458904-66458923	Msa0179030:intron	35.0%
	TACCACATAATCATCCACTT+TGG	+	chr1_4:66458909-66458928	None:intergenic	35.0%
	ACATGAATGCTATATTGGAC+AGG	-	chr1_4:66458973-66458992	Msa0179030:intron	35.0%
	CATGAATGCTATATTGGACA+GGG	-	chr1_4:66458974-66458993	Msa0179030:intron	35.0%
	CAATCTTTCTTCCAAAACCT+CGG	+	chr1_4:66459099-66459118	None:intergenic	35.0%
	TACAAGTTACTCAGAATCTG+AGG	+	chr1_4:66459225-66459244	None:intergenic	35.0%
!!	TATCAATTGCCAGTCTTGTT+TGG	-	chr1_4:66459410-66459429	Msa0179030:exon	35.0%
	GAATCATTGGTACAATCATC+AGG	+	chr1_4:66459441-66459460	None:intergenic	35.0%
	GCAAAGGACAAACACATTAA+AGG	+	chr1_4:66459510-66459529	None:intergenic	35.0%
	TGGTATTAGCACATTTGCAA+AGG	+	chr1_4:66459526-66459545	None:intergenic	35.0%
	AACATTTGCTTCATGACTAC+AGG	+	chr1_4:66459577-66459596	None:intergenic	35.0%
	GTTTGAAGGTTCCTTTGGTT+TGG	+	chr1_4:66457883-66457902	None:intergenic	40.0%
!!	GATCGAGAATCAAGTACTGA+CGG	-	chr1_4:66458009-66458028	Msa0179030:three_prime_UTR	40.0%
	ATCTTGAAGCCCTAAGAGAA+AGG	-	chr1_4:66458098-66458117	Msa0179030:three_prime_UTR	40.0%
	GAGAAGAAGTCTTTCTCTGA+CGG	+	chr1_4:66458202-66458221	None:intergenic	40.0%
	ACGATCACTTGCTTTAACGA+CGG	+	chr1_4:66458224-66458243	None:intergenic	40.0%
	GTCATTTCTTCCGCGAAAAT+TGG	-	chr1_4:66458251-66458270	Msa0179030:CDS	40.0%
	GTAATCACATGTGTAGGTGT+CGG	+	chr1_4:66458383-66458402	None:intergenic	40.0%
!	TGCATTCAGTTTGCTTAGCT+TGG	-	chr1_4:66458477-66458496	Msa0179030:intron	40.0%
!!	TAGGTGGGTTTTGATGAACT+TGG	-	chr1_4:66459053-66459072	Msa0179030:intron	40.0%
!!!	CGAGGTTTTGGAAGAAAGAT+TGG	-	chr1_4:66459097-66459116	Msa0179030:intron	40.0%
!	AGCTCAAGTCATCTTTTTGG+AGG	-	chr1_4:66459124-66459143	Msa0179030:intron	40.0%
!	GCTCAAGTCATCTTTTTGGA+GGG	-	chr1_4:66459125-66459144	Msa0179030:intron	40.0%
	AATCATCAATACACCGTGCA+AGG	-	chr1_4:66459150-66459169	Msa0179030:CDS	40.0%
!!	CGCAAACCAAAAGAAGTGTT+CGG	-	chr1_4:66459180-66459199	Msa0179030:CDS	40.0%
!!	TTTTATTTACGTTGCCCTCC+TGG	-	chr1_4:66459257-66459276	Msa0179030:CDS	40.0%
	AAACTTACAAGACACACGAG+TGG	+	chr1_4:66459362-66459381	None:intergenic	40.0%
	CAGGATAATCCAAACAAGAC+TGG	+	chr1_4:66459422-66459441	None:intergenic	40.0%
	GTTTGAAGGTTCCTTTGGTT+TGG	+	chr1_4:66457883-66457902	None:intergenic	40.0%
!!	GATCGAGAATCAAGTACTGA+CGG	-	chr1_4:66458009-66458028	Msa0179030:three_prime_UTR	40.0%
	ATCTTGAAGCCCTAAGAGAA+AGG	-	chr1_4:66458098-66458117	Msa0179030:three_prime_UTR	40.0%
