AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083930 MtrunA17_Chr7g0274271 95.280 339 10 3 1 333 43 381 0.0 606
Msa1083930 MtrunA17_Chr2g0312531 26.335 281 172 11 77 335 56 323 1.05e-18 86.7
Msa1083930 MtrunA17_Chr1g0207371 94.286 35 2 0 299 333 1 35 1.32e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083930 AT3G04650.1 67.203 311 94 4 25 333 43 347 1.70e-143 415
Msa1083930 AT1G55980.2 27.574 272 163 11 77 326 23 282 2.01e-23 99.4
Msa1083930 AT1G56000.1 27.574 272 163 11 77 326 23 282 6.31e-23 98.6
Msa1083930 AT1G55980.1 27.574 272 163 11 77 326 163 422 7.65e-23 99.4
Msa1083930 AT1G55980.3 24.359 234 146 9 113 326 5 227 6.82e-13 68.6
Msa1083930 AT1G56000.2 24.359 234 146 9 113 326 5 227 1.45e-12 68.2

Find 102 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTGTTTAGCAATTAA+TGG 0.158218 7_2:-84239561 None:intergenic
CAGCAATTTCTTGGTATTAT+TGG 0.162646 7_2:-84239839 None:intergenic
GTTCCTCAAACGCTGCTAAA+AGG 0.214975 7_2:-84239738 None:intergenic
AGTAAATTGGAGCCATTTAA+TGG 0.238781 7_2:+84239287 Msa1083930:CDS
TTTCTAAGTACTGCTGCTTA+TGG 0.240911 7_2:+84239895 Msa1083930:CDS
AAGGCTTATTGATGATTCTT+TGG 0.269333 7_2:+84238245 Msa1083930:CDS
ATGTGGCACTTGAGTGAAAA+TGG 0.291266 7_2:+84239311 Msa1083930:CDS
CTGGGAAGCCAGCAATTTCT+TGG 0.306680 7_2:-84239848 None:intergenic
TGTTAATGTTTGGTTGGATA+AGG 0.312436 7_2:+84238323 Msa1083930:CDS
AAGTGCCACATCCCATTAAA+TGG 0.331387 7_2:-84239299 None:intergenic
AGAGGATCTTCTGCGGGGTT+TGG 0.337197 7_2:-84238016 None:intergenic
GGCTGGAATTGAGTTCAATA+TGG 0.346393 7_2:+84239713 Msa1083930:CDS
CACCGTGGCGACGGCGGTTG+AGG 0.367448 7_2:-84237971 None:intergenic
GACACTGGTATTCATGGTCT+TGG 0.368585 7_2:+84238207 Msa1083930:CDS
CTTCTGCGGGGTTTGGAGGG+TGG 0.372413 7_2:-84238009 None:intergenic
GGATCTTCTGCGGGGTTTGG+AGG 0.374362 7_2:-84238013 None:intergenic
TCATGGTCTTGGAGGAAGAT+TGG 0.376531 7_2:+84238218 Msa1083930:CDS
GTTAATGTTTGGTTGGATAA+GGG 0.379633 7_2:+84238324 Msa1083930:CDS
TGTTTGGTTGGATAAGGGTT+TGG 0.386223 7_2:+84238329 Msa1083930:CDS
GATGGACGGTTGATTAAGTA+TGG 0.387494 7_2:-84237946 None:intergenic
ACCGTGCTGGATCAGTAAAT+TGG 0.400349 7_2:+84239274 Msa1083930:CDS
AGTGACTTGCTCTTGTTTGA+AGG 0.409804 7_2:-84238073 None:intergenic
CATAAACCATAAAACATGTT+TGG 0.419107 7_2:+84237883 Msa1083930:exon
GTAAATTGGAGCCATTTAAT+GGG 0.420332 7_2:+84239288 Msa1083930:CDS
AACCGCTTGCTTATGACATC+GGG 0.420523 7_2:+84239534 Msa1083930:CDS
CATGGTCTTGGAGGAAGATT+GGG 0.422905 7_2:+84238219 Msa1083930:CDS
CAACCTAACCTCAGAGAGTA+AGG 0.424200 7_2:-84238466 None:intergenic
TTGCTGAAATTGTTAATGTT+TGG 0.427289 7_2:+84238313 Msa1083930:CDS
AACAGTGAGGACCGTCACTC+TGG 0.431628 7_2:-84239867 None:intergenic
CTGCGGGGTTTGGAGGGTGG+TGG 0.443567 7_2:-84238006 None:intergenic
CCACGAGTAGCTATATATCT+TGG 0.446647 7_2:-84238423 None:intergenic
TTTACGAGAAGTTCCGTAAG+AGG 0.449507 7_2:-84238034 None:intergenic
TTCCTCAAACGCTGCTAAAA+GGG 0.463192 7_2:-84239737 None:intergenic
GAACCACTTGTCGGCATCAT+CGG 0.467385 7_2:+84238117 Msa1083930:CDS
CAATAATACCAAGAAATTGC+TGG 0.469630 7_2:+84239840 Msa1083930:CDS
CTCACAAAAGCTCCTTCAAA+AGG 0.471085 7_2:-84239790 None:intergenic
GCGACGGCGGTTGAGGAAGA+TGG 0.473878 7_2:-84237964 None:intergenic
ATAAGGGTTTGGTTCGAGAA+TGG 0.479869 7_2:+84238340 Msa1083930:CDS
TCCGTAAGAGGATCTTCTGC+GGG 0.484423 7_2:-84238022 None:intergenic
ATCATCGGCGGTGGTATCTC+CGG 0.491348 7_2:+84238132 Msa1083930:CDS
ACTTCTGTATTCTCTAGAAA+AGG 0.493880 7_2:-84239766 None:intergenic
ATTAATTGCTAAACAAATGA+AGG 0.496646 7_2:+84239563 Msa1083930:CDS
GGGTTTGGTTCGAGAATGGA+AGG 0.500510 7_2:+84238344 Msa1083930:CDS
ACAAGTGGTTCGTCGGAGAA+AGG 0.501845 7_2:-84238105 None:intergenic
TTCCTCAACCGCCGTCGCCA+CGG 0.504679 7_2:+84237969 Msa1083930:CDS
GATCTTCTGCGGGGTTTGGA+GGG 0.512856 7_2:-84238012 None:intergenic
TGCTGATTCCTTACTCTCTG+AGG 0.515444 7_2:+84238458 Msa1083930:CDS
TAACCGCTTGCTTATGACAT+CGG 0.524146 7_2:+84239533 Msa1083930:CDS
TTCTCCGACGAACCACTTGT+CGG 0.524522 7_2:+84238108 Msa1083930:CDS
TGGAGCCATTTAATGGGATG+TGG 0.526525 7_2:+84239294 Msa1083930:CDS
TTGGAGGAAGATTGGGAACA+AGG 0.527169 7_2:+84238226 Msa1083930:CDS
ACTGGTATTCATGGTCTTGG+AGG 0.535741 7_2:+84238210 Msa1083930:CDS
ATAAGCAGCAGTACTTAGAA+AGG 0.536774 7_2:-84239893 None:intergenic
CGAGTAGCTATATATCTTGG+AGG 0.540308 7_2:-84238420 None:intergenic
GCTGGAATTGAGTTCAATAT+GGG 0.547006 7_2:+84239714 Msa1083930:CDS
GATTAAGTATGGAGCTGTGG+AGG 0.547693 7_2:-84237935 None:intergenic
AGAGTGACGGTCCTCACTGT+TGG 0.547828 7_2:+84239869 Msa1083930:CDS
TGAAATTGTTAATGTTTGGT+TGG 0.553129 7_2:+84238317 Msa1083930:CDS
