AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0224600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224600 MtrunA17_Chr2g0330651 98.438 320 5 0 122 441 206 525 0.0 659
Msa0224600 MtrunA17_Chr2g0330651 84.559 136 15 1 1 130 1 136 4.57e-66 223
Msa0224600 MtrunA17_Chr4g0029231 27.526 287 162 7 152 396 359 641 2.77e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224600 AT3G21300.1 77.538 325 71 1 122 446 202 524 1.31e-179 516
Msa0224600 AT3G21300.1 65.854 82 23 2 56 133 54 134 4.57e-27 115
Msa0224600 AT2G28450.1 30.769 221 111 6 194 374 392 610 6.72e-18 87.8
Msa0224600 AT2G28450.2 30.769 221 111 6 194 374 392 610 7.98e-18 87.4

Find 175 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTGTAAAGCATGTTTA+TGG 0.151368 2_1:-74526086 Msa0224600:intron
GGTGTTAGGGTTTGGGGTTT+TGG 0.151935 2_1:+74530014 None:intergenic
TCAAGTTCCTCTTAAATCTT+AGG 0.161824 2_1:-74525449 Msa0224600:CDS
AATAAAATTGATGGAAATTT+CGG 0.162241 2_1:-74525972 Msa0224600:CDS
AGAAAGAGTTTGCTGATATT+TGG 0.173639 2_1:+74526441 None:intergenic
AATTGGAGGTGTTAGGGTTT+GGG 0.184627 2_1:+74530007 None:intergenic
TGGAATGCTGCATCTATATT+TGG 0.184814 2_1:-74523760 Msa0224600:three_prime_UTR
ATCTCATTCTCAGTGAAAAT+TGG 0.187514 2_1:+74524013 None:intergenic
AAACCTGACATTGTTATTTC+AGG 0.189166 2_1:-74525936 Msa0224600:intron
GTTGGTTCTGGTTGTGGTTC+GGG 0.205534 2_1:+74530054 None:intergenic
TCTTTAGGCAACCATTTATA+TGG 0.207383 2_1:+74528705 None:intergenic
TCTCATTTGGTCCATATAAA+TGG 0.212001 2_1:-74528716 Msa0224600:CDS
TGGGTCTTCAAGTTGATAAA+TGG 0.238426 2_1:-74524545 Msa0224600:CDS
TCGAGGGTTTGGCCGCGTTT+AGG 0.242935 2_1:+74529976 None:intergenic
TACTAGATATAGGTCAAAAT+TGG 0.249301 2_1:-74524565 Msa0224600:CDS
CGACTTAATGCCAAGCTAAA+TGG 0.256646 2_1:-74526029 Msa0224600:CDS
ATAAAATTGATGGAAATTTC+GGG 0.260144 2_1:-74525971 Msa0224600:CDS
ACAAACTGATCCTGCTAATA+AGG 0.268322 2_1:-74528577 Msa0224600:intron
GAAGTTGTGGTGGTTGGTTC+TGG 0.271287 2_1:+74530042 None:intergenic
CTTTGTTTAGCATACAAGTT+AGG 0.286095 2_1:+74523934 None:intergenic
GCACTTGGATTGCATGTTCC+TGG 0.301094 2_1:-74528639 Msa0224600:CDS
GGTTGGTTCTGGTTGTGGTT+CGG 0.306125 2_1:+74530053 None:intergenic
CGAGGGTTTGGCCGCGTTTA+GGG 0.308019 2_1:+74529977 None:intergenic
TTGGCCGCGTTTAGGGAAAT+AGG 0.315601 2_1:+74529984 None:intergenic
GAATTGGAGGTGTTAGGGTT+TGG 0.315723 2_1:+74530006 None:intergenic
ATCAGCTTCATGTGCATCCC+TGG 0.321719 2_1:+74525471 None:intergenic
CTTTCGTGCAGCGACTCTTT+AGG 0.323603 2_1:+74528690 None:intergenic
CGCAGAGTAGTTCGAGGGTT+TGG 0.329817 2_1:+74529965 None:intergenic
AAAGTTTCTTTCTGTATAGA+TGG 0.330216 2_1:-74523810 Msa0224600:three_prime_UTR
ATGTACATATTAAGTCATTA+AGG 0.333177 2_1:-74523848 Msa0224600:three_prime_UTR
AATAGGAATTGGAGGTGTTA+GGG 0.340379 2_1:+74530001 None:intergenic
CTTCCCGGTGAACGTTTCAT+TGG 0.345606 2_1:-74529868 Msa0224600:CDS
AAATAGGAATTGGAGGTGTT+AGG 0.347221 2_1:+74530000 None:intergenic
GAAATAACAATGTCAGGTTT+AGG 0.350429 2_1:+74525939 None:intergenic
GTGTAGATGGAATTCTCATT+TGG 0.359119 2_1:-74528729 Msa0224600:intron
GGAGTGGGAGTGTGTTTGTT+AGG 0.369822 2_1:+74530148 None:intergenic
CTTTCAAACAAATACTCATC+AGG 0.380438 2_1:-74526420 Msa0224600:intron
ATGAATAATGTTCACTCATA+TGG 0.381599 2_1:+74524195 None:intergenic
ATTGGAGGTGTTAGGGTTTG+GGG 0.387688 2_1:+74530008 None:intergenic
TACTAGGACCTTCAGCAAAT+CGG 0.389943 2_1:+74527535 None:intergenic
ACTTAAGTACCAACCACTTC+GGG 0.397718 2_1:+74527494 None:intergenic
CTTCAGCAAATCGGGCTTGT+AGG 0.401351 2_1:+74527544 None:intergenic
CATGTGCATCCCTGGGCGGT+TGG 0.403322 2_1:+74525479 None:intergenic
GGGGATCTTAATAAAATTGA+TGG 0.405003 2_1:-74525981 Msa0224600:CDS
CTGTTGGTAACACATCTGTT+GGG 0.409302 2_1:-74526526 Msa0224600:CDS
TTGGAATGTAAGCCCTCTTA+AGG 0.412540 2_1:+74526460 None:intergenic
GGAATGCTGCATCTATATTT+GGG 0.414205 2_1:-74523759 Msa0224600:three_prime_UTR
TGTATAGATGGATCCATGTT+TGG 0.416940 2_1:-74523798 Msa0224600:three_prime_UTR
GTAAGAGTCATGTCTGCTTC+CGG 0.417255 2_1:+74523967 None:intergenic
GGGTCTTCAAGTTGATAAAT+GGG 0.425649 2_1:-74524544 Msa0224600:CDS
GCGTTTAGGGAAATAGGAAT+TGG 0.426518 2_1:+74529990 None:intergenic
ATGTGCATCCCTGGGCGGTT+GGG 0.427113 2_1:+74525480 None:intergenic
TTCCCGGTGAACGTTTCATT+GGG 0.427762 2_1:-74529867 Msa0224600:CDS
AGCATTACAGAGACCTTAAG+AGG 0.427859 2_1:-74526473 Msa0224600:CDS
TGGTGCCTGTTCCACAAAAC+AGG 0.428574 2_1:+74526213 None:intergenic
AGCAAAACGGTGAGAGGGAG+AGG 0.432701 2_1:+74530101 None:intergenic
ATGTGTGACCGTGCACTTCC+CGG 0.435237 2_1:-74529883 Msa0224600:CDS
TTAAGTGCTGCTGTCATGCC+GGG 0.438590 2_1:-74524104 Msa0224600:three_prime_UTR
AGTGAATAGTAATCCGCATT+TGG 0.441363 2_1:+74524323 None:intergenic
TTTGTTTAGCATACAAGTTA+GGG 0.441945 2_1:+74523935 None:intergenic
TTCTGGTTGTGGTTCGGGGA+GGG 0.444485 2_1:+74530059 None:intergenic
ATTTAGCTTGGCATTAAGTC+GGG 0.446515 2_1:+74526031 None:intergenic
TCCATGTTTGGTAGAAGAGC+TGG 0.447011 2_1:-74523786 Msa0224600:three_prime_UTR
CAAGTTCCTCTTAAATCTTA+GGG 0.452080 2_1:-74525448 Msa0224600:CDS
ACTAGGACCTTCAGCAAATC+GGG 0.455837 2_1:+74527536 None:intergenic
CTATTTATGCAGAGCTCTCA+AGG 0.455970 2_1:-74524366 Msa0224600:intron
GACTTAATATGTACATATCC+TGG 0.456520 2_1:+74523855 None:intergenic
ACAAGCTTGGTACTAGATAT+AGG 0.461879 2_1:-74524575 Msa0224600:CDS
TCACTGAGAATGAGATCAAA+GGG 0.462080 2_1:-74524006 Msa0224600:three_prime_UTR
TAGGTCTGACACTTGCAAAA+AGG 0.462822 2_1:-74526190 Msa0224600:intron
ACAAAATGCAACATTTATTG+AGG 0.464324 2_1:-74526003 Msa0224600:CDS
TGTACATATTAAGTCATTAA+GGG 0.468879 2_1:-74523847 Msa0224600:three_prime_UTR
CTATGCAAAGTTACTGATAC+CGG 0.471685 2_1:-74529916 Msa0224600:CDS
GATTCTTGCTTAATTGAAGA+AGG 0.472098 2_1:-74524253 Msa0224600:CDS
GTCACACATGACTACAAAAC+CGG 0.472473 2_1:+74529897 None:intergenic
ATTAAGTGCTGCTGTCATGC+CGG 0.472823 2_1:-74524105 Msa0224600:three_prime_UTR
TTTGTGTGAATGAACATTGT+AGG 0.475932 2_1:+74528366 None:intergenic
TGCATGAAACTTCAGATGCT+TGG 0.479565 2_1:-74524218 Msa0224600:three_prime_UTR
TGTTCTAGGGATGTAATGAC+TGG 0.481380 2_1:-74527602 Msa0224600:intron
GTGGTGGTTGGTTCTGGTTG+TGG 0.481772 2_1:+74530048 None:intergenic
ACTAGATATAGGTCAAAATT+GGG 0.484678 2_1:-74524564 Msa0224600:CDS
GAATTACGCGGAGGCTACTA+AGG 0.485129 2_1:-74529824 Msa0224600:intron
TTTGGTAGAAGAGCTGGGTC+TGG 0.486254 2_1:-74523780 Msa0224600:three_prime_UTR
CACGAAAGAAATGTTGATGC+TGG 0.489316 2_1:-74528675 Msa0224600:CDS
GGAATTGAAGTTGTGGTGGT+TGG 0.489461 2_1:+74530036 None:intergenic
TGCTTAATTGAAGAAGGTTG+AGG 0.490284 2_1:-74524247 Msa0224600:exon
CATTTAGCTTGGCATTAAGT+CGG 0.491991 2_1:+74526030 None:intergenic
CAAAATGCAACATTTATTGA+GGG 0.494797 2_1:-74526002 Msa0224600:CDS