	GAGAAGAAGTCTTTCTCTGA+CGG	+	chr1_4:66458202-66458221	None:intergenic	40.0%
	ACGATCACTTGCTTTAACGA+CGG	+	chr1_4:66458224-66458243	None:intergenic	40.0%
	GTCATTTCTTCCGCGAAAAT+TGG	-	chr1_4:66458251-66458270	Msa0179030:CDS	40.0%
	GTAATCACATGTGTAGGTGT+CGG	+	chr1_4:66458383-66458402	None:intergenic	40.0%
!	TGCATTCAGTTTGCTTAGCT+TGG	-	chr1_4:66458477-66458496	Msa0179030:intron	40.0%
!!	TAGGTGGGTTTTGATGAACT+TGG	-	chr1_4:66459053-66459072	Msa0179030:intron	40.0%
!!!	CGAGGTTTTGGAAGAAAGAT+TGG	-	chr1_4:66459097-66459116	Msa0179030:intron	40.0%
!	AGCTCAAGTCATCTTTTTGG+AGG	-	chr1_4:66459124-66459143	Msa0179030:intron	40.0%
!	GCTCAAGTCATCTTTTTGGA+GGG	-	chr1_4:66459125-66459144	Msa0179030:intron	40.0%
	AATCATCAATACACCGTGCA+AGG	-	chr1_4:66459150-66459169	Msa0179030:CDS	40.0%
!!	CGCAAACCAAAAGAAGTGTT+CGG	-	chr1_4:66459180-66459199	Msa0179030:CDS	40.0%
!!	TTTTATTTACGTTGCCCTCC+TGG	-	chr1_4:66459257-66459276	Msa0179030:CDS	40.0%
	AAACTTACAAGACACACGAG+TGG	+	chr1_4:66459362-66459381	None:intergenic	40.0%
	CAGGATAATCCAAACAAGAC+TGG	+	chr1_4:66459422-66459441	None:intergenic	40.0%
!	ATGCCGTTTGAAGGTTCCTT+TGG	+	chr1_4:66457888-66457907	None:intergenic	45.0%
	AGAGAGAGAGAGAGAGATCT+AGG	-	chr1_4:66457950-66457969	Msa0179030:three_prime_UTR	45.0%
	GGACAAAGGAAAGATCCAAG+AGG	-	chr1_4:66457985-66458004	Msa0179030:three_prime_UTR	45.0%
	CTTGATTCTCGATCACCTCT+TGG	+	chr1_4:66458003-66458022	None:intergenic	45.0%
	TTGAAGCCCTAAGAGAAAGG+AGG	-	chr1_4:66458101-66458120	Msa0179030:three_prime_UTR	45.0%
	TTGCAGCCTCCTTTCTCTTA+GGG	+	chr1_4:66458110-66458129	None:intergenic	45.0%
	GTCTTTCTCTGACGGAATCT+CGG	+	chr1_4:66458194-66458213	None:intergenic	45.0%
	GAAATTGTGCGAACCTTGCA+GGG	+	chr1_4:66458277-66458296	None:intergenic	45.0%
	TGTGCTCACAGTTCATTCAC+AGG	-	chr1_4:66458745-66458764	Msa0179030:intron	45.0%
	CACAGTTCATTCACAGGTTG+TGG	-	chr1_4:66458751-66458770	Msa0179030:intron	45.0%
	CGAAGCAGCATATTGAGACT+CGG	-	chr1_4:66458795-66458814	Msa0179030:intron	45.0%
!!	GTGGGTTTTGATGAACTTGG+TGG	-	chr1_4:66459056-66459075	Msa0179030:intron	45.0%
	TACTGATGACTTTAGCACCG+AGG	-	chr1_4:66459079-66459098	Msa0179030:intron	45.0%
!!	TGACTTTAGCACCGAGGTTT+TGG	-	chr1_4:66459085-66459104	Msa0179030:intron	45.0%
!	ATGCCGTTTGAAGGTTCCTT+TGG	+	chr1_4:66457888-66457907	None:intergenic	45.0%
	AGAGAGAGAGAGAGAGATCT+AGG	-	chr1_4:66457950-66457969	Msa0179030:three_prime_UTR	45.0%