GAAGATAGCGCAAATGAGAC+CGG 0.553399 7_2:-84238151 None:intergenic
ATGAATACCAGTGTCGAAAA+CGG 0.555330 7_2:-84238199 None:intergenic
GCTATATATCTTGGAGGAGA+GGG 0.561504 7_2:-84238414 None:intergenic
CCGCCGATGATGCCGACAAG+TGG 0.575746 7_2:-84238120 None:intergenic
CGAGAATGGAAGGGTACTGT+AGG 0.576220 7_2:+84238354 Msa1083930:CDS
ACTGTAGGAGAGTTGAAGAA+TGG 0.576821 7_2:+84238369 Msa1083930:CDS
AGCTATATATCTTGGAGGAG+AGG 0.578667 7_2:-84238415 None:intergenic
CTTGTCGGCATCATCGGCGG+TGG 0.579771 7_2:+84238123 Msa1083930:CDS
GAGGAATTGATTCAGTGTCA+TGG 0.579924 7_2:+84239812 Msa1083930:CDS
ACAGTGAGGACCGTCACTCT+GGG 0.580951 7_2:-84239866 None:intergenic
AAAATTTCACCACCTACCTG+TGG 0.582228 7_2:-84239934 None:intergenic
TGTGGCACTTGAGTGAAAAT+GGG 0.582715 7_2:+84239312 Msa1083930:CDS
AGTTCTCGTGTAGACTAGCT+TGG 0.585699 7_2:+84239238 Msa1083930:intron
GTAGACTAGCTTGGTGAATG+TGG 0.592576 7_2:+84239247 Msa1083930:intron
GATGCCGACAAGTGGTTCGT+CGG 0.594689 7_2:-84238112 None:intergenic
ATTAAGTATGGAGCTGTGGA+GGG 0.598053 7_2:-84237934 None:intergenic
AGTGAAAATGGGAAACCTCG+TGG 0.603023 7_2:+84239323 Msa1083930:CDS
GTATTCTCTAGAAAAGGAAG+AGG 0.605613 7_2:-84239760 None:intergenic
AATTGATTCAGTGTCATGGA+TGG 0.607121 7_2:+84239816 Msa1083930:CDS
CCACTTGTCGGCATCATCGG+CGG 0.608760 7_2:+84238120 Msa1083930:CDS
CCCCGCAGAAGATCCTCTTA+CGG 0.611097 7_2:+84238021 Msa1083930:CDS
CCAAGATATATAGCTACTCG+TGG 0.614560 7_2:+84238423 Msa1083930:CDS
AAAACAGAACAAGGTTCCAC+AGG 0.618596 7_2:+84239918 Msa1083930:CDS
TGAATGTGGAGAGACCGTGC+TGG 0.629635 7_2:+84239261 Msa1083930:CDS
GTGAAAATGGGAAACCTCGT+GGG 0.634127 7_2:+84239324 Msa1083930:CDS
TTGCTGGCTTCCCAGAGTGA+CGG 0.638724 7_2:+84239856 Msa1083930:CDS
TGCTTATGGAAAACAGAACA+AGG 0.641251 7_2:+84239909 Msa1083930:CDS
GTTGATTAAGTATGGAGCTG+TGG 0.645418 7_2:-84237938 None:intergenic
CAGAACAAGGTTCCACAGGT+AGG 0.649100 7_2:+84239922 Msa1083930:CDS
TTCCGTAAGAGGATCTTCTG+CGG 0.652133 7_2:-84238023 None:intergenic
AACCCGATGTCATAAGCAAG+CGG 0.656989 7_2:-84239536 None:intergenic
GCAATTGTTGTTGCACACAA+TGG 0.658808 7_2:+84239356 Msa1083930:CDS
TCCAATTTACTGATCCAGCA+CGG 0.667315 7_2:-84239275 None:intergenic
AACAAGGTTCCACAGGTAGG+TGG 0.672220 7_2:+84239925 Msa1083930:CDS
TTGGTCTGAATATGAAAACA+TGG 0.672279 7_2:+84237902 Msa1083930:CDS
GTAGGAGAGTTGAAGAATGG+TGG 0.676137 7_2:+84238372 Msa1083930:CDS
TGGTTCGTCGGAGAAAGGAG+CGG 0.684420 7_2:-84238100 None:intergenic
CGGCGGTTGAGGAAGATGGA+CGG 0.686159 7_2:-84237960 None:intergenic
CCGTAAGAGGATCTTCTGCG+GGG 0.688670 7_2:-84238021 None:intergenic
GGTTTGGTTCGAGAATGGAA+GGG 0.690767 7_2:+84238345 Msa1083930:CDS
GCTATCTTCTTAGACAAACG+CGG 0.704386 7_2:+84238165 Msa1083930:CDS
CTTAGAAAGGTCCAACAGTG+AGG 0.708141 7_2:-84239880 None:intergenic
AATACCAGTGTCGAAAACGG+TGG 0.722308 7_2:-84238196 None:intergenic
ATTGCATCAAACTTCCCACG+AGG 0.748470 7_2:-84239338 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAAAAAATAGATTTTTTT+TGG - chr7_2:84238718-84238737 None:intergenic 10.0%
!!! AACTTATTTTTTTAACAAAA+TGG + chr7_2:84238903-84238922 Msa1083930:intron 10.0%
!!! AGAAAAAAATAGATTTTTTT+TGG - chr7_2:84238718-84238737 None:intergenic 10.0%
!!! AACTTATTTTTTTAACAAAA+TGG + chr7_2:84238903-84238922 Msa1083930:intron 10.0%
!!! TTTAACAAAATGGATTTTTA+TGG + chr7_2:84238913-84238932 Msa1083930:intron 15.0%
!! TTAAATATTAATGAAAGTTG+AGG + chr7_2:84239083-84239102 Msa1083930:intron 15.0%
!! TAAATATTAATGAAAGTTGA+GGG + chr7_2:84239084-84239103 Msa1083930:intron 15.0%
!!! TTTAACAAAATGGATTTTTA+TGG + chr7_2:84238913-84238932 Msa1083930:intron 15.0%
!! TTAAATATTAATGAAAGTTG+AGG + chr7_2:84239083-84239102 Msa1083930:intron 15.0%
!! TAAATATTAATGAAAGTTGA+GGG + chr7_2:84239084-84239103 Msa1083930:intron 15.0%
!!! TCATTTTTAAGTGTTTGTTT+TGG + chr7_2:84238756-84238775 Msa1083930:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr7_2:84238858-84238877 Msa1083930:intron 20.0%
!!! ATTGGCATTGTTTAATTTAA+GGG + chr7_2:84239054-84239073 Msa1083930:intron 20.0%
!! TCTTAACACAAAAATAACAT+GGG - chr7_2:84239214-84239233 None:intergenic 20.0%
!! TTCTTAACACAAAAATAACA+TGG - chr7_2:84239215-84239234 None:intergenic 20.0%
!! TACTGAAAAATGTGTAAAAA+CGG - chr7_2:84239434-84239453 None:intergenic 20.0%
!!! TTTTTACACATTTTTCAGTA+TGG + chr7_2:84239434-84239453 Msa1083930:intron 20.0%
!! TTCATTTGTTTAGCAATTAA+TGG - chr7_2:84239564-84239583 None:intergenic 20.0%
!! ATTAATTGCTAAACAAATGA+AGG + chr7_2:84239563-84239582 Msa1083930:CDS 20.0%
!!! TCATTTTTAAGTGTTTGTTT+TGG + chr7_2:84238756-84238775 Msa1083930:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr7_2:84238858-84238877 Msa1083930:intron 20.0%
