AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0712070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712070 MtrunA17_Chr5g0396481 95.894 755 9 3 7 740 1 754 0.0 1457
Msa0712070 MtrunA17_Chr4g0046081 38.585 311 189 1 79 389 81 389 8.38e-61 210
Msa0712070 MtrunA17_Chr2g0283351 37.463 339 210 1 51 389 55 391 8.18e-57 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712070 AT1G08520.1 83.772 684 90 2 77 740 78 760 0.0 1079
Msa0712070 AT4G18480.1 36.986 365 221 3 26 389 37 393 3.61e-61 212
Msa0712070 AT5G45930.1 38.012 342 208 2 45 385 45 383 6.08e-61 211

Find 204 sgRNAs with CRISPR-Local

Find 845 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGTTCTTCATTGGATTCT+TGG 0.130094 5_1:+3909284 None:intergenic
TAGAAATAAGATTCCAAAAT+TGG 0.134481 5_1:-3904999 Msa0712070:three_prime_UTR
TTCCCTCTTGCTGCTGTTAT+TGG 0.145624 5_1:-3917338 Msa0712070:CDS
AATTCTTGTGATGTAGGTTT+AGG 0.198528 5_1:+3906026 None:intergenic
TTCTTCATTCTGTTCTTCAT+TGG 0.223207 5_1:+3909276 None:intergenic
CTGAAAATGTCTAGGCTGTT+AGG 0.234330 5_1:-3906175 Msa0712070:intron
TTAGTCCGTATACCCAATTT+TGG 0.236823 5_1:+3904986 None:intergenic
TGGAATTGCGACAGAATTTC+AGG 0.241802 5_1:-3914938 Msa0712070:CDS
CTCCTTCAGTCAATACATTA+AGG 0.244704 5_1:+3915688 None:intergenic
TGTTGATGAAATTAATCTTT+TGG 0.288162 5_1:-3915733 Msa0712070:CDS
GATAAGGTGCAGCAGCTCTA+AGG 0.296257 5_1:+3908428 None:intergenic
AGAACCCTCGTCAGGGTTAT+AGG 0.296595 5_1:+3915602 None:intergenic
CTGTGGCGAAGTATTTAAAA+TGG 0.300420 5_1:-3914911 Msa0712070:CDS
AACCAGTGACCTTACTCTTC+TGG 0.303250 5_1:+3916609 None:intergenic
ATGAAAATAGAGAGTGGAAT+TGG 0.318877 5_1:+3917519 None:intergenic
CTTCGCGCTCAATCTGAAAA+TGG 0.319522 5_1:-3917428 Msa0712070:CDS
CACGGCGCCTCTGTGCTTGT+TGG 0.321269 5_1:+3908856 None:intergenic
ATTCTTGTGATGTAGGTTTA+GGG 0.322239 5_1:+3906027 None:intergenic
AAGCTCGATGCTAGTACTTA+TGG 0.326021 5_1:-3917371 Msa0712070:CDS
TCAGTAGCGGCAGCAGCTTC+AGG 0.330307 5_1:+3906053 None:intergenic
GAAGCATTGGCTTGATATAT+CGG 0.333120 5_1:+3908787 None:intergenic
GAGCCAACATATCTTTAAAA+AGG 0.334260 5_1:-3906085 Msa0712070:CDS
TGTCAAATCTCCCTTTGTTC+AGG 0.336864 5_1:-3916003 Msa0712070:intron
TGCTAAGTGCTTAGCTGCTC+TGG 0.349242 5_1:-3910381 Msa0712070:CDS
TCAACTGCTAATCTCTTTAC+AGG 0.364991 5_1:+3908457 None:intergenic
GAACCTTCTACTACTTCAAT+AGG 0.368958 5_1:+3916657 None:intergenic
AGATTCCAAAATTGGGTATA+CGG 0.370911 5_1:-3904991 Msa0712070:three_prime_UTR
AGTAAATATTGTTGAAAGAG+AGG 0.376476 5_1:-3915667 Msa0712070:CDS
AGGTGCAGCACTTAAGCTTC+TGG 0.376539 5_1:-3907211 Msa0712070:CDS
ACGGCGCCTCTGTGCTTGTT+GGG 0.379485 5_1:+3908857 None:intergenic
TTTATGCTTCAGATTCCTCT+TGG 0.379940 5_1:-3915867 Msa0712070:intron
AGCAGTCTGGATGAGTTTAT+AGG 0.385397 5_1:-3905086 Msa0712070:three_prime_UTR
GAAAACAAGTTTGTCTCAAC+AGG 0.387463 5_1:-3905501 Msa0712070:CDS
CCGCCTATTGAAGTAGTAGA+AGG 0.388769 5_1:-3916660 Msa0712070:CDS
AAAGAGAGGGAATCAGCTTT+AGG 0.389062 5_1:-3915653 Msa0712070:CDS
ATTGGAGGGATTGCTATATC+AGG 0.389470 5_1:-3916735 Msa0712070:CDS
CAGAGGCGCCGTGGGAAGGC+TGG 0.396114 5_1:-3908846 Msa0712070:CDS
TATCTCAAGGATGTTACTAT+TGG 0.405395 5_1:-3913943 Msa0712070:CDS
TCAGATTGAGCGCGAAGCTT+CGG 0.408481 5_1:+3917434 None:intergenic
AGCTTCGGAACGCTGCGTTT+TGG 0.410039 5_1:+3917449 None:intergenic
AGAAATAAGATTCCAAAATT+GGG 0.411100 5_1:-3904998 Msa0712070:three_prime_UTR
AGCAATCAGAAGGGGCCTGC+AGG 0.411285 5_1:+3915626 None:intergenic
TTATTATTTGCCAAATGCTT+CGG 0.411507 5_1:-3905357 Msa0712070:CDS
GCATCAAAGATAAATTCTTC+AGG 0.419594 5_1:+3908918 None:intergenic
GAAGGCGGTGGAGGCGGAGG+CGG 0.422731 5_1:+3909313 None:intergenic
TGTGAAGGCGGTGGAGGCGG+AGG 0.425194 5_1:+3909310 None:intergenic
TGGGCACGAGGGATCTGAAT+TGG 0.428468 5_1:+3916629 None:intergenic
ACCTACATCACAAGAATTGA+AGG 0.430273 5_1:-3906021 Msa0712070:intron
ACCAGTGACCTTACTCTTCT+GGG 0.432028 5_1:+3916610 None:intergenic
ATAGCAATCCCTCCAATCCT+AGG 0.437606 5_1:+3916741 None:intergenic
ACAACAGCATCCGAAGCATT+TGG 0.441288 5_1:+3905347 None:intergenic
AGGAACTGCTAAAACGATAA+TGG 0.441397 5_1:-3916706 Msa0712070:CDS
TGAAATTGCAAAGAGAGAAA+TGG 0.446876 5_1:+3917491 None:intergenic
TGAAAATGTCTAGGCTGTTA+GGG 0.448599 5_1:-3906174 Msa0712070:intron
GAAAGGCTTCCGTGTGGTGG+AGG 0.449203 5_1:-3906578 Msa0712070:CDS
TACTCCATAATAATGACAAA+AGG 0.449279 5_1:+3905056 None:intergenic
CAAAGAGGAAGAAGAAGAAG+AGG 0.450450 5_1:-3909251 Msa0712070:CDS
AGGAGTACCTTTGGAAGCAT+TGG 0.456193 5_1:+3908774 None:intergenic
GTCACAGAGGACAGACTCAT+TGG 0.461495 5_1:-3915843 Msa0712070:CDS
AAGTTATACAAGCAGGGATC+AGG 0.461637 5_1:-3907184 Msa0712070:intron
TGCTCTGGAGGGACGTGAAA+AGG 0.461890 5_1:-3910366 Msa0712070:CDS
CTCCTTAATGTATTGACTGA+AGG 0.462232 5_1:-3915690 Msa0712070:CDS
TTATGAAATGCAGATCATCT+TGG 0.465025 5_1:-3913974 Msa0712070:intron
GTGGAAGCATGGCATTGAAC+AGG 0.466542 5_1:-3907248 Msa0712070:CDS
GCTGGGAAGATATATAAATC+AGG 0.467269 5_1:-3905549 Msa0712070:CDS
GTTCAATGCCATGCTTCCAC+TGG 0.469040 5_1:+3907251 None:intergenic
GAATTTATCTTTGATGCTGA+AGG 0.474323 5_1:-3908912 Msa0712070:CDS
ATGCAAACAACATACGGAAT+GGG 0.475833 5_1:-3917581 Msa0712070:CDS
GTGAGGAGGGTTGAGCAGTC+TGG 0.478121 5_1:-3905099 Msa0712070:three_prime_UTR
GCAATCAGAAGGGGCCTGCA+GGG 0.479613 5_1:+3915627 None:intergenic
AGAATCATATTCCACGCGTT+GGG 0.480306 5_1:+3916049 None:intergenic
GCCATTGCAATCGATCTAGA+AGG 0.482231 5_1:+3906614 None:intergenic
ACCTTCAATTCTTGTGATGT+AGG 0.482578 5_1:+3906020 None:intergenic
GCAGAGAAAAGTGGCGATGT+TGG 0.482876 5_1:-3906140 Msa0712070:CDS
GGAGGGTCACCCCTTGCCCA+TGG 0.485712 5_1:-3906560 Msa0712070:CDS
TTGCCCTTCCAGCCTTCCCA+CGG 0.486145 5_1:+3908838 None:intergenic
AAGAGAAGAGAAGAGAAGAA+TGG 0.488612 5_1:-3917632 Msa0712070:five_prime_UTR
TCACGAACAGAACCCTCGTC+AGG 0.489907 5_1:+3915594 None:intergenic
CATGCAAACAACATACGGAA+TGG 0.490887 5_1:-3917582 Msa0712070:CDS
GCTACTGACCCTAGGATTGG+AGG 0.491446 5_1:-3916750 Msa0712070:CDS
TCAGCTTTAGGCACCCCTGC+AGG 0.492155 5_1:-3915641 Msa0712070:CDS
GGAGTTGAAGATTAGTGTGA+GGG 0.494526 5_1:+3917540 None:intergenic
AACAGGATGCAGAATGCAAA+AGG 0.496428 5_1:-3907231 Msa0712070:CDS
GATTATCAGTAACAATTGAC+CGG 0.499688 5_1:+3909356 None:intergenic
GCGCCGTGGGAAGGCTGGAA+GGG 0.499835 5_1:-3908841 Msa0712070:CDS
GGCTTTACGAGGTGGTGTCC+AGG 0.504444 5_1:-3913890 Msa0712070:intron
CAGAATCATATTCCACGCGT+TGG 0.505702 5_1:+3916048 None:intergenic
GGCGCCGTGGGAAGGCTGGA+AGG 0.507433 5_1:-3908842 Msa0712070:CDS
ATGAAATTCTTGAGGTGGCT+GGG 0.509186 5_1:-3905566 Msa0712070:CDS
TGAGCTTCAGCAAGTAGGCC+TGG 0.509356 5_1:+3915771 None:intergenic
CTGAATAGTACCTGAACAAA+GGG 0.509664 5_1:+3915993 None:intergenic
TCTCCTCCTCCTCAGAAGTA+AGG 0.510330 5_1:+3917396 None:intergenic
GTAAATATTGTTGAAAGAGA+GGG 0.512847 5_1:-3915666 Msa0712070:CDS
CAAAGAACAATTAAAATACC+TGG 0.514578 5_1:-3913920 Msa0712070:CDS
TACTTGGGGCTACTGACCCT+AGG 0.515179 5_1:-3916758 Msa0712070:CDS
AATGTCTAGGCTGTTAGGGT+TGG 0.518126 5_1:-3906170 Msa0712070:intron
AGAGGAAGAAGAAGAAGAGG+AGG 0.518585 5_1:-3909248 Msa0712070:intron
TGGCAGAAAGTTATACAAGC+AGG 0.519429 5_1:-3907191 Msa0712070:CDS
ATAAGGTGCAGCAGCTCTAA+GGG 0.521352 5_1:+3908429 None:intergenic
CGAGGGATCTGAATTGGCTA+TGG 0.524852 5_1:+3916635 None:intergenic
CTCGTAAAGCCTCAAGAACC+AGG 0.525256 5_1:+3913902 None:intergenic
ATTATTGTAGGTGATATTTG+TGG 0.528658 5_1:-3907280 Msa0712070:intron
AACAAGCACAGAGGCGCCGT+GGG 0.528819 5_1:-3908854 Msa0712070:CDS
AGCACAGAGGCGCCGTGGGA+AGG 0.530519 5_1:-3908850 Msa0712070:CDS
GATGAAATTCTTGAGGTGGC+TGG 0.531208 5_1:-3905567 Msa0712070:CDS
TTCGGATGCTGTTGTCTCGA+TGG 0.532713 5_1:-3905339 Msa0712070:CDS
ATTAAAATACCTGGTTCTTG+AGG 0.532815 5_1:-3913911 Msa0712070:CDS
GGATGGGAAGGTGTCAAGCT+TGG 0.534423 5_1:+3905261 None:intergenic
CTTGAAAGGCTTCCGTGTGG+TGG 0.535913 5_1:-3906581 Msa0712070:CDS
CACCTTATCAAAAGTTGCGA+AGG 0.536565 5_1:-3908414 Msa0712070:CDS
CTTCAGCAAGTAGGCCTGGT+TGG 0.538289 5_1:+3915775 None:intergenic
CGTGGTAAGACCATGGGCAA+GGG 0.542333 5_1:+3906550 None:intergenic
AATGAAGGATGAAATTCTTG+AGG 0.542686 5_1:-3905574 Msa0712070:intron
GAAAACCGTGTTGCAGCTGT+TGG 0.544146 5_1:-3914958 Msa0712070:CDS
ACAGAATGAAGAAGACAAAG+AGG 0.546778 5_1:-3909266 Msa0712070:CDS
CATTGGATCAGTTGATGTTG+AGG 0.551202 5_1:-3915826 Msa0712070:CDS
AGTATTTAAAATGGTTGATG+AGG 0.551410 5_1:-3914902 Msa0712070:CDS
AATTTATCTTTGATGCTGAA+GGG 0.551889 5_1:-3908911 Msa0712070:CDS
ATTGCACAACTATAAATGAC+TGG 0.556252 5_1:-3905211 Msa0712070:three_prime_UTR
GGATGACAAGGATGAAGAGA+AGG 0.558689 5_1:-3908961 Msa0712070:CDS
ACCTTACTCTTCTGGGCACG+AGG 0.558993 5_1:+3916617 None:intergenic
AAAGGCTTCCGTGTGGTGGA+GGG 0.562835 5_1:-3906577 Msa0712070:CDS
GGGGCTACTGACCCTAGGAT+TGG 0.568553 5_1:-3916753 Msa0712070:CDS
ATTTATCTTTGATGCTGAAG+GGG 0.570562 5_1:-3908910 Msa0712070:CDS
GGTTATAGGTAGCAATCAGA+AGG 0.570961 5_1:+3915616 None:intergenic
TAAGTGCTTAGCTGCTCTGG+AGG 0.572301 5_1:-3910378 Msa0712070:CDS
GTTCTTGAGGCTTTACGAGG+TGG 0.573276 5_1:-3913898 Msa0712070:CDS
CTGTTGTCTCGATGGCAACA+AGG 0.573710 5_1:-3905331 Msa0712070:CDS
ATTGGGTATACGGACTAAAG+AGG 0.574638 5_1:-3904981 None:intergenic
CCGTGGTAAGACCATGGGCA+AGG 0.574710 5_1:+3906549 None:intergenic
CAATCAGAAGGGGCCTGCAG+GGG 0.574993 5_1:+3915628 None:intergenic
CACAACTATAAATGACTGGT+GGG 0.575873 5_1:-3905207 Msa0712070:three_prime_UTR
TTCTTGTGATGTAGGTTTAG+GGG 0.576948 5_1:+3906028 None:intergenic
CTGGTTCTTGAGGCTTTACG+AGG 0.578391 5_1:-3913901 Msa0712070:CDS
TGGCTAGGAAACGTCTTGAA+AGG 0.581024 5_1:-3906595 Msa0712070:CDS
CAACAAGCACAGAGGCGCCG+TGG 0.582485 5_1:-3908855 Msa0712070:CDS
TGGAGTTGAAGATTAGTGTG+AGG 0.583015 5_1:+3917539 None:intergenic
GGTCCTTACTTCTGAGGAGG+AGG 0.585577 5_1:-3917399 Msa0712070:CDS
GTTGAGGAGTCTGTGAAGAC+TGG 0.586435 5_1:-3915810 Msa0712070:CDS
GGCACGACTGTTTACCAACC+AGG 0.589699 5_1:-3915789 Msa0712070:CDS
GGATTAAATGCAGAGAAAAG+TGG 0.591384 5_1:-3906149 Msa0712070:CDS
CTACTGACCCTAGGATTGGA+GGG 0.596769 5_1:-3916749 Msa0712070:CDS
ATCGCATTGCAATTAACTTG+AGG 0.596901 5_1:-3915560 Msa0712070:intron
TCTTTCTGAACAGGATGACA+AGG 0.597752 5_1:-3908973 Msa0712070:intron
CTGTCCTCTGTGACTCCAAG+AGG 0.597863 5_1:+3915852 None:intergenic
ATTATCAGTAACAATTGACC+GGG 0.598200 5_1:+3909357 None:intergenic
GCACAACTATAAATGACTGG+TGG 0.598995 5_1:-3905208 Msa0712070:three_prime_UTR
TCTGAATAGTACCTGAACAA+AGG 0.600732 5_1:+3915992 None:intergenic
GGCAGAAAGTTATACAAGCA+GGG 0.600782 5_1:-3907190 Msa0712070:CDS
CTAGATCGATTGCAATGGCT+AGG 0.601938 5_1:-3906610 Msa0712070:CDS
GAGATTGCTAGAGTTGCTCA+AGG 0.602162 5_1:-3905468 Msa0712070:intron
TGCATACCGTGGTAAGACCA+TGG 0.605407 5_1:+3906543 None:intergenic