TCTGTTGGTAACACATCTGT+TGG 0.496204 2_1:-74526527 Msa0224600:CDS
ATGCAGAAACTTTATCTACT+AGG 0.496736 2_1:+74527519 None:intergenic
GAACCTGAAATAACAATGTC+AGG 0.501451 2_1:+74525933 None:intergenic
AAACGGTGAGAGGGAGAGGA+TGG 0.504252 2_1:+74530105 None:intergenic
ACATTGCATACCTTATTAGC+AGG 0.505849 2_1:+74528567 None:intergenic
CCGGTGAACGTTTCATTGGG+AGG 0.509228 2_1:-74529864 Msa0224600:CDS
AGGTCACGTGCACATGTAGC+AGG 0.511360 2_1:+74525396 None:intergenic
ACCTTTGCCTTTAAAAGCGA+GGG 0.514290 2_1:+74529939 None:intergenic
TTTGGGAATTGAAGTTGTGG+TGG 0.514781 2_1:+74530032 None:intergenic
TAACACATCTGTTGGGGAGG+AGG 0.517341 2_1:-74526519 Msa0224600:CDS
TGGGAGGATTACTCGAAAGA+AGG 0.521125 2_1:-74529848 Msa0224600:CDS
AATAATGTAAATACTTCTGT+TGG 0.525332 2_1:-74526542 Msa0224600:CDS
CCCAGCTCTTCTACCAAACA+TGG 0.525509 2_1:+74523785 None:intergenic
CGGGCATCTGCGATGGCTTG+AGG 0.525665 2_1:+74526050 None:intergenic
TTGCGGCTATACAAGAATGT+TGG 0.526698 2_1:-74528414 Msa0224600:CDS
GACCTTTGCCTTTAAAAGCG+AGG 0.526847 2_1:+74529938 None:intergenic
GGGAGGATTACTCGAAAGAA+GGG 0.529171 2_1:-74529847 Msa0224600:CDS
TGTTGGAGAGATCCACAACT+TGG 0.529697 2_1:-74528397 Msa0224600:CDS
CCTCCCAATGAAACGTTCAC+CGG 0.530155 2_1:+74529864 None:intergenic
CTTTCAGGAGATAACAAGCT+TGG 0.532626 2_1:-74524588 Msa0224600:intron
AGTTTCTGCATTTCCCGAAG+TGG 0.533202 2_1:-74527507 Msa0224600:intron
AACTTAAGTACCAACCACTT+CGG 0.533340 2_1:+74527493 None:intergenic
TATGCAGAGCTCTCAAGGGT+TGG 0.534731 2_1:-74524361 Msa0224600:intron
AATACAGATCCCAACCGCCC+AGG 0.534815 2_1:-74525489 Msa0224600:intron
GGGAGTGAAAATTATGCACT+TGG 0.538441 2_1:-74528654 Msa0224600:CDS
TTGGTTCTGGTTGTGGTTCG+GGG 0.541358 2_1:+74530055 None:intergenic
GAGGAGGAATACACTTTGCA+TGG 0.544319 2_1:-74526503 Msa0224600:CDS
TGTTGGTAACACATCTGTTG+GGG 0.546344 2_1:-74526525 Msa0224600:CDS
TTCACTGAGAATGAGATCAA+AGG 0.546612 2_1:-74524007 Msa0224600:three_prime_UTR
GGGGTACTACTAGCTCAAAC+CGG 0.547305 2_1:-74523986 Msa0224600:three_prime_UTR
ACAAAGTTGACCATTACTTC+AGG 0.548753 2_1:+74527575 None:intergenic
ATACAGATCCCAACCGCCCA+GGG 0.549026 2_1:-74525488 Msa0224600:intron
CTCCCAATGAAACGTTCACC+GGG 0.549681 2_1:+74529865 None:intergenic
GTTCTGGTTGTGGTTCGGGG+AGG 0.555312 2_1:+74530058 None:intergenic
GCACATGCTTTCACGCTGCA+AGG 0.555937 2_1:-74524518 Msa0224600:intron
CTACAAGCCCGATTTGCTGA+AGG 0.558205 2_1:-74527543 Msa0224600:CDS
GGATATGATCTACTTCATGA+TGG 0.558357 2_1:+74524287 None:intergenic
GACTGGTCTGCCTGAAGTAA+TGG 0.558686 2_1:-74527585 Msa0224600:CDS
AGAGAGAGCAAAACGGTGAG+AGG 0.560069 2_1:+74530095 None:intergenic
GAGAGAGCAAAACGGTGAGA+GGG 0.560392 2_1:+74530096 None:intergenic
TGTGCTGGCATCAGAGGAGA+TGG 0.560798 2_1:-74526254 Msa0224600:CDS
GAGGCGCCCTAAGATTTAAG+AGG 0.561291 2_1:+74525442 None:intergenic
TTGTGTGAATGAACATTGTA+GGG 0.564703 2_1:+74528367 None:intergenic
ATTAAGTCGGGCATCTGCGA+TGG 0.565964 2_1:+74526043 None:intergenic
AATAGTAATCCGCATTTGGA+AGG 0.567543 2_1:+74524327 None:intergenic
GTACATATTAAGTCATTAAG+GGG 0.568642 2_1:-74523846 Msa0224600:three_prime_UTR
TTTAGGGAAATAGGAATTGG+AGG 0.569455 2_1:+74529993 None:intergenic
GAAGAATGTGCTGGCATCAG+AGG 0.571478 2_1:-74526260 Msa0224600:CDS
TCAGCTTCATGTGCATCCCT+GGG 0.572316 2_1:+74525472 None:intergenic
AAGCATTTGATGCTGAGAAG+TGG 0.572814 2_1:-74528334 Msa0224600:CDS
AAACTCATCGAAGAATGTGC+TGG 0.574226 2_1:-74526269 Msa0224600:CDS
CAAATCGGGCTTGTAGGAAG+AGG 0.574944 2_1:+74527550 None:intergenic
CCATGTTTGGTAGAAGAGCT+GGG 0.576071 2_1:-74523785 Msa0224600:three_prime_UTR
AACGGTGAGAGGGAGAGGAT+GGG 0.581626 2_1:+74530106 None:intergenic
AGCAAGAATCTGACAAGTGT+AGG 0.587549 2_1:+74524266 None:intergenic
GACCTTGATTATCTCTGTCA+TGG 0.592498 2_1:-74525378 Msa0224600:CDS
TAGTTCTTACCTTCCAAATG+CGG 0.596691 2_1:-74524336 Msa0224600:CDS
AAATGCAACATTTATTGAGG+GGG 0.600230 2_1:-74526000 Msa0224600:CDS
TGATTATCTCTGTCATGGTG+TGG 0.603583 2_1:-74525373 Msa0224600:intron
GGGATTCGCAGAGTAGTTCG+AGG 0.603852 2_1:+74529959 None:intergenic
AGAGAGTAGAGAGAGCAAAA+CGG 0.604713 2_1:+74530088 None:intergenic
AACATCTGAACAGGTTCTTG+CGG 0.610504 2_1:-74528431 Msa0224600:intron
AACGTTCACCGGGAAGTGCA+CGG 0.619488 2_1:+74529875 None:intergenic
TATTTATGCAGAGCTCTCAA+GGG 0.620100 2_1:-74524365 Msa0224600:intron
AAAATGCAACATTTATTGAG+GGG 0.623055 2_1:-74526001 Msa0224600:CDS
TACAATGTTCATTCACACAA+AGG 0.623279 2_1:-74528364 Msa0224600:CDS
CACCATGACAGAGATAATCA+AGG 0.625231 2_1:+74525376 None:intergenic
TTGTTTAGCATACAAGTTAG+GGG 0.625787 2_1:+74523936 None:intergenic
CTGTTCCACAAAACAGGTCA+AGG 0.628072 2_1:+74526219 None:intergenic
GGATTCGCAGAGTAGTTCGA+GGG 0.629285 2_1:+74529960 None:intergenic
TAGGGTGAGAAACCAAGTTG+TGG 0.632395 2_1:+74528385 None:intergenic
AGGAGGAATACACTTTGCAT+GGG 0.640766 2_1:-74526502 Msa0224600:CDS
TGGTAACACATCTGTTGGGG+AGG 0.641397 2_1:-74526522 Msa0224600:CDS
GCATTACAGAGACCTTAAGA+GGG 0.644303 2_1:-74526472 Msa0224600:CDS
CATGAAACATACACTATGCG+AGG 0.646643 2_1:+74525423 None:intergenic
ACGAAAGAAATGTTGATGCT+GGG 0.651196 2_1:-74528674 Msa0224600:CDS
ATTTGATGCTGAGAAGTGGA+AGG 0.658726 2_1:-74528330 Msa0224600:intron
TTAATATGTACATATCCTGG+AGG 0.664729 2_1:+74523858 None:intergenic
AATTCCTATTTCCCTAAACG+CGG 0.665097 2_1:-74529988 Msa0224600:CDS
TACATATTAAGTCATTAAGG+GGG 0.669438 2_1:-74523845 Msa0224600:three_prime_UTR
TAATATGTACATATCCTGGA+GGG 0.676060 2_1:+74523859 None:intergenic
GCTTCATGTGCATCCCTGGG+CGG 0.687592 2_1:+74525475 None:intergenic
GGAGGATTACTCGAAAGAAG+GGG 0.687721 2_1:-74529846 Msa0224600:CDS
TAAGTGCTGCTGTCATGCCG+GGG 0.688064 2_1:-74524103 Msa0224600:three_prime_UTR
CACTGAGAATGAGATCAAAG+GGG 0.714159 2_1:-74524005 Msa0224600:three_prime_UTR
TCGAAAGAAGGGGAATTACG+CGG 0.719439 2_1:-74529836 Msa0224600:CDS
AAAGAAGGGGAATTACGCGG+AGG 0.735551 2_1:-74529833 Msa0224600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTTAATTTTTGTTCT+AGG - chr2_1:74526311-74526330 Msa0224600:intron 10.0%
!!! AATATTTAATTTTTGTTCTA+GGG - chr2_1:74526312-74526331 Msa0224600:intron 10.0%
!! CAATTTAAGAAATAAAATAT+GGG + chr2_1:74527576-74527595 None:intergenic 10.0%
!! TCAATTTAAGAAATAAAATA+TGG + chr2_1:74527577-74527596 None:intergenic 10.0%
!!! TTTTATTGAAATTTCTTATA+GGG + chr2_1:74529064-74529083 None:intergenic 10.0%
!!! TTTTTATTGAAATTTCTTAT+AGG + chr2_1:74529065-74529084 None:intergenic 10.0%
!!! AACATTATGTAATTTTTAAA+AGG + chr2_1:74529188-74529207 None:intergenic 10.0%
!! TTAAATAATTTATCCAAACA+AGG - chr2_1:74524809-74524828 Msa0224600:intron 15.0%
!! ATTAAACTGTTTATATAAAC+AGG - chr2_1:74524967-74524986 Msa0224600:intron 15.0%
!!! ATAATTTTATCAAAAAAACC+AGG + chr2_1:74525309-74525328 None:intergenic 15.0%