	GGACAAAGGAAAGATCCAAG+AGG	-	chr1_4:66457985-66458004	Msa0179030:three_prime_UTR	45.0%
	CTTGATTCTCGATCACCTCT+TGG	+	chr1_4:66458003-66458022	None:intergenic	45.0%
	TTGAAGCCCTAAGAGAAAGG+AGG	-	chr1_4:66458101-66458120	Msa0179030:three_prime_UTR	45.0%
	TTGCAGCCTCCTTTCTCTTA+GGG	+	chr1_4:66458110-66458129	None:intergenic	45.0%
	GTCTTTCTCTGACGGAATCT+CGG	+	chr1_4:66458194-66458213	None:intergenic	45.0%
	GAAATTGTGCGAACCTTGCA+GGG	+	chr1_4:66458277-66458296	None:intergenic	45.0%
	TGTGCTCACAGTTCATTCAC+AGG	-	chr1_4:66458745-66458764	Msa0179030:intron	45.0%
	CACAGTTCATTCACAGGTTG+TGG	-	chr1_4:66458751-66458770	Msa0179030:intron	45.0%
	CGAAGCAGCATATTGAGACT+CGG	-	chr1_4:66458795-66458814	Msa0179030:intron	45.0%
!!	GTGGGTTTTGATGAACTTGG+TGG	-	chr1_4:66459056-66459075	Msa0179030:intron	45.0%
	TACTGATGACTTTAGCACCG+AGG	-	chr1_4:66459079-66459098	Msa0179030:intron	45.0%
!!	TGACTTTAGCACCGAGGTTT+TGG	-	chr1_4:66459085-66459104	Msa0179030:intron	45.0%
	TGAACTCAAAGTGCAGAGCG+AGG	-	chr1_4:66457924-66457943	Msa0179030:three_prime_UTR	50.0%
	GAACTCAAAGTGCAGAGCGA+GGG	-	chr1_4:66457925-66457944	Msa0179030:three_prime_UTR	50.0%
!!	CGAGAATCAAGTACTGACGG+TGG	-	chr1_4:66458012-66458031	Msa0179030:three_prime_UTR	50.0%
	GTCATCGTCGAGACGTTCAA+GGG	+	chr1_4:66458077-66458096	None:intergenic	50.0%
	GTTGCAGCCTCCTTTCTCTT+AGG	+	chr1_4:66458111-66458130	None:intergenic	50.0%
	CGAAATTGTGCGAACCTTGC+AGG	+	chr1_4:66458278-66458297	None:intergenic	50.0%
	CGGTGTGGATGTGTAGTGTT+AGG	-	chr1_4:66458411-66458430	Msa0179030:intron	50.0%
	TCAATACACCGTGCAAGGTC+CGG	-	chr1_4:66459155-66459174	Msa0179030:CDS	50.0%
!!!	ACTTCTTTTGGTTTGCGCCC+CGG	+	chr1_4:66459177-66459196	None:intergenic	50.0%
!	GCTCTGCCGAACACTTCTTT+TGG	+	chr1_4:66459189-66459208	None:intergenic	50.0%
	AAGTGTTCGGCAGAGCACAA+CGG	-	chr1_4:66459193-66459212	Msa0179030:CDS	50.0%
	ATCTGAGCTCTCGTCTTTCC+AGG	+	chr1_4:66459278-66459297	None:intergenic	50.0%
	TGAACTCAAAGTGCAGAGCG+AGG	-	chr1_4:66457924-66457943	Msa0179030:three_prime_UTR	50.0%
	GAACTCAAAGTGCAGAGCGA+GGG	-	chr1_4:66457925-66457944	Msa0179030:three_prime_UTR	50.0%
!!	CGAGAATCAAGTACTGACGG+TGG	-	chr1_4:66458012-66458031	Msa0179030:three_prime_UTR	50.0%
	GTCATCGTCGAGACGTTCAA+GGG	+	chr1_4:66458077-66458096	None:intergenic	50.0%
	GTTGCAGCCTCCTTTCTCTT+AGG	+	chr1_4:66458111-66458130	None:intergenic	50.0%
	CGAAATTGTGCGAACCTTGC+AGG	+	chr1_4:66458278-66458297	None:intergenic	50.0%