CGCGTGGAATATGATTCTGA+TGG 0.606136 5_1:-3916044 Msa0712070:CDS
TAGAATTGGTCATTCTCCCC+CGG 0.606496 5_1:-3909375 Msa0712070:CDS
ATATTTGTGGTTGATGCCAG+TGG 0.606523 5_1:-3907267 Msa0712070:CDS
TTTATCTTTGATGCTGAAGG+GGG 0.606605 5_1:-3908909 Msa0712070:CDS
CTCTATGAGCTTCAGCAAGT+AGG 0.607534 5_1:+3915766 None:intergenic
GTATCAATAATTCCTTTCCG+TGG 0.607702 5_1:-3906662 Msa0712070:CDS
CTACTTGCTGAAGCTCATAG+AGG 0.607951 5_1:-3915765 Msa0712070:CDS
GAACTTCAGCTGAATCTCCA+CGG 0.608553 5_1:+3906645 None:intergenic
AGATGATCTTGCCCAACGCG+TGG 0.610183 5_1:-3916060 Msa0712070:CDS
ATGATTGTTGCAATCACTGA+TGG 0.614936 5_1:-3906110 Msa0712070:CDS
TGCTGCGGTCCTTACTTCTG+AGG 0.618181 5_1:-3917405 Msa0712070:CDS
TGCGGTCCTTACTTCTGAGG+AGG 0.618491 5_1:-3917402 Msa0712070:CDS
ACCTTATCAAAAGTTGCGAA+GGG 0.620961 5_1:-3908413 Msa0712070:CDS
TGGCCAATAACAGCAGCAAG+AGG 0.621831 5_1:+3917335 None:intergenic
TATCAAGCCAATGCTTCCAA+AGG 0.621959 5_1:-3908781 Msa0712070:intron
TCAGCTGAATCTCCACGGAA+AGG 0.621995 5_1:+3906650 None:intergenic
GCATACCGTGGTAAGACCAT+GGG 0.622210 5_1:+3906544 None:intergenic
AAGTGCTTAGCTGCTCTGGA+GGG 0.622335 5_1:-3910377 Msa0712070:CDS
GAGTTGAAGATTAGTGTGAG+GGG 0.625085 5_1:+3917541 None:intergenic
GGTTGATGCCAGTGGAAGCA+TGG 0.625498 5_1:-3907259 Msa0712070:CDS
GTTATAGGTAGCAATCAGAA+GGG 0.625655 5_1:+3915617 None:intergenic
TAGCAATCCCTCCAATCCTA+GGG 0.627946 5_1:+3916742 None:intergenic
TGTTGTCTCGATGGCAACAA+GGG 0.629826 5_1:-3905330 Msa0712070:CDS
GTGGTAAGACCATGGGCAAG+GGG 0.630171 5_1:+3906551 None:intergenic
CACGAACAGAACCCTCGTCA+GGG 0.631145 5_1:+3915595 None:intergenic
TCAATCTGAAAATGGTGCTG+CGG 0.632894 5_1:-3917420 Msa0712070:CDS
ACCTTCTAGATCGATTGCAA+TGG 0.641122 5_1:-3906615 Msa0712070:CDS
GGCCAATAACAGCAGCAAGA+GGG 0.644982 5_1:+3917336 None:intergenic
CTTGGCTAGAGAGTATCTCA+AGG 0.645683 5_1:-3913956 Msa0712070:CDS
AGGGGTGACCCTCCACCACA+CGG 0.649940 5_1:+3906569 None:intergenic
TACAGACAATGCAAAGACAC+AGG 0.654379 5_1:-3914878 Msa0712070:intron
CAATTCCAACAGCTGCAACA+CGG 0.658426 5_1:+3914953 None:intergenic
AGGTTTAGGGGCATCAGTAG+CGG 0.659828 5_1:+3906040 None:intergenic
TGCTACCTATAACCCTGACG+AGG 0.663872 5_1:-3915607 Msa0712070:CDS
GAAGGATGAAATTCTTGAGG+TGG 0.669416 5_1:-3905571 Msa0712070:intron
CCTTACTCTTCTGGGCACGA+GGG 0.673244 5_1:+3916618 None:intergenic
TGTCTCAACAGGTTTCGCGA+AGG 0.673285 5_1:-3905490 Msa0712070:CDS
GAGGGATTGCTATATCAGGA+AGG 0.673630 5_1:-3916731 Msa0712070:CDS
CCTTGCCCATGGTCTTACCA+CGG 0.679671 5_1:-3906549 Msa0712070:intron
ATTGCAATCGATCTAGAAGG+TGG 0.681426 5_1:+3906617 None:intergenic
CCTTCTACTACTTCAATAGG+CGG 0.685944 5_1:+3916660 None:intergenic
ATTGCTATATCAGGAAGGCG+AGG 0.686132 5_1:-3916726 Msa0712070:CDS
TTATAGGTAGCAATCAGAAG+GGG 0.696472 5_1:+3915618 None:intergenic
TCTTTGCCCAACAAGCACAG+AGG 0.710858 5_1:-3908863 Msa0712070:CDS
GCTAAAACGATAATGGCACG+TGG 0.711240 5_1:-3916699 Msa0712070:CDS
GCTACCTATAACCCTGACGA+GGG 0.713287 5_1:-3915606 Msa0712070:CDS
TTATCAGTAACAATTGACCG+GGG 0.718464 5_1:+3909358 None:intergenic
ACAGAATTTCAGGATAACTG+TGG 0.720569 5_1:-3914928 Msa0712070:CDS
CGTCTTGAAAGGCTTCCGTG+TGG 0.726411 5_1:-3906584 Msa0712070:CDS
GGGACGTGAAAAGGTTTACG+CGG 0.726630 5_1:-3910357 Msa0712070:CDS
GATTCCTCTTGGAGTCACAG+AGG 0.727534 5_1:-3915856 Msa0712070:CDS
TATCAGTAACAATTGACCGG+GGG 0.732295 5_1:+3909359 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTATTATTA+GGG + chr5_1:3914860-3914879 None:intergenic 0.0%
!! TTATTATTATTATTATTATT+AGG + chr5_1:3914861-3914880 None:intergenic 0.0%
!! TTTCTCAATAAAAAAAAAAA+AGG + chr5_1:3906034-3906053 None:intergenic 10.0%
!! ACTCTTTAAATAATAATTAA+TGG + chr5_1:3910067-3910086 None:intergenic 10.0%
!! TTAGAAATAAATAAAAATTG+AGG - chr5_1:3910327-3910346 Msa0712070:intron 10.0%
!! TAGAAATAAATAAAAATTGA+GGG - chr5_1:3910328-3910347 Msa0712070:intron 10.0%
!!! CACATATTTTAATTTTATTT+TGG + chr5_1:3910747-3910766 None:intergenic 10.0%
!!! AATTTATATTTTAAATGTGT+GGG + chr5_1:3912454-3912473 None:intergenic 10.0%
!!! AAATTTATATTTTAAATGTG+TGG + chr5_1:3912455-3912474 None:intergenic 10.0%
!!! TAAATATAATTTTATTTCCT+CGG - chr5_1:3912666-3912685 Msa0712070:intron 10.0%
!! TATTTAACCTTAAAATAATT+GGG + chr5_1:3914679-3914698 None:intergenic 10.0%
!! ATATTTAACCTTAAAATAAT+TGG + chr5_1:3914678-3914697 None:intergenic 10.0%
!! ATATTTAACCTTAAAATAAT+TGG - chr5_1:3914678-3914697 Msa0712070:intron 10.0%
!! TATTTAACCTTAAAATAATT+GGG - chr5_1:3914679-3914698 Msa0712070:intron 10.0%
!! ATATTATAAAGAAGAATTAA+AGG + chr5_1:3914945-3914964 None:intergenic 10.0%
!!! TTTAATTTTCTAAACTTTTA+AGG - chr5_1:3914988-3915007 Msa0712070:intron 10.0%
!!! TTTGTTTCTTTATAATTTAA+CGG - chr5_1:3915475-3915494 Msa0712070:intron 10.0%
!! TATTAATATAATTACTATTC+TGG - chr5_1:3915920-3915939 Msa0712070:intron 10.0%
!! TCATTAAAAATATTAAAAAC+AGG + chr5_1:3916194-3916213 None:intergenic 10.0%
!! TAACATTATGTAAAAAAATT+GGG + chr5_1:3917376-3917395 None:intergenic 10.0%
!! ATAACATTATGTAAAAAAAT+TGG + chr5_1:3917377-3917396 None:intergenic 10.0%
!! AAAAAAAATCTGATTAATTA+CGG + chr5_1:3917449-3917468 None:intergenic 10.0%
!! AAAATAACTTTACAAGTTTA+AGG - chr5_1:3906088-3906107 Msa0712070:CDS 15.0%
!! TTAAAGGTAAAAATAAGAAA+GGG + chr5_1:3906482-3906501 None:intergenic 15.0%
!! AAATTAAGAGTAATATTTGT+AGG - chr5_1:3906525-3906544 Msa0712070:intron 15.0%
!! TAAATGCTAAAAGTAAAAAT+TGG + chr5_1:3907432-3907451 None:intergenic 15.0%
!!! ATTAGTTTATAAAACTATGA+TGG + chr5_1:3907505-3907524 None:intergenic 15.0%
!!! TTTTATTTATTACGTTCATA+GGG + chr5_1:3908233-3908252 None:intergenic 15.0%
!!! ATTTTATTTATTACGTTCAT+AGG + chr5_1:3908234-3908253 None:intergenic 15.0%
!!! TACATAATTTTATCCAAATT+GGG - chr5_1:3908368-3908387 Msa0712070:intron 15.0%
!!! ATATCATTTTATTTTTTCCA+AGG + chr5_1:3909863-3909882 None:intergenic 15.0%
!! ATGATATTGAAAATTGAAAT+TGG - chr5_1:3909876-3909895 Msa0712070:intron 15.0%
!! AGTGCATATTTAATTATTAA+GGG + chr5_1:3910167-3910186 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG + chr5_1:3910168-3910187 None:intergenic 15.0%
!!! TAATATATTTTGAATAAGAG+GGG + chr5_1:3910452-3910471 None:intergenic 15.0%
!!! CTAATATATTTTGAATAAGA+GGG + chr5_1:3910453-3910472 None:intergenic 15.0%
!!! TCTAATATATTTTGAATAAG+AGG + chr5_1:3910454-3910473 None:intergenic 15.0%
!!! TTGTTTCATATTTTATAACA+GGG + chr5_1:3910723-3910742 None:intergenic 15.0%
!! TAGTCCATATTTAATTATTA+AGG - chr5_1:3910967-3910986 Msa0712070:intron 15.0%
!! AGTCCATATTTAATTATTAA+GGG - chr5_1:3910968-3910987 Msa0712070:intron 15.0%
!!! AGTATAAATTTTACTTTTCA+AGG - chr5_1:3911028-3911047 Msa0712070:intron 15.0%
!!! GTATAAATTTTACTTTTCAA+GGG - chr5_1:3911029-3911048 Msa0712070:intron 15.0%
!! TTTCAAGAATTGTAATAAAT+AGG + chr5_1:3911705-3911724 None:intergenic 15.0%
!! GTATAATTTAAAAATTGACT+TGG - chr5_1:3912018-3912037 Msa0712070:intron 15.0%
!!! AAATCAAATTATGAATCTTT+TGG + chr5_1:3912602-3912621 None:intergenic 15.0%
!! CATTATAATATAGACAATTA+AGG + chr5_1:3912837-3912856 None:intergenic 15.0%
!!! TATTCTTTGACTTAATTTAA+AGG - chr5_1:3912873-3912892 Msa0712070:intron 15.0%
!! AAACGTTAAATAAAAATTTG+AGG - chr5_1:3913408-3913427 Msa0712070:intron 15.0%
!! TTGAAATGAATGTTTATATA+CGG - chr5_1:3913514-3913533 Msa0712070:intron 15.0%
!! ATATACAAATTATATAGGTA+CGG + chr5_1:3913618-3913637 None:intergenic 15.0%
!! AGAGAATATACAAATTATAT+AGG + chr5_1:3913623-3913642 None:intergenic 15.0%
!!! AAAAAATGTTATATTTTCAG+AGG - chr5_1:3913796-3913815 Msa0712070:intron 15.0%
!!! ATAATTTTTTCTTTGAAGTT+TGG - chr5_1:3913934-3913953 Msa0712070:CDS 15.0%
!! AAAACATTTAATGAAATGTA+GGG + chr5_1:3914787-3914806 None:intergenic 15.0%
!! AAAAACATTTAATGAAATGT+AGG + chr5_1:3914786-3914805 None:intergenic 15.0%
!!! TTTAAGGTTAAATATGTTTT+TGG - chr5_1:3914538-3914557 Msa0712070:intron 15.0%
!! TTAAAATCCCTAAAATAATA+AGG + chr5_1:3914596-3914615 None:intergenic 15.0%
!! AAAACATTTATTGAAATGTA+AGG - chr5_1:3914615-3914634 Msa0712070:intron 15.0%
!! AAAAACATTTAATGAAATGT+AGG - chr5_1:3914786-3914805 Msa0712070:intron 15.0%
!! AAAACATTTAATGAAATGTA+GGG - chr5_1:3914787-3914806 Msa0712070:intron 15.0%
!!! TTATATAGAATTATTTTCCT+TGG - chr5_1:3914916-3914935 Msa0712070:CDS 15.0%
!! GCTTATTCAAAAAAAAATTA+AGG + chr5_1:3916909-3916928 None:intergenic 15.0%
!! ACATTGACATTATAATATCA+TGG - chr5_1:3906171-3906190 Msa0712070:intron 20.0%
!! CATTGACATTATAATATCAT+GGG - chr5_1:3906172-3906191 Msa0712070:intron 20.0%
!! AAATCAATTCATTAATTCTC+CGG + chr5_1:3906400-3906419 None:intergenic 20.0%
!! TAAAGGTAAAAATAAGAAAG+GGG + chr5_1:3906481-3906500 None:intergenic 20.0%
!! CTTAAAGGTAAAAATAAGAA+AGG + chr5_1:3906483-3906502 None:intergenic 20.0%
!!! TGTTGATGAAATTAATCTTT+TGG - chr5_1:3906880-3906899 Msa0712070:intron 20.0%
!!! TACTTTTAGCATTTACAATT+TGG - chr5_1:3907437-3907456 Msa0712070:intron 20.0%
!! ACTAATAAAAAATGATTGAG+TGG - chr5_1:3907519-3907538 Msa0712070:intron 20.0%
!! CATCTAATTAACTAAGTATT+AGG + chr5_1:3907560-3907579 None:intergenic 20.0%
!! ATAATTAGAAATAAGAGAGA+TGG + chr5_1:3907599-3907618 None:intergenic 20.0%
!!! CTACATAATTTTATCCAAAT+TGG - chr5_1:3908367-3908386 Msa0712070:intron 20.0%
!!! TCCTTTTGTCTATTTTATTT+TGG - chr5_1:3908514-3908533 Msa0712070:intron 20.0%
!! ACCAAAATAAAATAGACAAA+AGG + chr5_1:3908518-3908537 None:intergenic 20.0%
!!! TAGTTTTAAAGGAAATATTC+TGG - chr5_1:3909195-3909214 Msa0712070:intron 20.0%
!! GTTAGATTAAAAAGAATCAA+GGG + chr5_1:3909451-3909470 None:intergenic 20.0%
!! AAAAAATTGAGAATGTGTTT+AGG + chr5_1:3909529-3909548 None:intergenic 20.0%
!!! ATTTGATTTCAAATCATAGA+TGG + chr5_1:3909604-3909623 None:intergenic 20.0%
!! AAAAAATGAATTGATATCGT+TGG - chr5_1:3909774-3909793 Msa0712070:intron 20.0%
!!! ATATTGAAAATCAAAAGCAT+TGG - chr5_1:3909900-3909919 Msa0712070:intron 20.0%
!! ATTAGAAAAACAATACCATA+GGG - chr5_1:3910020-3910039 Msa0712070:intron 20.0%
!! TTAATTACTAATAATCCCTA+TGG + chr5_1:3910038-3910057 None:intergenic 20.0%
!! TATTTAATTATTAAGGGAGA+GGG + chr5_1:3910161-3910180 None:intergenic 20.0%
!! ATATTTAATTATTAAGGGAG+AGG + chr5_1:3910973-3910992 None:intergenic 20.0%
!!! TGTATATTTTCACATAAGAA+GGG + chr5_1:3910422-3910441 None:intergenic 20.0%
!!! GTAATTCAAACTTCTTTTAA+GGG + chr5_1:3910494-3910513 None:intergenic 20.0%
!!! TGTAATTCAAACTTCTTTTA+AGG + chr5_1:3910495-3910514 None:intergenic 20.0%
!! AAAAAAAAAAATAGCATTGC+AGG - chr5_1:3910617-3910636 Msa0712070:intron 20.0%
!!! GTTGTTTCATATTTTATAAC+AGG + chr5_1:3910724-3910743 None:intergenic 20.0%
!! CATATTTAATTATTAAGGGA+GGG - chr5_1:3910972-3910991 Msa0712070:intron 20.0%
!! ATATTTAATTATTAAGGGAG+GGG - chr5_1:3910973-3910992 Msa0712070:intron 20.0%
!!! ACTCTAAATTTTAACATAAG+AGG - chr5_1:3911130-3911149 Msa0712070:intron 20.0%