!! ATAACAATATTTCATTTGAA+GGG - chr2_1:74526267-74526286 Msa0224600:CDS 15.0%
!! ATTAATATTGATAGAAAACA+AGG + chr2_1:74526295-74526314 None:intergenic 15.0%
!!! TCAAATTTAATTTCTATACA+AGG - chr2_1:74526688-74526707 Msa0224600:intron 15.0%
!!! CTATTAACATTTTAGTTTTA+TGG - chr2_1:74527115-74527134 Msa0224600:intron 15.0%
!! TACAATAATTACATAAAGTT+TGG + chr2_1:74527315-74527334 None:intergenic 15.0%
!! AATAAAATTGATGGAAATTT+CGG - chr2_1:74527955-74527974 Msa0224600:intron 15.0%
!!! TTCGTTATTTATTTCTTTAA+TGG - chr2_1:74528239-74528258 Msa0224600:intron 15.0%
!!! TTATTTATTTCTTTAATGGA+GGG - chr2_1:74528243-74528262 Msa0224600:intron 15.0%
!! TAATTAAAATAGAGCAAATA+TGG + chr2_1:74528344-74528363 None:intergenic 15.0%
!! TTTCAGATTTAGATTATATT+TGG - chr2_1:74528878-74528897 Msa0224600:intron 15.0%
!! TTCAGATTTAGATTATATTT+GGG - chr2_1:74528879-74528898 Msa0224600:intron 15.0%
!! AATTAAATGATAATAACAAC+AGG - chr2_1:74529159-74529178 Msa0224600:intron 15.0%
!! TTGAAAACATTTAAAAAAAG+AGG + chr2_1:74529801-74529820 None:intergenic 15.0%
!! GTTTATTTGAGCTTATTTAT+TGG - chr2_1:74524280-74524299 Msa0224600:CDS 20.0%
!! CATGGAAAACTTATATAAAT+AGG + chr2_1:74524835-74524854 None:intergenic 20.0%
!! ATATGAAATCAAATAAGTGT+AGG + chr2_1:74525432-74525451 None:intergenic 20.0%
!! TAAGTTTATTCCAAATTCTA+TGG + chr2_1:74525706-74525725 None:intergenic 20.0%
!!! CTCAAACATTGATTTTAAAT+TGG - chr2_1:74526047-74526066 Msa0224600:CDS 20.0%
!!! ACATTGATTTTAAATTGGTA+TGG - chr2_1:74526052-74526071 Msa0224600:CDS 20.0%
!!! TATGGAGTTTATTTTAACTT+GGG - chr2_1:74526070-74526089 Msa0224600:CDS 20.0%
!! CATAACAATATTTCATTTGA+AGG - chr2_1:74526266-74526285 Msa0224600:CDS 20.0%
!! TAAATTTGATCGTAAAGAAT+GGG + chr2_1:74526677-74526696 None:intergenic 20.0%
!! TTAAATTTGATCGTAAAGAA+TGG + chr2_1:74526678-74526697 None:intergenic 20.0%
!! AATTTCTATACAAGGTTAAA+TGG - chr2_1:74526696-74526715 Msa0224600:intron 20.0%
!! ATTTCTATACAAGGTTAAAT+GGG - chr2_1:74526697-74526716 Msa0224600:intron 20.0%
!!! TAACATTTTAGTTTTATGGA+TGG - chr2_1:74527119-74527138 Msa0224600:intron 20.0%
!!! AACATTTTAGTTTTATGGAT+GGG - chr2_1:74527120-74527139 Msa0224600:intron 20.0%
!! AATAATGTAAATACTTCTGT+TGG - chr2_1:74527385-74527404 Msa0224600:intron 20.0%
!!! TTACAATATGCCAATTTTTT+TGG - chr2_1:74527531-74527550 Msa0224600:CDS 20.0%
!!! TCATTTGGTTTTAGTATATT+AGG - chr2_1:74527773-74527792 Msa0224600:intron 20.0%
!! ATAAAATTGATGGAAATTTC+GGG - chr2_1:74527956-74527975 Msa0224600:intron 20.0%
!! AATATACCAATAGAATAAGT+AGG + chr2_1:74528041-74528060 None:intergenic 20.0%
!!! TATTTGATCAGAAGTATATA+TGG - chr2_1:74528092-74528111 Msa0224600:intron 20.0%
!!! GTTATTTATTTCTTTAATGG+AGG - chr2_1:74528242-74528261 Msa0224600:intron 20.0%
!! ATTTAAACCTTTACATTTCA+AGG - chr2_1:74528773-74528792 Msa0224600:intron 20.0%
!! AAAGAAAAGAAAAGAAAAGT+GGG + chr2_1:74529298-74529317 None:intergenic 20.0%
!! TAAAGAAAAGAAAAGAAAAG+TGG + chr2_1:74529299-74529318 None:intergenic 20.0%
!!! GTGTACAAAATTATTTTGAA+TGG - chr2_1:74529470-74529489 Msa0224600:intron 20.0%
!! ATGTACATATTAAGTCATTA+AGG - chr2_1:74530079-74530098 Msa0224600:CDS 20.0%
!! TGTACATATTAAGTCATTAA+GGG - chr2_1:74530080-74530099 Msa0224600:CDS 20.0%
! CAACTTATGATTCATACATA+AGG + chr2_1:74524426-74524445 None:intergenic 25.0%
! GAGTTTATAAAATCAGCTTA+TGG - chr2_1:74524552-74524571 Msa0224600:CDS 25.0%
!! AAGCTATCTTTGAAAACTTA+AGG + chr2_1:74524678-74524697 None:intergenic 25.0%
!!! TTATATAAATAGGCCTTGTT+TGG + chr2_1:74524825-74524844 None:intergenic 25.0%
!! TTTGATTTCATATTCACAAC+TGG - chr2_1:74525439-74525458 Msa0224600:CDS 25.0%
! TTGATTTCATATTCACAACT+GGG - chr2_1:74525440-74525459 Msa0224600:CDS 25.0%
! AAATACTGCTTATAAGTGAT+CGG + chr2_1:74525756-74525775 None:intergenic 25.0%
! GAGTCTATCATATATATGTT+GGG + chr2_1:74525881-74525900 None:intergenic 25.0%
! AGAGTCTATCATATATATGT+TGG + chr2_1:74525882-74525901 None:intergenic 25.0%
!!! GTATGGAGTTTATTTTAACT+TGG - chr2_1:74526069-74526088 Msa0224600:CDS 25.0%
!! CATATTTTATGAAGTTTCGT+TGG + chr2_1:74526199-74526218 None:intergenic 25.0%
!!! TTTGAATTTGATGCTTTTTC+AGG + chr2_1:74526239-74526258 None:intergenic 25.0%
!!! TGAAAAAGCATCAAATTCAA+AGG - chr2_1:74526238-74526257 Msa0224600:CDS 25.0%
!!! GAAAAAGCATCAAATTCAAA+GGG - chr2_1:74526239-74526258 Msa0224600:CDS 25.0%
!!! AAAAAGCATCAAATTCAAAG+GGG - chr2_1:74526240-74526259 Msa0224600:CDS 25.0%
! AACAGAAATTACAGGTTTAA+GGG + chr2_1:74526533-74526552 None:intergenic 25.0%
! AAACAGAAATTACAGGTTTA+AGG + chr2_1:74526534-74526553 None:intergenic 25.0%
! CAAATAGACAGATATTGTTA+AGG + chr2_1:74526837-74526856 None:intergenic 25.0%
!!! AGGATATACTTTGAAATCTA+CGG + chr2_1:74526866-74526885 None:intergenic 25.0%
! TAGATTTCAAAGTATATCCT+GGG - chr2_1:74526866-74526885 Msa0224600:intron 25.0%
!! CCTTAAAATTTGAAATCTGA+GGG + chr2_1:74526932-74526951 None:intergenic 25.0%
!! ACCTTAAAATTTGAAATCTG+AGG + chr2_1:74526933-74526952 None:intergenic 25.0%
!!! TCAAATTTTAAGGTATACCA+AGG - chr2_1:74526939-74526958 Msa0224600:intron 25.0%
!!! CAAATTTTAAGGTATACCAA+GGG - chr2_1:74526940-74526959 Msa0224600:intron 25.0%
!!! AAATTTTAAGGTATACCAAG+GGG - chr2_1:74526941-74526960 Msa0224600:intron 25.0%
! ATGAGATCTCTTACATAATA+AGG + chr2_1:74527087-74527106 None:intergenic 25.0%
! AGTTTGGAAACAAGTTAAAA+AGG + chr2_1:74527299-74527318 None:intergenic 25.0%
! TAAGAAATAAAATATGGGAC+AGG + chr2_1:74527571-74527590 None:intergenic 25.0%
! ACAAAATGCAACATTTATTG+AGG - chr2_1:74527924-74527943 Msa0224600:intron 25.0%
! CAAAATGCAACATTTATTGA+GGG - chr2_1:74527925-74527944 Msa0224600:intron 25.0%
! AAAATGCAACATTTATTGAG+GGG - chr2_1:74527926-74527945 Msa0224600:intron 25.0%
! CAATAGAATAAGTAGGAATA+TGG + chr2_1:74528034-74528053 None:intergenic 25.0%
! CATATTCCTACTTATTCTAT+TGG - chr2_1:74528032-74528051 Msa0224600:intron 25.0%
!! AACATTCAAATAAATGGGTT+GGG + chr2_1:74528168-74528187 None:intergenic 25.0%
! TAACATTCAAATAAATGGGT+TGG + chr2_1:74528169-74528188 None:intergenic 25.0%
! CAGCTAACATTCAAATAAAT+GGG + chr2_1:74528173-74528192 None:intergenic 25.0%
! TCAGCTAACATTCAAATAAA+TGG + chr2_1:74528174-74528193 None:intergenic 25.0%
!! CAAATATGGTTTTCTTTACA+TGG + chr2_1:74528330-74528349 None:intergenic 25.0%
! ACATGTTTAATTGTGTACTT+CGG + chr2_1:74528401-74528420 None:intergenic 25.0%
! CAATTAAACATGTTGTCATT+TGG - chr2_1:74528408-74528427 Msa0224600:CDS 25.0%
! GAAATGCTATGATAATTGAT+TGG + chr2_1:74528911-74528930 None:intergenic 25.0%
!! TGGATTTATTCTTTTCAACA+GGG - chr2_1:74529016-74529035 Msa0224600:intron 25.0%
! TACTAGATATAGGTCAAAAT+TGG - chr2_1:74529362-74529381 Msa0224600:intron 25.0%
! ACTAGATATAGGTCAAAATT+GGG - chr2_1:74529363-74529382 Msa0224600:intron 25.0%