!!! ATTGGCATTGTTTAATTTAA+GGG + chr7_2:84239054-84239073 Msa1083930:intron 20.0%
!! TCTTAACACAAAAATAACAT+GGG - chr7_2:84239214-84239233 None:intergenic 20.0%
!! TTCTTAACACAAAAATAACA+TGG - chr7_2:84239215-84239234 None:intergenic 20.0%
!! TACTGAAAAATGTGTAAAAA+CGG - chr7_2:84239434-84239453 None:intergenic 20.0%
!!! TTTTTACACATTTTTCAGTA+TGG + chr7_2:84239434-84239453 Msa1083930:intron 20.0%
!! TTCATTTGTTTAGCAATTAA+TGG - chr7_2:84239564-84239583 None:intergenic 20.0%
!! ATTAATTGCTAAACAAATGA+AGG + chr7_2:84239563-84239582 Msa1083930:CDS 20.0%
!! CAAACATGTTTTATGGTTTA+TGG - chr7_2:84237885-84237904 None:intergenic 25.0%
! CATAAACCATAAAACATGTT+TGG + chr7_2:84237883-84237902 Msa1083930:exon 25.0%
! TTGCTGAAATTGTTAATGTT+TGG + chr7_2:84238313-84238332 Msa1083930:CDS 25.0%
! TGAAATTGTTAATGTTTGGT+TGG + chr7_2:84238317-84238336 Msa1083930:CDS 25.0%
!!! AGAGACGTTTTTCAATTTAA+GGG - chr7_2:84238515-84238534 None:intergenic 25.0%
! TATTTGGAAAAATGACCAAA+TGG - chr7_2:84238538-84238557 None:intergenic 25.0%
! TGTATCTGTAGTGTTATATT+TGG - chr7_2:84238554-84238573 None:intergenic 25.0%
!! CACTACAGATACAATTTTAA+AGG + chr7_2:84238561-84238580 Msa1083930:intron 25.0%
! CAATATGTATAACCTTTCAT+AGG + chr7_2:84238623-84238642 Msa1083930:intron 25.0%
!!! TAACCTTTCATAGGTTTTAA+TGG + chr7_2:84238632-84238651 Msa1083930:intron 25.0%
!!! AACCTTTCATAGGTTTTAAT+GGG + chr7_2:84238633-84238652 Msa1083930:intron 25.0%
! TCCTAAAATGAAAAGCTATT+AGG + chr7_2:84238819-84238838 Msa1083930:intron 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr7_2:84238823-84238842 None:intergenic 25.0%
!!! AATGGATTTTTATGGATAGT+AGG + chr7_2:84238921-84238940 Msa1083930:intron 25.0%
! AAACAATGCCAATCAATTTA+GGG - chr7_2:84239047-84239066 None:intergenic 25.0%
! TAAACAATGCCAATCAATTT+AGG - chr7_2:84239048-84239067 None:intergenic 25.0%
!! GATTGGCATTGTTTAATTTA+AGG + chr7_2:84239053-84239072 Msa1083930:intron 25.0%
! GAAAAACTTAACGATAATCT+TGG - chr7_2:84239142-84239161 None:intergenic 25.0%
!! CAAACATGTTTTATGGTTTA+TGG - chr7_2:84237885-84237904 None:intergenic 25.0%
! CATAAACCATAAAACATGTT+TGG + chr7_2:84237883-84237902 Msa1083930:exon 25.0%
! TTGCTGAAATTGTTAATGTT+TGG + chr7_2:84238313-84238332 Msa1083930:CDS 25.0%
! TGAAATTGTTAATGTTTGGT+TGG + chr7_2:84238317-84238336 Msa1083930:CDS 25.0%
!!! AGAGACGTTTTTCAATTTAA+GGG - chr7_2:84238515-84238534 None:intergenic 25.0%
! TATTTGGAAAAATGACCAAA+TGG - chr7_2:84238538-84238557 None:intergenic 25.0%
! TGTATCTGTAGTGTTATATT+TGG - chr7_2:84238554-84238573 None:intergenic 25.0%
!! CACTACAGATACAATTTTAA+AGG + chr7_2:84238561-84238580 Msa1083930:intron 25.0%
! CAATATGTATAACCTTTCAT+AGG + chr7_2:84238623-84238642 Msa1083930:intron 25.0%
!!! TAACCTTTCATAGGTTTTAA+TGG + chr7_2:84238632-84238651 Msa1083930:intron 25.0%
!!! AACCTTTCATAGGTTTTAAT+GGG + chr7_2:84238633-84238652 Msa1083930:intron 25.0%
! TCCTAAAATGAAAAGCTATT+AGG + chr7_2:84238819-84238838 Msa1083930:intron 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr7_2:84238823-84238842 None:intergenic 25.0%
!!! AATGGATTTTTATGGATAGT+AGG + chr7_2:84238921-84238940 Msa1083930:intron 25.0%
! AAACAATGCCAATCAATTTA+GGG - chr7_2:84239047-84239066 None:intergenic 25.0%
! TAAACAATGCCAATCAATTT+AGG - chr7_2:84239048-84239067 None:intergenic 25.0%
!! GATTGGCATTGTTTAATTTA+AGG + chr7_2:84239053-84239072 Msa1083930:intron 25.0%
! GAAAAACTTAACGATAATCT+TGG - chr7_2:84239142-84239161 None:intergenic 25.0%
! TTCAGACCAAACATGTTTTA+TGG - chr7_2:84237892-84237911 None:intergenic 30.0%
TTGGTCTGAATATGAAAACA+TGG + chr7_2:84237902-84237921 Msa1083930:CDS 30.0%
! AAGGCTTATTGATGATTCTT+TGG + chr7_2:84238245-84238264 Msa1083930:CDS 30.0%
TGTTAATGTTTGGTTGGATA+AGG + chr7_2:84238323-84238342 Msa1083930:CDS 30.0%
GTTAATGTTTGGTTGGATAA+GGG + chr7_2:84238324-84238343 Msa1083930:CDS 30.0%
!! GGACTAGATTGTTGATAATA+AGG - chr7_2:84238494-84238513 None:intergenic 30.0%
!! GAGAGACGTTTTTCAATTTA+AGG - chr7_2:84238516-84238535 None:intergenic 30.0%
! GATTTCAATGATGTCTTGTT+AGG - chr7_2:84238604-84238623 None:intergenic 30.0%
!! TGCTTGTTAGAGAGATATTT+TGG + chr7_2:84238656-84238675 Msa1083930:intron 30.0%
!! TTGTTAGAGAGATATTTTGG+TGG + chr7_2:84238659-84238678 Msa1083930:intron 30.0%
! CTGCTATAGTTCTTAGATTT+TGG + chr7_2:84239173-84239192 Msa1083930:intron 30.0%
!!! TAGATTTTGGTTTTTTGCTG+TGG + chr7_2:84239186-84239205 Msa1083930:intron 30.0%
AGTAAATTGGAGCCATTTAA+TGG + chr7_2:84239287-84239306 Msa1083930:CDS 30.0%