!!! CTCTAAATTTTAACATAAGA+GGG - chr5_1:3911131-3911150 Msa0712070:intron 20.0%
!!! TCTAAATTTTAACATAAGAG+GGG - chr5_1:3911132-3911151 Msa0712070:intron 20.0%
!!! TCAAATATGTTTTGAATAAG+AGG - chr5_1:3911203-3911222 Msa0712070:intron 20.0%
!!! CAAATATGTTTTGAATAAGA+GGG - chr5_1:3911204-3911223 Msa0712070:intron 20.0%
!!! AAATATGTTTTGAATAAGAG+GGG - chr5_1:3911205-3911224 Msa0712070:intron 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - chr5_1:3911233-3911252 Msa0712070:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr5_1:3911234-3911253 Msa0712070:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr5_1:3911235-3911254 Msa0712070:intron 20.0%
!! TGTAATTTACTCTAAATGAA+GGG - chr5_1:3911296-3911315 Msa0712070:intron 20.0%
!! TTTATGGAATAAAAAAGACA+TGG + chr5_1:3911510-3911529 None:intergenic 20.0%
!!! GTCTTTTTTATTCCATAAAA+AGG - chr5_1:3911511-3911530 Msa0712070:intron 20.0%
!! TATCTCTATTCAAATAAAGT+AGG - chr5_1:3911544-3911563 Msa0712070:intron 20.0%
!! GCGTAATTAATAAATATCAT+AGG + chr5_1:3911846-3911865 None:intergenic 20.0%
!!! GATGAATTTTTTCTGTTAAA+TGG + chr5_1:3912115-3912134 None:intergenic 20.0%
!! TAAATTTCAAAGAAAGCTTA+CGG + chr5_1:3912297-3912316 None:intergenic 20.0%
!!! TTTCTTTGAAATTTAAATGC+TGG - chr5_1:3912302-3912321 Msa0712070:intron 20.0%
!! AAACATTCATTTCAAAAGAT+AGG + chr5_1:3913509-3913528 None:intergenic 20.0%
!! AAACATCAAATATATTTAGC+TGG - chr5_1:3913901-3913920 Msa0712070:CDS 20.0%
!! TCAAAGATAATTACTTAACA+GGG + chr5_1:3914054-3914073 None:intergenic 20.0%
!! ATCAAAGATAATTACTTAAC+AGG + chr5_1:3914055-3914074 None:intergenic 20.0%
!!! TTTCAACAAATACTTTTCTA+CGG + chr5_1:3914242-3914261 None:intergenic 20.0%
!!! AGAATAGTCCTTATTATTTT+AGG - chr5_1:3914585-3914604 Msa0712070:intron 20.0%
!!! GAATAGTCCTTATTATTTTA+GGG - chr5_1:3914586-3914605 Msa0712070:intron 20.0%
!! AAAATAACCTGAATTATTGT+AGG - chr5_1:3915321-3915340 Msa0712070:intron 20.0%
!!! AATTTTTCATCATTCAGATA+CGG - chr5_1:3915597-3915616 Msa0712070:CDS 20.0%
!!! AATTACTATTCTGGTTAAAT+AGG - chr5_1:3915929-3915948 Msa0712070:intron 20.0%
!! AAGAAATGTTAAAATCAGTT+TGG - chr5_1:3916348-3916367 Msa0712070:intron 20.0%
!!! TTATTTTTCTGAAAATGTCT+AGG - chr5_1:3916430-3916449 Msa0712070:intron 20.0%
!!! GGTTTATATTTTCGTTTATT+TGG + chr5_1:3916684-3916703 None:intergenic 20.0%
!! ATACATGAAATGAAAGTTAT+AGG + chr5_1:3916705-3916724 None:intergenic 20.0%
!! TATAACTTTCATTTCATGTA+TGG - chr5_1:3916704-3916723 Msa0712070:CDS 20.0%
!! TGTCTTGAATTCAATATAAA+TGG + chr5_1:3916754-3916773 None:intergenic 20.0%
!! TTATGTAAAAAAATTGGGAT+GGG + chr5_1:3917371-3917390 None:intergenic 20.0%
!! ATTATGTAAAAAAATTGGGA+TGG + chr5_1:3917372-3917391 None:intergenic 20.0%
!!! ATATATTTTTCTAACTTGTG+AGG - chr5_1:3917497-3917516 Msa0712070:CDS 20.0%
!! TAGAAATAAGATTCCAAAAT+TGG - chr5_1:3917614-3917633 Msa0712070:five_prime_UTR 20.0%
!! AGAAATAAGATTCCAAAATT+GGG - chr5_1:3917615-3917634 Msa0712070:five_prime_UTR 20.0%
! TAAGAAAAGGAAGAATTACT+TGG + chr5_1:3905301-3905320 None:intergenic 25.0%
! AAATGTTGAAAGCTAAGAAA+AGG + chr5_1:3905314-3905333 None:intergenic 25.0%
! ACTCATTATTCATTCTTAGA+AGG - chr5_1:3905366-3905385 Msa0712070:CDS 25.0%
! AGAAAATGACAGTTACTAAA+TGG - chr5_1:3905464-3905483 Msa0712070:intron 25.0%
! GAAAATGACAGTTACTAAAT+GGG - chr5_1:3905465-3905484 Msa0712070:intron 25.0%
!! ATTAAAACTGCTCTTTTACT+TGG - chr5_1:3905839-3905858 Msa0712070:intron 25.0%
!! TTAAAACTGCTCTTTTACTT+GGG - chr5_1:3905840-3905859 Msa0712070:intron 25.0%
! ATAACTTTACAAGTTTAAGG+TGG - chr5_1:3906091-3906110 Msa0712070:CDS 25.0%
!!! CTTTTGAAACAATGACTTAA+AGG + chr5_1:3906498-3906517 None:intergenic 25.0%
! TTAAGAGTAATATTTGTAGG+TGG - chr5_1:3906528-3906547 Msa0712070:intron 25.0%
! TAAGAGTAATATTTGTAGGT+GGG - chr5_1:3906529-3906548 Msa0712070:intron 25.0%
!! TGAAATTAATCTTTTGGATG+AGG - chr5_1:3906886-3906905 Msa0712070:intron 25.0%
!! GAAATTAATCTTTTGGATGA+GGG - chr5_1:3906887-3906906 Msa0712070:intron 25.0%
! AGTAAATATTGTTGAAAGAG+AGG - chr5_1:3906946-3906965 Msa0712070:intron 25.0%
! GTAAATATTGTTGAAAGAGA+GGG - chr5_1:3906947-3906966 Msa0712070:intron 25.0%
! AAAATTATGAAGAATCCTGA+AGG + chr5_1:3907104-3907123 None:intergenic 25.0%
!!! GGCTTAAAAAGTTTTTCAAT+TGG + chr5_1:3907484-3907503 None:intergenic 25.0%
! ATTAACTAAGTATTAGGTCA+GGG + chr5_1:3907554-3907573 None:intergenic 25.0%
! AATTAACTAAGTATTAGGTC+AGG + chr5_1:3907555-3907574 None:intergenic 25.0%
!! AGTATTTAAAATGGTTGATG+AGG - chr5_1:3907711-3907730 Msa0712070:intron 25.0%
! AACAATGTATAGATAGTAAG+AGG + chr5_1:3908009-3908028 None:intergenic 25.0%
! AATTTCTATTGTGAAAACCA+GGG + chr5_1:3908106-3908125 None:intergenic 25.0%
! TAATTTCTATTGTGAAAACC+AGG + chr5_1:3908107-3908126 None:intergenic 25.0%
! TAAATGACAGTTAAGATAGA+TGG - chr5_1:3908337-3908356 Msa0712070:intron 25.0%
! AAATTAGTAATTTCGTGGTA+AGG + chr5_1:3908456-3908475 None:intergenic 25.0%
! TGGTAAAATTAGTAATTTCG+TGG + chr5_1:3908461-3908480 None:intergenic 25.0%
!!! CAGCTTTTATTTCACAATAT+AGG - chr5_1:3908573-3908592 Msa0712070:intron 25.0%
! CAAAGAACAATTAAAATACC+TGG - chr5_1:3908693-3908712 Msa0712070:intron 25.0%
!!! ATCCATTGATTGTGAATTTT+TGG - chr5_1:3908818-3908837 Msa0712070:CDS 25.0%
!!! AAATCTCTTTTTGTTTGAGA+GGG - chr5_1:3908931-3908950 Msa0712070:CDS 25.0%
! ATTCGTAATCTAATAGTTAG+AGG + chr5_1:3909010-3909029 None:intergenic 25.0%
! TATAGAATGATCAGTTATTG+AGG + chr5_1:3909077-3909096 None:intergenic 25.0%
! TTAAAACTATAGCCTTTCTT+TGG + chr5_1:3909184-3909203 None:intergenic 25.0%
!!! AAGAAAGGCTATAGTTTTAA+AGG - chr5_1:3909184-3909203 Msa0712070:intron 25.0%
! CGTTAGATTAAAAAGAATCA+AGG + chr5_1:3909452-3909471 None:intergenic 25.0%
!! GATATCACTTCATTCTTTTT+AGG + chr5_1:3909841-3909860 None:intergenic 25.0%
! GATTAGAAAAACAATACCAT+AGG - chr5_1:3910019-3910038 Msa0712070:intron 25.0%
!! TGTAATTCAAGTTTCTCTTA+GGG + chr5_1:3910106-3910125 None:intergenic 25.0%
! TTCGAAAAAAATAGTATTGC+GGG + chr5_1:3910274-3910293 None:intergenic 25.0%
! CTTCGAAAAAAATAGTATTG+CGG + chr5_1:3910275-3910294 None:intergenic 25.0%
!! GTGTATATTTTCACATAAGA+AGG + chr5_1:3910423-3910442 None:intergenic 25.0%
! TTACTAAAGTCGATTAAGTA+TGG - chr5_1:3910772-3910791 Msa0712070:intron 25.0%
! CCTCCCTTAATAATTAAATA+TGG + chr5_1:3910974-3910993 None:intergenic 25.0%
! CCATATTTAATTATTAAGGG+AGG - chr5_1:3910971-3910990 Msa0712070:intron 25.0%
! TATTTAATTATTAAGGGAGG+GGG - chr5_1:3910974-3910993 Msa0712070:intron 25.0%
! TGTTTATTCAAGCATCTTAT+AGG - chr5_1:3910998-3911017 Msa0712070:intron 25.0%
! GTTTATTCAAGCATCTTATA+GGG - chr5_1:3910999-3911018 Msa0712070:intron 25.0%
! TTTATTCAAGCATCTTATAG+GGG - chr5_1:3911000-3911019 Msa0712070:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG - chr5_1:3911032-3911051 Msa0712070:intron 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG - chr5_1:3911033-3911052 Msa0712070:intron 25.0%
!!! AGTGTATATTTTAACACAAG+AGG - chr5_1:3911057-3911076 Msa0712070:intron 25.0%
!!! GTGTATATTTTAACACAAGA+GGG - chr5_1:3911058-3911077 Msa0712070:intron 25.0%
!!! TGTATATTTTAACACAAGAG+GGG - chr5_1:3911059-3911078 Msa0712070:intron 25.0%
! TGAAATTCAAGTATCTTTGA+GGG - chr5_1:3911089-3911108 Msa0712070:intron 25.0%
! TGTAATTCAAGCATATTTGA+GGG - chr5_1:3911265-3911284 Msa0712070:intron 25.0%
! GTGTAATTTACTCTAAATGA+AGG - chr5_1:3911295-3911314 Msa0712070:intron 25.0%
!! TAAGTTTGTAGACTTACTTT+TGG - chr5_1:3911332-3911351 Msa0712070:intron 25.0%
!! TAATACTGATTACTTTACTG+AGG - chr5_1:3911474-3911493 Msa0712070:intron 25.0%
! CTATTCAAATAAAGTAGGAT+AGG - chr5_1:3911549-3911568 Msa0712070:intron 25.0%
! TGATATTTATTAATTACGCG+TGG - chr5_1:3911847-3911866 Msa0712070:intron 25.0%
!!! TAGAGATGATAATTTTAGAG+TGG + chr5_1:3912784-3912803 None:intergenic 25.0%
! TCTCTACAAATCACATTAAT+TGG - chr5_1:3912798-3912817 Msa0712070:intron 25.0%
! AGTATAATCAAACTTGATCT+CGG - chr5_1:3913036-3913055 Msa0712070:intron 25.0%
! CGAGCATAAATACATATAAA+GGG + chr5_1:3913067-3913086 None:intergenic 25.0%
! TCGAGCATAAATACATATAA+AGG + chr5_1:3913068-3913087 None:intergenic 25.0%
!! TGTCGTATATTTTGTAATTC+AGG - chr5_1:3913215-3913234 Msa0712070:intron 25.0%
!! TTTTGTAATTCAGGTAGAAT+TGG - chr5_1:3913224-3913243 Msa0712070:intron 25.0%
! CATGTTACTGAAAAATGAAT+AGG - chr5_1:3913551-3913570 Msa0712070:intron 25.0%
! GAAAAATGAATAGGAATGTT+CGG - chr5_1:3913560-3913579 Msa0712070:intron 25.0%
! AATTTATCTTTGATGCTGAA+GGG - chr5_1:3913702-3913721 Msa0712070:intron 25.0%
! ATATGGATGTAAAAACAGAA+TGG + chr5_1:3915156-3915175 None:intergenic 25.0%
! TTAATTAGTCAGGAACAATA+TGG + chr5_1:3915173-3915192 None:intergenic 25.0%
! TGATGCAAAATTAATTAGTC+AGG + chr5_1:3915183-3915202 None:intergenic 25.0%
!!! TCAAAGACCTTTATTTTACT+TGG - chr5_1:3915200-3915219 Msa0712070:intron 25.0%
! ATACAAGCCAAGTAAAATAA+AGG + chr5_1:3915210-3915229 None:intergenic 25.0%
!!! TTTATTTTACTTGGCTTGTA+TGG - chr5_1:3915209-3915228 Msa0712070:intron 25.0%
! CAATACTTACTACAGAAATA+TGG - chr5_1:3915262-3915281 Msa0712070:intron 25.0%
! AATATCACCTACAATAATTC+AGG + chr5_1:3915331-3915350 None:intergenic 25.0%
! ATTATTGTAGGTGATATTTG+TGG - chr5_1:3915333-3915352 Msa0712070:intron 25.0%
! TTTAACGGTTAACAAAAATG+AGG - chr5_1:3915490-3915509 Msa0712070:intron 25.0%
! ATAACTATTCTTTACTTCCT+TGG - chr5_1:3915684-3915703 Msa0712070:CDS 25.0%
! TAACTATTCTTTACTTCCTT+GGG - chr5_1:3915685-3915704 Msa0712070:CDS 25.0%
! ACTTAAACTCTGATATGTTA+AGG + chr5_1:3915857-3915876 None:intergenic 25.0%
! TTAACATATCAGAGTTTAAG+TGG - chr5_1:3915856-3915875 Msa0712070:CDS 25.0%
! TTCAGCAAAAGAAATATTGA+GGG + chr5_1:3916402-3916421 None:intergenic 25.0%
! ATTCAGCAAAAGAAATATTG+AGG + chr5_1:3916403-3916422 None:intergenic 25.0%
!!! TTTTTAAAGATATGTTGGCT+CGG + chr5_1:3916529-3916548 None:intergenic 25.0%
!!! TGACCTTTTTAAAGATATGT+TGG + chr5_1:3916534-3916553 None:intergenic 25.0%
! TTTCGTTTATTTGGTTACTA+AGG + chr5_1:3916675-3916694 None:intergenic 25.0%
! AAGTAATACAATTTCCTTTG+AGG - chr5_1:3916773-3916792 Msa0712070:CDS 25.0%
! AAAGTGGGAAAAATAGATAT+TGG + chr5_1:3916801-3916820 None:intergenic 25.0%
!!! TTCTTAATCTCCTTTTTTGA+GGG - chr5_1:3916863-3916882 Msa0712070:intron 25.0%
!! TTCATAAATTTTTCACTGCA+GGG - chr5_1:3917228-3917247 Msa0712070:intron 25.0%
! TTATTATTTGCCAAATGCTT+CGG - chr5_1:3917256-3917275 Msa0712070:intron 25.0%
!! AAGTCCTTTTGTCATTATTA+TGG - chr5_1:3917553-3917572 Msa0712070:CDS 25.0%
! TACTCCATAATAATGACAAA+AGG + chr5_1:3917560-3917579 None:intergenic 25.0%
! CTTTTCATGCAAACAACATA+CGG - chr5_1:3905026-3905045 Msa0712070:three_prime_UTR 30.0%
ATGAAAATAGAGAGTGGAAT+TGG + chr5_1:3905097-3905116 None:intergenic 30.0%