!! TAGTAGAAACTTTAGAAAGT+TGG + chr2_1:74529537-74529556 None:intergenic 25.0%
! ATGAATAATGTTCACTCATA+TGG + chr2_1:74529735-74529754 None:intergenic 25.0%
!!! TATTGTTTATTTTCTAACCC+CGG + chr2_1:74529844-74529863 None:intergenic 25.0%
! TTTGTTTAGCATACAAGTTA+GGG + chr2_1:74529995-74530014 None:intergenic 25.0%
! GTACATATTAAGTCATTAAG+GGG - chr2_1:74530081-74530100 Msa0224600:CDS 25.0%
! TACATATTAAGTCATTAAGG+GGG - chr2_1:74530082-74530101 Msa0224600:CDS 25.0%
! AAAGTTTCTTTCTGTATAGA+TGG - chr2_1:74530117-74530136 Msa0224600:CDS 25.0%
! GGAATTTGAATTTTCGGAAA+TGG + chr2_1:74523803-74523822 None:intergenic 30.0%
! AGGATGGGAATTTGAATTTT+CGG + chr2_1:74523809-74523828 None:intergenic 30.0%
TGAGTGAATTATGATGTGTT+TGG - chr2_1:74524253-74524272 Msa0224600:CDS 30.0%
TAATGAAACTGGATATCACA+AGG + chr2_1:74525070-74525089 None:intergenic 30.0%
!! CCTTGTTTCTATAATGAAAC+TGG + chr2_1:74525081-74525100 None:intergenic 30.0%
CCAGTTTCATTATAGAAACA+AGG - chr2_1:74525078-74525097 Msa0224600:intron 30.0%
TGTTTACTTTCTTGTGTAGA+TGG - chr2_1:74525185-74525204 Msa0224600:intron 30.0%
TCTCATTTGGTCCATATAAA+TGG - chr2_1:74525211-74525230 Msa0224600:intron 30.0%
TCTTTAGGCAACCATTTATA+TGG + chr2_1:74525225-74525244 None:intergenic 30.0%
GATGTTCAAGACAAAACATA+AGG + chr2_1:74525482-74525501 None:intergenic 30.0%
TTGTGTGAATGAACATTGTA+GGG + chr2_1:74525563-74525582 None:intergenic 30.0%
TTTGTGTGAATGAACATTGT+AGG + chr2_1:74525564-74525583 None:intergenic 30.0%
TACAATGTTCATTCACACAA+AGG - chr2_1:74525563-74525582 Msa0224600:intron 30.0%
!! TTCCTTGTCTTACTTGTTTT+GGG - chr2_1:74525640-74525659 Msa0224600:intron 30.0%
ACTTACAAAACCACCTTATA+AGG - chr2_1:74525721-74525740 Msa0224600:intron 30.0%
GTTTGAATAGTGATAGTAAG+TGG + chr2_1:74525986-74526005 None:intergenic 30.0%
!!! GTTTATTTTAACTTGGGCAA+AGG - chr2_1:74526076-74526095 Msa0224600:CDS 30.0%
TATGAAGTTTCGTTGGAATT+TGG + chr2_1:74526192-74526211 None:intergenic 30.0%
ATGCAGAAACTTTATCTACT+AGG + chr2_1:74526411-74526430 None:intergenic 30.0%
ACAGAAATTACAGGTTTAAG+GGG + chr2_1:74526532-74526551 None:intergenic 30.0%
TCAACAGAAACAGAAATTAC+AGG + chr2_1:74526541-74526560 None:intergenic 30.0%
!! GTAATTTCTGTTTCTGTTGA+AGG - chr2_1:74526541-74526560 Msa0224600:CDS 30.0%
TAAAAGCTTAAGATGTTACG+AGG + chr2_1:74526803-74526822 None:intergenic 30.0%
! TCGTAACATCTTAAGCTTTT+AGG - chr2_1:74526802-74526821 Msa0224600:intron 30.0%
!!! TCTTAAGCTTTTAGGATAGT+TGG - chr2_1:74526810-74526829 Msa0224600:intron 30.0%
!! GGATATACTTTGAAATCTAC+GGG + chr2_1:74526865-74526884 None:intergenic 30.0%
GTAGATTTCAAAGTATATCC+TGG - chr2_1:74526865-74526884 Msa0224600:intron 30.0%
! CCCTCAGATTTCAAATTTTA+AGG - chr2_1:74526929-74526948 Msa0224600:intron 30.0%
TAACATCCCACTTCTAAATA+GGG - chr2_1:74526974-74526993 Msa0224600:intron 30.0%
AATAAAGTGACAACGTATGA+GGG + chr2_1:74527230-74527249 None:intergenic 30.0%
!! AGAAAGAGTTTGCTGATATT+TGG + chr2_1:74527489-74527508 None:intergenic 30.0%
CTTTCAAACAAATACTCATC+AGG - chr2_1:74527507-74527526 Msa0224600:intron 30.0%
AAAGACAGAGCCAAAAAAAT+TGG + chr2_1:74527544-74527563 None:intergenic 30.0%
! TGCTTACATTTCTTTTCTGA+TGG + chr2_1:74527607-74527626 None:intergenic 30.0%
TACAAAACTTCTGCCTAATA+GGG + chr2_1:74527637-74527656 None:intergenic 30.0%
ATACAAAACTTCTGCCTAAT+AGG + chr2_1:74527638-74527657 None:intergenic 30.0%
TGCTTTACACTGTTCAAAAT+TGG + chr2_1:74527835-74527854 None:intergenic 30.0%
AACAGTGTAAAGCATGTTTA+TGG - chr2_1:74527841-74527860 Msa0224600:intron 30.0%
!! ATTTTGTATGCCATTTAGCT+TGG + chr2_1:74527911-74527930 None:intergenic 30.0%
AAATGCAACATTTATTGAGG+GGG - chr2_1:74527927-74527946 Msa0224600:intron 30.0%
GGGGATCTTAATAAAATTGA+TGG - chr2_1:74527946-74527965 Msa0224600:intron 30.0%
GAAATAACAATGTCAGGTTT+AGG + chr2_1:74527991-74528010 None:intergenic 30.0%
!! AAACCTGACATTGTTATTTC+AGG - chr2_1:74527991-74528010 Msa0224600:intron 30.0%
AAGTAGGAATATGGAAATGT+AGG + chr2_1:74528025-74528044 None:intergenic 30.0%
CAATGGCAATTTCAACAATT+AGG + chr2_1:74528124-74528143 None:intergenic 30.0%
TCAAGTTCCTCTTAAATCTT+AGG - chr2_1:74528478-74528497 Msa0224600:intron 30.0%
CAAGTTCCTCTTAAATCTTA+GGG - chr2_1:74528479-74528498 Msa0224600:intron 30.0%
AAACCTTTACATTTCAAGGT+TGG - chr2_1:74528777-74528796 Msa0224600:intron 30.0%
AACCTTTACATTTCAAGGTT+GGG - chr2_1:74528778-74528797 Msa0224600:intron 30.0%
ATGTAGCAAAAGAAATGAGA+TGG + chr2_1:74528806-74528825 None:intergenic 30.0%
! TCATTTCTTTTGCTACATCT+GGG - chr2_1:74528808-74528827 Msa0224600:intron 30.0%
! TTGGATGTCTGATGAATTTT+GGG - chr2_1:74528851-74528870 Msa0224600:intron 30.0%
ATGTGAAGTGCAATAATCAA+TGG - chr2_1:74528981-74529000 Msa0224600:intron 30.0%
! CTGGATTTATTCTTTTCAAC+AGG - chr2_1:74529015-74529034 Msa0224600:intron 30.0%
TGAGAATTGTATAATCATGC+TGG + chr2_1:74529124-74529143 None:intergenic 30.0%
! TACACTGATGCAATAGTTTT+GGG + chr2_1:74529455-74529474 None:intergenic 30.0%
! ATTTTGAATGGTAGTAGCAT+TGG - chr2_1:74529482-74529501 Msa0224600:intron 30.0%
GATTCTTGCTTAATTGAAGA+AGG - chr2_1:74529674-74529693 Msa0224600:intron 30.0%
ATCTCATTCTCAGTGAAAAT+TGG + chr2_1:74529917-74529936 None:intergenic 30.0%
TTGTTTAGCATACAAGTTAG+GGG + chr2_1:74529994-74530013 None:intergenic 30.0%
! CTTTGTTTAGCATACAAGTT+AGG + chr2_1:74529996-74530015 None:intergenic 30.0%
TAATATGTACATATCCTGGA+GGG + chr2_1:74530071-74530090 None:intergenic 30.0%
TTAATATGTACATATCCTGG+AGG + chr2_1:74530072-74530091 None:intergenic 30.0%
GACTTAATATGTACATATCC+TGG + chr2_1:74530075-74530094 None:intergenic 30.0%
! TGAATTTTCGGAAATGGAGT+GGG + chr2_1:74523797-74523816 None:intergenic 35.0%
! TTGAATTTTCGGAAATGGAG+TGG + chr2_1:74523798-74523817 None:intergenic 35.0%
!! AATAGGAATTGGAGGTGTTA+GGG + chr2_1:74523929-74523948 None:intergenic 35.0%
!! AAATAGGAATTGGAGGTGTT+AGG + chr2_1:74523930-74523949 None:intergenic 35.0%
TTTAGGGAAATAGGAATTGG+AGG + chr2_1:74523937-74523956 None:intergenic 35.0%
AATTCCTATTTCCCTAAACG+CGG - chr2_1:74523939-74523958 Msa0224600:three_prime_UTR 35.0%
CTATGCAAAGTTACTGATAC+CGG - chr2_1:74524011-74524030 Msa0224600:three_prime_UTR 35.0%
GATTAAAGCTAAAGAGGAAC+AGG - chr2_1:74524226-74524245 Msa0224600:three_prime_UTR 35.0%
CACTTTATAGTTCGTGACAT+AGG - chr2_1:74524465-74524484 Msa0224600:intron 35.0%
TATCTGCATAAGCACTTCTA+AGG - chr2_1:74524519-74524538 Msa0224600:CDS 35.0%
!! GCTGTTTTGAGCTTATCTAA+TGG - chr2_1:74524589-74524608 Msa0224600:intron 35.0%
TAAGTGTTTGTGACACTGTT+TGG - chr2_1:74524613-74524632 Msa0224600:intron 35.0%
AACTACAACTTGTGCTATCA+TGG + chr2_1:74524853-74524872 None:intergenic 35.0%
! AAGGTTTTCTCAGAAAGACT+TGG - chr2_1:74525015-74525034 Msa0224600:intron 35.0%