	CGGTGTGGATGTGTAGTGTT+AGG	-	chr1_4:66458411-66458430	Msa0179030:intron	50.0%
	TCAATACACCGTGCAAGGTC+CGG	-	chr1_4:66459155-66459174	Msa0179030:CDS	50.0%
!!!	ACTTCTTTTGGTTTGCGCCC+CGG	+	chr1_4:66459177-66459196	None:intergenic	50.0%
!	GCTCTGCCGAACACTTCTTT+TGG	+	chr1_4:66459189-66459208	None:intergenic	50.0%
	AAGTGTTCGGCAGAGCACAA+CGG	-	chr1_4:66459193-66459212	Msa0179030:CDS	50.0%
	ATCTGAGCTCTCGTCTTTCC+AGG	+	chr1_4:66459278-66459297	None:intergenic	50.0%
	CGTCATCGTCGAGACGTTCA+AGG	+	chr1_4:66458078-66458097	None:intergenic	55.0%
	GGTGTAATCTCCGTGTCCGA+GGG	+	chr1_4:66458173-66458192	None:intergenic	55.0%
!	CCTTGCAGGGCCAATTTTCG+CGG	+	chr1_4:66458264-66458283	None:intergenic	55.0%
	CAATACACCGTGCAAGGTCC+GGG	-	chr1_4:66459156-66459175	Msa0179030:CDS	55.0%
	AATACACCGTGCAAGGTCCG+GGG	-	chr1_4:66459157-66459176	Msa0179030:CDS	55.0%
	GAGCTCTCGTCTTTCCAGGA+GGG	+	chr1_4:66459274-66459293	None:intergenic	55.0%
	TGAGCTCTCGTCTTTCCAGG+AGG	+	chr1_4:66459275-66459294	None:intergenic	55.0%
	CGTCATCGTCGAGACGTTCA+AGG	+	chr1_4:66458078-66458097	None:intergenic	55.0%
	GGTGTAATCTCCGTGTCCGA+GGG	+	chr1_4:66458173-66458192	None:intergenic	55.0%
!	CCTTGCAGGGCCAATTTTCG+CGG	+	chr1_4:66458264-66458283	None:intergenic	55.0%
	CAATACACCGTGCAAGGTCC+GGG	-	chr1_4:66459156-66459175	Msa0179030:CDS	55.0%
	AATACACCGTGCAAGGTCCG+GGG	-	chr1_4:66459157-66459176	Msa0179030:CDS	55.0%
	GAGCTCTCGTCTTTCCAGGA+GGG	+	chr1_4:66459274-66459293	None:intergenic	55.0%
	TGAGCTCTCGTCTTTCCAGG+AGG	+	chr1_4:66459275-66459294	None:intergenic	55.0%
	CGTAGCCGTTGGATCTCCCT+CGG	-	chr1_4:66458154-66458173	Msa0179030:exon	60.0%
	CGTGTCCGAGGGAGATCCAA+CGG	+	chr1_4:66458162-66458181	None:intergenic	60.0%
	CGTTGGATCTCCCTCGGACA+CGG	-	chr1_4:66458160-66458179	Msa0179030:exon	60.0%
	CGGTGTAATCTCCGTGTCCG+AGG	+	chr1_4:66458174-66458193	None:intergenic	60.0%
	CCGCGAAAATTGGCCCTGCA+AGG	-	chr1_4:66458261-66458280	Msa0179030:CDS	60.0%
	CGTAGCCGTTGGATCTCCCT+CGG	-	chr1_4:66458154-66458173	Msa0179030:exon	60.0%
	CGTGTCCGAGGGAGATCCAA+CGG	+	chr1_4:66458162-66458181	None:intergenic	60.0%
	CGTTGGATCTCCCTCGGACA+CGG	-	chr1_4:66458160-66458179	Msa0179030:exon	60.0%
	CGGTGTAATCTCCGTGTCCG+AGG	+	chr1_4:66458174-66458193	None:intergenic	60.0%
	CCGCGAAAATTGGCCCTGCA+AGG	-	chr1_4:66458261-66458280	Msa0179030:CDS	60.0%
!	TGGCGGAGAAGCGTAGCCGT+TGG	-	chr1_4:66458143-66458162	Msa0179030:three_prime_UTR	65.0%