!! GTTTTGATGAAAATAGAGAG+TGG + chr5_1:3905103-3905122 None:intergenic 30.0%
TGAAATTGCAAAGAGAGAAA+TGG + chr5_1:3905125-3905144 None:intergenic 30.0%
TCAAGTAATGATAGAAGAGT+AGG - chr5_1:3905647-3905666 Msa0712070:intron 30.0%
CAAGTAATGATAGAAGAGTA+GGG - chr5_1:3905648-3905667 Msa0712070:intron 30.0%
AAGTAATGATAGAAGAGTAG+GGG - chr5_1:3905649-3905668 Msa0712070:intron 30.0%
!!! TGTGACTTTTTTCTTTGATG+AGG - chr5_1:3905700-3905719 Msa0712070:intron 30.0%
!! AATCGTTTGAAAAGTTGGTA+AGG + chr5_1:3905737-3905756 None:intergenic 30.0%
! ACCAACTTTTCAAACGATTT+AGG - chr5_1:3905738-3905757 Msa0712070:intron 30.0%
TCCTAAATCGTTTGAAAAGT+TGG + chr5_1:3905742-3905761 None:intergenic 30.0%
!!! AGTTGAATTTTTGCTGTTGA+AGG - chr5_1:3905779-3905798 Msa0712070:intron 30.0%
AGGATGAAGTTTGCAAATTA+TGG - chr5_1:3905799-3905818 Msa0712070:intron 30.0%
! TAAAACTGCTCTTTTACTTG+GGG - chr5_1:3905841-3905860 Msa0712070:intron 30.0%
AGAAAAATGTTAGCCAGTTT+GGG - chr5_1:3906049-3906068 Msa0712070:CDS 30.0%
TAAAAGTAGATATGAGCTCA+AGG - chr5_1:3906134-3906153 Msa0712070:CDS 30.0%
AAAAGTAGATATGAGCTCAA+GGG - chr5_1:3906135-3906154 Msa0712070:CDS 30.0%
GTTTAGTCATACTTTCTCAA+TGG - chr5_1:3906199-3906218 Msa0712070:intron 30.0%
GATGTAGGAACATTGTTAAT+TGG - chr5_1:3906249-3906268 Msa0712070:intron 30.0%
ACACAACACAAAAACTTCAA+GGG + chr5_1:3906362-3906381 None:intergenic 30.0%
AACACAACACAAAAACTTCA+AGG + chr5_1:3906363-3906382 None:intergenic 30.0%
TGACATCACATCTTTGTAAT+TGG - chr5_1:3906434-3906453 Msa0712070:intron 30.0%
GACATCACATCTTTGTAATT+GGG - chr5_1:3906435-3906454 Msa0712070:intron 30.0%
GCTAGAACTTAATCACATTA+TGG + chr5_1:3906658-3906677 None:intergenic 30.0%
GAGGGTAATTAAAGTCATAT+TGG - chr5_1:3907767-3907786 Msa0712070:intron 30.0%
TACACATAACCCCAAAAAAT+TGG - chr5_1:3907912-3907931 Msa0712070:intron 30.0%
TTGTTTGCACTAAATCCAAT+CGG - chr5_1:3907970-3907989 Msa0712070:intron 30.0%
TCTGTATTTCTCCTCTAATT+TGG - chr5_1:3908032-3908051 Msa0712070:intron 30.0%
! CAGTAATCATTAACTTGAAC+TGG - chr5_1:3908080-3908099 Msa0712070:intron 30.0%
! ACGTTAAAAACGTGTTTTGT+AGG + chr5_1:3908166-3908185 None:intergenic 30.0%
! TACAAAACACGTTTTTAACG+TGG - chr5_1:3908165-3908184 Msa0712070:intron 30.0%
! ACAAAACACGTTTTTAACGT+GGG - chr5_1:3908166-3908185 Msa0712070:intron 30.0%
! TTCTTTACAGGTTTTCTTGT+CGG + chr5_1:3908197-3908216 None:intergenic 30.0%
TTATGCTTACAATCTTACAG+TGG + chr5_1:3908280-3908299 None:intergenic 30.0%
! CTTAACTGTCATTTACATTG+TGG + chr5_1:3908332-3908351 None:intergenic 30.0%
! TTTATCCAAATTGGGTTTTC+AGG - chr5_1:3908376-3908395 Msa0712070:intron 30.0%
TTACCATATATATGCTGTGT+TGG - chr5_1:3908475-3908494 Msa0712070:intron 30.0%
ATACCAACACAGCATATATA+TGG + chr5_1:3908481-3908500 None:intergenic 30.0%
TGAAATAAAAGCTGTCAACT+AGG + chr5_1:3908567-3908586 None:intergenic 30.0%
TTATGAAATGCAGATCATCT+TGG - chr5_1:3908639-3908658 Msa0712070:intron 30.0%
TATCTCAAGGATGTTACTAT+TGG - chr5_1:3908670-3908689 Msa0712070:intron 30.0%
! ATTAAAATACCTGGTTCTTG+AGG - chr5_1:3908702-3908721 Msa0712070:intron 30.0%
GTCCAAAAATTCACAATCAA+TGG + chr5_1:3908823-3908842 None:intergenic 30.0%
AGAAGAATAAGACATCTGTT+TGG + chr5_1:3908902-3908921 None:intergenic 30.0%
CTCTCAAACAAAAAGAGATT+TGG + chr5_1:3908932-3908951 None:intergenic 30.0%
!! CAAATCTCTTTTTGTTTGAG+AGG - chr5_1:3908930-3908949 Msa0712070:CDS 30.0%
CTCATCTACTAATTGTGTTT+AGG - chr5_1:3909101-3909120 Msa0712070:intron 30.0%
CATACATACATACATACATG+AGG - chr5_1:3909375-3909394 Msa0712070:CDS 30.0%
ATTAAAAAGAATCAAGGGCA+TGG + chr5_1:3909446-3909465 None:intergenic 30.0%
AAATTGAGAATGTGTTTAGG+AGG + chr5_1:3909526-3909545 None:intergenic 30.0%
! ACAACAGGTTCAATTTTTCT+GGG + chr5_1:3909561-3909580 None:intergenic 30.0%
ATTGTGAAATTCAAAACCTG+TGG + chr5_1:3909701-3909720 None:intergenic 30.0%
TTGAATTTCACAATCATCAC+AGG - chr5_1:3909707-3909726 Msa0712070:intron 30.0%
TCCAGAAATTCTAACATGAA+CGG - chr5_1:3909803-3909822 Msa0712070:intron 30.0%
AAAGAATGAAGTGATATCCT+TGG - chr5_1:3909843-3909862 Msa0712070:intron 30.0%
! GTAATTCAAGTTTCTCTTAG+GGG + chr5_1:3910105-3910124 None:intergenic 30.0%
! GTGTAATTCAAGTTTCTCTT+AGG + chr5_1:3910107-3910126 None:intergenic 30.0%
TGTAATTCAAGCATCCTTTA+GGG + chr5_1:3910137-3910156 None:intergenic 30.0%
TTGTAATTCAAGCATCCTTT+AGG + chr5_1:3910138-3910157 None:intergenic 30.0%
TGTAATTCAAGCATCTTTGA+GGG + chr5_1:3910392-3910411 None:intergenic 30.0%
! TATTTTCACATAAGAAGGGA+GGG + chr5_1:3910418-3910437 None:intergenic 30.0%
! ATATTTTCACATAAGAAGGG+AGG + chr5_1:3910419-3910438 None:intergenic 30.0%
!! ATATTTTGAATAAGAGGGGA+GGG + chr5_1:3910448-3910467 None:intergenic 30.0%
!! TATATTTTGAATAAGAGGGG+AGG + chr5_1:3910449-3910468 None:intergenic 30.0%
!! TTCAAACTTCTTTTAAGGGA+CGG + chr5_1:3910490-3910509 None:intergenic 30.0%
!! CGTAGATTTTAACATAAGAG+GGG + chr5_1:3910525-3910544 None:intergenic 30.0%
!! GCGTAGATTTTAACATAAGA+GGG + chr5_1:3910526-3910545 None:intergenic 30.0%
!! AGCGTAGATTTTAACATAAG+AGG + chr5_1:3910527-3910546 None:intergenic 30.0%
!! AATTTTACTTTTCAAGGGAG+GGG - chr5_1:3911034-3911053 Msa0712070:intron 30.0%
GTGAAATTCAAGTATCTTTG+AGG - chr5_1:3911088-3911107 Msa0712070:intron 30.0%
GAAATTCAAGTATCTTTGAG+GGG - chr5_1:3911090-3911109 Msa0712070:intron 30.0%
!! AAATTTTAACATAAGAGGGG+AGG - chr5_1:3911135-3911154 Msa0712070:intron 30.0%
!! AATTTTAACATAAGAGGGGA+GGG - chr5_1:3911136-3911155 Msa0712070:intron 30.0%
ATGTAATTCAAGCTTCTCTT+TGG - chr5_1:3911161-3911180 Msa0712070:intron 30.0%
TGTAATTCAAGCTTCTCTTT+GGG - chr5_1:3911162-3911181 Msa0712070:intron 30.0%
GTGTAATTCAAGCATATTTG+AGG - chr5_1:3911264-3911283 Msa0712070:intron 30.0%
GTAATTCAAGCATATTTGAG+GGG - chr5_1:3911266-3911285 Msa0712070:intron 30.0%
CTACAAACTTACTCCAAATT+TGG + chr5_1:3911323-3911342 None:intergenic 30.0%
TTCCATAAAAAGGTTAGAAC+TGG - chr5_1:3911521-3911540 Msa0712070:intron 30.0%
!! TACCAGTTCTAACCTTTTTA+TGG + chr5_1:3911526-3911545 None:intergenic 30.0%
TGTTAGCAGTTATCTTAGTT+AGG + chr5_1:3911766-3911785 None:intergenic 30.0%
ATAAATATCATAGGAGAACC+AGG + chr5_1:3911837-3911856 None:intergenic 30.0%
TGCAGTATAATAGAGAATAG+AGG - chr5_1:3911983-3912002 Msa0712070:intron 30.0%
!! CTTTTGTTTAAACTCTTCCA+TGG + chr5_1:3912049-3912068 None:intergenic 30.0%
! TCTTTTGGATGTATAACTCA+AGG + chr5_1:3912587-3912606 None:intergenic 30.0%
!!! GGTTTTTTCTTTGTTCTAGA+AGG - chr5_1:3912894-3912913 Msa0712070:intron 30.0%
ACTACGTGATGAGTATTATT+GGG + chr5_1:3913148-3913167 None:intergenic 30.0%
AACTACGTGATGAGTATTAT+TGG + chr5_1:3913149-3913168 None:intergenic 30.0%
ACGACAAACAATTTATCAGA+TGG + chr5_1:3913201-3913220 None:intergenic 30.0%
ATTATCAGTAACAATTGACC+GGG + chr5_1:3913259-3913278 None:intergenic 30.0%
GATTATCAGTAACAATTGAC+CGG + chr5_1:3913260-3913279 None:intergenic 30.0%
TTCTTCATTCTGTTCTTCAT+TGG + chr5_1:3913340-3913359 None:intergenic 30.0%
TACTTGACATGGTTAATACT+CGG + chr5_1:3913476-3913495 None:intergenic 30.0%
TGTATATTCTCTTTCTGAAC+AGG - chr5_1:3913631-3913650 Msa0712070:intron 30.0%
GCATCAAAGATAAATTCTTC+AGG + chr5_1:3913698-3913717 None:intergenic 30.0%
GAATTTATCTTTGATGCTGA+AGG - chr5_1:3913701-3913720 Msa0712070:intron 30.0%
ATTTATCTTTGATGCTGAAG+GGG - chr5_1:3913703-3913722 Msa0712070:intron 30.0%
TAGTCGTATAACAAACGAAT+GGG + chr5_1:3913868-3913887 None:intergenic 30.0%
!! CATTTGATTTTATACCCGAT+TGG + chr5_1:3913966-3913985 None:intergenic 30.0%
ATCAACTTGCATATATGTCA+CGG - chr5_1:3914001-3914020 Msa0712070:intron 30.0%
TTGTTGAAAAAACTGACATG+AGG - chr5_1:3914253-3914272 Msa0712070:intron 30.0%
TGTTGAAAAAACTGACATGA+GGG - chr5_1:3914254-3914273 Msa0712070:intron 30.0%
!! GCAGGGATTAATTTTGATAA+CGG + chr5_1:3914467-3914486 None:intergenic 30.0%
TCAAAGTAACGCAAATTGTA+GGG + chr5_1:3914565-3914584 None:intergenic 30.0%
TTCAAAGTAACGCAAATTGT+AGG + chr5_1:3914566-3914585 None:intergenic 30.0%
!! ACAGGGACTAATTTTGATAA+CGG - chr5_1:3914744-3914763 Msa0712070:intron 30.0%
! TTCAAAGGGCATAAAATGTA+AGG - chr5_1:3914817-3914836 Msa0712070:intron 30.0%
!! CTAAACTTTTAAGGATGCAT+AGG - chr5_1:3914997-3915016 Msa0712070:intron 30.0%
! CTTTTCTAATACAGTGATTC+TGG + chr5_1:3915783-3915802 None:intergenic 30.0%
AACTCTGATATGTTAAGGTT+AGG + chr5_1:3915852-3915871 None:intergenic 30.0%
GTTTAAGTGGTGATATTTGT+TGG - chr5_1:3915869-3915888 Msa0712070:intron 30.0%
TCCAACTATTGACATGTTTA+AGG - chr5_1:3916219-3916238 Msa0712070:intron 30.0%
TCCTTAAACATGTCAATAGT+TGG + chr5_1:3916223-3916242 None:intergenic 30.0%
! CATTGTCATTTGCAAATAAG+TGG + chr5_1:3916256-3916275 None:intergenic 30.0%
CACTTATTTGCAAATGACAA+TGG - chr5_1:3916254-3916273 Msa0712070:intron 30.0%
! GAGCCAACATATCTTTAAAA+AGG - chr5_1:3916528-3916547 Msa0712070:intron 30.0%
ATTCTTGTGATGTAGGTTTA+GGG + chr5_1:3916589-3916608 None:intergenic 30.0%
AATTCTTGTGATGTAGGTTT+AGG + chr5_1:3916590-3916609 None:intergenic 30.0%
! AGGAGATGTTTTATCTCATT+TGG + chr5_1:3916655-3916674 None:intergenic 30.0%
AACTTTCATTTCATGTATGG+TGG - chr5_1:3916707-3916726 Msa0712070:CDS 30.0%
ACTTTCATTTCATGTATGGT+GGG - chr5_1:3916708-3916727 Msa0712070:CDS 30.0%
AATAGATATTGGAACCTCAA+AGG + chr5_1:3916790-3916809 None:intergenic 30.0%
!!! CTTCTTAATCTCCTTTTTTG+AGG - chr5_1:3916862-3916881 Msa0712070:intron 30.0%
!!! TCTTAATCTCCTTTTTTGAG+GGG - chr5_1:3916864-3916883 Msa0712070:intron 30.0%
! ACAATTTTTCCCCTCAAAAA+AGG + chr5_1:3916876-3916895 None:intergenic 30.0%
CTGTGAATTTATGCAGATTT+AGG + chr5_1:3916954-3916973 None:intergenic 30.0%
CTAAATCTGCATAAATTCAC+AGG - chr5_1:3916952-3916971 Msa0712070:intron 30.0%
!!! TACTGACTCTGTTTTAATGA+AGG - chr5_1:3917024-3917043 Msa0712070:intron 30.0%
AATGAAGGATGAAATTCTTG+AGG - chr5_1:3917039-3917058 Msa0712070:intron 30.0%
! GTTCATAAATTTTTCACTGC+AGG - chr5_1:3917227-3917246 Msa0712070:intron 30.0%
ATTGCACAACTATAAATGAC+TGG - chr5_1:3917402-3917421 Msa0712070:CDS 30.0%
!! TATTTTTCTAACTTGTGAGG+AGG - chr5_1:3917500-3917519 Msa0712070:CDS 30.0%
!! ATTTTTCTAACTTGTGAGGA+GGG - chr5_1:3917501-3917520 Msa0712070:CDS 30.0%
!!! TTCTAGAACGCTTTTGTTTA+TGG + chr5_1:3917599-3917618 None:intergenic 30.0%
AGATTCCAAAATTGGGTATA+CGG - chr5_1:3917622-3917641 Msa0712070:five_prime_UTR 30.0%
ATGCAAACAACATACGGAAT+GGG - chr5_1:3905032-3905051 Msa0712070:three_prime_UTR 35.0%
ACACACACTATGGGTTTATT+TGG + chr5_1:3905541-3905560 None:intergenic 35.0%
GCAAATTATGGTTGTTATGC+AGG - chr5_1:3905811-3905830 Msa0712070:intron 35.0%
AGGAACTGCTAAAACGATAA+TGG - chr5_1:3905907-3905926 Msa0712070:intron 35.0%
GAACCTTCTACTACTTCAAT+AGG + chr5_1:3905959-3905978 None:intergenic 35.0%
GAGAAAAATGTTAGCCAGTT+TGG - chr5_1:3906048-3906067 Msa0712070:CDS 35.0%