GTAAATTGGAGCCATTTAAT+GGG + chr7_2:84239288-84239307 Msa1083930:CDS 30.0%
ATGTATAGTTATCCGACTTA+TGG + chr7_2:84239466-84239485 Msa1083930:intron 30.0%
TTACTAAAGAAGCCATAAGT+CGG - chr7_2:84239481-84239500 None:intergenic 30.0%
GTTTATCGAATCAAATGAAC+CGG - chr7_2:84239610-84239629 None:intergenic 30.0%
AGTAGAATAGAAACAATAGG+TGG - chr7_2:84239679-84239698 None:intergenic 30.0%
GACAGTAGAATAGAAACAAT+AGG - chr7_2:84239682-84239701 None:intergenic 30.0%
! ACTTCTGTATTCTCTAGAAA+AGG - chr7_2:84239769-84239788 None:intergenic 30.0%
! AATACAGAAGTTCCTTTTGA+AGG + chr7_2:84239778-84239797 Msa1083930:CDS 30.0%
CAGCAATTTCTTGGTATTAT+TGG - chr7_2:84239842-84239861 None:intergenic 30.0%
CAATAATACCAAGAAATTGC+TGG + chr7_2:84239840-84239859 Msa1083930:CDS 30.0%
! TTCAGACCAAACATGTTTTA+TGG - chr7_2:84237892-84237911 None:intergenic 30.0%
TTGGTCTGAATATGAAAACA+TGG + chr7_2:84237902-84237921 Msa1083930:CDS 30.0%
! AAGGCTTATTGATGATTCTT+TGG + chr7_2:84238245-84238264 Msa1083930:CDS 30.0%
TGTTAATGTTTGGTTGGATA+AGG + chr7_2:84238323-84238342 Msa1083930:CDS 30.0%
GTTAATGTTTGGTTGGATAA+GGG + chr7_2:84238324-84238343 Msa1083930:CDS 30.0%
!! GGACTAGATTGTTGATAATA+AGG - chr7_2:84238494-84238513 None:intergenic 30.0%
!! GAGAGACGTTTTTCAATTTA+AGG - chr7_2:84238516-84238535 None:intergenic 30.0%
! GATTTCAATGATGTCTTGTT+AGG - chr7_2:84238604-84238623 None:intergenic 30.0%
!! TGCTTGTTAGAGAGATATTT+TGG + chr7_2:84238656-84238675 Msa1083930:intron 30.0%
!! TTGTTAGAGAGATATTTTGG+TGG + chr7_2:84238659-84238678 Msa1083930:intron 30.0%
! CTGCTATAGTTCTTAGATTT+TGG + chr7_2:84239173-84239192 Msa1083930:intron 30.0%
!!! TAGATTTTGGTTTTTTGCTG+TGG + chr7_2:84239186-84239205 Msa1083930:intron 30.0%
AGTAAATTGGAGCCATTTAA+TGG + chr7_2:84239287-84239306 Msa1083930:CDS 30.0%
GTAAATTGGAGCCATTTAAT+GGG + chr7_2:84239288-84239307 Msa1083930:CDS 30.0%
ATGTATAGTTATCCGACTTA+TGG + chr7_2:84239466-84239485 Msa1083930:intron 30.0%
TTACTAAAGAAGCCATAAGT+CGG - chr7_2:84239481-84239500 None:intergenic 30.0%
GTTTATCGAATCAAATGAAC+CGG - chr7_2:84239610-84239629 None:intergenic 30.0%
AGTAGAATAGAAACAATAGG+TGG - chr7_2:84239679-84239698 None:intergenic 30.0%
GACAGTAGAATAGAAACAAT+AGG - chr7_2:84239682-84239701 None:intergenic 30.0%
! ACTTCTGTATTCTCTAGAAA+AGG - chr7_2:84239769-84239788 None:intergenic 30.0%
! AATACAGAAGTTCCTTTTGA+AGG + chr7_2:84239778-84239797 Msa1083930:CDS 30.0%
CAGCAATTTCTTGGTATTAT+TGG - chr7_2:84239842-84239861 None:intergenic 30.0%
CAATAATACCAAGAAATTGC+TGG + chr7_2:84239840-84239859 Msa1083930:CDS 30.0%
! ATGAATACCAGTGTCGAAAA+CGG - chr7_2:84238202-84238221 None:intergenic 35.0%
TTGAAAAACGTCTCTCCATT+TGG + chr7_2:84238520-84238539 Msa1083930:intron 35.0%
CACCCATTAAAACCTATGAA+AGG - chr7_2:84238638-84238657 None:intergenic 35.0%
!!! ATATTTTGGTGGAGAGACTA+AGG + chr7_2:84238670-84238689 Msa1083930:intron 35.0%
!!! TATTTTGGTGGAGAGACTAA+GGG + chr7_2:84238671-84238690 Msa1083930:intron 35.0%
ACTCGACCTTTACAATTTGA+AGG + chr7_2:84239115-84239134 Msa1083930:intron 35.0%
CTTGGTCCTTCAAATTGTAA+AGG - chr7_2:84239124-84239143 None:intergenic 35.0%
AAACAAATGAAGGTCAGTGT+AGG + chr7_2:84239573-84239592 Msa1083930:intron 35.0%
GCTGGAATTGAGTTCAATAT+GGG + chr7_2:84239714-84239733 Msa1083930:CDS 35.0%
! GTATTCTCTAGAAAAGGAAG+AGG - chr7_2:84239763-84239782 None:intergenic 35.0%
! AATTGATTCAGTGTCATGGA+TGG + chr7_2:84239816-84239835 Msa1083930:CDS 35.0%
ATAAGCAGCAGTACTTAGAA+AGG - chr7_2:84239896-84239915 None:intergenic 35.0%
! TTTCTAAGTACTGCTGCTTA+TGG + chr7_2:84239895-84239914 Msa1083930:CDS 35.0%
TGCTTATGGAAAACAGAACA+AGG + chr7_2:84239909-84239928 Msa1083930:CDS 35.0%
! ATGAATACCAGTGTCGAAAA+CGG - chr7_2:84238202-84238221 None:intergenic 35.0%
TTGAAAAACGTCTCTCCATT+TGG + chr7_2:84238520-84238539 Msa1083930:intron 35.0%
CACCCATTAAAACCTATGAA+AGG - chr7_2:84238638-84238657 None:intergenic 35.0%
!!! ATATTTTGGTGGAGAGACTA+AGG + chr7_2:84238670-84238689 Msa1083930:intron 35.0%
!!! TATTTTGGTGGAGAGACTAA+GGG + chr7_2:84238671-84238690 Msa1083930:intron 35.0%
ACTCGACCTTTACAATTTGA+AGG + chr7_2:84239115-84239134 Msa1083930:intron 35.0%
CTTGGTCCTTCAAATTGTAA+AGG - chr7_2:84239124-84239143 None:intergenic 35.0%
AAACAAATGAAGGTCAGTGT+AGG + chr7_2:84239573-84239592 Msa1083930:intron 35.0%
GCTGGAATTGAGTTCAATAT+GGG + chr7_2:84239714-84239733 Msa1083930:CDS 35.0%
! GTATTCTCTAGAAAAGGAAG+AGG - chr7_2:84239763-84239782 None:intergenic 35.0%
! AATTGATTCAGTGTCATGGA+TGG + chr7_2:84239816-84239835 Msa1083930:CDS 35.0%
ATAAGCAGCAGTACTTAGAA+AGG - chr7_2:84239896-84239915 None:intergenic 35.0%
! TTTCTAAGTACTGCTGCTTA+TGG + chr7_2:84239895-84239914 Msa1083930:CDS 35.0%