CAGAAAGACTTGGAATTGAA+TGG - chr2_1:74525025-74525044 Msa0224600:intron 35.0%
TGGATATCACAAGGAACAAT+CGG + chr2_1:74525061-74525080 None:intergenic 35.0%
! TCTCATGCAAATGCATCTTT+TGG - chr2_1:74525137-74525156 Msa0224600:intron 35.0%
GTGTAGATGGAATTCTCATT+TGG - chr2_1:74525198-74525217 Msa0224600:intron 35.0%
ACGAAAGAAATGTTGATGCT+GGG - chr2_1:74525253-74525272 Msa0224600:intron 35.0%
ACAAACTGATCCTGCTAATA+AGG - chr2_1:74525350-74525369 Msa0224600:intron 35.0%
ACATTGCATACCTTATTAGC+AGG + chr2_1:74525363-74525382 None:intergenic 35.0%
ATTTCATATTCACAACTGGG+AGG - chr2_1:74525443-74525462 Msa0224600:CDS 35.0%
TTTGTCTTGAACATCTGAAC+AGG - chr2_1:74525487-74525506 Msa0224600:intron 35.0%
! GTTCCTTGTCTTACTTGTTT+TGG - chr2_1:74525639-74525658 Msa0224600:intron 35.0%
TACCCAAAACAAGTAAGACA+AGG + chr2_1:74525645-74525664 None:intergenic 35.0%
!!! TTACTTGTTTTGGGTACACA+TGG - chr2_1:74525649-74525668 Msa0224600:intron 35.0%
AGTTCTTGCATCTATATTCG+TGG - chr2_1:74525679-74525698 Msa0224600:intron 35.0%
TATTCGTGGACCATAGAATT+TGG - chr2_1:74525693-74525712 Msa0224600:intron 35.0%
TACAAAACCACCTTATAAGG+TGG - chr2_1:74525724-74525743 Msa0224600:intron 35.0%
ACAAAACCACCTTATAAGGT+GGG - chr2_1:74525725-74525744 Msa0224600:intron 35.0%
GAATAGTGATAGTAAGTGGT+GGG + chr2_1:74525982-74526001 None:intergenic 35.0%
TGAATAGTGATAGTAAGTGG+TGG + chr2_1:74525983-74526002 None:intergenic 35.0%
AACCATATCACTATGCAATG+TGG - chr2_1:74526003-74526022 Msa0224600:CDS 35.0%
ACCATATCACTATGCAATGT+GGG - chr2_1:74526004-74526023 Msa0224600:CDS 35.0%
! ATCAATGTTTGAGCCTTATC+CGG + chr2_1:74526040-74526059 None:intergenic 35.0%
ACAAAGTTGACCATTACTTC+AGG + chr2_1:74526355-74526374 None:intergenic 35.0%
AACTTAAGTACCAACCACTT+CGG + chr2_1:74526437-74526456 None:intergenic 35.0%
TTAAGGGGTTTCGAAAGTTA+AGG + chr2_1:74526517-74526536 None:intergenic 35.0%
!! AGCTTAAGTTGATGAATGCA+AGG + chr2_1:74526583-74526602 None:intergenic 35.0%
AGTTGATCTTAACACTGTAG+TGG - chr2_1:74526610-74526629 Msa0224600:intron 35.0%
AGTTTCATTGATCAAGTGTC+AGG - chr2_1:74526633-74526652 Msa0224600:intron 35.0%
TCGTAAAGAATGGGTGTAAA+AGG + chr2_1:74526668-74526687 None:intergenic 35.0%
! TGTCATTTAGACATCCCTAT+GGG + chr2_1:74526762-74526781 None:intergenic 35.0%
! ATGTCATTTAGACATCCCTA+TGG + chr2_1:74526763-74526782 None:intergenic 35.0%
CTAAATGACATGAAGCTATG+TGG - chr2_1:74526772-74526791 Msa0224600:intron 35.0%
TTCAAAGTATATCCTGGGAA+TGG - chr2_1:74526871-74526890 Msa0224600:intron 35.0%
TCAACCAAACTAACAGATTC+GGG + chr2_1:74526909-74526928 None:intergenic 35.0%
GTCAACCAAACTAACAGATT+CGG + chr2_1:74526910-74526929 None:intergenic 35.0%
GTAACATCCCACTTCTAAAT+AGG - chr2_1:74526973-74526992 Msa0224600:intron 35.0%
GAATAAAGTGACAACGTATG+AGG + chr2_1:74527231-74527250 None:intergenic 35.0%
TAAGCAAGACTTTCCCTATT+AGG - chr2_1:74527621-74527640 Msa0224600:intron 35.0%
!! ATTTAGCTTGGCATTAAGTC+GGG + chr2_1:74527899-74527918 None:intergenic 35.0%
!! CATTTAGCTTGGCATTAAGT+CGG + chr2_1:74527900-74527919 None:intergenic 35.0%
GAACCTGAAATAACAATGTC+AGG + chr2_1:74527997-74528016 None:intergenic 35.0%
!! TTCAAATAAATGGGTTGGGT+GGG + chr2_1:74528164-74528183 None:intergenic 35.0%
!! ATTCAAATAAATGGGTTGGG+TGG + chr2_1:74528165-74528184 None:intergenic 35.0%
! TTTAATGGAGGGAGATTTTC+TGG - chr2_1:74528254-74528273 Msa0224600:intron 35.0%
TCAACTATCTGAGTTGTTGA+AGG - chr2_1:74528623-74528642 Msa0224600:CDS 35.0%
!! AGTTGTTGAAGGTTTTGTGT+AGG - chr2_1:74528634-74528653 Msa0224600:CDS 35.0%
! CTCATTTCTTTTGCTACATC+TGG - chr2_1:74528807-74528826 Msa0224600:intron 35.0%
CAAAATTCATCAGACATCCA+AGG + chr2_1:74528852-74528871 None:intergenic 35.0%
! CTTGGATGTCTGATGAATTT+TGG - chr2_1:74528850-74528869 Msa0224600:intron 35.0%
ACAAGCTTGGTACTAGATAT+AGG - chr2_1:74529352-74529371 Msa0224600:intron 35.0%
!! TGGGTCTTCAAGTTGATAAA+TGG - chr2_1:74529382-74529401 Msa0224600:intron 35.0%
!! GGGTCTTCAAGTTGATAAAT+GGG - chr2_1:74529383-74529402 Msa0224600:intron 35.0%
! GTACACTGATGCAATAGTTT+TGG + chr2_1:74529456-74529475 None:intergenic 35.0%
TATTTATGCAGAGCTCTCAA+GGG - chr2_1:74529562-74529581 Msa0224600:intron 35.0%
TAGTTCTTACCTTCCAAATG+CGG - chr2_1:74529591-74529610 Msa0224600:intron 35.0%
AATAGTAATCCGCATTTGGA+AGG + chr2_1:74529603-74529622 None:intergenic 35.0%
AGTGAATAGTAATCCGCATT+TGG + chr2_1:74529607-74529626 None:intergenic 35.0%
GGATATGATCTACTTCATGA+TGG + chr2_1:74529643-74529662 None:intergenic 35.0%
TGCTTAATTGAAGAAGGTTG+AGG - chr2_1:74529680-74529699 Msa0224600:intron 35.0%
TTCACTGAGAATGAGATCAA+AGG - chr2_1:74529920-74529939 Msa0224600:CDS 35.0%
TCACTGAGAATGAGATCAAA+GGG - chr2_1:74529921-74529940 Msa0224600:CDS 35.0%
!!! TTGCATTTTTTTTTCCCTCC+AGG - chr2_1:74530054-74530073 Msa0224600:CDS 35.0%
TATTAAGTCATTAAGGGGGT+TGG - chr2_1:74530086-74530105 Msa0224600:CDS 35.0%
ATTAAGTCATTAAGGGGGTT+GGG - chr2_1:74530087-74530106 Msa0224600:CDS 35.0%
TGTATAGATGGATCCATGTT+TGG - chr2_1:74530129-74530148 Msa0224600:CDS 35.0%
TGGAATGCTGCATCTATATT+TGG - chr2_1:74530167-74530186 Msa0224600:CDS 35.0%
AGAGAGTAGAGAGAGCAAAA+CGG + chr2_1:74523842-74523861 None:intergenic 40.0%
TTTGGGAATTGAAGTTGTGG+TGG + chr2_1:74523898-74523917 None:intergenic 40.0%
!!! GGTTTTGGGAATTGAAGTTG+TGG + chr2_1:74523901-74523920 None:intergenic 40.0%
!! AATTGGAGGTGTTAGGGTTT+GGG + chr2_1:74523923-74523942 None:intergenic 40.0%
GCGTTTAGGGAAATAGGAAT+TGG + chr2_1:74523940-74523959 None:intergenic 40.0%
! ACCTTTGCCTTTAAAAGCGA+GGG + chr2_1:74523991-74524010 None:intergenic 40.0%
GTCACACATGACTACAAAAC+CGG + chr2_1:74524033-74524052 None:intergenic 40.0%
GCATCAACAACATCAAAAGG+AGG + chr2_1:74524143-74524162 None:intergenic 40.0%
CAATGCGGAACATAAACACA+AGG + chr2_1:74524167-74524186 None:intergenic 40.0%
TGTGTTTATGTTCCGCATTG+TGG - chr2_1:74524167-74524186 Msa0224600:three_prime_UTR 40.0%
TGGTTGTAAGACGCAGAATT+TGG - chr2_1:74524190-74524209 Msa0224600:three_prime_UTR 40.0%
GGCTCAGATTAAAGCTAAAG+AGG - chr2_1:74524220-74524239 Msa0224600:three_prime_UTR 40.0%
! TATAGCATAAGAGCGCATCA+TGG + chr2_1:74524780-74524799 None:intergenic 40.0%
ATATAAACAGGTCCGTGACT+TGG - chr2_1:74524979-74524998 Msa0224600:intron 40.0%
CAACATGTATGACCAAGTCA+CGG + chr2_1:74524994-74525013 None:intergenic 40.0%
ACTTGGTCATACATGTTGGA+AGG - chr2_1:74524996-74525015 Msa0224600:intron 40.0%
CACGAAAGAAATGTTGATGC+TGG - chr2_1:74525252-74525271 Msa0224600:intron 40.0%
GGGAGTGAAAATTATGCACT+TGG - chr2_1:74525273-74525292 Msa0224600:intron 40.0%
AACATCTGAACAGGTTCTTG+CGG - chr2_1:74525496-74525515 Msa0224600:intron 40.0%
TTGCGGCTATACAAGAATGT+TGG - chr2_1:74525513-74525532 Msa0224600:intron 40.0%