GAAAAATGTTAGCCAGTTTG+GGG - chr5_1:3906050-3906069 Msa0712070:CDS 35.0%
TATTTCTCAATTCCCCAAAC+TGG + chr5_1:3906065-3906084 None:intergenic 35.0%
!! TCATGCATAGTTGATGATGT+AGG - chr5_1:3906234-3906253 Msa0712070:intron 35.0%
!! ACTTCTGGTTCAAACTACTA+AGG + chr5_1:3906332-3906351 None:intergenic 35.0%
! TTCAAGGGATATGTTACTTC+TGG + chr5_1:3906347-3906366 None:intergenic 35.0%
CAAAGATGTGATGTCAATCA+TGG + chr5_1:3906430-3906449 None:intergenic 35.0%
CTGAATAGTACCTGAACAAA+GGG + chr5_1:3906623-3906642 None:intergenic 35.0%
TCTGAATAGTACCTGAACAA+AGG + chr5_1:3906624-3906643 None:intergenic 35.0%
TTTATGCTTCAGATTCCTCT+TGG - chr5_1:3906746-3906765 Msa0712070:intron 35.0%
!! CTCCTTAATGTATTGACTGA+AGG - chr5_1:3906923-3906942 Msa0712070:intron 35.0%
CTCCTTCAGTCAATACATTA+AGG + chr5_1:3906928-3906947 None:intergenic 35.0%
TTATAGGTAGCAATCAGAAG+GGG + chr5_1:3906998-3907017 None:intergenic 35.0%
GTTATAGGTAGCAATCAGAA+GGG + chr5_1:3906999-3907018 None:intergenic 35.0%
! ATCGCATTGCAATTAACTTG+AGG - chr5_1:3907053-3907072 Msa0712070:intron 35.0%
! TTTTCCTCCCTTTACAAGAT+AGG - chr5_1:3907120-3907139 Msa0712070:intron 35.0%
GAGACAAATACGGAAGAAAT+CGG + chr5_1:3907345-3907364 None:intergenic 35.0%
TTACAATTTGGCATCTGACA+TGG - chr5_1:3907449-3907468 Msa0712070:intron 35.0%
! ACACGGTTTTCAAAACTCAT+TGG + chr5_1:3907646-3907665 None:intergenic 35.0%
ACAGAATTTCAGGATAACTG+TGG - chr5_1:3907685-3907704 Msa0712070:intron 35.0%
! CTGTGGCGAAGTATTTAAAA+TGG - chr5_1:3907702-3907721 Msa0712070:intron 35.0%
ATGACTTTAATTACCCTCCT+AGG + chr5_1:3907765-3907784 None:intergenic 35.0%
TGGAAAAGTGAAGAACAGAT+AGG - chr5_1:3907787-3907806 Msa0712070:intron 35.0%
AAGAACAGATAGGAAACACT+AGG - chr5_1:3907797-3907816 Msa0712070:intron 35.0%
AGAACAGATAGGAAACACTA+GGG - chr5_1:3907798-3907817 Msa0712070:intron 35.0%
AATCATCCTGATTCAGATTC+AGG + chr5_1:3907848-3907867 None:intergenic 35.0%
AGGATGATTGCAAAATCACA+AGG - chr5_1:3907859-3907878 Msa0712070:intron 35.0%
GGATGATTGCAAAATCACAA+GGG - chr5_1:3907860-3907879 Msa0712070:intron 35.0%
GAAGAACACGAGTTATAGAT+AGG - chr5_1:3907889-3907908 Msa0712070:intron 35.0%
AATTAGTGCAAAGTTTGCGA+GGG + chr5_1:3907952-3907971 None:intergenic 35.0%
AGAGATCACAACCAAATTAG+AGG + chr5_1:3908046-3908065 None:intergenic 35.0%
TACATTGTGGAAATGACACT+AGG + chr5_1:3908319-3908338 None:intergenic 35.0%
AAATACTTCTCCTGAAACCT+AGG + chr5_1:3908768-3908787 None:intergenic 35.0%
ATCTAATAGTTAGAGGCAGA+GGG + chr5_1:3909003-3909022 None:intergenic 35.0%
AATCTAATAGTTAGAGGCAG+AGG + chr5_1:3909004-3909023 None:intergenic 35.0%
GTTTAAACCAATCAAGTGAG+CGG - chr5_1:3909036-3909055 Msa0712070:intron 35.0%
TTTAAACCAATCAAGTGAGC+GGG - chr5_1:3909037-3909056 Msa0712070:intron 35.0%
GTATTAGTGAGACCAAAGAA+AGG - chr5_1:3909169-3909188 Msa0712070:intron 35.0%
ACATACATACATACATGAGG+AGG - chr5_1:3909378-3909397 Msa0712070:CDS 35.0%
CATACATACATACATGAGGA+GGG - chr5_1:3909379-3909398 Msa0712070:CDS 35.0%
GTAGTCTAGAGACTTAATCT+TGG + chr5_1:3909416-3909435 None:intergenic 35.0%
! CACAACAGGTTCAATTTTTC+TGG + chr5_1:3909562-3909581 None:intergenic 35.0%
CAGAAAAATTGAACCTGTTG+TGG - chr5_1:3909560-3909579 Msa0712070:intron 35.0%
TGCTATGATGCAAATCATAG+TGG - chr5_1:3909624-3909643 Msa0712070:intron 35.0%
! AGTGGTCATCTCTCAATTTT+TGG - chr5_1:3909642-3909661 Msa0712070:intron 35.0%
TCCGTTCATGTTAGAATTTC+TGG + chr5_1:3909807-3909826 None:intergenic 35.0%
GTAATTCAAGCATCCTTTAG+GGG + chr5_1:3910136-3910155 None:intergenic 35.0%
GTAATTCAAGCATCTTTGAG+GGG + chr5_1:3910391-3910410 None:intergenic 35.0%
GTGTAATTCAAGCATCTTTG+AGG + chr5_1:3910393-3910412 None:intergenic 35.0%
! ATTTTCACATAAGAAGGGAG+GGG + chr5_1:3910417-3910436 None:intergenic 35.0%
!! TCAAACTTCTTTTAAGGGAC+GGG + chr5_1:3910489-3910508 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG + chr5_1:3911137-3911156 None:intergenic 35.0%
!! GATTTTAACATAAGAGGGGA+GGG + chr5_1:3910521-3910540 None:intergenic 35.0%
!! AGATTTTAACATAAGAGGGG+AGG + chr5_1:3910522-3910541 None:intergenic 35.0%
!!! ATATTTTAACACAAGAGGGG+AGG - chr5_1:3911062-3911081 Msa0712070:intron 35.0%
!!! TATTTTAACACAAGAGGGGA+GGG - chr5_1:3911063-3911082 Msa0712070:intron 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG - chr5_1:3911137-3911156 Msa0712070:intron 35.0%
GTAATTCAAGCTTCTCTTTG+GGG - chr5_1:3911163-3911182 Msa0712070:intron 35.0%
CTAAATGAAGGGTCCAAATT+TGG - chr5_1:3911307-3911326 Msa0712070:intron 35.0%
AATCACACACCAGAACATAA+AGG - chr5_1:3911639-3911658 Msa0712070:intron 35.0%
CTAGACTTTCCTTTATGTTC+TGG + chr5_1:3911651-3911670 None:intergenic 35.0%
GTTAAGGTGGTATCTTAGTT+AGG + chr5_1:3911811-3911830 None:intergenic 35.0%
TACAGTGTATAGTGAGAAAG+AGG - chr5_1:3911952-3911971 Msa0712070:intron 35.0%
!! AAATTGACTTGGTGATACCA+TGG - chr5_1:3912029-3912048 Msa0712070:intron 35.0%
ACTTAAATTATCAGACCACG+CGG + chr5_1:3912162-3912181 None:intergenic 35.0%
!! AAGTACTTGTTATGAACTGC+AGG - chr5_1:3912178-3912197 Msa0712070:intron 35.0%
!! AGTACTTGTTATGAACTGCA+GGG - chr5_1:3912179-3912198 Msa0712070:intron 35.0%
!!! GAAAGCTTACGGCTTTTTTA+AGG + chr5_1:3912286-3912305 None:intergenic 35.0%
! GTCAATAGTTTGAAGTATGG+AGG - chr5_1:3912370-3912389 Msa0712070:intron 35.0%
ACTAAGTGTTCATGGATGAT+AGG + chr5_1:3912411-3912430 None:intergenic 35.0%
TATCATCCATGAACACTTAG+TGG - chr5_1:3912410-3912429 Msa0712070:intron 35.0%
TATTGACCACTAAGTGTTCA+TGG + chr5_1:3912419-3912438 None:intergenic 35.0%
! ATTTTAAATGTGTGGGACAC+AGG + chr5_1:3912447-3912466 None:intergenic 35.0%
TCGGGACTAAAAACAATTAG+TGG + chr5_1:3912529-3912548 None:intergenic 35.0%
! TTTCACCCTTCCTTTTTAAC+AGG + chr5_1:3912555-3912574 None:intergenic 35.0%
!! TGAAGTATAGGGTTTTATCC+TGG - chr5_1:3912929-3912948 Msa0712070:intron 35.0%
AATCAAACTTGATCTCGGTT+AGG - chr5_1:3913041-3913060 Msa0712070:intron 35.0%
AGTACAAGAATCACTGTGAA+TGG - chr5_1:3913101-3913120 Msa0712070:intron 35.0%
TTATCAGTAACAATTGACCG+GGG + chr5_1:3913258-3913277 None:intergenic 35.0%
!!! TTGGATTCTTGGTTTTGTGA+AGG + chr5_1:3913321-3913340 None:intergenic 35.0%
TCTGTTCTTCATTGGATTCT+TGG + chr5_1:3913332-3913351 None:intergenic 35.0%
ACAGAATGAAGAAGACAAAG+AGG - chr5_1:3913347-3913366 Msa0712070:intron 35.0%
ATTAACCATGTCAAGTACAG+TGG - chr5_1:3913479-3913498 Msa0712070:intron 35.0%
TTAACCATGTCAAGTACAGT+GGG - chr5_1:3913480-3913499 Msa0712070:intron 35.0%
CAAATTATATAGGTACGGTG+AGG + chr5_1:3913613-3913632 None:intergenic 35.0%
TTTATCTTTGATGCTGAAGG+GGG - chr5_1:3913704-3913723 Msa0712070:intron 35.0%
! GTTATATTTTCAGAGGACAG+AGG - chr5_1:3913803-3913822 Msa0712070:intron 35.0%
!! GAAGCATTGGCTTGATATAT+CGG + chr5_1:3913829-3913848 None:intergenic 35.0%
AGTCGTATAACAAACGAATG+GGG + chr5_1:3913867-3913886 None:intergenic 35.0%
GTAGTCGTATAACAAACGAA+TGG + chr5_1:3913869-3913888 None:intergenic 35.0%
AAACAGTAGCATCATTTAGC+GGG + chr5_1:3914129-3914148 None:intergenic 35.0%
CAAACAGTAGCATCATTTAG+CGG + chr5_1:3914130-3914149 None:intergenic 35.0%
TAAATGATGCTACTGTTTGC+AGG - chr5_1:3914131-3914150 Msa0712070:intron 35.0%
AAATGATGCTACTGTTTGCA+GGG - chr5_1:3914132-3914151 Msa0712070:intron 35.0%
TCAACTGCTAATCTCTTTAC+AGG + chr5_1:3914159-3914178 None:intergenic 35.0%
ACCTTATCAAAAGTTGCGAA+GGG - chr5_1:3914200-3914219 Msa0712070:intron 35.0%
!! GATAACGGAGATAAAATGTG+AGG + chr5_1:3914452-3914471 None:intergenic 35.0%
TCGTTAGAGAATTAACAGCA+GGG + chr5_1:3914484-3914503 None:intergenic 35.0%
TTCGTTAGAGAATTAACAGC+AGG + chr5_1:3914485-3914504 None:intergenic 35.0%
TCTCTAACGAAATACTGATG+TGG - chr5_1:3914494-3914513 Msa0712070:intron 35.0%
!! AGTGGGTCCCAATTATTTTA+AGG - chr5_1:3914522-3914541 Msa0712070:intron 35.0%
TTCAAAGTCACGCAAAATGT+AGG - chr5_1:3914645-3914664 Msa0712070:intron 35.0%
TCAAAGTCACGCAAAATGTA+GGG - chr5_1:3914646-3914665 Msa0712070:intron 35.0%
!! AGTGGGTCCCAATTATTTTA+AGG + chr5_1:3914522-3914541 None:intergenic 35.0%
TCCGTTAGAGAATTAACAAC+AGG - chr5_1:3914726-3914745 Msa0712070:intron 35.0%
CCCTGTTGTTAATTCTCTAA+CGG + chr5_1:3914730-3914749 None:intergenic 35.0%
CCGTTAGAGAATTAACAACA+GGG - chr5_1:3914727-3914746 Msa0712070:intron 35.0%
!! TGATAACGGAGATAAATGTG+AGG - chr5_1:3914758-3914777 Msa0712070:intron 35.0%
ATGTAGGGACTATTCTTCAA+AGG - chr5_1:3914802-3914821 Msa0712070:intron 35.0%
TGTAGGGACTATTCTTCAAA+GGG - chr5_1:3914803-3914822 Msa0712070:intron 35.0%
AGAAGAATTAAAGGACACCA+AGG + chr5_1:3914936-3914955 None:intergenic 35.0%
! TAAGTATTGTCAGAGCAAAC+TGG + chr5_1:3915251-3915270 None:intergenic 35.0%
CTTATACGAAACCCAAATAG+TGG + chr5_1:3915549-3915568 None:intergenic 35.0%
ACAAAGTAACTGTTCTCCTT+AGG + chr5_1:3915635-3915654 None:intergenic 35.0%
TATAAACTGCTTGAGTTCTC+AGG + chr5_1:3915660-3915679 None:intergenic 35.0%
!!! TTGGTACCTGTTATTTTCAG+AGG - chr5_1:3915718-3915737 Msa0712070:CDS 35.0%
! CTGTAACCTCTGAAAATAAC+AGG + chr5_1:3915727-3915746 None:intergenic 35.0%
!! AATACAGTGATTCTGGTTCA+AGG + chr5_1:3915776-3915795 None:intergenic 35.0%
GTATCAATAATTCCTTTCCG+TGG - chr5_1:3915951-3915970 Msa0712070:intron 35.0%
TTGCTTTCTACATTTGACCT+CGG + chr5_1:3916159-3916178 None:intergenic 35.0%
TGAAAATGTCTAGGCTGTTA+GGG - chr5_1:3916439-3916458 Msa0712070:intron 35.0%
GGATTAAATGCAGAGAAAAG+TGG - chr5_1:3916464-3916483 Msa0712070:intron 35.0%
ATGATTGTTGCAATCACTGA+TGG - chr5_1:3916503-3916522 Msa0712070:intron 35.0%
TTCTTGTGATGTAGGTTTAG+GGG + chr5_1:3916588-3916607 None:intergenic 35.0%
ACCTACATCACAAGAATTGA+AGG - chr5_1:3916592-3916611 Msa0712070:intron 35.0%
ACCTTCAATTCTTGTGATGT+AGG + chr5_1:3916596-3916615 None:intergenic 35.0%
CATCACAAGAATTGAAGGTA+CGG - chr5_1:3916597-3916616 Msa0712070:intron 35.0%
!! TATGGTGGGTAGCTATTTAT+GGG - chr5_1:3916722-3916741 Msa0712070:CDS 35.0%
!! TCTATTTTTCCCACTTTGAG+AGG - chr5_1:3916804-3916823 Msa0712070:intron 35.0%
GCTGGGAAGATATATAAATC+AGG - chr5_1:3917064-3917083 Msa0712070:intron 35.0%
! TGTTTTCAGTGTCAATGACA+AGG + chr5_1:3917099-3917118 None:intergenic 35.0%
GAAAACAAGTTTGTCTCAAC+AGG - chr5_1:3917112-3917131 Msa0712070:intron 35.0%
GTAAAAAAATTGGGATGGGA+AGG + chr5_1:3917367-3917386 None:intergenic 35.0%
CACAACTATAAATGACTGGT+GGG - chr5_1:3917406-3917425 Msa0712070:CDS 35.0%
! TTAGTCCGTATACCCAATTT+TGG + chr5_1:3917630-3917649 None:intergenic 35.0%
CATGCAAACAACATACGGAA+TGG - chr5_1:3905031-3905050 Msa0712070:three_prime_UTR 40.0%
GAGTTGAAGATTAGTGTGAG+GGG + chr5_1:3905075-3905094 None:intergenic 40.0%
GGAGTTGAAGATTAGTGTGA+GGG + chr5_1:3905076-3905095 None:intergenic 40.0%
TGGAGTTGAAGATTAGTGTG+AGG + chr5_1:3905077-3905096 None:intergenic 40.0%
! TCAATCTGAAAATGGTGCTG+CGG - chr5_1:3905193-3905212 Msa0712070:three_prime_UTR 40.0%
AAGCTCGATGCTAGTACTTA+TGG - chr5_1:3905242-3905261 Msa0712070:three_prime_UTR 40.0%