TGCTTATGGAAAACAGAACA+AGG + chr7_2:84239909-84239928 Msa1083930:CDS 35.0%
ATTAAGTATGGAGCTGTGGA+GGG - chr7_2:84237937-84237956 None:intergenic 40.0%
GTTGATTAAGTATGGAGCTG+TGG - chr7_2:84237941-84237960 None:intergenic 40.0%
GATGGACGGTTGATTAAGTA+TGG - chr7_2:84237949-84237968 None:intergenic 40.0%
! TGGTTTTTCCATTTTCACCG+TGG - chr7_2:84237989-84238008 None:intergenic 40.0%
TTTACGAGAAGTTCCGTAAG+AGG - chr7_2:84238037-84238056 None:intergenic 40.0%
!! AGTGACTTGCTCTTGTTTGA+AGG - chr7_2:84238076-84238095 None:intergenic 40.0%
GCTATCTTCTTAGACAAACG+CGG + chr7_2:84238165-84238184 Msa1083930:CDS 40.0%
! GTTTTCGACACTGGTATTCA+TGG + chr7_2:84238201-84238220 Msa1083930:CDS 40.0%
CAGTAAAAAACTGAGCAGCA+TGG - chr7_2:84238278-84238297 None:intergenic 40.0%
TGTTTGGTTGGATAAGGGTT+TGG + chr7_2:84238329-84238348 Msa1083930:CDS 40.0%
! ATAAGGGTTTGGTTCGAGAA+TGG + chr7_2:84238340-84238359 Msa1083930:CDS 40.0%
ACTGTAGGAGAGTTGAAGAA+TGG + chr7_2:84238369-84238388 Msa1083930:CDS 40.0%
GCTATATATCTTGGAGGAGA+GGG - chr7_2:84238417-84238436 None:intergenic 40.0%
AGCTATATATCTTGGAGGAG+AGG - chr7_2:84238418-84238437 None:intergenic 40.0%
CGAGTAGCTATATATCTTGG+AGG - chr7_2:84238423-84238442 None:intergenic 40.0%
CCACGAGTAGCTATATATCT+TGG - chr7_2:84238426-84238445 None:intergenic 40.0%
CCAAGATATATAGCTACTCG+TGG + chr7_2:84238423-84238442 Msa1083930:CDS 40.0%
!! ATTCCTTACTCTCTGAGGTT+AGG + chr7_2:84238463-84238482 Msa1083930:intron 40.0%
CAAACGCACCCTAAATTGAT+TGG + chr7_2:84239036-84239055 Msa1083930:intron 40.0%
TCCAATTTACTGATCCAGCA+CGG - chr7_2:84239278-84239297 None:intergenic 40.0%
AAGTGCCACATCCCATTAAA+TGG - chr7_2:84239302-84239321 None:intergenic 40.0%
ATGTGGCACTTGAGTGAAAA+TGG + chr7_2:84239311-84239330 Msa1083930:CDS 40.0%
TGTGGCACTTGAGTGAAAAT+GGG + chr7_2:84239312-84239331 Msa1083930:CDS 40.0%
! GCAATTGTTGTTGCACACAA+TGG + chr7_2:84239356-84239375 Msa1083930:CDS 40.0%
! CTATTTCTCTATTTGCCGAC+AGG + chr7_2:84239501-84239520 Msa1083930:intron 40.0%
TAACCGCTTGCTTATGACAT+CGG + chr7_2:84239533-84239552 Msa1083930:CDS 40.0%
CGAATCAAATGAACCGGAAA+GGG - chr7_2:84239604-84239623 None:intergenic 40.0%
TCGAATCAAATGAACCGGAA+AGG - chr7_2:84239605-84239624 None:intergenic 40.0%
TTCTACTGTCCATTGTTCAG+AGG + chr7_2:84239692-84239711 Msa1083930:intron 40.0%
GGCTGGAATTGAGTTCAATA+TGG + chr7_2:84239713-84239732 Msa1083930:CDS 40.0%
TTCCTCAAACGCTGCTAAAA+GGG - chr7_2:84239740-84239759 None:intergenic 40.0%
CTCACAAAAGCTCCTTCAAA+AGG - chr7_2:84239793-84239812 None:intergenic 40.0%
! TTTGAAGGAGCTTTTGTGAG+AGG + chr7_2:84239793-84239812 Msa1083930:CDS 40.0%
! GAGGAATTGATTCAGTGTCA+TGG + chr7_2:84239812-84239831 Msa1083930:CDS 40.0%
AAAACAGAACAAGGTTCCAC+AGG + chr7_2:84239918-84239937 Msa1083930:CDS 40.0%
AAAATTTCACCACCTACCTG+TGG - chr7_2:84239937-84239956 None:intergenic 40.0%
ATTAAGTATGGAGCTGTGGA+GGG - chr7_2:84237937-84237956 None:intergenic 40.0%
GTTGATTAAGTATGGAGCTG+TGG - chr7_2:84237941-84237960 None:intergenic 40.0%
GATGGACGGTTGATTAAGTA+TGG - chr7_2:84237949-84237968 None:intergenic 40.0%
! TGGTTTTTCCATTTTCACCG+TGG - chr7_2:84237989-84238008 None:intergenic 40.0%
TTTACGAGAAGTTCCGTAAG+AGG - chr7_2:84238037-84238056 None:intergenic 40.0%
!! AGTGACTTGCTCTTGTTTGA+AGG - chr7_2:84238076-84238095 None:intergenic 40.0%
GCTATCTTCTTAGACAAACG+CGG + chr7_2:84238165-84238184 Msa1083930:CDS 40.0%
! GTTTTCGACACTGGTATTCA+TGG + chr7_2:84238201-84238220 Msa1083930:CDS 40.0%
CAGTAAAAAACTGAGCAGCA+TGG - chr7_2:84238278-84238297 None:intergenic 40.0%
TGTTTGGTTGGATAAGGGTT+TGG + chr7_2:84238329-84238348 Msa1083930:CDS 40.0%
! ATAAGGGTTTGGTTCGAGAA+TGG + chr7_2:84238340-84238359 Msa1083930:CDS 40.0%
ACTGTAGGAGAGTTGAAGAA+TGG + chr7_2:84238369-84238388 Msa1083930:CDS 40.0%
GCTATATATCTTGGAGGAGA+GGG - chr7_2:84238417-84238436 None:intergenic 40.0%
AGCTATATATCTTGGAGGAG+AGG - chr7_2:84238418-84238437 None:intergenic 40.0%
CGAGTAGCTATATATCTTGG+AGG - chr7_2:84238423-84238442 None:intergenic 40.0%
CCACGAGTAGCTATATATCT+TGG - chr7_2:84238426-84238445 None:intergenic 40.0%
CCAAGATATATAGCTACTCG+TGG + chr7_2:84238423-84238442 Msa1083930:CDS 40.0%
!! ATTCCTTACTCTCTGAGGTT+AGG + chr7_2:84238463-84238482 Msa1083930:intron 40.0%
CAAACGCACCCTAAATTGAT+TGG + chr7_2:84239036-84239055 Msa1083930:intron 40.0%
TCCAATTTACTGATCCAGCA+CGG - chr7_2:84239278-84239297 None:intergenic 40.0%
AAGTGCCACATCCCATTAAA+TGG - chr7_2:84239302-84239321 None:intergenic 40.0%
ATGTGGCACTTGAGTGAAAA+TGG + chr7_2:84239311-84239330 Msa1083930:CDS 40.0%