AAGCATTTGATGCTGAGAAG+TGG - chr2_1:74525593-74525612 Msa0224600:intron 40.0%
ATTTGATGCTGAGAAGTGGA+AGG - chr2_1:74525597-74525616 Msa0224600:intron 40.0%
TCGCACATTGGATAGTGATA+TGG + chr2_1:74525782-74525801 None:intergenic 40.0%
TGACCTAGGTGACTCAATTA+CGG - chr2_1:74525851-74525870 Msa0224600:intron 40.0%
! AAAGCTGGCTTATATGGTGA+TGG - chr2_1:74525953-74525972 Msa0224600:CDS 40.0%
CCATATCACTATGCAATGTG+GGG - chr2_1:74526005-74526024 Msa0224600:CDS 40.0%
!!! TTTTAACTTGGGCAAAGGTG+TGG - chr2_1:74526081-74526100 Msa0224600:CDS 40.0%
!! TTTAACTTGGGCAAAGGTGT+GGG - chr2_1:74526082-74526101 Msa0224600:CDS 40.0%
!! TGTTCTAGGGATGTAATGAC+TGG - chr2_1:74526325-74526344 Msa0224600:intron 40.0%
TACTAGGACCTTCAGCAAAT+CGG + chr2_1:74526395-74526414 None:intergenic 40.0%
ACTTAAGTACCAACCACTTC+GGG + chr2_1:74526436-74526455 None:intergenic 40.0%
ACATGTGAAGAAGCTAAAGC+AGG + chr2_1:74526487-74526506 None:intergenic 40.0%
CAAAAAGGCTATAGCCCATA+GGG - chr2_1:74526745-74526764 Msa0224600:intron 40.0%
TAACAGATTCGGGATGTTAC+AGG + chr2_1:74526899-74526918 None:intergenic 40.0%
ACATCCCGAATCTGTTAGTT+TGG - chr2_1:74526902-74526921 Msa0224600:intron 40.0%
! TTTAAGGTATACCAAGGGGA+TGG - chr2_1:74526945-74526964 Msa0224600:intron 40.0%
ATCCCACTTCTAAATAGGGA+GGG - chr2_1:74526978-74526997 Msa0224600:intron 40.0%
! TAGTTTGTCTAGAAGACGCT+TGG - chr2_1:74527040-74527059 Msa0224600:intron 40.0%
TTTATGGATGGGTGAACTTC+AGG - chr2_1:74527131-74527150 Msa0224600:intron 40.0%
CACACAAAAAGAGACAGTTG+GGG + chr2_1:74527263-74527282 None:intergenic 40.0%
GCACACAAAAAGAGACAGTT+GGG + chr2_1:74527264-74527283 None:intergenic 40.0%
CATGCAGAGAAGGAATTTAC+TGG + chr2_1:74527345-74527364 None:intergenic 40.0%
TCCTTCTCTGCATGAATGAT+AGG - chr2_1:74527351-74527370 Msa0224600:intron 40.0%
ACCTATCATTCATGCAGAGA+AGG + chr2_1:74527355-74527374 None:intergenic 40.0%
!! TCTGTTGGTAACACATCTGT+TGG - chr2_1:74527400-74527419 Msa0224600:intron 40.0%
!! CTGTTGGTAACACATCTGTT+GGG - chr2_1:74527401-74527420 Msa0224600:intron 40.0%
!! TGTTGGTAACACATCTGTTG+GGG - chr2_1:74527402-74527421 Msa0224600:intron 40.0%
AGGAGGAATACACTTTGCAT+GGG - chr2_1:74527425-74527444 Msa0224600:intron 40.0%
AGCATTACAGAGACCTTAAG+AGG - chr2_1:74527454-74527473 Msa0224600:intron 40.0%
GCATTACAGAGACCTTAAGA+GGG - chr2_1:74527455-74527474 Msa0224600:intron 40.0%
TTGGAATGTAAGCCCTCTTA+AGG + chr2_1:74527470-74527489 None:intergenic 40.0%
AAACTCATCGAAGAATGTGC+TGG - chr2_1:74527658-74527677 Msa0224600:intron 40.0%
! TTTTGCAAGTGTCAGACCTA+TGG + chr2_1:74527737-74527756 None:intergenic 40.0%
CGACTTAATGCCAAGCTAAA+TGG - chr2_1:74527898-74527917 Msa0224600:intron 40.0%
GGGAAAGAAGTGAACAACAA+TGG + chr2_1:74528141-74528160 None:intergenic 40.0%
!! TCAAATAAATGGGTTGGGTG+GGG + chr2_1:74528163-74528182 None:intergenic 40.0%
CATGAAACATACACTATGCG+AGG + chr2_1:74528507-74528526 None:intergenic 40.0%
GACCTTGATTATCTCTGTCA+TGG - chr2_1:74528549-74528568 Msa0224600:intron 40.0%
CACCATGACAGAGATAATCA+AGG + chr2_1:74528554-74528573 None:intergenic 40.0%
TGATTATCTCTGTCATGGTG+TGG - chr2_1:74528554-74528573 Msa0224600:intron 40.0%
TAGGCAGAGCTGAATATAGA+AGG - chr2_1:74528653-74528672 Msa0224600:CDS 40.0%
TGCCCAACCTTGAAATGTAA+AGG + chr2_1:74528783-74528802 None:intergenic 40.0%
CTACTTTGCAGTTTGAACCT+TGG - chr2_1:74528832-74528851 Msa0224600:intron 40.0%
ATCAATGGATAACTGCACTC+TGG - chr2_1:74528996-74529015 Msa0224600:intron 40.0%
AATAGAAACACAGGGCAAGA+GGG + chr2_1:74529095-74529114 None:intergenic 40.0%
GGATGCTGAATAGAAACACA+GGG + chr2_1:74529103-74529122 None:intergenic 40.0%
TGGATGCTGAATAGAAACAC+AGG + chr2_1:74529104-74529123 None:intergenic 40.0%
GCACACAAACAATACAACTG+TGG + chr2_1:74529268-74529287 None:intergenic 40.0%
!! CTGTTTCTGCTATGTCTTTC+AGG - chr2_1:74529324-74529343 Msa0224600:intron 40.0%
CTTTCAGGAGATAACAAGCT+TGG - chr2_1:74529339-74529358 Msa0224600:intron 40.0%
!!! CTGATGCAATAGTTTTGGGT+GGG + chr2_1:74529451-74529470 None:intergenic 40.0%
!!! ACTGATGCAATAGTTTTGGG+TGG + chr2_1:74529452-74529471 None:intergenic 40.0%
CTATTTATGCAGAGCTCTCA+AGG - chr2_1:74529561-74529580 Msa0224600:intron 40.0%
AGCAAGAATCTGACAAGTGT+AGG + chr2_1:74529664-74529683 None:intergenic 40.0%
TGCATGAAACTTCAGATGCT+TGG - chr2_1:74529709-74529728 Msa0224600:intron 40.0%
CACTGAGAATGAGATCAAAG+GGG - chr2_1:74529922-74529941 Msa0224600:CDS 40.0%
GGAATTGAAGTTGTGGTGGT+TGG + chr2_1:74523894-74523913 None:intergenic 45.0%
!! GTGTTAGGGTTTGGGGTTTT+GGG + chr2_1:74523915-74523934 None:intergenic 45.0%
!! ATTGGAGGTGTTAGGGTTTG+GGG + chr2_1:74523922-74523941 None:intergenic 45.0%
!! GAATTGGAGGTGTTAGGGTT+TGG + chr2_1:74523924-74523943 None:intergenic 45.0%
!! TGCGAATCCCTCGCTTTTAA+AGG - chr2_1:74523981-74524000 Msa0224600:three_prime_UTR 45.0%
!! TCCCTCGCTTTTAAAGGCAA+AGG - chr2_1:74523987-74524006 Msa0224600:three_prime_UTR 45.0%
! GACCTTTGCCTTTAAAAGCG+AGG + chr2_1:74523992-74524011 None:intergenic 45.0%
TTCCCGGTGAACGTTTCATT+GGG - chr2_1:74524060-74524079 Msa0224600:three_prime_UTR 45.0%
TGGGAGGATTACTCGAAAGA+AGG - chr2_1:74524079-74524098 Msa0224600:three_prime_UTR 45.0%
GGGAGGATTACTCGAAAGAA+GGG - chr2_1:74524080-74524099 Msa0224600:three_prime_UTR 45.0%
GGAGGATTACTCGAAAGAAG+GGG - chr2_1:74524081-74524100 Msa0224600:three_prime_UTR 45.0%
TCGAAAGAAGGGGAATTACG+CGG - chr2_1:74524091-74524110 Msa0224600:three_prime_UTR 45.0%
GGCGCATCAACAACATCAAA+AGG + chr2_1:74524146-74524165 None:intergenic 45.0%
GTTTATGTTCCGCATTGTGG+TGG - chr2_1:74524170-74524189 Msa0224600:three_prime_UTR 45.0%
GTCTTACAACCACCACAATG+CGG + chr2_1:74524182-74524201 None:intergenic 45.0%
! GACGCAGAATTTGGCTTATC+AGG - chr2_1:74524199-74524218 Msa0224600:three_prime_UTR 45.0%
TTCGTGACATAGGACATGCT+TGG - chr2_1:74524475-74524494 Msa0224600:intron 45.0%
GTGTTTGTGACACTGTTTGG+AGG - chr2_1:74524616-74524635 Msa0224600:intron 45.0%
!! CGTGACTTGGTCATACATGT+TGG - chr2_1:74524992-74525011 Msa0224600:intron 45.0%
TGTTGGAGAGATCCACAACT+TGG - chr2_1:74525530-74525549 Msa0224600:intron 45.0%
TAGGGTGAGAAACCAAGTTG+TGG + chr2_1:74525545-74525564 None:intergenic 45.0%
GCATTTCCCACCTTATAAGG+TGG + chr2_1:74525734-74525753 None:intergenic 45.0%
TCGGCATTTCCCACCTTATA+AGG + chr2_1:74525737-74525756 None:intergenic 45.0%
GACCTAGGTGACTCAATTAC+GGG - chr2_1:74525852-74525871 Msa0224600:intron 45.0%
! CCATATAAGCCAGCTTTGTG+CGG + chr2_1:74525950-74525969 None:intergenic 45.0%
CCCCACATTGCATAGTGATA+TGG + chr2_1:74526008-74526027 None:intergenic 45.0%
! TTTGAGCCTTATCCGGTGTA+TGG + chr2_1:74526033-74526052 None:intergenic 45.0%
ACTAGGACCTTCAGCAAATC+GGG + chr2_1:74526394-74526413 None:intergenic 45.0%
AGTTTCTGCATTTCCCGAAG+TGG - chr2_1:74526420-74526439 Msa0224600:intron 45.0%