AGCATAGTCACACACACTAT+GGG + chr5_1:3905550-3905569 None:intergenic 40.0%
GATAGAAGAGTAGGGGAAAA+TGG - chr5_1:3905656-3905675 Msa0712070:intron 40.0%
ATTGGAGGGATTGCTATATC+AGG - chr5_1:3905878-3905897 Msa0712070:intron 40.0%
CCTTCTACTACTTCAATAGG+CGG + chr5_1:3905956-3905975 None:intergenic 40.0%
AGAATCATATTCCACGCGTT+GGG + chr5_1:3906567-3906586 None:intergenic 40.0%
TGTCAAATCTCCCTTTGTTC+AGG - chr5_1:3906610-3906629 Msa0712070:CDS 40.0%
! CATTGGATCAGTTGATGTTG+AGG - chr5_1:3906787-3906806 Msa0712070:intron 40.0%
AAAGAGAGGGAATCAGCTTT+AGG - chr5_1:3906960-3906979 Msa0712070:intron 40.0%
GGTTATAGGTAGCAATCAGA+AGG + chr5_1:3907000-3907019 None:intergenic 40.0%
ATCTACAATGTTGCTCCTTC+AGG - chr5_1:3907086-3907105 Msa0712070:intron 40.0%
TCTTGGGCCTATCTTGTAAA+GGG + chr5_1:3907130-3907149 None:intergenic 40.0%
ATCTTGGGCCTATCTTGTAA+AGG + chr5_1:3907131-3907150 None:intergenic 40.0%
GAGAGAGAGAGAGACAAATA+CGG + chr5_1:3907355-3907374 None:intergenic 40.0%
!! AATGAACCAGCTGTTGTTTC+CGG + chr5_1:3907408-3907427 None:intergenic 40.0%
TGGAATTGCGACAGAATTTC+AGG - chr5_1:3907675-3907694 Msa0712070:intron 40.0%
TACAGACAATGCAAAGACAC+AGG - chr5_1:3907735-3907754 Msa0712070:intron 40.0%
ATCCTGATTCAGATTCAGGA+AGG + chr5_1:3907844-3907863 None:intergenic 40.0%
TGATTGCAAAATCACAAGGG+AGG - chr5_1:3907863-3907882 Msa0712070:intron 40.0%
!!! GAGGACTCTCCAATTTTTTG+GGG + chr5_1:3907924-3907943 None:intergenic 40.0%
!!! CGAGGACTCTCCAATTTTTT+GGG + chr5_1:3907925-3907944 None:intergenic 40.0%
CAATTAGTGCAAAGTTTGCG+AGG + chr5_1:3907953-3907972 None:intergenic 40.0%
GGAAATAGTAGAGATCCGAT+TGG + chr5_1:3907988-3908007 None:intergenic 40.0%
! CGTGTTTTGTAGGCAGAATA+AGG + chr5_1:3908156-3908175 None:intergenic 40.0%
TATTACGTTCATAGGGCTTC+AGG + chr5_1:3908226-3908245 None:intergenic 40.0%
GACAGTTAAGATAGATGGTG+AGG - chr5_1:3908342-3908361 Msa0712070:intron 40.0%
CTTGACCTGAAAACCCAATT+TGG + chr5_1:3908384-3908403 None:intergenic 40.0%
AGGTTTACAAAGTCTCAGCT+CGG + chr5_1:3908436-3908455 None:intergenic 40.0%
! CTTGTTACAGAGCATTTACC+TGG + chr5_1:3908744-3908763 None:intergenic 40.0%
AATGCTCTGTAACAAGTCCT+AGG - chr5_1:3908748-3908767 Msa0712070:intron 40.0%
TGTAACAAGTCCTAGGTTTC+AGG - chr5_1:3908755-3908774 Msa0712070:intron 40.0%
! AAGAATCAAGGGCATGGAAT+TGG + chr5_1:3909440-3909459 None:intergenic 40.0%
TGAGAATGTGTTTAGGAGGA+AGG + chr5_1:3909522-3909541 None:intergenic 40.0%
GAAACGTACTGGAGTTTCAA+AGG - chr5_1:3909957-3909976 Msa0712070:intron 40.0%
! GATGCAATGCTCAAGAGTTT+TGG - chr5_1:3909993-3910012 Msa0712070:intron 40.0%
!!! CAATGCTCAAGAGTTTTGGA+AGG - chr5_1:3909997-3910016 Msa0712070:intron 40.0%
! TTCAAGTTTCTCTTAGGGGA+GGG + chr5_1:3910101-3910120 None:intergenic 40.0%
! ATTCAAGTTTCTCTTAGGGG+AGG + chr5_1:3910102-3910121 None:intergenic 40.0%
ATTCAAGCATCTTATAGGGG+AGG - chr5_1:3911003-3911022 Msa0712070:intron 40.0%
TTCAAGCATCTTATAGGGGA+GGG - chr5_1:3911004-3911023 Msa0712070:intron 40.0%
!! ATTTTAACACAAGAGGGGAG+GGG - chr5_1:3911064-3911083 Msa0712070:intron 40.0%
! ATTCAAGTATCTTTGAGGGG+AGG - chr5_1:3911093-3911112 Msa0712070:intron 40.0%
! TTCAAGTATCTTTGAGGGGA+GGG - chr5_1:3911094-3911113 Msa0712070:intron 40.0%
ATTCAAGCATATTTGAGGGG+AGG - chr5_1:3911269-3911288 Msa0712070:intron 40.0%
TTCAAGCATATTTGAGGGGA+GGG - chr5_1:3911270-3911289 Msa0712070:intron 40.0%
AGGATAGGAGCAGAAATTGT+AGG - chr5_1:3911564-3911583 Msa0712070:intron 40.0%
AGGATAAATCCTCTGCAGAA+TGG - chr5_1:3911584-3911603 Msa0712070:intron 40.0%
!!! GTTTTAAGACCATTCTGCAG+AGG + chr5_1:3911596-3911615 None:intergenic 40.0%
! GCAGAATGGTCTTAAAACAG+AGG - chr5_1:3911598-3911617 Msa0712070:intron 40.0%
AAAGGAAAGTCTAGAGAGAC+AGG - chr5_1:3911657-3911676 Msa0712070:intron 40.0%
GTAGTGGTTATGTTCATAGG+AGG + chr5_1:3912348-3912367 None:intergenic 40.0%
TTCAAACTATTGACGCGTAG+TGG + chr5_1:3912364-3912383 None:intergenic 40.0%
! CGCGTCAATAGTTTGAAGTA+TGG - chr5_1:3912367-3912386 Msa0712070:intron 40.0%
GTGTTCATGGATGATAGGAA+AGG + chr5_1:3912406-3912425 None:intergenic 40.0%
! TTCCTTTTTAACAGGCTGTC+GGG + chr5_1:3912547-3912566 None:intergenic 40.0%
! CTTCCTTTTTAACAGGCTGT+CGG + chr5_1:3912548-3912567 None:intergenic 40.0%
GACAGCCTGTTAAAAAGGAA+GGG - chr5_1:3912547-3912566 Msa0712070:intron 40.0%
TCACAAAGCTCGAAAACAGA+AGG + chr5_1:3912692-3912711 None:intergenic 40.0%
AGACTGAGATGCTGAAGTAT+AGG - chr5_1:3912917-3912936 Msa0712070:intron 40.0%
GACTGAGATGCTGAAGTATA+GGG - chr5_1:3912918-3912937 Msa0712070:intron 40.0%
ATAGAGGTAGAGCTAAAACC+AGG + chr5_1:3912950-3912969 None:intergenic 40.0%
TATCAGTAACAATTGACCGG+GGG + chr5_1:3913257-3913276 None:intergenic 40.0%
!!! GATTCTTGGTTTTGTGAAGG+CGG + chr5_1:3913318-3913337 None:intergenic 40.0%
CAAAGAGGAAGAAGAAGAAG+AGG - chr5_1:3913362-3913381 Msa0712070:intron 40.0%
ATTATATAGGTACGGTGAGG+TGG + chr5_1:3913610-3913629 None:intergenic 40.0%
TCTTTCTGAACAGGATGACA+AGG - chr5_1:3913640-3913659 Msa0712070:intron 40.0%
TATCAAGCCAATGCTTCCAA+AGG - chr5_1:3913832-3913851 Msa0712070:intron 40.0%
TATAACAAACGAATGGGGTG+AGG + chr5_1:3913862-3913881 None:intergenic 40.0%
!! TTAACAGGGCATTGTAAACG+TGG + chr5_1:3914040-3914059 None:intergenic 40.0%
AACAGTAGCATCATTTAGCG+GGG + chr5_1:3914128-3914147 None:intergenic 40.0%
CACCTTATCAAAAGTTGCGA+AGG - chr5_1:3914199-3914218 Msa0712070:intron 40.0%
! TCCCTTCGCAACTTTTGATA+AGG + chr5_1:3914204-3914223 None:intergenic 40.0%
! TCAAAGAGGCGCAAAATGTA+AGG + chr5_1:3914392-3914411 None:intergenic 40.0%
GTAGGGACTATTCTTCAAAG+AGG + chr5_1:3914804-3914823 None:intergenic 40.0%
AATACTGATGTGGCAGTTAG+TGG - chr5_1:3914504-3914523 Msa0712070:intron 40.0%
ATACTGATGTGGCAGTTAGT+GGG - chr5_1:3914505-3914524 Msa0712070:intron 40.0%
! ATGATGATGTGGCAGTTAGT+GGG + chr5_1:3914706-3914725 None:intergenic 40.0%
! AATGATGATGTGGCAGTTAG+TGG + chr5_1:3914707-3914726 None:intergenic 40.0%
! TCTCTAACGGAATGATGATG+TGG + chr5_1:3914717-3914736 None:intergenic 40.0%
! ATATTTGTGGTTGATGCCAG+TGG - chr5_1:3915346-3915365 Msa0712070:intron 40.0%
AACAGGATGCAGAATGCAAA+AGG - chr5_1:3915382-3915401 Msa0712070:intron 40.0%
TGGCAGAAAGTTATACAAGC+AGG - chr5_1:3915422-3915441 Msa0712070:intron 40.0%
GGCAGAAAGTTATACAAGCA+GGG - chr5_1:3915423-3915442 Msa0712070:intron 40.0%
AAGTTATACAAGCAGGGATC+AGG - chr5_1:3915429-3915448 Msa0712070:intron 40.0%
!! ACGAAACCCAAATAGTGGAT+GGG + chr5_1:3915544-3915563 None:intergenic 40.0%
! TACGAAACCCAAATAGTGGA+TGG + chr5_1:3915545-3915564 None:intergenic 40.0%
AGTAACTGTTCTCCTTAGGT+GGG + chr5_1:3915631-3915650 None:intergenic 40.0%
AAGTAACTGTTCTCCTTAGG+TGG + chr5_1:3915632-3915651 None:intergenic 40.0%
ATTGCAATCGATCTAGAAGG+TGG + chr5_1:3915999-3916018 None:intergenic 40.0%
ACCTTCTAGATCGATTGCAA+TGG - chr5_1:3915998-3916017 Msa0712070:intron 40.0%
AACAAACACAAGTTCTACCG+AGG - chr5_1:3916139-3916158 Msa0712070:intron 40.0%
AACTCAAAGCAGTAGAGAGA+TGG - chr5_1:3916282-3916301 Msa0712070:intron 40.0%
CTGAAAATGTCTAGGCTGTT+AGG - chr5_1:3916438-3916457 Msa0712070:intron 40.0%
!! GTATGGTGGGTAGCTATTTA+TGG - chr5_1:3916721-3916740 Msa0712070:CDS 40.0%
GTTGACAAACCTCTCAAAGT+GGG + chr5_1:3916816-3916835 None:intergenic 40.0%
TGTTGACAAACCTCTCAAAG+TGG + chr5_1:3916817-3916836 None:intergenic 40.0%
TAGTTCAGACTGACAGAAGT+TGG + chr5_1:3917002-3917021 None:intergenic 40.0%
GAAGGATGAAATTCTTGAGG+TGG - chr5_1:3917042-3917061 Msa0712070:intron 40.0%
ATGAAATTCTTGAGGTGGCT+GGG - chr5_1:3917047-3917066 Msa0712070:intron 40.0%
GCACAACTATAAATGACTGG+TGG - chr5_1:3917405-3917424 Msa0712070:CDS 40.0%
AGCAGTCTGGATGAGTTTAT+AGG - chr5_1:3917527-3917546 Msa0712070:CDS 40.0%
CTTCGCGCTCAATCTGAAAA+TGG - chr5_1:3905185-3905204 Msa0712070:three_prime_UTR 45.0%
TTCCCTCTTGCTGCTGTTAT+TGG - chr5_1:3905275-3905294 Msa0712070:three_prime_UTR 45.0%
CAGCATAGTCACACACACTA+TGG + chr5_1:3905551-3905570 None:intergenic 45.0%
CATAGTGTGTGTGACTATGC+TGG - chr5_1:3905549-3905568 Msa0712070:CDS 45.0%
AGAAGAGTAGGGGAAAATGG+TGG - chr5_1:3905659-3905678 Msa0712070:intron 45.0%
TAGCAATCCCTCCAATCCTA+GGG + chr5_1:3905874-3905893 None:intergenic 45.0%
ATAGCAATCCCTCCAATCCT+AGG + chr5_1:3905875-3905894 None:intergenic 45.0%
GAGGGATTGCTATATCAGGA+AGG - chr5_1:3905882-3905901 Msa0712070:intron 45.0%
ATTGCTATATCAGGAAGGCG+AGG - chr5_1:3905887-3905906 Msa0712070:intron 45.0%
! GCTAAAACGATAATGGCACG+TGG - chr5_1:3905914-3905933 Msa0712070:intron 45.0%
CCGCCTATTGAAGTAGTAGA+AGG - chr5_1:3905953-3905972 Msa0712070:intron 45.0%
ACCAGTGACCTTACTCTTCT+GGG + chr5_1:3906006-3906025 None:intergenic 45.0%
AACCAGTGACCTTACTCTTC+TGG + chr5_1:3906007-3906026 None:intergenic 45.0%
! GTGTTCCTCTCTTTTTCTGC+CGG - chr5_1:3906378-3906397 Msa0712070:intron 45.0%
ATTCTCCGGCAGAAAAAGAG+AGG + chr5_1:3906386-3906405 None:intergenic 45.0%
CAGAATCATATTCCACGCGT+TGG + chr5_1:3906568-3906587 None:intergenic 45.0%
CGCGTGGAATATGATTCTGA+TGG - chr5_1:3906569-3906588 Msa0712070:CDS 45.0%
CTCTATGAGCTTCAGCAAGT+AGG + chr5_1:3906850-3906869 None:intergenic 45.0%
! CTACTTGCTGAAGCTCATAG+AGG - chr5_1:3906848-3906867 Msa0712070:intron 45.0%
TCATCGCCACACAAGATCTT+GGG + chr5_1:3907146-3907165 None:intergenic 45.0%
AATACGGAAGAAATCGGAGC+AGG + chr5_1:3907339-3907358 None:intergenic 45.0%
!! ATGAACCAGCTGTTGTTTCC+GGG + chr5_1:3907407-3907426 None:intergenic 45.0%
CAATTCCAACAGCTGCAACA+CGG + chr5_1:3907663-3907682 None:intergenic 45.0%
CTCCTTCCTGAATCTGAATC+AGG - chr5_1:3907839-3907858 Msa0712070:intron 45.0%
!!! GCGAGGACTCTCCAATTTTT+TGG + chr5_1:3907926-3907945 None:intergenic 45.0%
! TCATTAACTTGAACTGGCCC+TGG - chr5_1:3908086-3908105 Msa0712070:intron 45.0%
AGGCAGAATAAGGATGAGCA+GGG + chr5_1:3908146-3908165 None:intergenic 45.0%
TAGGCAGAATAAGGATGAGC+AGG + chr5_1:3908147-3908166 None:intergenic 45.0%
TTCAGGCTGCTCTTCTTTAC+AGG + chr5_1:3908209-3908228 None:intergenic 45.0%
CAACTGCATTGTTTGCCTCT+GGG + chr5_1:3908408-3908427 None:intergenic 45.0%
TCAACTGCATTGTTTGCCTC+TGG + chr5_1:3908409-3908428 None:intergenic 45.0%
!! CTTGGCTAGAGAGTATCTCA+AGG - chr5_1:3908657-3908676 Msa0712070:intron 45.0%
TTTAGGAGGAAGGAAGCCTA+AGG + chr5_1:3909512-3909531 None:intergenic 45.0%
TCATAGATGGAGTTCCGCTT+GGG + chr5_1:3909591-3909610 None:intergenic 45.0%
ATCATAGATGGAGTTCCGCT+TGG + chr5_1:3909592-3909611 None:intergenic 45.0%
! CCTGTGGATTGCAGATTTCA+AGG + chr5_1:3909685-3909704 None:intergenic 45.0%
CCTTGAAATCTGCAATCCAC+AGG - chr5_1:3909682-3909701 Msa0712070:intron 45.0%
ACAATCATCACAGGCAGTGA+CGG - chr5_1:3909716-3909735 Msa0712070:intron 45.0%
!! TCAAAAGCATTGGCAGAGAG+AGG - chr5_1:3909910-3909929 Msa0712070:intron 45.0%
TGAAACTCCAGTACGTTTCG+TGG + chr5_1:3909956-3909975 None:intergenic 45.0%