	TTTGCGCCCCGGACCTTGCA+CGG	+	chr1_4:66459166-66459185	None:intergenic	65.0%
!	TGGCGGAGAAGCGTAGCCGT+TGG	-	chr1_4:66458143-66458162	Msa0179030:three_prime_UTR	65.0%
	TTTGCGCCCCGGACCTTGCA+CGG	+	chr1_4:66459166-66459185	None:intergenic	65.0%
	GACGGTGGCGCAAGCAGTCG+AGG	-	chr1_4:66458027-66458046	Msa0179030:three_prime_UTR	70.0%
	GACGGTGGCGCAAGCAGTCG+AGG	-	chr1_4:66458027-66458046	Msa0179030:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	66457772	66459636	66457772	ID=Msa0179030;Name=Msa0179030
chr1_4	mRNA	66457772	66459636	66457772	ID=Msa0179030-mRNA-1;Parent=Msa0179030;Name=Msa0179030-mRNA-1;_AED=0.01;_eAED=0.01;_QI=211\|1\|1\|1\|1\|1\|3\|398\|213
chr1_4	exon	66457772	66458352	66457772	ID=Msa0179030-mRNA-1:exon:21740;Parent=Msa0179030-mRNA-1
chr1_4	exon	66458483	66458641	66458483	ID=Msa0179030-mRNA-1:exon:21739;Parent=Msa0179030-mRNA-1
chr1_4	exon	66459126	66459636	66459126	ID=Msa0179030-mRNA-1:exon:21738;Parent=Msa0179030-mRNA-1
chr1_4	five_prime_UTR	66459426	66459636	66459426	ID=Msa0179030-mRNA-1:five_prime_utr;Parent=Msa0179030-mRNA-1
chr1_4	CDS	66459126	66459425	66459126	ID=Msa0179030-mRNA-1:cds;Parent=Msa0179030-mRNA-1
chr1_4	CDS	66458483	66458641	66458483	ID=Msa0179030-mRNA-1:cds;Parent=Msa0179030-mRNA-1
chr1_4	CDS	66458170	66458352	66458170	ID=Msa0179030-mRNA-1:cds;Parent=Msa0179030-mRNA-1
chr1_4	three_prime_UTR	66457772	66458169	66457772	ID=Msa0179030-mRNA-1:three_prime_utr;Parent=Msa0179030-mRNA-1

Gene Sequence

>Msa0179030

ATGGACAAAGGAAAGATCCAAGAGGTGATCGAGAATCAAGTACTGACGGTGGCGCAAGCAGTCGAGGATAAGATCGACGAAGAGATTGCTGCCCTTGAACGTCTCGACGATGACGATCTTGAAGCCCTAAGAGAAAGGAGGCTGCAACAAATGAAGAAAATGGCGGAGAAGCGTAGCCGTTGGATCTCCCTCGGACACGGAGATTACACCGAGATTCCGTCAGAGAAAGACTTCTTCTCCGTCGTTAAAGCAAGTGATCGTGTTGTTTGTCATTTCTTCCGCGAAAATTGGCCCTGCAAGGTTGTGGACAAGCATTTAAGTATTTTGGCGAAGCAGCATATTGAGACTCGGTTTGTGAAAATAAATGCTGAAAAAAGTCCATTTTTAGCTGAGAAGCTCAAGATCATTGTTCTTCCAACTATTGCTCTCATAAAGAATACCAAAGTGGATGATTATGTGGTGGGTTTTGATGAACTTGGTGGTACTGATGACTTTAGCACCGAGGTTTTGGAAGAAAGATTGGCTAAAGCTCAAGTCATCTTTTTGGAGGGTGAATCATCAATACACCGTGCAAGGTCCGGGGCGCAAACCAAAAGAAGTGTTCGGCAGAGCACAACGGCTGACTCCTCAGATTCTGAGTAA

Protein sequence

>Msa0179030

MDKGKIQEVIENQVLTVAQAVEDKIDEEIAALERLDDDDLEALRERRLQQMKKMAEKRSRWISLGHGDYTEIPSEKDFFSVVKASDRVVCHFFRENWPCKVVDKHLSILAKQHIETRFVKINAEKSPFLAEKLKIIVLPTIALIKNTKVDDYVVGFDELGGTDDFSTEVLEERLAKAQVIFLEGESSIHRARSGAQTKRSVRQSTTADSSDSE*