TGTGGCACTTGAGTGAAAAT+GGG + chr7_2:84239312-84239331 Msa1083930:CDS 40.0%
! GCAATTGTTGTTGCACACAA+TGG + chr7_2:84239356-84239375 Msa1083930:CDS 40.0%
! CTATTTCTCTATTTGCCGAC+AGG + chr7_2:84239501-84239520 Msa1083930:intron 40.0%
TAACCGCTTGCTTATGACAT+CGG + chr7_2:84239533-84239552 Msa1083930:CDS 40.0%
CGAATCAAATGAACCGGAAA+GGG - chr7_2:84239604-84239623 None:intergenic 40.0%
TCGAATCAAATGAACCGGAA+AGG - chr7_2:84239605-84239624 None:intergenic 40.0%
TTCTACTGTCCATTGTTCAG+AGG + chr7_2:84239692-84239711 Msa1083930:intron 40.0%
GGCTGGAATTGAGTTCAATA+TGG + chr7_2:84239713-84239732 Msa1083930:CDS 40.0%
TTCCTCAAACGCTGCTAAAA+GGG - chr7_2:84239740-84239759 None:intergenic 40.0%
CTCACAAAAGCTCCTTCAAA+AGG - chr7_2:84239793-84239812 None:intergenic 40.0%
! TTTGAAGGAGCTTTTGTGAG+AGG + chr7_2:84239793-84239812 Msa1083930:CDS 40.0%
! GAGGAATTGATTCAGTGTCA+TGG + chr7_2:84239812-84239831 Msa1083930:CDS 40.0%
AAAACAGAACAAGGTTCCAC+AGG + chr7_2:84239918-84239937 Msa1083930:CDS 40.0%
AAAATTTCACCACCTACCTG+TGG - chr7_2:84239937-84239956 None:intergenic 40.0%
GATTAAGTATGGAGCTGTGG+AGG - chr7_2:84237938-84237957 None:intergenic 45.0%
TTCCGTAAGAGGATCTTCTG+CGG - chr7_2:84238026-84238045 None:intergenic 45.0%
GAAGATAGCGCAAATGAGAC+CGG - chr7_2:84238154-84238173 None:intergenic 45.0%
! AATACCAGTGTCGAAAACGG+TGG - chr7_2:84238199-84238218 None:intergenic 45.0%
GACACTGGTATTCATGGTCT+TGG + chr7_2:84238207-84238226 Msa1083930:CDS 45.0%
! ACTGGTATTCATGGTCTTGG+AGG + chr7_2:84238210-84238229 Msa1083930:CDS 45.0%
! TCATGGTCTTGGAGGAAGAT+TGG + chr7_2:84238218-84238237 Msa1083930:CDS 45.0%
! CATGGTCTTGGAGGAAGATT+GGG + chr7_2:84238219-84238238 Msa1083930:CDS 45.0%
TTGGAGGAAGATTGGGAACA+AGG + chr7_2:84238226-84238245 Msa1083930:CDS 45.0%
! GGTTTGGTTCGAGAATGGAA+GGG + chr7_2:84238345-84238364 Msa1083930:CDS 45.0%
GTAGGAGAGTTGAAGAATGG+TGG + chr7_2:84238372-84238391 Msa1083930:CDS 45.0%
CTTGGAGGAGAGGGTAAAAA+TGG - chr7_2:84238408-84238427 None:intergenic 45.0%
!! TGCTGATTCCTTACTCTCTG+AGG + chr7_2:84238458-84238477 Msa1083930:CDS 45.0%
CAACCTAACCTCAGAGAGTA+AGG - chr7_2:84238469-84238488 None:intergenic 45.0%
!! GACTAAGGGTGCGTTTGTTT+TGG + chr7_2:84238685-84238704 Msa1083930:intron 45.0%
! AGTTCTCGTGTAGACTAGCT+TGG + chr7_2:84239238-84239257 Msa1083930:intron 45.0%
!! GTAGACTAGCTTGGTGAATG+TGG + chr7_2:84239247-84239266 Msa1083930:intron 45.0%
ACCGTGCTGGATCAGTAAAT+TGG + chr7_2:84239274-84239293 Msa1083930:CDS 45.0%
TGGAGCCATTTAATGGGATG+TGG + chr7_2:84239294-84239313 Msa1083930:CDS 45.0%
AGTGAAAATGGGAAACCTCG+TGG + chr7_2:84239323-84239342 Msa1083930:CDS 45.0%
GTGAAAATGGGAAACCTCGT+GGG + chr7_2:84239324-84239343 Msa1083930:CDS 45.0%
ATTGCATCAAACTTCCCACG+AGG - chr7_2:84239341-84239360 None:intergenic 45.0%
! CGGTTAGCACATTTTCCTGT+CGG - chr7_2:84239519-84239538 None:intergenic 45.0%
AACCGCTTGCTTATGACATC+GGG + chr7_2:84239534-84239553 Msa1083930:CDS 45.0%
AACCCGATGTCATAAGCAAG+CGG - chr7_2:84239539-84239558 None:intergenic 45.0%
AGTGTAGGACATTCCCTTTC+CGG + chr7_2:84239588-84239607 Msa1083930:intron 45.0%
CAATTCCAGCCTCTGAACAA+TGG - chr7_2:84239704-84239723 None:intergenic 45.0%
GTTCCTCAAACGCTGCTAAA+AGG - chr7_2:84239741-84239760 None:intergenic 45.0%
CTTAGAAAGGTCCAACAGTG+AGG - chr7_2:84239883-84239902 None:intergenic 45.0%
GATTAAGTATGGAGCTGTGG+AGG - chr7_2:84237938-84237957 None:intergenic 45.0%
TTCCGTAAGAGGATCTTCTG+CGG - chr7_2:84238026-84238045 None:intergenic 45.0%
GAAGATAGCGCAAATGAGAC+CGG - chr7_2:84238154-84238173 None:intergenic 45.0%
! AATACCAGTGTCGAAAACGG+TGG - chr7_2:84238199-84238218 None:intergenic 45.0%
GACACTGGTATTCATGGTCT+TGG + chr7_2:84238207-84238226 Msa1083930:CDS 45.0%
! ACTGGTATTCATGGTCTTGG+AGG + chr7_2:84238210-84238229 Msa1083930:CDS 45.0%
! TCATGGTCTTGGAGGAAGAT+TGG + chr7_2:84238218-84238237 Msa1083930:CDS 45.0%
! CATGGTCTTGGAGGAAGATT+GGG + chr7_2:84238219-84238238 Msa1083930:CDS 45.0%
TTGGAGGAAGATTGGGAACA+AGG + chr7_2:84238226-84238245 Msa1083930:CDS 45.0%
! GGTTTGGTTCGAGAATGGAA+GGG + chr7_2:84238345-84238364 Msa1083930:CDS 45.0%
GTAGGAGAGTTGAAGAATGG+TGG + chr7_2:84238372-84238391 Msa1083930:CDS 45.0%
CTTGGAGGAGAGGGTAAAAA+TGG - chr7_2:84238408-84238427 None:intergenic 45.0%
!! TGCTGATTCCTTACTCTCTG+AGG + chr7_2:84238458-84238477 Msa1083930:CDS 45.0%
CAACCTAACCTCAGAGAGTA+AGG - chr7_2:84238469-84238488 None:intergenic 45.0%
!! GACTAAGGGTGCGTTTGTTT+TGG + chr7_2:84238685-84238704 Msa1083930:intron 45.0%
! AGTTCTCGTGTAGACTAGCT+TGG + chr7_2:84239238-84239257 Msa1083930:intron 45.0%
!! GTAGACTAGCTTGGTGAATG+TGG + chr7_2:84239247-84239266 Msa1083930:intron 45.0%
ACCGTGCTGGATCAGTAAAT+TGG + chr7_2:84239274-84239293 Msa1083930:CDS 45.0%
TGGAGCCATTTAATGGGATG+TGG + chr7_2:84239294-84239313 Msa1083930:CDS 45.0%
AGTGAAAATGGGAAACCTCG+TGG + chr7_2:84239323-84239342 Msa1083930:CDS 45.0%
GTGAAAATGGGAAACCTCGT+GGG + chr7_2:84239324-84239343 Msa1083930:CDS 45.0%
ATTGCATCAAACTTCCCACG+AGG - chr7_2:84239341-84239360 None:intergenic 45.0%
! CGGTTAGCACATTTTCCTGT+CGG - chr7_2:84239519-84239538 None:intergenic 45.0%
AACCGCTTGCTTATGACATC+GGG + chr7_2:84239534-84239553 Msa1083930:CDS 45.0%
AACCCGATGTCATAAGCAAG+CGG - chr7_2:84239539-84239558 None:intergenic 45.0%
AGTGTAGGACATTCCCTTTC+CGG + chr7_2:84239588-84239607 Msa1083930:intron 45.0%
CAATTCCAGCCTCTGAACAA+TGG - chr7_2:84239704-84239723 None:intergenic 45.0%
GTTCCTCAAACGCTGCTAAA+AGG - chr7_2:84239741-84239760 None:intergenic 45.0%
CTTAGAAAGGTCCAACAGTG+AGG - chr7_2:84239883-84239902 None:intergenic 45.0%
! TTCCATTTTCACCGTGGCGA+CGG - chr7_2:84237983-84238002 None:intergenic 50.0%
TCCGTAAGAGGATCTTCTGC+GGG - chr7_2:84238025-84238044 None:intergenic 50.0%
ACAAGTGGTTCGTCGGAGAA+AGG - chr7_2:84238108-84238127 None:intergenic 50.0%
TTCTCCGACGAACCACTTGT+CGG + chr7_2:84238108-84238127 Msa1083930:CDS 50.0%
GAACCACTTGTCGGCATCAT+CGG + chr7_2:84238117-84238136 Msa1083930:CDS 50.0%
! GGGTTTGGTTCGAGAATGGA+AGG + chr7_2:84238344-84238363 Msa1083930:CDS 50.0%
!! CGAGAATGGAAGGGTACTGT+AGG + chr7_2:84238354-84238373 Msa1083930:CDS 50.0%
ACTGTCCATTGTTCAGAGGC+TGG + chr7_2:84239696-84239715 Msa1083930:intron 50.0%
CTGGGAAGCCAGCAATTTCT+TGG - chr7_2:84239851-84239870 None:intergenic 50.0%
CAGAACAAGGTTCCACAGGT+AGG + chr7_2:84239922-84239941 Msa1083930:CDS 50.0%
AACAAGGTTCCACAGGTAGG+TGG + chr7_2:84239925-84239944 Msa1083930:CDS 50.0%
! TTCCATTTTCACCGTGGCGA+CGG - chr7_2:84237983-84238002 None:intergenic 50.0%
TCCGTAAGAGGATCTTCTGC+GGG - chr7_2:84238025-84238044 None:intergenic 50.0%
ACAAGTGGTTCGTCGGAGAA+AGG - chr7_2:84238108-84238127 None:intergenic 50.0%
TTCTCCGACGAACCACTTGT+CGG + chr7_2:84238108-84238127 Msa1083930:CDS 50.0%
GAACCACTTGTCGGCATCAT+CGG + chr7_2:84238117-84238136 Msa1083930:CDS 50.0%
! GGGTTTGGTTCGAGAATGGA+AGG + chr7_2:84238344-84238363 Msa1083930:CDS 50.0%
!! CGAGAATGGAAGGGTACTGT+AGG + chr7_2:84238354-84238373 Msa1083930:CDS 50.0%
ACTGTCCATTGTTCAGAGGC+TGG + chr7_2:84239696-84239715 Msa1083930:intron 50.0%
CTGGGAAGCCAGCAATTTCT+TGG - chr7_2:84239851-84239870 None:intergenic 50.0%
CAGAACAAGGTTCCACAGGT+AGG + chr7_2:84239922-84239941 Msa1083930:CDS 50.0%
AACAAGGTTCCACAGGTAGG+TGG + chr7_2:84239925-84239944 Msa1083930:CDS 50.0%
GATCTTCTGCGGGGTTTGGA+GGG - chr7_2:84238015-84238034 None:intergenic 55.0%
AGAGGATCTTCTGCGGGGTT+TGG - chr7_2:84238019-84238038 None:intergenic 55.0%
CCGTAAGAGGATCTTCTGCG+GGG - chr7_2:84238024-84238043 None:intergenic 55.0%
CCCCGCAGAAGATCCTCTTA+CGG + chr7_2:84238021-84238040 Msa1083930:CDS 55.0%
TGGTTCGTCGGAGAAAGGAG+CGG - chr7_2:84238103-84238122 None:intergenic 55.0%
GATGCCGACAAGTGGTTCGT+CGG - chr7_2:84238115-84238134 None:intergenic 55.0%
ATCATCGGCGGTGGTATCTC+CGG + chr7_2:84238132-84238151 Msa1083930:CDS 55.0%
TGAATGTGGAGAGACCGTGC+TGG + chr7_2:84239261-84239280 Msa1083930:CDS 55.0%
! GGCCCTTTTAGCAGCGTTTG+AGG + chr7_2:84239735-84239754 Msa1083930:CDS 55.0%
!! TTGCTGGCTTCCCAGAGTGA+CGG + chr7_2:84239856-84239875 Msa1083930:CDS 55.0%
ACAGTGAGGACCGTCACTCT+GGG - chr7_2:84239869-84239888 None:intergenic 55.0%
AACAGTGAGGACCGTCACTC+TGG - chr7_2:84239870-84239889 None:intergenic 55.0%
AGAGTGACGGTCCTCACTGT+TGG + chr7_2:84239869-84239888 Msa1083930:CDS 55.0%
GATCTTCTGCGGGGTTTGGA+GGG - chr7_2:84238015-84238034 None:intergenic 55.0%
AGAGGATCTTCTGCGGGGTT+TGG - chr7_2:84238019-84238038 None:intergenic 55.0%
CCGTAAGAGGATCTTCTGCG+GGG - chr7_2:84238024-84238043 None:intergenic 55.0%
CCCCGCAGAAGATCCTCTTA+CGG + chr7_2:84238021-84238040 Msa1083930:CDS 55.0%
TGGTTCGTCGGAGAAAGGAG+CGG - chr7_2:84238103-84238122 None:intergenic 55.0%
GATGCCGACAAGTGGTTCGT+CGG - chr7_2:84238115-84238134 None:intergenic 55.0%
ATCATCGGCGGTGGTATCTC+CGG + chr7_2:84238132-84238151 Msa1083930:CDS 55.0%
TGAATGTGGAGAGACCGTGC+TGG + chr7_2:84239261-84239280 Msa1083930:CDS 55.0%
! GGCCCTTTTAGCAGCGTTTG+AGG + chr7_2:84239735-84239754 Msa1083930:CDS 55.0%
!! TTGCTGGCTTCCCAGAGTGA+CGG + chr7_2:84239856-84239875 Msa1083930:CDS 55.0%
ACAGTGAGGACCGTCACTCT+GGG - chr7_2:84239869-84239888 None:intergenic 55.0%
AACAGTGAGGACCGTCACTC+TGG - chr7_2:84239870-84239889 None:intergenic 55.0%
AGAGTGACGGTCCTCACTGT+TGG + chr7_2:84239869-84239888 Msa1083930:CDS 55.0%
CGGCGGTTGAGGAAGATGGA+CGG - chr7_2:84237963-84237982 None:intergenic 60.0%
! CATTTTCACCGTGGCGACGG+CGG - chr7_2:84237980-84237999 None:intergenic 60.0%
GGATCTTCTGCGGGGTTTGG+AGG - chr7_2:84238016-84238035 None:intergenic 60.0%
CCACTTGTCGGCATCATCGG+CGG + chr7_2:84238120-84238139 Msa1083930:CDS 60.0%
! CGCTCCACCGTTTTCGACAC+TGG + chr7_2:84238192-84238211 Msa1083930:CDS 60.0%
CGGCGGTTGAGGAAGATGGA+CGG - chr7_2:84237963-84237982 None:intergenic 60.0%
! CATTTTCACCGTGGCGACGG+CGG - chr7_2:84237980-84237999 None:intergenic 60.0%
GGATCTTCTGCGGGGTTTGG+AGG - chr7_2:84238016-84238035 None:intergenic 60.0%
CCACTTGTCGGCATCATCGG+CGG + chr7_2:84238120-84238139 Msa1083930:CDS 60.0%
! CGCTCCACCGTTTTCGACAC+TGG + chr7_2:84238192-84238211 Msa1083930:CDS 60.0%
GCGACGGCGGTTGAGGAAGA+TGG - chr7_2:84237967-84237986 None:intergenic 65.0%
TTCCTCAACCGCCGTCGCCA+CGG + chr7_2:84237969-84237988 Msa1083930:CDS 65.0%
CGCCGTCGCCACGGTGAAAA+TGG + chr7_2:84237978-84237997 Msa1083930:CDS 65.0%
CTTCTGCGGGGTTTGGAGGG+TGG - chr7_2:84238012-84238031 None:intergenic 65.0%
CCGCCGATGATGCCGACAAG+TGG - chr7_2:84238123-84238142 None:intergenic 65.0%
CTTGTCGGCATCATCGGCGG+TGG + chr7_2:84238123-84238142 Msa1083930:CDS 65.0%
GCGACGGCGGTTGAGGAAGA+TGG - chr7_2:84237967-84237986 None:intergenic 65.0%
TTCCTCAACCGCCGTCGCCA+CGG + chr7_2:84237969-84237988 Msa1083930:CDS 65.0%
CGCCGTCGCCACGGTGAAAA+TGG + chr7_2:84237978-84237997 Msa1083930:CDS 65.0%
CTTCTGCGGGGTTTGGAGGG+TGG - chr7_2:84238012-84238031 None:intergenic 65.0%
CCGCCGATGATGCCGACAAG+TGG - chr7_2:84238123-84238142 None:intergenic 65.0%
CTTGTCGGCATCATCGGCGG+TGG + chr7_2:84238123-84238142 Msa1083930:CDS 65.0%
CTGCGGGGTTTGGAGGGTGG+TGG - chr7_2:84238009-84238028 None:intergenic 70.0%
CTGCGGGGTTTGGAGGGTGG+TGG - chr7_2:84238009-84238028 None:intergenic 70.0%
CACCGTGGCGACGGCGGTTG+AGG - chr7_2:84237974-84237993 None:intergenic 75.0%
CACCGTGGCGACGGCGGTTG+AGG - chr7_2:84237974-84237993 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84237860 84239969 84237860 ID=Msa1083930;Name=Msa1083930
chr7_2 mRNA 84237860 84239969 84237860 ID=Msa1083930-mRNA-1;Parent=Msa1083930;Name=Msa1083930-mRNA-1;_AED=0.35;_eAED=0.35;_QI=38|1|0.75|1|1|1|4|0|342
chr7_2 exon 84237860 84238479 84237860 ID=Msa1083930-mRNA-1:exon:22444;Parent=Msa1083930-mRNA-1
chr7_2 exon 84239251 84239377 84239251 ID=Msa1083930-mRNA-1:exon:22445;Parent=Msa1083930-mRNA-1
chr7_2 exon 84239523 84239584 84239523 ID=Msa1083930-mRNA-1:exon:22446;Parent=Msa1083930-mRNA-1
chr7_2 exon 84239712 84239969 84239712 ID=Msa1083930-mRNA-1:exon:22447;Parent=Msa1083930-mRNA-1
chr7_2 five_prime_UTR 84237860 84237897 84237860 ID=Msa1083930-mRNA-1:five_prime_utr;Parent=Msa1083930-mRNA-1
chr7_2 CDS 84237898 84238479 84237898 ID=Msa1083930-mRNA-1:cds;Parent=Msa1083930-mRNA-1
chr7_2 CDS 84239251 84239377 84239251 ID=Msa1083930-mRNA-1:cds;Parent=Msa1083930-mRNA-1
chr7_2 CDS 84239523 84239584 84239523 ID=Msa1083930-mRNA-1:cds;Parent=Msa1083930-mRNA-1
chr7_2 CDS 84239712 84239969 84239712 ID=Msa1083930-mRNA-1:cds;Parent=Msa1083930-mRNA-1
Gene Sequence

>Msa1083930

ATGTTTGGTCTGAATATGAAAACATGGAAATTGTTACCCTCCACAGCTCCATACTTAATCAACCGTCCATCTTCCTCAACCGCCGTCGCCACGGTGAAAATGGAAAAACCACCACCCTCCAAACCCCGCAGAAGATCCTCTTACGGAACTTCTCGTAAATCAATTCTCAAAAAAACCTTCAAACAAGAGCAAGTCACTTTCACCGCTCCTTTCTCCGACGAACCACTTGTCGGCATCATCGGCGGTGGTATCTCCGGTCTCATTTGCGCTATCTTCTTAGACAAACGCGGCATTCGCTCCACCGTTTTCGACACTGGTATTCATGGTCTTGGAGGAAGATTGGGAACAAGGCTTATTGATGATTCTTTGGTTTTTGACCATGCTGCTCAGTTTTTTACTGTCAATGATTCTCGTTTTGCTGAAATTGTTAATGTTTGGTTGGATAAGGGTTTGGTTCGAGAATGGAAGGGTACTGTAGGAGAGTTGAAGAATGGTGGTGAATTTCTTCCATTTTTACCCTCTCCTCCAAGATATATAGCTACTCGTGGAATGCGCTTTCTTGCTGATTCCTTACTCTCTGAGACTAGCTTGGTGAATGTGGAGAGACCGTGCTGGATCAGTAAATTGGAGCCATTTAATGGGATGTGGCACTTGAGTGAAAATGGGAAACCTCGTGGGAAGTTTGATGCAATTGTTGTTGCACACAATGGAAAATGTGCTAACCGCTTGCTTATGACATCGGGTTTGCCATTAATTGCTAAACAAATGAAGAGGCTGGAATTGAGTTCAATATGGGCCCTTTTAGCAGCGTTTGAGGAACCTCTTCCTTTTCTAGAGAATACAGAAGTTCCTTTTGAAGGAGCTTTTGTGAGAGGAATTGATTCAGTGTCATGGATGGCCAATAATACCAAGAAATTGCTGGCTTCCCAGAGTGACGGTCCTCACTGTTGGACCTTTCTAAGTACTGCTGCTTATGGAAAACAGAACAAGGTTCCACAGGTAGGTGGTGAAATTTTCAAAACAGAATGA

Protein sequence

>Msa1083930

MFGLNMKTWKLLPSTAPYLINRPSSSTAVATVKMEKPPPSKPRRRSSYGTSRKSILKKTFKQEQVTFTAPFSDEPLVGIIGGGISGLICAIFLDKRGIRSTVFDTGIHGLGGRLGTRLIDDSLVFDHAAQFFTVNDSRFAEIVNVWLDKGLVREWKGTVGELKNGGEFLPFLPSPPRYIATRGMRFLADSLLSETSLVNVERPCWISKLEPFNGMWHLSENGKPRGKFDAIVVAHNGKCANRLLMTSGLPLIAKQMKRLELSSIWALLAAFEEPLPFLENTEVPFEGAFVRGIDSVSWMANNTKKLLASQSDGPHCWTFLSTAAYGKQNKVPQVGGEIFKTE*