TCAAGTTTCTCTTAGGGGAG+GGG + chr5_1:3910100-3910119 None:intergenic 45.0%
! TTCAAGCATCCTTTAGGGGA+GGG + chr5_1:3910132-3910151 None:intergenic 45.0%
! ATTCAAGCATCCTTTAGGGG+AGG + chr5_1:3910133-3910152 None:intergenic 45.0%
! TTCAAGCATCTTTGAGGGGA+GGG + chr5_1:3910387-3910406 None:intergenic 45.0%
! ATTCAAGCATCTTTGAGGGG+AGG + chr5_1:3910388-3910407 None:intergenic 45.0%
TCAAGCATCTTATAGGGGAG+GGG - chr5_1:3911005-3911024 Msa0712070:intron 45.0%
! TCAAGTATCTTTGAGGGGAG+GGG - chr5_1:3911095-3911114 Msa0712070:intron 45.0%
! ATTCAAGCTTCTCTTTGGGG+AGG - chr5_1:3911166-3911185 Msa0712070:intron 45.0%
! TTCAAGCTTCTCTTTGGGGA+GGG - chr5_1:3911167-3911186 Msa0712070:intron 45.0%
TCAAGCATATTTGAGGGGAG+GGG - chr5_1:3911271-3911290 Msa0712070:intron 45.0%
AGAGAGAGAGAGAGAGATGA+GGG + chr5_1:3911369-3911388 None:intergenic 45.0%
CAGGCATAGTAACACACAAC+TGG - chr5_1:3911676-3911695 Msa0712070:intron 45.0%
ATATCATAGGAGAACCAGGC+AGG + chr5_1:3911833-3911852 None:intergenic 45.0%
ATTACGCGTGGTCTAACACA+TGG - chr5_1:3911859-3911878 Msa0712070:intron 45.0%
!! TGCTGGCTCTACTGTTCTTA+TGG - chr5_1:3912319-3912338 Msa0712070:intron 45.0%
CGCGTAGTGGTTATGTTCAT+AGG + chr5_1:3912351-3912370 None:intergenic 45.0%
CATGGATGATAGGAAAGGCA+TGG + chr5_1:3912401-3912420 None:intergenic 45.0%
CGACAGCCTGTTAAAAAGGA+AGG - chr5_1:3912546-3912565 Msa0712070:intron 45.0%
TAGAATTGGTCATTCTCCCC+CGG - chr5_1:3913238-3913257 Msa0712070:intron 45.0%
AGAGGAAGAAGAAGAAGAGG+AGG - chr5_1:3913365-3913384 Msa0712070:intron 45.0%
GAAACCCACTGTACTTGACA+TGG + chr5_1:3913487-3913506 None:intergenic 45.0%
GGATGACAAGGATGAAGAGA+AGG - chr5_1:3913652-3913671 Msa0712070:intron 45.0%
!! AGGAGTACCTTTGGAAGCAT+TGG + chr5_1:3913842-3913861 None:intergenic 45.0%
ACAGTAGCATCATTTAGCGG+GGG + chr5_1:3914127-3914146 None:intergenic 45.0%
! ATAAGGTGCAGCAGCTCTAA+GGG + chr5_1:3914187-3914206 None:intergenic 45.0%
TGACATGAGGGCAAAGAGAA+TGG - chr5_1:3914266-3914285 Msa0712070:intron 45.0%
AAGAGAATGGCACGTAAAGC+AGG - chr5_1:3914279-3914298 Msa0712070:intron 45.0%
ACATGTGCCCATCCACTATT+TGG - chr5_1:3915534-3915553 Msa0712070:intron 45.0%
CATGTGCCCATCCACTATTT+GGG - chr5_1:3915535-3915554 Msa0712070:intron 45.0%
GAACTTCAGCTGAATCTCCA+CGG + chr5_1:3915971-3915990 None:intergenic 45.0%
GCCATTGCAATCGATCTAGA+AGG + chr5_1:3916002-3916021 None:intergenic 45.0%
CTAGATCGATTGCAATGGCT+AGG - chr5_1:3916003-3916022 Msa0712070:intron 45.0%
TGGCTAGGAAACGTCTTGAA+AGG - chr5_1:3916018-3916037 Msa0712070:CDS 45.0%
TGCTAAAGATCTGCATACCG+TGG + chr5_1:3916084-3916103 None:intergenic 45.0%
AATGTCTAGGCTGTTAGGGT+TGG - chr5_1:3916443-3916462 Msa0712070:intron 45.0%
GATGAAATTCTTGAGGTGGC+TGG - chr5_1:3917046-3917065 Msa0712070:intron 45.0%
GAGATTGCTAGAGTTGCTCA+AGG - chr5_1:3917145-3917164 Msa0712070:intron 45.0%
! ACAACAGCATCCGAAGCATT+TGG + chr5_1:3917269-3917288 None:intergenic 45.0%
TGTTGTCTCGATGGCAACAA+GGG - chr5_1:3917283-3917302 Msa0712070:intron 45.0%
!!! ACATATTTTAATTTTATTTT+GGG + chr5_1:3910746-3910765 None:intergenic 5.0%
!!! ACAAATTTATATTTTTTAAA+TGG - chr5_1:3910885-3910904 Msa0712070:intron 5.0%
!! AATTAATTATAATAAGAATA+AGG - chr5_1:3914348-3914367 Msa0712070:intron 5.0%
!! ATTAATTATAATAAGAATAA+GGG - chr5_1:3914349-3914368 Msa0712070:intron 5.0%
TCAGATTGAGCGCGAAGCTT+CGG + chr5_1:3905182-3905201 None:intergenic 50.0%
TCTCCTCCTCCTCAGAAGTA+AGG + chr5_1:3905220-3905239 None:intergenic 50.0%
GGCCAATAACAGCAGCAAGA+GGG + chr5_1:3905280-3905299 None:intergenic 50.0%
TGGCCAATAACAGCAGCAAG+AGG + chr5_1:3905281-3905300 None:intergenic 50.0%
CTACTGACCCTAGGATTGGA+GGG - chr5_1:3905864-3905883 Msa0712070:intron 50.0%
CGAGGGATCTGAATTGGCTA+TGG + chr5_1:3905981-3906000 None:intergenic 50.0%
! GATATGAGCTCAAGGGCGTA+AGG - chr5_1:3906142-3906161 Msa0712070:CDS 50.0%
GATTCCTCTTGGAGTCACAG+AGG - chr5_1:3906757-3906776 Msa0712070:intron 50.0%
GTCACAGAGGACAGACTCAT+TGG - chr5_1:3906770-3906789 Msa0712070:intron 50.0%
GTTGAGGAGTCTGTGAAGAC+TGG - chr5_1:3906803-3906822 Msa0712070:intron 50.0%
TGCTACCTATAACCCTGACG+AGG - chr5_1:3907006-3907025 Msa0712070:intron 50.0%
GCTACCTATAACCCTGACGA+GGG - chr5_1:3907007-3907026 Msa0712070:intron 50.0%
AGAACCCTCGTCAGGGTTAT+AGG + chr5_1:3907014-3907033 None:intergenic 50.0%
TGGGCCTATCTTGTAAAGGG+AGG + chr5_1:3907127-3907146 None:intergenic 50.0%
GATAGGCCCAAGATCTTGTG+TGG - chr5_1:3907137-3907156 Msa0712070:intron 50.0%
CTCATCGCCACACAAGATCT+TGG + chr5_1:3907147-3907166 None:intergenic 50.0%
CAAGATCTTGTGTGGCGATG+AGG - chr5_1:3907145-3907164 Msa0712070:intron 50.0%
CAACCCTTATCCCACTGAGT+GGG - chr5_1:3907201-3907220 Msa0712070:CDS 50.0%
AACCCTTATCCCACTGAGTG+GGG - chr5_1:3907202-3907221 Msa0712070:CDS 50.0%
AACCCCACTCAGTGGGATAA+GGG + chr5_1:3907207-3907226 None:intergenic 50.0%
GGAGCAGGAAATGAAGCACA+GGG + chr5_1:3907324-3907343 None:intergenic 50.0%
TGGAAGATCTGCACTGCAGA+GGG + chr5_1:3907626-3907645 None:intergenic 50.0%
TTGGAAGATCTGCACTGCAG+AGG + chr5_1:3907627-3907646 None:intergenic 50.0%
GAAAACCGTGTTGCAGCTGT+TGG - chr5_1:3907655-3907674 Msa0712070:intron 50.0%
GCAAAGACACAGGTATGCCT+AGG - chr5_1:3907745-3907764 Msa0712070:intron 50.0%
AAGACACAGGTATGCCTAGG+AGG - chr5_1:3907748-3907767 Msa0712070:intron 50.0%
AGACACAGGTATGCCTAGGA+GGG - chr5_1:3907749-3907768 Msa0712070:intron 50.0%
! GAGCAGGGGGAACAGAATTT+TGG + chr5_1:3908131-3908150 None:intergenic 50.0%
GCAGAATAAGGATGAGCAGG+GGG + chr5_1:3908144-3908163 None:intergenic 50.0%
GGCAGAATAAGGATGAGCAG+GGG + chr5_1:3908145-3908164 None:intergenic 50.0%
!!! GTTTTCAGGTCAAGTCCCAG+AGG - chr5_1:3908390-3908409 Msa0712070:CDS 50.0%
CTCGTAAAGCCTCAAGAACC+AGG + chr5_1:3908714-3908733 None:intergenic 50.0%
! CTGGTTCTTGAGGCTTTACG+AGG - chr5_1:3908712-3908731 Msa0712070:intron 50.0%
GTTCTTGAGGCTTTACGAGG+TGG - chr5_1:3908715-3908734 Msa0712070:intron 50.0%
GTCAAAGCCACGAAACGTAC+TGG - chr5_1:3909946-3909965 Msa0712070:intron 50.0%
ATTACACTCCCCTCCCCTAA+AGG - chr5_1:3910120-3910139 Msa0712070:intron 50.0%
! TCAAGCATCCTTTAGGGGAG+GGG + chr5_1:3910131-3910150 None:intergenic 50.0%
! TCAAGCATCTTTGAGGGGAG+GGG + chr5_1:3910386-3910405 None:intergenic 50.0%
! CAAGTATCTTTGAGGGGAGG+GGG - chr5_1:3911096-3911115 Msa0712070:intron 50.0%
! AAGTATCTTTGAGGGGAGGG+GGG - chr5_1:3911097-3911116 Msa0712070:intron 50.0%
! TCAAGCTTCTCTTTGGGGAG+GGG - chr5_1:3911168-3911187 Msa0712070:intron 50.0%
GAGAGAGAGAGAGAGAGATG+AGG + chr5_1:3911370-3911389 None:intergenic 50.0%
AGATACCACCTTAACCTGCC+TGG - chr5_1:3911816-3911835 Msa0712070:intron 50.0%
TAGGAGAACCAGGCAGGTTA+AGG + chr5_1:3911827-3911846 None:intergenic 50.0%
ATTATCAGACCACGCGGCAA+AGG + chr5_1:3912156-3912175 None:intergenic 50.0%
TGCTAAGTGCTTAGCTGCTC+TGG - chr5_1:3912232-3912251 Msa0712070:intron 50.0%
TAAGTGCTTAGCTGCTCTGG+AGG - chr5_1:3912235-3912254 Msa0712070:intron 50.0%
! AAGTGCTTAGCTGCTCTGGA+GGG - chr5_1:3912236-3912255 Msa0712070:intron 50.0%
GGGACGTGAAAAGGTTTACG+CGG - chr5_1:3912256-3912275 Msa0712070:intron 50.0%
GTCCCGACAGCCTGTTAAAA+AGG - chr5_1:3912542-3912561 Msa0712070:intron 50.0%
GCACGCAGAGAGATACATAG+AGG + chr5_1:3912966-3912985 None:intergenic 50.0%
!! GGCTGATTTTGTTGCTCAGG+TGG + chr5_1:3913282-3913301 None:intergenic 50.0%
!!! TCTTGGTTTTGTGAAGGCGG+TGG + chr5_1:3913315-3913334 None:intergenic 50.0%
TCTTTGCCCAACAAGCACAG+AGG - chr5_1:3913750-3913769 Msa0712070:intron 50.0%
!! AATGGGGTGAGGAGTACCTT+TGG + chr5_1:3913851-3913870 None:intergenic 50.0%
! GAAGTTTGGTGAGCGCCAAT+CGG - chr5_1:3913948-3913967 Msa0712070:CDS 50.0%
! AAGTTTGGTGAGCGCCAATC+GGG - chr5_1:3913949-3913968 Msa0712070:CDS 50.0%
GATAAGGTGCAGCAGCTCTA+AGG + chr5_1:3914188-3914207 None:intergenic 50.0%
GTTCAATGCCATGCTTCCAC+TGG + chr5_1:3915365-3915384 None:intergenic 50.0%
! GTGGAAGCATGGCATTGAAC+AGG - chr5_1:3915365-3915384 Msa0712070:intron 50.0%
AGGTGCAGCACTTAAGCTTC+TGG - chr5_1:3915402-3915421 Msa0712070:intron 50.0%
ACGGCATATGTACCCACCTA+AGG - chr5_1:3915616-3915635 Msa0712070:CDS 50.0%
TTCCTTGGGTGTGCAGAAGT+TGG - chr5_1:3915699-3915718 Msa0712070:CDS 50.0%
TACCAACTTCTGCACACCCA+AGG + chr5_1:3915704-3915723 None:intergenic 50.0%
TCAGCTGAATCTCCACGGAA+AGG + chr5_1:3915966-3915985 None:intergenic 50.0%
GCATACCGTGGTAAGACCAT+GGG + chr5_1:3916072-3916091 None:intergenic 50.0%
TGCATACCGTGGTAAGACCA+TGG + chr5_1:3916073-3916092 None:intergenic 50.0%
GCAGAGAAAAGTGGCGATGT+TGG - chr5_1:3916473-3916492 Msa0712070:intron 50.0%
!! AGGTTTAGGGGCATCAGTAG+CGG + chr5_1:3916576-3916595 None:intergenic 50.0%
TGTCTCAACAGGTTTCGCGA+AGG - chr5_1:3917123-3917142 Msa0712070:intron 50.0%
TTCGGATGCTGTTGTCTCGA+TGG - chr5_1:3917274-3917293 Msa0712070:intron 50.0%
CTGTTGTCTCGATGGCAACA+AGG - chr5_1:3917282-3917301 Msa0712070:intron 50.0%
! AGCTTCGGAACGCTGCGTTT+TGG + chr5_1:3905167-3905186 None:intergenic 55.0%
TGCTGCGGTCCTTACTTCTG+AGG - chr5_1:3905208-3905227 Msa0712070:three_prime_UTR 55.0%
! TGCGGTCCTTACTTCTGAGG+AGG - chr5_1:3905211-3905230 Msa0712070:three_prime_UTR 55.0%
! GGTCCTTACTTCTGAGGAGG+AGG - chr5_1:3905214-3905233 Msa0712070:three_prime_UTR 55.0%
TACTTGGGGCTACTGACCCT+AGG - chr5_1:3905855-3905874 Msa0712070:intron 55.0%
GCTACTGACCCTAGGATTGG+AGG - chr5_1:3905863-3905882 Msa0712070:intron 55.0%
TGGGCACGAGGGATCTGAAT+TGG + chr5_1:3905987-3906006 None:intergenic 55.0%
CCTTACTCTTCTGGGCACGA+GGG + chr5_1:3905998-3906017 None:intergenic 55.0%
ACCTTACTCTTCTGGGCACG+AGG + chr5_1:3905999-3906018 None:intergenic 55.0%
GCCCAGAAGAGTAAGGTCAC+TGG - chr5_1:3906002-3906021 Msa0712070:intron 55.0%
AGATGATCTTGCCCAACGCG+TGG - chr5_1:3906553-3906572 Msa0712070:CDS 55.0%
CTGTCCTCTGTGACTCCAAG+AGG + chr5_1:3906764-3906783 None:intergenic 55.0%
GGCACGACTGTTTACCAACC+AGG - chr5_1:3906824-3906843 Msa0712070:intron 55.0%
CTTCAGCAAGTAGGCCTGGT+TGG + chr5_1:3906841-3906860 None:intergenic 55.0%
TGAGCTTCAGCAAGTAGGCC+TGG + chr5_1:3906845-3906864 None:intergenic 55.0%
CACGAACAGAACCCTCGTCA+GGG + chr5_1:3907021-3907040 None:intergenic 55.0%
TCACGAACAGAACCCTCGTC+AGG + chr5_1:3907022-3907041 None:intergenic 55.0%
CCACTCAGTGGGATAAGGGT+TGG + chr5_1:3907203-3907222 None:intergenic 55.0%
CCAACCCTTATCCCACTGAG+TGG - chr5_1:3907200-3907219 Msa0712070:CDS 55.0%
CAACCCCACTCAGTGGGATA+AGG + chr5_1:3907208-3907227 None:intergenic 55.0%
CTTATCCCACTGAGTGGGGT+TGG - chr5_1:3907206-3907225 Msa0712070:CDS 55.0%
AGCTTCCAACCCCACTCAGT+GGG + chr5_1:3907214-3907233 None:intergenic 55.0%
TAGCTTCCAACCCCACTCAG+TGG + chr5_1:3907215-3907234 None:intergenic 55.0%
CGGAGCAGGAAATGAAGCAC+AGG + chr5_1:3907325-3907344 None:intergenic 55.0%
!! ACCAGCTGTTGTTTCCGGGA+CGG + chr5_1:3907403-3907422 None:intergenic 55.0%