!! CCTATGGGCTATAGCCTTTT+TGG + chr2_1:74526747-74526766 None:intergenic 45.0%
CCAAAAAGGCTATAGCCCAT+AGG - chr2_1:74526744-74526763 Msa0224600:intron 45.0%
ATGTTACAGGATCCATTCCC+AGG + chr2_1:74526886-74526905 None:intergenic 45.0%
TGTTACAGAATCCATCCCCT+TGG + chr2_1:74526959-74526978 None:intergenic 45.0%
CATCCCACTTCTAAATAGGG+AGG - chr2_1:74526977-74526996 Msa0224600:intron 45.0%
TCCCACTTCTAAATAGGGAG+GGG - chr2_1:74526979-74526998 Msa0224600:intron 45.0%
TCCCCTCCCTATTTAGAAGT+GGG + chr2_1:74526983-74527002 None:intergenic 45.0%
ATCCCCTCCCTATTTAGAAG+TGG + chr2_1:74526984-74527003 None:intergenic 45.0%
ACTTCTAAATAGGGAGGGGA+TGG - chr2_1:74526983-74527002 Msa0224600:intron 45.0%
CGCACACAAAAAGAGACAGT+TGG + chr2_1:74527265-74527284 None:intergenic 45.0%
! ACTGTCTCTTTTTGTGTGCG+TGG - chr2_1:74527265-74527284 Msa0224600:intron 45.0%
GAGGAGGAATACACTTTGCA+TGG - chr2_1:74527424-74527443 Msa0224600:intron 45.0%
! GTTGTCCTTGACCTGTTTTG+TGG - chr2_1:74527703-74527722 Msa0224600:intron 45.0%
CTGTTCCACAAAACAGGTCA+AGG + chr2_1:74527711-74527730 None:intergenic 45.0%
! CTTGACCTGTTTTGTGGAAC+AGG - chr2_1:74527709-74527728 Msa0224600:intron 45.0%
! TTTTGTGGAACAGGCACCAT+AGG - chr2_1:74527718-74527737 Msa0224600:intron 45.0%
!! AAATAAATGGGTTGGGTGGG+GGG + chr2_1:74528161-74528180 None:intergenic 45.0%
!! CAAATAAATGGGTTGGGTGG+GGG + chr2_1:74528162-74528181 None:intergenic 45.0%
ACTCGATATGAGGTGTGTGT+GGG + chr2_1:74528718-74528737 None:intergenic 45.0%
AGGCAAACACACTCGATATG+AGG + chr2_1:74528728-74528747 None:intergenic 45.0%
TATCGAGTGTGTTTGCCTTC+TGG - chr2_1:74528730-74528749 Msa0224600:intron 45.0%
CAGATCAACAAAGCTCCAGA+AGG + chr2_1:74528748-74528767 None:intergenic 45.0%
GAATAGAAACACAGGGCAAG+AGG + chr2_1:74529096-74529115 None:intergenic 45.0%
!! TAGCATTGGCAAAGCATGCA+TGG - chr2_1:74529496-74529515 Msa0224600:intron 45.0%
! ATTAAGTGCTGCTGTCATGC+CGG - chr2_1:74529822-74529841 Msa0224600:intron 45.0%
GTAAGAGTCATGTCTGCTTC+CGG + chr2_1:74529963-74529982 None:intergenic 45.0%
TCATTAAGGGGGTTGGGATT+TGG - chr2_1:74530093-74530112 Msa0224600:CDS 45.0%
CATTAAGGGGGTTGGGATTT+GGG - chr2_1:74530094-74530113 Msa0224600:CDS 45.0%
TCCATGTTTGGTAGAAGAGC+TGG - chr2_1:74530141-74530160 Msa0224600:CDS 45.0%
CCATGTTTGGTAGAAGAGCT+GGG - chr2_1:74530142-74530161 Msa0224600:CDS 45.0%
! GGAGTGGGAGTGTGTTTGTT+AGG + chr2_1:74523782-74523801 None:intergenic 50.0%
GAGAGAGCAAAACGGTGAGA+GGG + chr2_1:74523834-74523853 None:intergenic 50.0%
AGAGAGAGCAAAACGGTGAG+AGG + chr2_1:74523835-74523854 None:intergenic 50.0%
!! TTGGTTCTGGTTGTGGTTCG+GGG + chr2_1:74523875-74523894 None:intergenic 50.0%
!! GTTGGTTCTGGTTGTGGTTC+GGG + chr2_1:74523876-74523895 None:intergenic 50.0%
!! GGTTGGTTCTGGTTGTGGTT+CGG + chr2_1:74523877-74523896 None:intergenic 50.0%
! GAAGTTGTGGTGGTTGGTTC+TGG + chr2_1:74523888-74523907 None:intergenic 50.0%
!! GGTGTTAGGGTTTGGGGTTT+TGG + chr2_1:74523916-74523935 None:intergenic 50.0%
TTGGCCGCGTTTAGGGAAAT+AGG + chr2_1:74523946-74523965 None:intergenic 50.0%
GGATTCGCAGAGTAGTTCGA+GGG + chr2_1:74523970-74523989 None:intergenic 50.0%
CTTCCCGGTGAACGTTTCAT+TGG - chr2_1:74524059-74524078 Msa0224600:three_prime_UTR 50.0%
CTCCCAATGAAACGTTCACC+GGG + chr2_1:74524065-74524084 None:intergenic 50.0%
CCTCCCAATGAAACGTTCAC+CGG + chr2_1:74524066-74524085 None:intergenic 50.0%
AAAGAAGGGGAATTACGCGG+AGG - chr2_1:74524094-74524113 Msa0224600:three_prime_UTR 50.0%
GAATTACGCGGAGGCTACTA+AGG - chr2_1:74524103-74524122 Msa0224600:three_prime_UTR 50.0%
CTTTCGTGCAGCGACTCTTT+AGG + chr2_1:74525240-74525259 None:intergenic 50.0%
GCACTTGGATTGCATGTTCC+TGG - chr2_1:74525288-74525307 Msa0224600:intron 50.0%
! GTGTGTTGAGTGTCGCACAT+TGG + chr2_1:74525794-74525813 None:intergenic 50.0%
CACCCGTAATTGAGTCACCT+AGG + chr2_1:74525857-74525876 None:intergenic 50.0%
GTGCGGTTGAGTTAGGCATT+AGG + chr2_1:74525933-74525952 None:intergenic 50.0%
! CAGCTTTGTGCGGTTGAGTT+AGG + chr2_1:74525940-74525959 None:intergenic 50.0%
CTAACTCAACCGCACAAAGC+TGG - chr2_1:74525938-74525957 Msa0224600:CDS 50.0%
! CCGCACAAAGCTGGCTTATA+TGG - chr2_1:74525947-74525966 Msa0224600:CDS 50.0%
CAATGTGGGGTTCCATACAC+CGG - chr2_1:74526018-74526037 Msa0224600:CDS 50.0%
!! GACTGGTCTGCCTGAAGTAA+TGG - chr2_1:74526342-74526361 Msa0224600:intron 50.0%
CAAATCGGGCTTGTAGGAAG+AGG + chr2_1:74526380-74526399 None:intergenic 50.0%
CTTCAGCAAATCGGGCTTGT+AGG + chr2_1:74526386-74526405 None:intergenic 50.0%
!! CTACAAGCCCGATTTGCTGA+AGG - chr2_1:74526384-74526403 Msa0224600:intron 50.0%
TCTGCATTTCCCGAAGTGGT+TGG - chr2_1:74526424-74526443 Msa0224600:CDS 50.0%
!!! CTTTTTGGCTTGGAGCATGG+AGG + chr2_1:74526732-74526751 None:intergenic 50.0%
CTCCATGCTCCAAGCCAAAA+AGG - chr2_1:74526730-74526749 Msa0224600:intron 50.0%
!!! AGCCTTTTTGGCTTGGAGCA+TGG + chr2_1:74526735-74526754 None:intergenic 50.0%
!!! GGGCTATAGCCTTTTTGGCT+TGG + chr2_1:74526742-74526761 None:intergenic 50.0%
TGGTAACACATCTGTTGGGG+AGG - chr2_1:74527405-74527424 Msa0224600:intron 50.0%
TAACACATCTGTTGGGGAGG+AGG - chr2_1:74527408-74527427 Msa0224600:intron 50.0%
! GAAGAATGTGCTGGCATCAG+AGG - chr2_1:74527667-74527686 Msa0224600:intron 50.0%
TGGTGCCTGTTCCACAAAAC+AGG + chr2_1:74527717-74527736 None:intergenic 50.0%
ATTAAGTCGGGCATCTGCGA+TGG + chr2_1:74527887-74527906 None:intergenic 50.0%
TCAGCTTCATGTGCATCCCT+GGG + chr2_1:74528458-74528477 None:intergenic 50.0%
ATCAGCTTCATGTGCATCCC+TGG + chr2_1:74528459-74528478 None:intergenic 50.0%
! GAGGCGCCCTAAGATTTAAG+AGG + chr2_1:74528488-74528507 None:intergenic 50.0%
GGAACATGTCAACTGGCTGT+AGG + chr2_1:74528697-74528716 None:intergenic 50.0%
GTGTGTGGGAACATGTCAAC+TGG + chr2_1:74528704-74528723 None:intergenic 50.0%
CACTCGATATGAGGTGTGTG+TGG + chr2_1:74528719-74528738 None:intergenic 50.0%
ATGCTTTCACGCTGCAAGGT+TGG - chr2_1:74529413-74529432 Msa0224600:intron 50.0%
TATGCAGAGCTCTCAAGGGT+TGG - chr2_1:74529566-74529585 Msa0224600:intron 50.0%
! TTAAGTGCTGCTGTCATGCC+GGG - chr2_1:74529823-74529842 Msa0224600:intron 50.0%
! GGGGTACTACTAGCTCAAAC+CGG - chr2_1:74529941-74529960 Msa0224600:CDS 50.0%
CCCAGCTCTTCTACCAAACA+TGG + chr2_1:74530145-74530164 None:intergenic 50.0%
TTTGGTAGAAGAGCTGGGTC+TGG - chr2_1:74530147-74530166 Msa0224600:CDS 50.0%
AACGGTGAGAGGGAGAGGAT+GGG + chr2_1:74523824-74523843 None:intergenic 55.0%
AAACGGTGAGAGGGAGAGGA+TGG + chr2_1:74523825-74523844 None:intergenic 55.0%
AGCAAAACGGTGAGAGGGAG+AGG + chr2_1:74523829-74523848 None:intergenic 55.0%
! TTCTGGTTGTGGTTCGGGGA+GGG + chr2_1:74523871-74523890 None:intergenic 55.0%
!! GTGGTGGTTGGTTCTGGTTG+TGG + chr2_1:74523882-74523901 None:intergenic 55.0%
CGCAGAGTAGTTCGAGGGTT+TGG + chr2_1:74523965-74523984 None:intergenic 55.0%
GGGATTCGCAGAGTAGTTCG+AGG + chr2_1:74523971-74523990 None:intergenic 55.0%
ATGTGTGACCGTGCACTTCC+CGG - chr2_1:74524044-74524063 Msa0224600:three_prime_UTR 55.0%
! AACGTTCACCGGGAAGTGCA+CGG + chr2_1:74524055-74524074 None:intergenic 55.0%
CCGGTGAACGTTTCATTGGG+AGG - chr2_1:74524063-74524082 Msa0224600:three_prime_UTR 55.0%
CACCTAGGTCACACTCAAGC+CGG + chr2_1:74525842-74525861 None:intergenic 55.0%
GGGGTTCCATACACCGGATA+AGG - chr2_1:74526024-74526043 Msa0224600:CDS 55.0%
ATAGGGAGGGGATGGAACTG+AGG - chr2_1:74526991-74527010 Msa0224600:intron 55.0%
! TGTGCTGGCATCAGAGGAGA+TGG - chr2_1:74527673-74527692 Msa0224600:intron 55.0%
TGGGCGGTTGGGATCTGTAT+TGG + chr2_1:74528439-74528458 None:intergenic 55.0%
AATACAGATCCCAACCGCCC+AGG - chr2_1:74528438-74528457 Msa0224600:intron 55.0%
ATACAGATCCCAACCGCCCA+GGG - chr2_1:74528439-74528458 Msa0224600:intron 55.0%
AGGTCACGTGCACATGTAGC+AGG + chr2_1:74528534-74528553 None:intergenic 55.0%
GCACATGCTTTCACGCTGCA+AGG - chr2_1:74529409-74529428 Msa0224600:intron 55.0%
! TAAGTGCTGCTGTCATGCCG+GGG - chr2_1:74529824-74529843 Msa0224600:intron 55.0%
! GTTCTGGTTGTGGTTCGGGG+AGG + chr2_1:74523872-74523891 None:intergenic 60.0%
CGAGGGTTTGGCCGCGTTTA+GGG + chr2_1:74523953-74523972 None:intergenic 60.0%
TCGAGGGTTTGGCCGCGTTT+AGG + chr2_1:74523954-74523973 None:intergenic 60.0%
AACACACACCTCAGACGCCC+AGG - chr2_1:74525807-74525826 Msa0224600:intron 60.0%
TATTCCTGCCTGGGCGTCTG+AGG + chr2_1:74525818-74525837 None:intergenic 60.0%
CAAGCCGGCTATTCCTGCCT+GGG + chr2_1:74525827-74525846 None:intergenic 60.0%
TCAAGCCGGCTATTCCTGCC+TGG + chr2_1:74525828-74525847 None:intergenic 60.0%
!! AGCCGGCTTGAGTGTGACCT+AGG - chr2_1:74525837-74525856 Msa0224600:intron 60.0%
ATGTGCATCCCTGGGCGGTT+GGG + chr2_1:74528450-74528469 None:intergenic 60.0%
GCTTCATGTGCATCCCTGGG+CGG + chr2_1:74528455-74528474 None:intergenic 60.0%
GACGCCCAGGCAGGAATAGC+CGG - chr2_1:74525820-74525839 Msa0224600:intron 65.0%
CGGGCATCTGCGATGGCTTG+AGG + chr2_1:74527880-74527899 None:intergenic 65.0%
CATGTGCATCCCTGGGCGGT+TGG + chr2_1:74528451-74528470 None:intergenic 65.0%
CACACCTCAGACGCCCAGGC+AGG - chr2_1:74525811-74525830 Msa0224600:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 74523759 74530190 74523759 ID=Msa0224600;Name=Msa0224600
chr2_1 mRNA 74523759 74530190 74523759 ID=Msa0224600-mRNA-1;Parent=Msa0224600;Name=Msa0224600-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.77|0.9|1|0.88|0.9|10|490|511
chr2_1 exon 74523759 74524376 74523759 ID=Msa0224600-mRNA-1:exon:22121;Parent=Msa0224600-mRNA-1
chr2_1 exon 74524519 74524603 74524519 ID=Msa0224600-mRNA-1:exon:22120;Parent=Msa0224600-mRNA-1
chr2_1 exon 74525374 74525504 74525374 ID=Msa0224600-mRNA-1:exon:22119;Parent=Msa0224600-mRNA-1
chr2_1 exon 74525937 74526103 74525937 ID=Msa0224600-mRNA-1:exon:22118;Parent=Msa0224600-mRNA-1
chr2_1 exon 74526191 74526306 74526191 ID=Msa0224600-mRNA-1:exon:22117;Parent=Msa0224600-mRNA-1
chr2_1 exon 74526421 74526576 74526421 ID=Msa0224600-mRNA-1:exon:22116;Parent=Msa0224600-mRNA-1
chr2_1 exon 74527508 74527616 74527508 ID=Msa0224600-mRNA-1:exon:22115;Parent=Msa0224600-mRNA-1
chr2_1 exon 74528331 74528440 74528331 ID=Msa0224600-mRNA-1:exon:22114;Parent=Msa0224600-mRNA-1
chr2_1 exon 74528578 74528745 74528578 ID=Msa0224600-mRNA-1:exon:22113;Parent=Msa0224600-mRNA-1
chr2_1 exon 74529825 74530190 74529825 ID=Msa0224600-mRNA-1:exon:22112;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74529825 74530190 74529825 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74528578 74528745 74528578 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74528331 74528440 74528331 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74527508 74527616 74527508 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74526421 74526576 74526421 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74526191 74526306 74526191 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74525937 74526103 74525937 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74525374 74525504 74525374 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74524519 74524603 74524519 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 CDS 74524249 74524376 74524249 ID=Msa0224600-mRNA-1:cds;Parent=Msa0224600-mRNA-1
chr2_1 three_prime_UTR 74523759 74524248 74523759 ID=Msa0224600-mRNA-1:three_prime_utr;Parent=Msa0224600-mRNA-1
Gene Sequence

>Msa0224600

ATGACAAGAACAATTTCAAACCTAACAAACACACTCCCACTCCATTTCCGAAAATTCAAATTCCCATCCTCTCCCTCTCACCGTTTTGCTCTCTCTACTCTCTCATGTTCCCTCCCCGAACCACAACCAGAACCAACCACCACAACTTCAATTCCCAAAACCCCAAACCCTAACACCTCCAATTCCTATTTCCCTAAACGCGGCCAAACCCTCGAACTACTCTGCGAATCCCTCGCTTTTAAAGGCAAAGGTCTATGCAAAGTTACTGATACCGGTTTTGTAGTCATGTGTGACCGTGCACTTCCCGGTGAACGTTTCATTGGGAGGATTACTCGAAAGAAGGGGAATTACGCGGAGGCTACTAAGATGGAATTCTCATTTGGTCCATATAAATGGTTGCCTAAAGAGTCGCTGCACGAAAGAAATGTTGATGCTGGGAGTGAAAATTATGCACTTGGATTGCATGTTCCTGGTTTTTTTGATAAAATTATAAATGTTGAAAAGTGCTTACTACAAACTGATCCTGCTAATAAGGTTCTTGCGGCTATACAAGAATGTTGGAGAGATCCACAACTTGGTTTCTCACCCTACAATGTTCATTCACACAAAGGATTTCTTAAGCATTTGATGCTGAGAAGTGGAAGGGATGTAATGACTGGTCTGCCTGAAGTAATGGTCAACTTTGTGACCTCTTCCTACAAGCCCGATTTGCTGAAGGTCCTAGTAGATAAAGTTTCTGCATTTCCCGAAGTGGTAAGCATCATGAATAATGTAAATACTTCTGTTGGTAACACATCTGTTGGGGAGGAGGAATACACTTTGCATGGGAAATCTAGCATTACAGAGACCTTAAGAGGGCTTACATTCCAAATATCAGCAAACTCTTTCTTTCAAACAAATACTCATCAGGCAGAAGTTTTGTATAAACTCATCGAAGAATGTGCTGGCATCAGAGGAGATGGCTCAGAAGTTGTCCTTGACCTGTTTTGTGGAACAGGCACCATAGGTCTGACACTTGCAAAAAGTGTAAAGCATGTTTATGGCTATGAAGTTGTTCCTCAAGCCATCGCAGATGCCCGACTTAATGCCAAGCTAAATGGCATACAAAATGCAACATTTATTGAGGGGGATCTTAATAAAATTGATGGAAATTTCGGGAAGAATATTCCTAAACCTGACATTGTTATTTCAGATCCCAACCGCCCAGGGATGCACATGAAGCTGATCAAGTTCCTCTTAAATCTTAGGGCGCCTCGCATAGTGTATGTTTCATGCAATCCTGCTACATGTGCACGTGACCTTGATTATCTCTGTCATGGTGTGGAGATAACAAGCTTGGTACTAGATATAGGTCAAAATTGGGTCTTCAAGTTGATAAATGGGAAAGCACATGCTTTCACGCTGCAAGAGCTCTCAAGGGTTGGATTAGTTCTTACCTTCCAAATGCGGATTACTATTCACTTCATGCGACTTGTCCATCATGAAGTAGATCATATCCTACACTTGTCAGATTCTTGCTTAATTGAAGAAGGTTGA

Protein sequence

>Msa0224600

MTRTISNLTNTLPLHFRKFKFPSSPSHRFALSTLSCSLPEPQPEPTTTTSIPKTPNPNTSNSYFPKRGQTLELLCESLAFKGKGLCKVTDTGFVVMCDRALPGERFIGRITRKKGNYAEATKMEFSFGPYKWLPKESLHERNVDAGSENYALGLHVPGFFDKIINVEKCLLQTDPANKVLAAIQECWRDPQLGFSPYNVHSHKGFLKHLMLRSGRDVMTGLPEVMVNFVTSSYKPDLLKVLVDKVSAFPEVVSIMNNVNTSVGNTSVGEEEYTLHGKSSITETLRGLTFQISANSFFQTNTHQAEVLYKLIEECAGIRGDGSEVVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAIADARLNAKLNGIQNATFIEGDLNKIDGNFGKNIPKPDIVISDPNRPGMHMKLIKFLLNLRAPRIVYVSCNPATCARDLDYLCHGVEITSLVLDIGQNWVFKLINGKAHAFTLQELSRVGLVLTFQMRITIHFMRLVHHEVDHILHLSDSCLIEEG*