GGAAGATCTGCACTGCAGAG+GGG + chr5_1:3907625-3907644 None:intergenic 55.0%
! AAAGTTTGCGAGGGAGTGCG+AGG + chr5_1:3907943-3907962 None:intergenic 55.0%
TCTCGTCCCGCTCACTTGAT+TGG + chr5_1:3909046-3909065 None:intergenic 55.0%
AGGAGGAAGGAAGCCTAAGG+TGG + chr5_1:3909509-3909528 None:intergenic 55.0%
GATGGAGTTCCGCTTGGGAA+CGG + chr5_1:3909586-3909605 None:intergenic 55.0%
! GGCAGAGAGAGGACGACTTT+TGG - chr5_1:3909921-3909940 Msa0712070:intron 55.0%
! AGTATCTTTGAGGGGAGGGG+GGG - chr5_1:3911098-3911117 Msa0712070:intron 55.0%
GAGAACCAGGCAGGTTAAGG+TGG + chr5_1:3911824-3911843 None:intergenic 55.0%
AGCTGATATCCTTTGCCGCG+TGG - chr5_1:3912144-3912163 Msa0712070:intron 55.0%
!! TGCTCTGGAGGGACGTGAAA+AGG - chr5_1:3912247-3912266 Msa0712070:intron 55.0%
AGCTCGAAAACAGAAGGCCG+AGG + chr5_1:3912686-3912705 None:intergenic 55.0%
!! GGCGGCTGATTTTGTTGCTC+AGG + chr5_1:3913285-3913304 None:intergenic 55.0%
! TTTTGTGAAGGCGGTGGAGG+CGG + chr5_1:3913309-3913328 None:intergenic 55.0%
!!! TGGTTTTGTGAAGGCGGTGG+AGG + chr5_1:3913312-3913331 None:intergenic 55.0%
CTTTGATGCTGAAGGGGGCT+TGG - chr5_1:3913709-3913728 Msa0712070:intron 55.0%
! GGCACGTAAAGCAGGAGCAT+TGG - chr5_1:3914287-3914306 Msa0712070:intron 55.0%
! GGTTGATGCCAGTGGAAGCA+TGG - chr5_1:3915354-3915373 Msa0712070:intron 55.0%
CGTCTTGAAAGGCTTCCGTG+TGG - chr5_1:3916029-3916048 Msa0712070:CDS 55.0%
CTTGAAAGGCTTCCGTGTGG+TGG - chr5_1:3916032-3916051 Msa0712070:CDS 55.0%
! AAAGGCTTCCGTGTGGTGGA+GGG - chr5_1:3916036-3916055 Msa0712070:CDS 55.0%
GTGGTAAGACCATGGGCAAG+GGG + chr5_1:3916065-3916084 None:intergenic 55.0%
CGTGGTAAGACCATGGGCAA+GGG + chr5_1:3916066-3916085 None:intergenic 55.0%
! CCTTGCCCATGGTCTTACCA+CGG - chr5_1:3916064-3916083 Msa0712070:CDS 55.0%
!! GGATGGGAAGGTGTCAAGCT+TGG + chr5_1:3917355-3917374 None:intergenic 55.0%
GGGGCTACTGACCCTAGGAT+TGG - chr5_1:3905860-3905879 Msa0712070:intron 60.0%
CCCTCGTGCCCAGAAGAGTA+AGG - chr5_1:3905995-3906014 Msa0712070:intron 60.0%
!! TCAGCTTTAGGCACCCCTGC+AGG - chr5_1:3906972-3906991 Msa0712070:intron 60.0%
CAATCAGAAGGGGCCTGCAG+GGG + chr5_1:3906988-3907007 None:intergenic 60.0%
GCAATCAGAAGGGGCCTGCA+GGG + chr5_1:3906989-3907008 None:intergenic 60.0%
AGCAATCAGAAGGGGCCTGC+AGG + chr5_1:3906990-3907009 None:intergenic 60.0%
!! CAGCTGTTGTTTCCGGGACG+GGG + chr5_1:3907401-3907420 None:intergenic 60.0%
!! CCAGCTGTTGTTTCCGGGAC+GGG + chr5_1:3907402-3907421 None:intergenic 60.0%
GGCTTTACGAGGTGGTGTCC+AGG - chr5_1:3908723-3908742 Msa0712070:intron 60.0%
CTCCTCACGCGAACCACCTT+AGG - chr5_1:3909493-3909512 Msa0712070:intron 60.0%
AGCCTAAGGTGGTTCGCGTG+AGG + chr5_1:3909498-3909517 None:intergenic 60.0%
CTGTTGTGGCCGTTCCCAAG+CGG - chr5_1:3909574-3909593 Msa0712070:intron 60.0%
! GTATCTTTGAGGGGAGGGGG+GGG - chr5_1:3911099-3911118 Msa0712070:intron 60.0%
TGATGCTGAAGGGGGCTTGG+TGG - chr5_1:3913712-3913731 Msa0712070:intron 60.0%
ACGGCGCCTCTGTGCTTGTT+GGG + chr5_1:3913759-3913778 None:intergenic 60.0%
!! AACAAGCACAGAGGCGCCGT+GGG - chr5_1:3913759-3913778 Msa0712070:intron 60.0%
TTGCCCTTCCAGCCTTCCCA+CGG + chr5_1:3913778-3913797 None:intergenic 60.0%
GAAAGGCTTCCGTGTGGTGG+AGG - chr5_1:3916035-3916054 Msa0712070:CDS 60.0%
CCGTGGTAAGACCATGGGCA+AGG + chr5_1:3916067-3916086 None:intergenic 60.0%
TCAGTAGCGGCAGCAGCTTC+AGG + chr5_1:3916563-3916582 None:intergenic 60.0%
GTGAGGAGGGTTGAGCAGTC+TGG - chr5_1:3917514-3917533 Msa0712070:CDS 60.0%
CTCTCTCTCTCTCCCCGTCC+CGG - chr5_1:3907386-3907405 Msa0712070:intron 65.0%
CCCGTCCCGGAAACAACAGC+TGG - chr5_1:3907399-3907418 Msa0712070:intron 65.0%
CGCTTGGGAACGGCCACAAC+AGG + chr5_1:3909576-3909595 None:intergenic 65.0%
CACGGCGCCTCTGTGCTTGT+TGG + chr5_1:3913760-3913779 None:intergenic 65.0%
!! CAACAAGCACAGAGGCGCCG+TGG - chr5_1:3913758-3913777 Msa0712070:intron 65.0%
AGGGGTGACCCTCCACCACA+CGG + chr5_1:3916047-3916066 None:intergenic 65.0%
TGTGAAGGCGGTGGAGGCGG+AGG + chr5_1:3913306-3913325 None:intergenic 70.0%
!! AGCACAGAGGCGCCGTGGGA+AGG - chr5_1:3913763-3913782 Msa0712070:intron 70.0%
GCGCCGTGGGAAGGCTGGAA+GGG - chr5_1:3913772-3913791 Msa0712070:intron 70.0%
GGAGGGTCACCCCTTGCCCA+TGG - chr5_1:3916053-3916072 Msa0712070:CDS 70.0%
GAAGGCGGTGGAGGCGGAGG+CGG + chr5_1:3913303-3913322 None:intergenic 75.0%
!! CAGAGGCGCCGTGGGAAGGC+TGG - chr5_1:3913767-3913786 Msa0712070:intron 75.0%
GGCGCCGTGGGAAGGCTGGA+AGG - chr5_1:3913771-3913790 Msa0712070:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 3904982 3917653 3904982 ID=Msa0712070;Name=Msa0712070
chr5_1 mRNA 3904982 3917653 3904982 ID=Msa0712070-mRNA-1;Parent=Msa0712070;Name=Msa0712070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=50|0.92|0.93|1|1|1|15|319|740
chr5_1 exon 3904982 3905386 3904982 ID=Msa0712070-mRNA-1:exon:1523;Parent=Msa0712070-mRNA-1
chr5_1 exon 3905469 3905589 3905469 ID=Msa0712070-mRNA-1:exon:1522;Parent=Msa0712070-mRNA-1
chr5_1 exon 3906022 3906183 3906022 ID=Msa0712070-mRNA-1:exon:1521;Parent=Msa0712070-mRNA-1
chr5_1 exon 3906550 3906684 3906550 ID=Msa0712070-mRNA-1:exon:1520;Parent=Msa0712070-mRNA-1
chr5_1 exon 3907185 3907292 3907185 ID=Msa0712070-mRNA-1:exon:1519;Parent=Msa0712070-mRNA-1
chr5_1 exon 3908387 3908482 3908387 ID=Msa0712070-mRNA-1:exon:1518;Parent=Msa0712070-mRNA-1
chr5_1 exon 3908782 3908982 3908782 ID=Msa0712070-mRNA-1:exon:1517;Parent=Msa0712070-mRNA-1
chr5_1 exon 3909249 3909398 3909249 ID=Msa0712070-mRNA-1:exon:1516;Parent=Msa0712070-mRNA-1
chr5_1 exon 3910340 3910435 3910340 ID=Msa0712070-mRNA-1:exon:1515;Parent=Msa0712070-mRNA-1
chr5_1 exon 3913891 3913983 3913891 ID=Msa0712070-mRNA-1:exon:1514;Parent=Msa0712070-mRNA-1
chr5_1 exon 3914879 3915002 3914879 ID=Msa0712070-mRNA-1:exon:1513;Parent=Msa0712070-mRNA-1
chr5_1 exon 3915561 3915877 3915561 ID=Msa0712070-mRNA-1:exon:1512;Parent=Msa0712070-mRNA-1
chr5_1 exon 3916004 3916088 3916004 ID=Msa0712070-mRNA-1:exon:1511;Parent=Msa0712070-mRNA-1
chr5_1 exon 3916624 3916802 3916624 ID=Msa0712070-mRNA-1:exon:1510;Parent=Msa0712070-mRNA-1
chr5_1 exon 3917334 3917653 3917334 ID=Msa0712070-mRNA-1:exon:1509;Parent=Msa0712070-mRNA-1
chr5_1 five_prime_UTR 3917604 3917653 3917604 ID=Msa0712070-mRNA-1:five_prime_utr;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3917334 3917603 3917334 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3916624 3916802 3916624 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3916004 3916088 3916004 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3915561 3915877 3915561 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3914879 3915002 3914879 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3913891 3913983 3913891 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3910340 3910435 3910340 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3909249 3909398 3909249 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3908782 3908982 3908782 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3908387 3908482 3908387 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3907185 3907292 3907185 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3906550 3906684 3906550 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3906022 3906183 3906022 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3905469 3905589 3905469 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 CDS 3905301 3905386 3905301 ID=Msa0712070-mRNA-1:cds;Parent=Msa0712070-mRNA-1
chr5_1 three_prime_UTR 3904982 3905300 3904982 ID=Msa0712070-mRNA-1:three_prime_utr;Parent=Msa0712070-mRNA-1
Gene Sequence

>Msa0712070

ATGCAAACAACATACGGAATGGGTTTCAGTTTAACACAAACCCCTCACACTAATCTTCAACTCCAATTCCACTCTCTATTTTCATCAAAACCATTTCTCTCTTTGCAATTTCATCATACATGTCTAGTTCGACCAAAACGCAGCGTTCCGAAGCTTCGCGCTCAATCTGAAAATGGTGCTGCGGTCCTTACTTCTGAGGAGGAGGAGAACAAGCTCGATGCTAGTACTTATGGAAGACAGTACTTCCCTCTTGCTGCTGTTATTGGCCAAGATGCTATTAAAACTGCTCTTTTACTTGGGGCTACTGACCCTAGGATTGGAGGGATTGCTATATCAGGAAGGCGAGGAACTGCTAAAACGATAATGGCACGTGGAATGCATGCAATACTTCCGCCTATTGAAGTAGTAGAAGGTTCCATAGCCAATTCAGATCCCTCGTGCCCAGAAGAGTGGGAAGATGATCTTGCCCAACGCGTGGAATATGATTCTGATGGAAATATTAAAACTCGTATTGTCAAATCTCCCTTTGTTCAGATTCCTCTTGGAGTCACAGAGGACAGACTCATTGGATCAGTTGATGTTGAGGAGTCTGTGAAGACTGGCACGACTGTTTACCAACCAGGCCTACTTGCTGAAGCTCATAGAGGTGTTCTATATGTTGATGAAATTAATCTTTTGGATGAGGGTATCAGTAATTTGCTCCTTAATGTATTGACTGAAGGAGTAAATATTGTTGAAAGAGAGGGAATCAGCTTTAGGCACCCCTGCAGGCCCCTTCTGATTGCTACCTATAACCCTGACGAGGGTTCTGTTCGTGAACATCTGCTAGATCGCATTGCAATTAACTTGAGTGCAGATCTTCCAATGAGTTTTGAAAACCGTGTTGCAGCTGTTGGAATTGCGACAGAATTTCAGGATAACTGTGGCGAAGTATTTAAAATGGTTGATGAGGATACAGACAATGCAAAGACACAGATCATCTTGGCTAGAGAGTATCTCAAGGATGTTACTATTGGCAAAGAACAATTAAAATACCTGGTTCTTGAGGCTTTACGAGGTGGTGTCCAGGGACACAGAGCTGAGCTGTATGCTGCTCGTGTTGCTAAGTGCTTAGCTGCTCTGGAGGGACGTGAAAAGGTTTACGCGGATGACCTTAAAAAAGCCGTAGAATTGGTCATTCTCCCCCGGTCAATTGTTACTGATAATCCACCTGAGCAACAAAATCAGCCGCCTCCGCCTCCACCGCCTTCACAAAACCAAGAATCCAATGAAGAACAGAATGAAGAAGACAAAGAGGAAGAAGAAGAAGAGGAGGATGACAAGGATGAAGAGAAGGAAGAACAGCAAGAACAATTACCTGAAGAATTTATCTTTGATGCTGAAGGGGGCTTGGTGGATGAAAAACTTCTCTTCTTTGCCCAACAAGCACAGAGGCGCCGTGGGAAGGCTGGAAGGGCAAAAAATGTTATATTTTCAGAGGACAGAGGCCGATATATCAAGCCAATGCTTCCAAAGGGTCCTGTAAAGAGATTAGCAGTTGATGCAACCCTTAGAGCTGCTGCACCTTATCAAAAGTTGCGAAGGGAAAAAGACACTGAAAACCGTAGAAAAGTGATATTTGTGGTTGATGCCAGTGGAAGCATGGCATTGAACAGGATGCAGAATGCAAAAGGTGCAGCACTTAAGCTTCTGGCAGAAAGTTATACAAGCAGGGATCAGGTATCAATAATTCCTTTCCGTGGAGATTCAGCTGAAGTTCTTCTGCCACCTTCTAGATCGATTGCAATGGCTAGGAAACGTCTTGAAAGGCTTCCGTGTGGTGGAGGGTCACCCCTTGCCCATGGTCTTACCACGGCTGTTAGGGTTGGATTAAATGCAGAGAAAAGTGGCGATGTTGGACGTATAATGATTGTTGCAATCACTGATGGCCGAGCCAACATATCTTTAAAAAGGTCAACTGATCCTGAAGCTGCTGCCGCTACTGATGCCCCTAAACCTACATCACAAGAATTGAAGGATGAAATTCTTGAGGTGGCTGGGAAGATATATAAATCAGGAATGTCTCTCCTTGTCATTGACACTGAAAACAAGTTTGTCTCAACAGGTTTCGCGAAGGAGATTGCTAGAGTTGCTCAAGGGAAGTATTATTATTTGCCAAATGCTTCGGATGCTGTTGTCTCGATGGCAACAAGGGAAGCATTATCAGCTTTGAAGAGTTCATAA
Protein sequence

>Msa0712070

MQTTYGMGFSLTQTPHTNLQLQFHSLFSSKPFLSLQFHHTCLVRPKRSVPKLRAQSENGAAVLTSEEEENKLDASTYGRQYFPLAAVIGQDAIKTALLLGATDPRIGGIAISGRRGTAKTIMARGMHAILPPIEVVEGSIANSDPSCPEEWEDDLAQRVEYDSDGNIKTRIVKSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVYQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFRHPCRPLLIATYNPDEGSVREHLLDRIAINLSADLPMSFENRVAAVGIATEFQDNCGEVFKMVDEDTDNAKTQIILAREYLKDVTIGKEQLKYLVLEALRGGVQGHRAELYAARVAKCLAALEGREKVYADDLKKAVELVILPRSIVTDNPPEQQNQPPPPPPPSQNQESNEEQNEEDKEEEEEEEDDKDEEKEEQQEQLPEEFIFDAEGGLVDEKLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLRREKDTENRRKVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSTDPEAAAATDAPKPTSQELKDEILEVAGKIYKSGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVVSMATREALSALKSS*