AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1303030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303030 MtrunA17_Chr4g0074521 96.915 389 11 1 37 425 92 479 0.0 776
Msa1303030 MtrunA17_Chr0c30g0494091 97.351 302 8 0 37 338 92 393 0.0 603
Msa1303030 MtrunA17_Chr3g0121351 31.481 378 197 13 37 387 155 497 3.65e-34 134
Msa1303030 MtrunA17_Chr2g0309551 26.667 435 236 11 37 416 119 525 1.27e-30 124
Msa1303030 MtrunA17_Chr1g0176041 30.623 369 211 12 37 387 164 505 2.23e-30 123
Msa1303030 MtrunA17_Chr7g0236841 28.689 366 228 11 37 399 20 355 9.91e-29 117
Msa1303030 MtrunA17_Chr2g0330401 27.970 404 235 12 35 416 101 470 1.55e-28 117
Msa1303030 MtrunA17_Chr4g0063551 29.921 381 201 15 37 387 150 494 1.59e-28 118
Msa1303030 MtrunA17_Chr6g0483491 28.415 366 229 11 37 399 20 355 2.06e-28 116
Msa1303030 MtrunA17_Chr2g0293631 28.997 369 209 9 35 387 501 832 2.07e-27 115
Msa1303030 MtrunA17_Chr2g0299681 26.509 381 233 12 45 416 59 401 5.82e-27 111
Msa1303030 MtrunA17_Chr3g0107851 30.833 360 198 15 46 387 136 462 6.72e-27 113
Msa1303030 MtrunA17_Chr6g0449911 28.780 410 225 13 35 417 170 539 2.56e-26 111
Msa1303030 MtrunA17_Chr4g0040761 28.125 352 210 12 45 387 37 354 3.50e-26 111
Msa1303030 MtrunA17_Chr6g0466611 26.316 399 238 14 41 417 156 520 4.86e-26 110
Msa1303030 MtrunA17_Chr0c30g0494081 86.275 51 7 0 340 390 13 63 5.19e-26 100
Msa1303030 MtrunA17_Chr4g0029191 25.843 445 239 14 11 387 33 454 6.52e-26 110
Msa1303030 MtrunA17_Chr1g0200181 26.000 400 239 13 1 387 133 488 1.29e-25 109
Msa1303030 MtrunA17_Chr1g0157691 25.450 444 265 15 1 424 135 532 1.37e-25 109
Msa1303030 MtrunA17_Chr5g0409981 29.121 364 199 14 45 387 120 445 2.09e-25 108
Msa1303030 MtrunA17_Chr7g0263771 26.146 371 209 11 35 387 141 464 4.66e-25 107
Msa1303030 MtrunA17_Chr2g0329931 25.648 347 221 8 45 387 59 372 7.78e-25 105
Msa1303030 MtrunA17_Chr4g0062301 28.610 367 208 12 38 387 108 437 9.12e-25 106
Msa1303030 MtrunA17_Chr4g0070981 26.012 346 221 8 45 387 59 372 1.32e-24 105
Msa1303030 MtrunA17_Chr2g0301281 25.806 434 234 14 23 387 37 451 4.85e-24 104
Msa1303030 MtrunA17_Chr8g0342861 26.571 350 214 10 45 387 59 372 9.06e-24 102
Msa1303030 MtrunA17_Chr7g0247191 24.810 395 260 11 24 416 146 505 1.08e-23 103
Msa1303030 MtrunA17_Chr7g0236831 25.107 466 250 14 10 400 138 579 1.45e-23 103
Msa1303030 MtrunA17_Chr8g0347151 28.032 371 211 14 41 388 215 552 1.67e-23 103
Msa1303030 MtrunA17_Chr2g0307471 27.324 355 227 11 38 387 102 430 6.60e-23 101
Msa1303030 MtrunA17_Chr4g0076491 26.396 394 225 13 37 400 297 655 1.99e-22 100
Msa1303030 MtrunA17_Chr6g0449741 26.615 387 219 13 39 396 261 611 2.71e-22 99.8
Msa1303030 MtrunA17_Chr7g0270131 28.173 394 233 16 35 416 237 592 6.07e-22 98.6
Msa1303030 MtrunA17_Chr2g0297261 24.665 373 230 12 26 387 33 365 6.74e-22 97.1
Msa1303030 MtrunA17_Chr2g0277821 25.926 405 231 13 27 408 504 862 1.08e-21 98.2
Msa1303030 MtrunA17_Chr2g0300291 27.887 355 216 12 42 387 156 479 1.42e-21 97.4
Msa1303030 MtrunA17_Chr7g0247221 23.971 413 275 12 6 416 123 498 1.75e-21 96.7
Msa1303030 MtrunA17_Chr3g0098121 28.371 356 212 14 42 387 167 489 1.90e-21 97.1
Msa1303030 MtrunA17_Chr7g0247181 23.971 413 275 12 6 416 120 495 1.91e-21 96.7
Msa1303030 MtrunA17_Chr4g0058591 28.308 325 198 9 40 358 215 510 6.15e-21 95.1
Msa1303030 MtrunA17_Chr5g0443991 25.429 350 225 10 46 387 95 416 1.74e-20 94.4
Msa1303030 MtrunA17_Chr8g0347161 26.016 369 221 14 41 388 116 453 2.21e-20 93.6
Msa1303030 MtrunA17_Chr8g0386451 25.272 368 217 14 45 388 306 639 4.53e-20 92.8
Msa1303030 MtrunA17_Chr4g0003441 23.274 391 248 9 45 423 126 476 5.11e-20 92.0
Msa1303030 MtrunA17_Chr5g0442191 28.283 396 225 13 13 387 60 417 8.79e-20 91.7
Msa1303030 MtrunA17_Chr3g0095031 29.630 351 195 14 51 387 114 426 1.16e-19 91.3
Msa1303030 MtrunA17_Chr6g0461751 25.905 359 229 9 37 387 150 479 1.59e-19 90.9
Msa1303030 MtrunA17_Chr8g0347171 24.523 367 227 11 41 387 174 510 4.60e-19 89.7
Msa1303030 MtrunA17_Chr7g0271121 26.542 373 230 9 27 387 104 444 6.08e-19 89.4
Msa1303030 MtrunA17_Chr3g0114081 24.309 362 245 6 39 387 28 373 7.25e-19 89.0
Msa1303030 MtrunA17_Chr4g0034411 25.287 348 227 11 46 387 95 415 1.72e-18 88.2
Msa1303030 MtrunA17_Chr3g0145781 24.282 383 231 11 36 387 141 495 2.21e-18 87.4
Msa1303030 MtrunA17_Chr6g0475251 25.495 404 250 14 27 415 102 469 2.31e-16 81.3
Msa1303030 MtrunA17_Chr1g0192021 22.980 396 235 10 49 399 48 418 5.84e-16 80.1
Msa1303030 MtrunA17_Chr1g0149251 24.731 372 218 13 65 417 2 330 8.52e-16 78.2
Msa1303030 MtrunA17_Chr1g0179761 26.648 364 213 17 36 380 90 418 2.62e-14 74.7
Msa1303030 MtrunA17_Chr1g0204391 24.869 382 223 11 37 387 54 402 2.65e-14 74.7
Msa1303030 MtrunA17_Chr4g0039471 29.204 226 128 8 9 221 202 408 2.35e-12 68.2
Msa1303030 MtrunA17_Chr8g0364251 26.776 183 117 6 211 387 356 527 1.01e-11 67.0
Msa1303030 MtrunA17_Chr8g0349951 32.667 150 90 5 35 182 18 158 3.94e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303030 AT5G19210.2 69.792 384 113 1 41 424 91 471 0.0 581
Msa1303030 AT5G19210.1 69.401 317 94 1 108 424 1 314 4.11e-168 474
Msa1303030 AT5G19210.3 69.401 317 94 1 108 424 1 314 4.11e-168 474
Msa1303030 AT1G12770.2 25.959 443 243 13 41 424 125 541 9.23e-32 127
Msa1303030 AT1G12770.1 25.959 443 243 13 41 424 125 541 9.23e-32 127
Msa1303030 AT3G58570.1 31.525 387 196 13 46 398 166 517 1.26e-30 124
Msa1303030 AT2G42520.2 31.978 369 188 13 46 387 179 511 5.02e-30 122
Msa1303030 AT2G42520.1 31.978 369 188 13 46 387 179 511 5.02e-30 122
Msa1303030 AT2G42520.3 31.978 369 188 13 46 387 179 511 5.02e-30 122
Msa1303030 AT3G58510.1 31.044 364 196 11 46 387 171 501 6.30e-30 122
Msa1303030 AT3G58510.3 31.044 364 196 11 46 387 171 501 6.30e-30 122
Msa1303030 AT3G58510.2 31.044 364 196 11 46 387 171 501 6.30e-30 122
Msa1303030 AT5G63120.2 28.767 365 224 11 29 387 169 503 3.73e-29 120
Msa1303030 AT5G60990.1 27.926 376 228 10 37 399 20 365 2.51e-28 116
Msa1303030 AT1G77030.1 27.684 354 217 11 41 387 43 364 1.38e-27 116
Msa1303030 AT3G01540.1 30.376 372 200 12 35 387 164 495 2.19e-27 115
Msa1303030 AT3G01540.4 30.376 372 200 12 35 387 164 495 2.25e-27 115
Msa1303030 AT3G01540.2 30.376 372 200 12 35 387 164 495 2.25e-27 115
Msa1303030 AT3G01540.3 30.376 372 200 12 35 387 164 495 2.25e-27 115
Msa1303030 AT1G20920.2 29.843 382 217 14 41 408 206 550 2.79e-27 115
Msa1303030 AT4G33370.1 27.960 397 233 14 2 387 87 441 5.88e-27 113
Msa1303030 AT1G72730.1 26.316 418 255 15 19 425 32 407 1.30e-26 111
Msa1303030 AT1G20920.4 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G20920.6 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G20920.3 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G20920.7 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G20920.5 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G20920.1 29.843 382 217 14 41 408 544 888 1.33e-26 113
Msa1303030 AT1G55150.2 28.375 363 220 11 35 387 130 462 3.49e-26 111
Msa1303030 AT1G55150.1 28.375 363 220 11 35 387 105 437 6.42e-26 110
Msa1303030 AT3G13920.4 25.490 408 250 14 30 425 35 400 1.01e-25 108
Msa1303030 AT5G65900.1 28.895 353 217 10 41 387 169 493 1.58e-25 109
Msa1303030 AT3G09720.2 25.419 358 226 11 36 387 151 473 2.21e-25 108
Msa1303030 AT3G09720.1 25.419 358 226 11 36 387 151 473 2.21e-25 108
Msa1303030 AT1G54270.2 26.108 406 244 14 33 425 38 400 2.39e-25 107
Msa1303030 AT3G13920.1 25.182 413 250 14 30 425 35 405 3.54e-25 107
Msa1303030 AT3G13920.3 24.755 408 258 12 30 425 25 395 4.28e-25 106
Msa1303030 AT4G00660.1 26.566 399 248 11 24 416 128 487 7.68e-25 107
Msa1303030 AT4G00660.2 26.566 399 248 11 24 416 128 487 7.68e-25 107
Msa1303030 AT1G54270.1 25.307 407 251 12 33 425 38 405 8.20e-25 105
Msa1303030 AT5G14610.1 28.378 370 223 11 27 387 230 566 1.14e-24 107
Msa1303030 AT5G51280.1 25.823 395 246 11 1 387 135 490 1.67e-24 106
Msa1303030 AT3G13920.2 24.427 393 252 10 30 411 35 393 2.07e-24 104
Msa1303030 AT3G13920.5 24.427 393 252 10 30 411 39 397 2.17e-24 104
Msa1303030 AT3G61240.2 24.882 422 275 12 6 425 105 486 3.68e-24 105
Msa1303030 AT3G61240.1 24.882 422 275 12 6 425 105 486 3.68e-24 105
Msa1303030 AT3G06480.1 27.479 353 214 8 44 387 453 772 3.93e-24 105
Msa1303030 AT4G09730.1 27.073 410 245 15 31 417 113 491 4.18e-24 105
Msa1303030 AT5G14610.7 28.571 350 214 10 44 387 48 367 4.96e-24 104
Msa1303030 AT5G14610.3 28.571 350 214 10 44 387 48 367 4.96e-24 104
Msa1303030 AT5G63630.1 26.757 370 221 13 39 388 67 406 5.75e-24 104
Msa1303030 AT2G40700.1 26.841 421 215 15 39 387 44 443 7.48e-24 104
Msa1303030 AT5G14610.5 28.926 363 211 13 38 387 178 506 1.06e-23 104
Msa1303030 AT5G63630.2 26.757 370 221 13 39 388 261 600 1.18e-23 104
Msa1303030 AT5G14610.6 28.926 363 211 13 38 387 170 498 1.50e-23 103
Msa1303030 AT1G16280.1 27.228 404 245 13 24 416 56 421 1.53e-23 103
Msa1303030 AT5G14610.2 28.926 363 211 13 38 387 170 498 1.60e-23 103
Msa1303030 AT3G18600.1 26.404 356 221 10 41 387 104 427 1.71e-23 103
Msa1303030 AT3G19760.1 25.424 354 217 11 43 387 52 367 3.47e-23 101
Msa1303030 AT2G45810.1 24.823 423 274 12 6 425 135 516 7.08e-23 101
Msa1303030 AT2G33730.1 27.481 393 218 12 35 396 322 678 8.07e-22 98.6
Msa1303030 AT2G47330.1 27.665 394 235 17 35 416 234 589 1.17e-21 98.2
Msa1303030 AT1G51380.1 26.136 352 217 10 43 387 39 354 2.13e-21 95.9
Msa1303030 AT1G71370.1 25.137 366 225 10 39 387 29 362 3.41e-21 96.3
Msa1303030 AT5G11170.1 26.142 394 233 14 45 423 65 415 8.28e-21 94.4
Msa1303030 AT5G11200.1 26.142 394 233 14 45 423 65 415 8.28e-21 94.4
Msa1303030 AT5G05450.1 24.324 370 210 10 50 387 40 371 9.75e-21 95.1
Msa1303030 AT5G08620.1 27.027 407 231 17 6 388 68 432 2.27e-20 94.0
Msa1303030 AT5G63120.3 27.679 336 207 11 29 358 169 474 4.03e-20 92.8
Msa1303030 AT5G63120.4 27.679 336 207 11 29 358 169 474 4.03e-20 92.8
Msa1303030 AT5G63120.5 27.679 336 207 11 29 358 169 474 4.03e-20 92.8
Msa1303030 AT5G63120.1 27.679 336 207 11 29 358 169 474 4.89e-20 92.4
Msa1303030 AT5G11200.3 25.476 420 244 16 45 423 65 456 8.49e-20 91.7
Msa1303030 AT3G16840.1 24.344 419 225 14 49 400 213 606 8.81e-20 92.4
Msa1303030 AT3G16840.2 24.344 419 225 14 49 400 214 607 9.57e-20 92.4
Msa1303030 AT5G08610.1 27.202 386 229 15 24 388 380 734 1.17e-19 92.0
Msa1303030 AT3G02065.3 26.331 357 223 10 41 387 125 451 2.02e-19 90.9
Msa1303030 AT3G02065.2 26.331 357 223 10 41 387 125 451 2.02e-19 90.9
Msa1303030 AT3G09620.1 28.075 374 189 15 41 400 411 718 2.29e-19 91.3
Msa1303030 AT3G09620.2 28.075 374 189 15 41 400 412 719 2.38e-19 91.3
Msa1303030 AT5G11200.2 24.256 437 246 13 45 423 65 474 2.53e-19 90.5
Msa1303030 AT2G07750.1 23.666 431 257 15 23 425 372 758 5.89e-19 90.1
Msa1303030 AT4G16630.1 28.090 356 213 13 42 387 183 505 8.58e-19 89.4
Msa1303030 AT1G63250.1 23.666 431 257 15 23 425 325 711 9.45e-19 89.4
Msa1303030 AT3G22330.1 26.554 354 202 10 51 387 129 441 4.20e-18 87.0
Msa1303030 AT5G54910.1 25.620 363 217 10 41 387 86 411 5.13e-18 87.0
Msa1303030 AT5G26742.1 25.341 367 222 11 37 387 113 443 8.39e-18 86.3
Msa1303030 AT5G26742.2 25.341 367 222 11 37 387 113 443 8.40e-18 86.3
Msa1303030 AT5G14610.4 27.405 343 204 12 38 368 178 487 2.30e-17 84.3
Msa1303030 AT3G06480.2 26.687 326 197 8 44 360 453 745 4.07e-17 84.3
Msa1303030 AT3G06980.1 24.665 373 239 12 37 387 385 737 1.26e-16 82.8
Msa1303030 AT5G11170.2 25.337 371 225 12 65 423 2 332 1.80e-16 80.9
Msa1303030 AT5G62190.1 27.621 391 226 15 27 397 96 449 7.37e-16 80.1
Msa1303030 AT1G71280.2 23.009 339 188 8 39 362 30 310 1.97e-15 77.4
Msa1303030 AT1G71280.1 23.032 343 191 8 39 366 30 314 2.72e-15 78.2
Msa1303030 AT1G28180.1 26.031 388 224 12 56 425 3 345 3.10e-15 77.4
Msa1303030 AT5G26742.3 25.364 343 204 11 61 387 44 350 3.34e-15 78.2
Msa1303030 AT4G34910.1 24.877 406 221 15 35 387 55 429 3.59e-14 75.1
Msa1303030 AT3G02065.1 25.507 345 213 11 55 387 2 314 3.89e-14 73.9
Msa1303030 AT3G53110.1 25.661 378 226 16 31 387 97 440 1.31e-12 69.7
Msa1303030 AT1G51380.2 25.806 248 162 7 43 287 39 267 6.02e-11 63.5

Find 114 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATATGTGAGTCATTTC+TGG 0.194191 8_3:-65765360 None:intergenic
GATGAGGCAAAGCTTGTTTC+TGG 0.205005 8_3:-65760745 None:intergenic
GAAATTGCCTTTGGAGTAAT+TGG 0.245034 8_3:-65760582 None:intergenic
TTTCTTATCTAGACAGGTTC+TGG 0.245869 8_3:+65761580 Msa1303030:intron
AAGGCACAAGAGTTGGTTTA+AGG 0.253619 8_3:+65761930 Msa1303030:CDS
CAGATCAAAGAAATAAAATA+AGG 0.258834 8_3:-65765638 None:intergenic
GTTAAAGCTCTCAATTTATA+TGG 0.260021 8_3:+65765687 Msa1303030:three_prime_UTR
AAAGTTGTCTTTCAAGCATT+TGG 0.274712 8_3:-65762750 None:intergenic
CGGATTGTATCAAGTATAAC+AGG 0.284982 8_3:-65763849 None:intergenic
GAAGGTCTAGGTGAGGTTTA+TGG 0.299819 8_3:-65765552 None:intergenic
CCACCGGACTAACGTGAATA+TGG 0.305745 8_3:-65763550 None:intergenic
ACCATCATGGCTTTGTTAGA+TGG 0.349677 8_3:+65761895 Msa1303030:CDS
ATTAGAGTTGAAATTGCCTT+TGG 0.357341 8_3:-65760591 None:intergenic
TTTGAGAAAGGAATGAATAA+TGG 0.366501 8_3:-65760616 None:intergenic
TTTCTTCAATTCAGGAGGTT+AGG 0.380425 8_3:+65765280 Msa1303030:intron
GCAGTCTGAGAAGTCGAAAA+AGG 0.395260 8_3:+65764573 Msa1303030:intron
ACGAAGCTGTGCAGCAGAAA+TGG 0.398801 8_3:+65763409 Msa1303030:CDS
AGTAACAGATACAGTATAGA+TGG 0.399989 8_3:+65760297 Msa1303030:five_prime_UTR
ACTGTTGCAACTACTATTGC+TGG 0.408826 8_3:-65762715 None:intergenic
TGAATTTGAAGATTGATAGT+AGG 0.408867 8_3:+65760264 Msa1303030:five_prime_UTR
TGCTCCCCTTCAACTCCTGT+TGG 0.415557 8_3:-65761862 None:intergenic
TGCTTGATGAAGATAATCTA+TGG 0.419150 8_3:-65765403 None:intergenic
CAATCCGATGCTCCCAAGTC+TGG 0.430922 8_3:+65763865 Msa1303030:CDS
AGTACAATTCACATCAGAAA+AGG 0.436765 8_3:-65765445 None:intergenic
TTTCAGATAAATACAATTTG+AGG 0.437886 8_3:-65765610 None:intergenic
TACCAAGGTTGCTAGGATAC+TGG 0.442206 8_3:+65761831 Msa1303030:CDS
AATATGAGGTCAAAATCTTC+CGG 0.442699 8_3:-65763320 None:intergenic
CATTATATTTGTTAGTGAGC+AGG 0.459913 8_3:+65763888 Msa1303030:CDS
TTGAAGATTGATAGTAGGAA+AGG 0.465479 8_3:+65760269 Msa1303030:five_prime_UTR
AATTGAAATAAATTTGAGAA+AGG 0.473686 8_3:-65760628 None:intergenic
CATTGAGAAGGCACAAGAGT+TGG 0.474974 8_3:+65761923 Msa1303030:CDS
ATGGTTAATGTTAGCGGAGA+AGG 0.479567 8_3:-65760455 None:intergenic
TGTTCGAACTGTATCATCTT+CGG 0.481379 8_3:-65760515 None:intergenic
TTACTTGCATGCCAAGTTCA+CGG 0.485189 8_3:-65761687 None:intergenic
TTCTTATCTAGACAGGTTCT+GGG 0.487069 8_3:+65761581 Msa1303030:intron
GGTTTCAGGATGGAAGAGGT+TGG 0.487259 8_3:+65760701 Msa1303030:intron
TTGGTGCCCACCCGTGAACT+TGG 0.487776 8_3:+65761676 Msa1303030:CDS
TACTTGCATGCCAAGTTCAC+GGG 0.491088 8_3:-65761686 None:intergenic
GCAAAGCCAACAGGAGTTGA+AGG 0.491708 8_3:+65761856 Msa1303030:CDS
GCTTGGAACCTTGCGGGTGT+TGG 0.493949 8_3:+65762777 Msa1303030:CDS
AACAAATATAATGCCAGACT+TGG 0.496013 8_3:-65763878 None:intergenic
AACTGTATCATCTTCGGTAG+TGG 0.497275 8_3:-65760509 None:intergenic
AGATCAAAGAAATAAAATAA+GGG 0.499268 8_3:-65765637 None:intergenic
ATACTGGCTGCAAAGCCAAC+AGG 0.501290 8_3:+65761847 Msa1303030:CDS
GTACAATTCACATCAGAAAA+GGG 0.505001 8_3:-65765444 None:intergenic
AGTAAAATATGTGAAGGTCT+AGG 0.506605 8_3:-65765564 None:intergenic
TGCCTTTGGAGTAATTGGTC+GGG 0.507382 8_3:-65760577 None:intergenic
ATAGATTATCTTCATCAAGC+AGG 0.508103 8_3:+65765405 Msa1303030:CDS
GCTTGTTTCTGGACCGGTGT+AGG 0.508652 8_3:-65760734 None:intergenic
GGCAAAGCTTGTTTCTGGAC+CGG 0.513600 8_3:-65760740 None:intergenic
GATCCATATTCACGTTAGTC+CGG 0.519341 8_3:+65763547 Msa1303030:CDS
CACCAGCATTATAGTCTCGC+AGG 0.522768 8_3:+65765470 Msa1303030:CDS
TCATGTCATCTTCGAGGAGG+AGG 0.523824 8_3:-65764666 None:intergenic
ATCAGAAAAGGGTTTCCTAC+AGG 0.525591 8_3:-65765433 None:intergenic
CGAGACGGCATGGGCTCCAC+CGG 0.526533 8_3:-65763566 None:intergenic
ATGAGATAGACGAGACGGCA+TGG 0.531411 8_3:-65763576 None:intergenic
TCCATCTAACAAAGCCATGA+TGG 0.537850 8_3:-65761896 None:intergenic
TTGCCTTTGGAGTAATTGGT+CGG 0.541519 8_3:-65760578 None:intergenic
TGAAATTCATGTCATCTTCG+AGG 0.542019 8_3:-65764672 None:intergenic
TCATCTTCGGTAGTGGCTAG+TGG 0.543604 8_3:-65760502 None:intergenic
CAAAGCAAGTGAGTTCTCTC+CGG 0.545982 8_3:+65763301 Msa1303030:CDS
AATGTTAGCGGAGAAGGAGG+AGG 0.546395 8_3:-65760449 None:intergenic
AATGCCAGACTTGGGAGCAT+CGG 0.548051 8_3:-65763869 None:intergenic
TTCACGAGCAGCTTCTCTGT+TGG 0.548108 8_3:+65764696 Msa1303030:CDS
TGACTGCATACTTCATGCTC+AGG 0.549288 8_3:+65760781 Msa1303030:CDS
ATATGGTTTCAGGATGGAAG+AGG 0.550760 8_3:+65760697 Msa1303030:intron
ACAAGGTTACCAAGGTTGCT+AGG 0.555693 8_3:+65761824 Msa1303030:intron
CTCCTGCGAGACTATAATGC+TGG 0.560387 8_3:-65765472 None:intergenic
GTTAATGTTAGCGGAGAAGG+AGG 0.563248 8_3:-65760452 None:intergenic
AAAGTCAATCACAAGGGACG+TGG 0.566234 8_3:-65764611 None:intergenic
GCGGGTGTTGGTTGTTGATG+AGG 0.566555 8_3:+65762789 Msa1303030:CDS
TGAGATAGACGAGACGGCAT+GGG 0.566865 8_3:-65763575 None:intergenic
ATTCAGGAGGTTAGGAAAGG+TGG 0.567056 8_3:+65765288 Msa1303030:intron
GATGAAGAAAGAAAACGAAG+AGG 0.568181 8_3:-65760355 None:intergenic
TCAATTCAGGAGGTTAGGAA+AGG 0.571959 8_3:+65765285 Msa1303030:intron
GTGCTGTGGTATAGATGCAC+TGG 0.576066 8_3:-65763373 None:intergenic
TTGCATGCCAAGTTCACGGG+TGG 0.578362 8_3:-65761683 None:intergenic
CAAAGCCAACAGGAGTTGAA+GGG 0.578993 8_3:+65761857 Msa1303030:CDS
TGTGCAGCAGAAATGGACTA+AGG 0.582058 8_3:+65763416 Msa1303030:CDS
AGCCAGTATCCTAGCAACCT+TGG 0.595049 8_3:-65761833 None:intergenic
GCAAAGATCATGTACCATCA+TGG 0.597463 8_3:+65761882 Msa1303030:CDS
ACAAATATAATGCCAGACTT+GGG 0.600019 8_3:-65763877 None:intergenic
GCATTATAGTCTCGCAGGAG+CGG 0.601083 8_3:+65765475 Msa1303030:CDS
ATCATGGCTTTGTTAGATGG+AGG 0.601394 8_3:+65761898 Msa1303030:CDS
ACGGTGATGGTTAATGTTAG+CGG 0.601515 8_3:-65760461 None:intergenic
TCAATCACAAGGGACGTGGA+TGG 0.602588 8_3:-65764607 None:intergenic
CCATATTCACGTTAGTCCGG+TGG 0.603339 8_3:+65763550 Msa1303030:CDS
GATCAGAGTAAAATATGTGA+AGG 0.606192 8_3:-65765570 None:intergenic
ATTTAATGACAAGGTTACCA+AGG 0.606643 8_3:+65761816 Msa1303030:intron
TTGTTGTTGTGACACGGTGA+TGG 0.610062 8_3:-65760474 None:intergenic
TTCCCGACCAATTACTCCAA+AGG 0.611672 8_3:+65760575 Msa1303030:CDS
GAGCATGAAGTATGCAGTCA+CGG 0.611830 8_3:-65760778 None:intergenic
TAGATTATCTTCATCAAGCA+GGG 0.613532 8_3:+65765406 Msa1303030:CDS
GTTATTACAAGACGAATATG+AGG 0.618006 8_3:-65763334 None:intergenic
CAGGAGGTTAGGAAAGGTGG+CGG 0.618785 8_3:+65765291 Msa1303030:intron
GAGTTGTTGTTGTTGTGACA+CGG 0.620368 8_3:-65760480 None:intergenic
CATAATTGTCTGAGAGTGGT+GGG 0.620433 8_3:-65760541 None:intergenic
GCAACAGATGTAGCAGCTAG+AGG 0.629003 8_3:+65765327 Msa1303030:CDS
ATCAAGCAGGGAGGACCTGT+AGG 0.629511 8_3:+65765418 Msa1303030:CDS
TGGATATGTCATGCCTACAC+CGG 0.638270 8_3:+65760721 Msa1303030:CDS
AGAGATATGAAAATGAGTTG+AGG 0.645209 8_3:+65765508 Msa1303030:CDS
TTAAGAAATCGATTGTGCTG+TGG 0.645279 8_3:-65763387 None:intergenic
TAGATGGAGGAACATTGAGA+AGG 0.646333 8_3:+65761911 Msa1303030:CDS
ATCAACAACCAACACCCGCA+AGG 0.646378 8_3:-65762785 None:intergenic
TGCATGCCAAGTTCACGGGT+GGG 0.647137 8_3:-65761682 None:intergenic
ACATAATTGTCTGAGAGTGG+TGG 0.647192 8_3:-65760542 None:intergenic
AATCTATGAGATAGACGAGA+CGG 0.648321 8_3:-65763581 None:intergenic
AAAGCCAACAGGAGTTGAAG+GGG 0.649551 8_3:+65761858 Msa1303030:CDS
AATATGTGAAGGTCTAGGTG+AGG 0.663605 8_3:-65765559 None:intergenic
TTGACATAATTGTCTGAGAG+TGG 0.663852 8_3:-65760545 None:intergenic
GTTGCAACTACTATTGCTGG+AGG 0.676385 8_3:-65762712 None:intergenic
AATTCATGTCATCTTCGAGG+AGG 0.678357 8_3:-65764669 None:intergenic
GGATTGTATCAAGTATAACA+GGG 0.706504 8_3:-65763848 None:intergenic
ATTATCTTCATCAAGCAGGG+AGG 0.725433 8_3:+65765409 Msa1303030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATAAAAACAAATATTTTT+GGG - chr8_3:65761029-65761048 None:intergenic 10.0%
!! AAAAAATATATTTAATGACA+AGG + chr8_3:65761807-65761826 Msa1303030:intron 10.0%
!! AATTGAAATAAATTTGAGAA+AGG - chr8_3:65760631-65760650 None:intergenic 15.0%
!!! CACATAAAAACAAATATTTT+TGG - chr8_3:65761030-65761049 None:intergenic 15.0%
!!! AAATATTTGTTTTTATGTGA+TGG + chr8_3:65761031-65761050 Msa1303030:intron 15.0%
!! TCTAGATAAGAAATAAAATA+AGG - chr8_3:65761573-65761592 None:intergenic 15.0%
!! TATTTATAATCAAATAGATG+TGG + chr8_3:65761996-65762015 Msa1303030:intron 15.0%
!!! TTTTAAGTCTTATATTTCAT+TGG + chr8_3:65762397-65762416 Msa1303030:intron 15.0%
!! AAATATAAAAATATAAAGCC+TGG + chr8_3:65763165-65763184 Msa1303030:intron 15.0%
!! AGATCAAAGAAATAAAATAA+GGG - chr8_3:65765640-65765659 None:intergenic 15.0%
!!! TTCATTTCTTATTTGATATG+TGG + chr8_3:65760862-65760881 Msa1303030:intron 20.0%
!! AAAAACTATTAGCAAAGATT+TGG + chr8_3:65761259-65761278 Msa1303030:intron 20.0%
!! TCTATCATAAACCATATTTA+GGG - chr8_3:65761300-65761319 None:intergenic 20.0%
!! TTCTATCATAAACCATATTT+AGG - chr8_3:65761301-65761320 None:intergenic 20.0%
!!! TTGTTGAAATCATTTTAGAT+AGG + chr8_3:65761386-65761405 Msa1303030:intron 20.0%
!!! ATTTTATTTCTTATCTAGAC+AGG + chr8_3:65761574-65761593 Msa1303030:intron 20.0%
!!! AGATTTTCTTGTGTTAATAA+TGG - chr8_3:65761638-65761657 None:intergenic 20.0%
!! AAGCAATTATAGAAAGATAA+TGG - chr8_3:65762950-65762969 None:intergenic 20.0%
!! TATGCTAAATAACACTATTA+AGG - chr8_3:65763067-65763086 None:intergenic 20.0%
!! ATATAGAATGGTTTAAACTT+GGG + chr8_3:65763731-65763750 Msa1303030:intron 20.0%
!!! TATTCAATTTTTCAATCATC+AGG + chr8_3:65763798-65763817 Msa1303030:intron 20.0%
!! ATTAATTACGAAAAAGCTAA+TGG - chr8_3:65764129-65764148 None:intergenic 20.0%
!! ATAACTTTATCATATTACCT+GGG - chr8_3:65764524-65764543 None:intergenic 20.0%
!!! TTTCTAAAAACATCATATCA+TGG + chr8_3:65764631-65764650 Msa1303030:CDS 20.0%
!! ATCCATATCAATCAATTAAA+TGG - chr8_3:65764728-65764747 None:intergenic 20.0%
!! TTTAATTGATTGATATGGAT+TGG + chr8_3:65764728-65764747 Msa1303030:intron 20.0%
!! TAGACTGAAACAATATAATT+TGG - chr8_3:65764919-65764938 None:intergenic 20.0%
!! TTTCAGATAAATACAATTTG+AGG - chr8_3:65765613-65765632 None:intergenic 20.0%
!! CAGATCAAAGAAATAAAATA+AGG - chr8_3:65765641-65765660 None:intergenic 20.0%
!! TGAATTTGAAGATTGATAGT+AGG + chr8_3:65760264-65760283 Msa1303030:five_prime_UTR 25.0%
! TTTGAGAAAGGAATGAATAA+TGG - chr8_3:65760619-65760638 None:intergenic 25.0%
!! TGCTTTATCGTTTTACAATA+TGG + chr8_3:65760680-65760699 Msa1303030:intron 25.0%
!! TTCAACATACAAGTTTTCAA+AGG + chr8_3:65760981-65761000 Msa1303030:intron 25.0%
!!! TATTTGTTTTTATGTGATGG+TGG + chr8_3:65761034-65761053 Msa1303030:intron 25.0%
!! ATGGTTGAAATCATTTTATG+AGG + chr8_3:65761169-65761188 Msa1303030:intron 25.0%
!! TCTTTGCTAATAGTTTTTCT+AGG - chr8_3:65761257-65761276 None:intergenic 25.0%
! AGATTTGGAAATTAATGAGT+TGG + chr8_3:65761274-65761293 Msa1303030:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr8_3:65761306-65761325 Msa1303030:intron 25.0%
!!! ATTTTAGATAGGCACTTTTT+TGG + chr8_3:65761397-65761416 Msa1303030:intron 25.0%
!!! TTTTAGATAGGCACTTTTTT+GGG + chr8_3:65761398-65761417 Msa1303030:intron 25.0%
!! CTTCAATGAGTTGTATTTTA+TGG + chr8_3:65761973-65761992 Msa1303030:intron 25.0%
! GTTTCGATACAATTATTTAC+TGG + chr8_3:65762304-65762323 Msa1303030:intron 25.0%
! TTATAAGTTTGTGATGCATA+TGG + chr8_3:65762427-65762446 Msa1303030:intron 25.0%
!! GTTTTGTGTATTTGATATGT+TGG + chr8_3:65762507-65762526 Msa1303030:intron 25.0%
!! GATCAACTTTCTTCAATTTT+AGG + chr8_3:65762684-65762703 Msa1303030:intron 25.0%
!! CTTTTTATTCTTATCTGCTT+AGG + chr8_3:65763257-65763276 Msa1303030:intron 25.0%
!!! TGTTGGTCTTTTTTTTTACA+TGG + chr8_3:65763466-65763485 Msa1303030:intron 25.0%
! AAACAGTCAGAATGAATTTA+AGG - chr8_3:65763508-65763527 None:intergenic 25.0%
! GTTACAAGTGCATTAAAAAA+AGG - chr8_3:65763680-65763699 None:intergenic 25.0%
! GATATAGAATGGTTTAAACT+TGG + chr8_3:65763730-65763749 Msa1303030:intron 25.0%
! TTGATGAGTAATCAAATTGA+AGG - chr8_3:65763946-65763965 None:intergenic 25.0%
! CAATTTGATTACTCATCAAT+TGG + chr8_3:65763947-65763966 Msa1303030:intron 25.0%
! CACAAAATAACACTATAACA+TGG - chr8_3:65764184-65764203 None:intergenic 25.0%
!! AACCTCTTTTGTAAAAAACA+GGG + chr8_3:65764262-65764281 Msa1303030:intron 25.0%
! TATACTATTTGCTTGAAATG+AGG - chr8_3:65764409-65764428 None:intergenic 25.0%
! TCATTTCAAGCAAATAGTAT+AGG + chr8_3:65764408-65764427 Msa1303030:intron 25.0%
! GATAACTTTATCATATTACC+TGG - chr8_3:65764525-65764544 None:intergenic 25.0%
!!! TTTTAGAAAGTCAATCACAA+GGG - chr8_3:65764620-65764639 None:intergenic 25.0%
!!! TTTTTAGAAAGTCAATCACA+AGG - chr8_3:65764621-65764640 None:intergenic 25.0%
!! TGCCATTTAATTGATTGATA+TGG + chr8_3:65764723-65764742 Msa1303030:intron 25.0%
! ACATGAAAATCAATAATGCA+AGG - chr8_3:65764787-65764806 None:intergenic 25.0%
!!! TTGCATTATTGATTTTCATG+TGG + chr8_3:65764786-65764805 Msa1303030:intron 25.0%
! GATTAATGGCAAAATGAATT+TGG - chr8_3:65764816-65764835 None:intergenic 25.0%
! ATACAAGTCAAACTCTTATT+TGG + chr8_3:65764889-65764908 Msa1303030:intron 25.0%
! AATCTTTGATATTGTTTCCT+TGG + chr8_3:65764987-65765006 Msa1303030:intron 25.0%
!! GAACATTTAGTTCAAAAGTT+GGG + chr8_3:65765063-65765082 Msa1303030:intron 25.0%
!!! CTTAATATGCATTTTGATGA+GGG - chr8_3:65765145-65765164 None:intergenic 25.0%
! GTTAAAGCTCTCAATTTATA+TGG + chr8_3:65765687-65765706 Msa1303030:three_prime_UTR 25.0%
! TTGAAGATTGATAGTAGGAA+AGG + chr8_3:65760269-65760288 Msa1303030:five_prime_UTR 30.0%
AGTAACAGATACAGTATAGA+TGG + chr8_3:65760297-65760316 Msa1303030:five_prime_UTR 30.0%
ATGAAGAAGAAGAAGAAGTT+GGG - chr8_3:65760387-65760406 None:intergenic 30.0%
TATGAAGAAGAAGAAGAAGT+TGG - chr8_3:65760388-65760407 None:intergenic 30.0%
ATTAGAGTTGAAATTGCCTT+TGG - chr8_3:65760594-65760613 None:intergenic 30.0%
! TCGTTTTACAATATGGTTTC+AGG + chr8_3:65760687-65760706 Msa1303030:intron 30.0%
TTTACAATATGGTTTCAGGA+TGG + chr8_3:65760691-65760710 Msa1303030:intron 30.0%
CTTCATTAATAGTTGCAGAA+TGG - chr8_3:65761091-65761110 None:intergenic 30.0%
! TTTATGAGGATTTTGTAGCA+AGG + chr8_3:65761183-65761202 Msa1303030:intron 30.0%
!! TTGTTATTTCATGGATGGAT+CGG - chr8_3:65761535-65761554 None:intergenic 30.0%
TCCATCCATGAAATAACAAA+AGG + chr8_3:65761536-65761555 Msa1303030:intron 30.0%
CCATCCATGAAATAACAAAA+GGG + chr8_3:65761537-65761556 Msa1303030:intron 30.0%
!!! ATCTCCCTTTTGTTATTTCA+TGG - chr8_3:65761544-65761563 None:intergenic 30.0%
ATGAAATAACAAAAGGGAGA+TGG + chr8_3:65761543-65761562 Msa1303030:intron 30.0%
!! TTCTTTTCAAGCACTAGTTT+TGG + chr8_3:65761657-65761676 Msa1303030:CDS 30.0%
ATCTTTGATGCAACATATCA+AGG + chr8_3:65761750-65761769 Msa1303030:intron 30.0%
TCTTTGATGCAACATATCAA+GGG + chr8_3:65761751-65761770 Msa1303030:intron 30.0%
ATTTAATGACAAGGTTACCA+AGG + chr8_3:65761816-65761835 Msa1303030:intron 30.0%
CAATTATTATCAGTGAGATG+TGG - chr8_3:65762188-65762207 None:intergenic 30.0%
CTATTGCAGCATAAAAAGAA+AGG - chr8_3:65762260-65762279 None:intergenic 30.0%
GGTACTTATATACCACAATT+TGG - chr8_3:65762362-65762381 None:intergenic 30.0%
TTTGTGATGCATATGGTTAA+TGG + chr8_3:65762434-65762453 Msa1303030:intron 30.0%
AAATACACAAAACACACACA+AGG - chr8_3:65762500-65762519 None:intergenic 30.0%
! CAGAGCTATTATATAGCTTT+TGG - chr8_3:65762560-65762579 None:intergenic 30.0%
ATAAAAAGCAACGTTAACAG+AGG - chr8_3:65762594-65762613 None:intergenic 30.0%
AAAGTTGTCTTTCAAGCATT+TGG - chr8_3:65762753-65762772 None:intergenic 30.0%
!! ATTGTATACTTGTGCTGTTT+AGG + chr8_3:65762849-65762868 Msa1303030:intron 30.0%
!! TTGTATACTTGTGCTGTTTA+GGG + chr8_3:65762850-65762869 Msa1303030:intron 30.0%
TTTAGCTACATTAGATCACA+TGG - chr8_3:65763017-65763036 None:intergenic 30.0%
CTCAACACAAAATTTCCAAA+AGG - chr8_3:65763140-65763159 None:intergenic 30.0%
AGGGAACTAAAAAAGAAGTT+GGG - chr8_3:65763210-65763229 None:intergenic 30.0%
AAGGGAACTAAAAAAGAAGT+TGG - chr8_3:65763211-65763230 None:intergenic 30.0%
GTACTTACAAAATTGCTCAA+GGG - chr8_3:65763229-65763248 None:intergenic 30.0%
AGTACTTACAAAATTGCTCA+AGG - chr8_3:65763230-65763249 None:intergenic 30.0%
AATATGAGGTCAAAATCTTC+CGG - chr8_3:65763323-65763342 None:intergenic 30.0%
GTTATTACAAGACGAATATG+AGG - chr8_3:65763337-65763356 None:intergenic 30.0%
TGATTCGTCTGATTATTTGT+TGG + chr8_3:65763449-65763468 Msa1303030:intron 30.0%
TATATCTTTCCAAGGTCAAA+GGG - chr8_3:65763716-65763735 None:intergenic 30.0%
AACCATTCTATATCTTTCCA+AGG - chr8_3:65763724-65763743 None:intergenic 30.0%
TCTCTTATAAATACCCATGT+TGG + chr8_3:65763754-65763773 Msa1303030:intron 30.0%
CTCTTATAAATACCCATGTT+GGG + chr8_3:65763755-65763774 Msa1303030:intron 30.0%
AATTTACTAATGCCCAACAT+GGG - chr8_3:65763770-65763789 None:intergenic 30.0%
AAATTTACTAATGCCCAACA+TGG - chr8_3:65763771-65763790 None:intergenic 30.0%
GGATTGTATCAAGTATAACA+GGG - chr8_3:65763851-65763870 None:intergenic 30.0%
ACAAATATAATGCCAGACTT+GGG - chr8_3:65763880-65763899 None:intergenic 30.0%
AACAAATATAATGCCAGACT+TGG - chr8_3:65763881-65763900 None:intergenic 30.0%
! CATTATATTTGTTAGTGAGC+AGG + chr8_3:65763888-65763907 Msa1303030:CDS 30.0%
ATGAGTAATCAAATTGAAGG+AGG - chr8_3:65763943-65763962 None:intergenic 30.0%
!!! TAGTGTTATTTTGTGCTCAA+CGG + chr8_3:65764189-65764208 Msa1303030:intron 30.0%
! GAACCTCTTTTGTAAAAAAC+AGG + chr8_3:65764261-65764280 Msa1303030:intron 30.0%
!!! TACCCTGTTTTTTACAAAAG+AGG - chr8_3:65764267-65764286 None:intergenic 30.0%
! CTTTTGTAAAAAACAGGGTA+AGG + chr8_3:65764267-65764286 Msa1303030:intron 30.0%
GGTTACTACAATATACCAAA+CGG + chr8_3:65764288-65764307 Msa1303030:intron 30.0%
! GTTTGGGGTAATAATTTCAA+TGG - chr8_3:65764473-65764492 None:intergenic 30.0%
CAAGGATACTAGAAAATTAG+AGG - chr8_3:65764769-65764788 None:intergenic 30.0%
AATGGCAAAATGAATTTGGA+TGG - chr8_3:65764812-65764831 None:intergenic 30.0%
! TTCATTTTGCCATTAATCCA+TGG + chr8_3:65764818-65764837 Msa1303030:intron 30.0%
! TCATTTTGCCATTAATCCAT+GGG + chr8_3:65764819-65764838 Msa1303030:intron 30.0%
! ATTATTCACCCATGGATTAA+TGG - chr8_3:65764830-65764849 None:intergenic 30.0%
TGTATTAGATTATTCACCCA+TGG - chr8_3:65764838-65764857 None:intergenic 30.0%
! GGAACATTTAGTTCAAAAGT+TGG + chr8_3:65765062-65765081 Msa1303030:intron 30.0%
!! GCTTAATATGCATTTTGATG+AGG - chr8_3:65765146-65765165 None:intergenic 30.0%
! ACCATAAGTATGCTAGTTTA+AGG + chr8_3:65765177-65765196 Msa1303030:intron 30.0%
TCCTTAAACTAGCATACTTA+TGG - chr8_3:65765181-65765200 None:intergenic 30.0%
! TAAGTATGCTAGTTTAAGGA+TGG + chr8_3:65765181-65765200 Msa1303030:intron 30.0%
!! AAATGCTGTTTCTTCAATTC+AGG + chr8_3:65765212-65765231 Msa1303030:intron 30.0%
! GTAATGACTAGTGTTGAAAA+GGG + chr8_3:65765237-65765256 Msa1303030:intron 30.0%
TTGTATATGTGAGTCATTTC+TGG - chr8_3:65765363-65765382 None:intergenic 30.0%
! AGATAATCTATGGCAGTTTT+TGG - chr8_3:65765396-65765415 None:intergenic 30.0%
TGCTTGATGAAGATAATCTA+TGG - chr8_3:65765406-65765425 None:intergenic 30.0%
ATAGATTATCTTCATCAAGC+AGG + chr8_3:65765405-65765424 Msa1303030:CDS 30.0%
TAGATTATCTTCATCAAGCA+GGG + chr8_3:65765406-65765425 Msa1303030:CDS 30.0%
GTACAATTCACATCAGAAAA+GGG - chr8_3:65765447-65765466 None:intergenic 30.0%
AGTACAATTCACATCAGAAA+AGG - chr8_3:65765448-65765467 None:intergenic 30.0%
AGAGATATGAAAATGAGTTG+AGG + chr8_3:65765508-65765527 Msa1303030:CDS 30.0%
AGTAAAATATGTGAAGGTCT+AGG - chr8_3:65765567-65765586 None:intergenic 30.0%
GATCAGAGTAAAATATGTGA+AGG - chr8_3:65765573-65765592 None:intergenic 30.0%
GATGAAGAAAGAAAACGAAG+AGG - chr8_3:65760358-65760377 None:intergenic 35.0%
TGTTCGAACTGTATCATCTT+CGG - chr8_3:65760518-65760537 None:intergenic 35.0%
TTGACATAATTGTCTGAGAG+TGG - chr8_3:65760548-65760567 None:intergenic 35.0%
!! GAAATTGCCTTTGGAGTAAT+TGG - chr8_3:65760585-65760604 None:intergenic 35.0%
ATGAGACAGAAGAACAACTT+AGG + chr8_3:65760916-65760935 Msa1303030:intron 35.0%
ACAGAAGAACAACTTAGGTT+GGG + chr8_3:65760921-65760940 Msa1303030:intron 35.0%
ATGAAGCTCTGTCATTATGA+AGG + chr8_3:65761105-65761124 Msa1303030:intron 35.0%
! GTGGAATTGTAATTTTGTGC+AGG - chr8_3:65761134-65761153 None:intergenic 35.0%
CCATATAAAATCTGAGTCAG+TGG - chr8_3:65761153-65761172 None:intergenic 35.0%
!!! CCACTGACTCAGATTTTATA+TGG + chr8_3:65761150-65761169 Msa1303030:intron 35.0%
! TAATGAGTTGGCCCTAAATA+TGG + chr8_3:65761286-65761305 Msa1303030:intron 35.0%
TTGTATCATGTGCAGAAGAA+AGG - chr8_3:65761432-65761451 None:intergenic 35.0%
GTATATCCTACCATGTTGTT+CGG + chr8_3:65761483-65761502 Msa1303030:intron 35.0%
TATATCCTACCATGTTGTTC+GGG + chr8_3:65761484-65761503 Msa1303030:intron 35.0%
!! TGTTATTTCATGGATGGATC+GGG - chr8_3:65761534-65761553 None:intergenic 35.0%
!!! CCCTTTTGTTATTTCATGGA+TGG - chr8_3:65761540-65761559 None:intergenic 35.0%
TTTCTTATCTAGACAGGTTC+TGG + chr8_3:65761580-65761599 Msa1303030:intron 35.0%
TTCTTATCTAGACAGGTTCT+GGG + chr8_3:65761581-65761600 Msa1303030:intron 35.0%
CTTTGATGCAACATATCAAG+GGG + chr8_3:65761752-65761771 Msa1303030:intron 35.0%
TAGATGTGGTGACTAACAAA+TGG + chr8_3:65762010-65762029 Msa1303030:intron 35.0%
CTCGAATGTCAATCAAGTTT+AGG + chr8_3:65762227-65762246 Msa1303030:intron 35.0%
TGTATCGAAACAAACACAAC+AGG - chr8_3:65762295-65762314 None:intergenic 35.0%
ATATACCACAATTTGGCCAA+CGG - chr8_3:65762355-65762374 None:intergenic 35.0%
GTATATAAGTACCATGCTCT+TGG + chr8_3:65762369-65762388 Msa1303030:intron 35.0%
TGATGCATATGGTTAATGGA+TGG + chr8_3:65762438-65762457 Msa1303030:intron 35.0%
! GATGCATATGGTTAATGGAT+GGG + chr8_3:65762439-65762458 Msa1303030:intron 35.0%
! ATGCATATGGTTAATGGATG+GGG + chr8_3:65762440-65762459 Msa1303030:intron 35.0%
TTGATATGTTGGACCTATGT+TGG + chr8_3:65762518-65762537 Msa1303030:intron 35.0%
TGATATGTTGGACCTATGTT+GGG + chr8_3:65762519-65762538 Msa1303030:intron 35.0%
TTCAAACCATTTCCCAACAT+AGG - chr8_3:65762534-65762553 None:intergenic 35.0%
!!! GAAAGACAACTTTTTTCGCT+TGG + chr8_3:65762760-65762779 Msa1303030:CDS 35.0%
TTCTCTTCGCATTTGAATTG+TGG + chr8_3:65762820-65762839 Msa1303030:intron 35.0%
TCACATGGATAGATGAGAAT+GGG - chr8_3:65763002-65763021 None:intergenic 35.0%
ATCACATGGATAGATGAGAA+TGG - chr8_3:65763003-65763022 None:intergenic 35.0%
ATTTCCACATTTCCATGAGT+CGG + chr8_3:65763099-65763118 Msa1303030:intron 35.0%
! AAGGGGTTTTTCATACCTTT+TGG + chr8_3:65763122-65763141 Msa1303030:intron 35.0%
AAAAAAGAAGTTGGGAGACA+GGG - chr8_3:65763202-65763221 None:intergenic 35.0%
TAAAAAAGAAGTTGGGAGAC+AGG - chr8_3:65763203-65763222 None:intergenic 35.0%
TTAAGAAATCGATTGTGCTG+TGG - chr8_3:65763390-65763409 None:intergenic 35.0%
AATCTATGAGATAGACGAGA+CGG - chr8_3:65763584-65763603 None:intergenic 35.0%
CTATATCTTTCCAAGGTCAA+AGG - chr8_3:65763717-65763736 None:intergenic 35.0%
GACCTTGGAAAGATATAGAA+TGG + chr8_3:65763719-65763738 Msa1303030:intron 35.0%
CGGATTGTATCAAGTATAAC+AGG - chr8_3:65763852-65763871 None:intergenic 35.0%
AGTAATCAAATTGAAGGAGG+AGG - chr8_3:65763940-65763959 None:intergenic 35.0%
TTACAAAAGAGGTTCTTTCC+AGG - chr8_3:65764256-65764275 None:intergenic 35.0%
ACTACAATATACCAAACGGT+AGG + chr8_3:65764292-65764311 Msa1303030:intron 35.0%
ATTAACTCCCAAGCATCTAA+TGG - chr8_3:65764372-65764391 None:intergenic 35.0%
CAAGCAAATAGTATAGGACT+TGG + chr8_3:65764414-65764433 Msa1303030:intron 35.0%
ACATTAAATGCACACGTTTG+GGG - chr8_3:65764488-65764507 None:intergenic 35.0%
GACATTAAATGCACACGTTT+GGG - chr8_3:65764489-65764508 None:intergenic 35.0%
AGACATTAAATGCACACGTT+TGG - chr8_3:65764490-65764509 None:intergenic 35.0%
TGAAATTCATGTCATCTTCG+AGG - chr8_3:65764675-65764694 None:intergenic 35.0%
CTTTGATATTGTTTCCTTGG+AGG + chr8_3:65764990-65765009 Msa1303030:intron 35.0%
AGAACGATGTTTATCCTCAA+GGG + chr8_3:65765041-65765060 Msa1303030:intron 35.0%
TTGAACTAAATGTTCCCTTG+AGG - chr8_3:65765058-65765077 None:intergenic 35.0%
TTCAAAAGTTGGGATGTCTT+TGG + chr8_3:65765073-65765092 Msa1303030:intron 35.0%
AATGCATATTAAGCCTAGTG+CGG + chr8_3:65765152-65765171 Msa1303030:intron 35.0%
! GGTAATGACTAGTGTTGAAA+AGG + chr8_3:65765236-65765255 Msa1303030:intron 35.0%
!! GTTTGCTGTTTCTTCAATTC+AGG + chr8_3:65765272-65765291 Msa1303030:intron 35.0%
TTTCTTCAATTCAGGAGGTT+AGG + chr8_3:65765280-65765299 Msa1303030:intron 35.0%
ATGGTTAATGTTAGCGGAGA+AGG - chr8_3:65760458-65760477 None:intergenic 40.0%
! ACGGTGATGGTTAATGTTAG+CGG - chr8_3:65760464-65760483 None:intergenic 40.0%
! GAGTTGTTGTTGTTGTGACA+CGG - chr8_3:65760483-65760502 None:intergenic 40.0%
AACTGTATCATCTTCGGTAG+TGG - chr8_3:65760512-65760531 None:intergenic 40.0%
CATAATTGTCTGAGAGTGGT+GGG - chr8_3:65760544-65760563 None:intergenic 40.0%
ACATAATTGTCTGAGAGTGG+TGG - chr8_3:65760545-65760564 None:intergenic 40.0%
!! TTGCCTTTGGAGTAATTGGT+CGG - chr8_3:65760581-65760600 None:intergenic 40.0%
ATATGGTTTCAGGATGGAAG+AGG + chr8_3:65760697-65760716 Msa1303030:intron 40.0%
!!! GCTTTGCCTCATCTTTTTTC+TGG + chr8_3:65760755-65760774 Msa1303030:CDS 40.0%
! GTTCATTGCTGTTGTTGTTG+TGG + chr8_3:65760803-65760822 Msa1303030:intron 40.0%
GACAGAAGAACAACTTAGGT+TGG + chr8_3:65760920-65760939 Msa1303030:intron 40.0%
!! AAGAACAACTTAGGTTGGGA+GGG + chr8_3:65760925-65760944 Msa1303030:intron 40.0%
AACTAGACATGGTCCCATTA+CGG - chr8_3:65761066-65761085 None:intergenic 40.0%
GCAGAATGGAAAACTAGACA+TGG - chr8_3:65761077-65761096 None:intergenic 40.0%
AAGCTCTGTCATTATGAAGG+TGG + chr8_3:65761108-65761127 Msa1303030:intron 40.0%
! AAGCCTTATCCCACTAATTG+GGG - chr8_3:65761355-65761374 None:intergenic 40.0%
! CAAGCCTTATCCCACTAATT+GGG - chr8_3:65761356-65761375 None:intergenic 40.0%
ATCATGTGCAGAAGAAAGGA+AGG - chr8_3:65761428-65761447 None:intergenic 40.0%
! GTTATTTCATGGATGGATCG+GGG - chr8_3:65761533-65761552 None:intergenic 40.0%
TTACTTGCATGCCAAGTTCA+CGG - chr8_3:65761690-65761709 None:intergenic 40.0%
! CAGTCATTTGCCTTTTCCAA+GGG - chr8_3:65761782-65761801 None:intergenic 40.0%
! TCAGTCATTTGCCTTTTCCA+AGG - chr8_3:65761783-65761802 None:intergenic 40.0%
GCAAAGATCATGTACCATCA+TGG + chr8_3:65761882-65761901 Msa1303030:CDS 40.0%
!! ACCATCATGGCTTTGTTAGA+TGG + chr8_3:65761895-65761914 Msa1303030:CDS 40.0%
TCCATCTAACAAAGCCATGA+TGG - chr8_3:65761899-65761918 None:intergenic 40.0%
!! ATCATGGCTTTGTTAGATGG+AGG + chr8_3:65761898-65761917 Msa1303030:CDS 40.0%
TAGATGGAGGAACATTGAGA+AGG + chr8_3:65761911-65761930 Msa1303030:CDS 40.0%
! AAGGCACAAGAGTTGGTTTA+AGG + chr8_3:65761930-65761949 Msa1303030:CDS 40.0%
TCCATTGCAATTGCATTGCA+CGG - chr8_3:65762039-65762058 None:intergenic 40.0%
TTAACTTTACATCTCGCCGT+TGG + chr8_3:65762336-65762355 Msa1303030:intron 40.0%
TATAAGTACCATGCTCTTGG+AGG + chr8_3:65762372-65762391 Msa1303030:intron 40.0%
TTAAAACACCTCCAAGAGCA+TGG - chr8_3:65762383-65762402 None:intergenic 40.0%
! TGCATATGGTTAATGGATGG+GGG + chr8_3:65762441-65762460 Msa1303030:intron 40.0%
AAAAGCAACGTTAACAGAGG+TGG - chr8_3:65762591-65762610 None:intergenic 40.0%
ACTGTTGCAACTACTATTGC+TGG - chr8_3:65762718-65762737 None:intergenic 40.0%
!!! TTTTTTCGCTTGGAACCTTG+CGG + chr8_3:65762770-65762789 Msa1303030:CDS 40.0%
AGAATCACTGAAGGCAAATC+TGG - chr8_3:65762898-65762917 None:intergenic 40.0%
TACACACACAGAATCACTGA+AGG - chr8_3:65762907-65762926 None:intergenic 40.0%
GACAGGGCTTATATAATTCC+AGG - chr8_3:65763186-65763205 None:intergenic 40.0%
!!! TGACTGTTTTTGCTTTCCAG+AGG + chr8_3:65763519-65763538 Msa1303030:intron 40.0%
!!! GACTGTTTTTGCTTTCCAGA+GGG + chr8_3:65763520-65763539 Msa1303030:intron 40.0%
GATCCATATTCACGTTAGTC+CGG + chr8_3:65763547-65763566 Msa1303030:CDS 40.0%
TTCAGAACATTTGTCCTGTG+AGG + chr8_3:65764052-65764071 Msa1303030:intron 40.0%
! AACTATTTCTCATGCCTCAC+AGG - chr8_3:65764069-65764088 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr8_3:65764216-65764235 Msa1303030:intron 40.0%
CGCATATCCATTAGATGCTT+GGG + chr8_3:65764362-65764381 Msa1303030:intron 40.0%
AATTCATGTCATCTTCGAGG+AGG - chr8_3:65764672-65764691 None:intergenic 40.0%
TTTCAGTCTACCCGATTAAC+TGG + chr8_3:65764929-65764948 Msa1303030:intron 40.0%
TTCAGTCTACCCGATTAACT+GGG + chr8_3:65764930-65764949 Msa1303030:intron 40.0%
AACCGATGTTCCCAGTTAAT+CGG - chr8_3:65764943-65764962 None:intergenic 40.0%
!! TAACTGGGAACATCGGTTTA+AGG + chr8_3:65764945-65764964 Msa1303030:intron 40.0%
TGATATTGTTTCCTTGGAGG+AGG + chr8_3:65764993-65765012 Msa1303030:intron 40.0%
GATATTGTTTCCTTGGAGGA+GGG + chr8_3:65764994-65765013 Msa1303030:intron 40.0%
ATATTGTTTCCTTGGAGGAG+GGG + chr8_3:65764995-65765014 Msa1303030:intron 40.0%
GAGAACGATGTTTATCCTCA+AGG + chr8_3:65765040-65765059 Msa1303030:intron 40.0%
AGTAGCACTCATGAAACCTT+GGG - chr8_3:65765109-65765128 None:intergenic 40.0%
!! TGCTGTTTCTTCAATTCAGG+AGG + chr8_3:65765215-65765234 Msa1303030:intron 40.0%
! TGACTAGTGTTGAAAAGGGA+TGG + chr8_3:65765241-65765260 Msa1303030:intron 40.0%
!! TGCTGTTTCTTCAATTCAGG+AGG + chr8_3:65765215-65765234 Msa1303030:intron 40.0%
TCAATTCAGGAGGTTAGGAA+AGG + chr8_3:65765285-65765304 Msa1303030:intron 40.0%
ATTATCTTCATCAAGCAGGG+AGG + chr8_3:65765409-65765428 Msa1303030:CDS 40.0%
ATCAGAAAAGGGTTTCCTAC+AGG - chr8_3:65765436-65765455 None:intergenic 40.0%
AATATGTGAAGGTCTAGGTG+AGG - chr8_3:65765562-65765581 None:intergenic 40.0%
GTTAATGTTAGCGGAGAAGG+AGG - chr8_3:65760455-65760474 None:intergenic 45.0%
! TTGTTGTTGTGACACGGTGA+TGG - chr8_3:65760477-65760496 None:intergenic 45.0%
TTCCCGACCAATTACTCCAA+AGG + chr8_3:65760575-65760594 Msa1303030:CDS 45.0%
!! TGCCTTTGGAGTAATTGGTC+GGG - chr8_3:65760580-65760599 None:intergenic 45.0%
TGGATATGTCATGCCTACAC+CGG + chr8_3:65760721-65760740 Msa1303030:CDS 45.0%
! GATGAGGCAAAGCTTGTTTC+TGG - chr8_3:65760748-65760767 None:intergenic 45.0%
TCACGGCCAGAAAAAAGATG+AGG - chr8_3:65760764-65760783 None:intergenic 45.0%
GAGCATGAAGTATGCAGTCA+CGG - chr8_3:65760781-65760800 None:intergenic 45.0%
TGACTGCATACTTCATGCTC+AGG + chr8_3:65760781-65760800 Msa1303030:CDS 45.0%
! TCAGGAGTGTAAGCAAACTC+AGG - chr8_3:65760888-65760907 None:intergenic 45.0%
TCTGTCTCATTTACGCACTC+AGG - chr8_3:65760906-65760925 None:intergenic 45.0%
!! GAAGAACAACTTAGGTTGGG+AGG + chr8_3:65760924-65760943 Msa1303030:intron 45.0%
!! AGAACAACTTAGGTTGGGAG+GGG + chr8_3:65760926-65760945 Msa1303030:intron 45.0%
! ATGGTGGAATCAGCCGTAAT+GGG + chr8_3:65761050-65761069 Msa1303030:intron 45.0%
AGCAAGGAGAGTAGATCAGA+TGG + chr8_3:65761199-65761218 Msa1303030:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr8_3:65761202-65761221 Msa1303030:intron 45.0%
AGGAGAGTAGATCAGATGGA+GGG + chr8_3:65761203-65761222 Msa1303030:intron 45.0%
GAGGGTAGTCAAATCACTAG+AGG + chr8_3:65761221-65761240 Msa1303030:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG + chr8_3:65761227-65761246 Msa1303030:intron 45.0%
CTTATCCCACTAATTGGGGT+CGG - chr8_3:65761351-65761370 None:intergenic 45.0%
! CCAAGCCTTATCCCACTAAT+TGG - chr8_3:65761357-65761376 None:intergenic 45.0%
CCAATTAGTGGGATAAGGCT+TGG + chr8_3:65761354-65761373 Msa1303030:intron 45.0%
ATTAGTGGGATAAGGCTTGG+TGG + chr8_3:65761357-65761376 Msa1303030:intron 45.0%
TACTTGCATGCCAAGTTCAC+GGG - chr8_3:65761689-65761708 None:intergenic 45.0%
ACAAGGTTACCAAGGTTGCT+AGG + chr8_3:65761824-65761843 Msa1303030:intron 45.0%
TACCAAGGTTGCTAGGATAC+TGG + chr8_3:65761831-65761850 Msa1303030:CDS 45.0%
CAAAGCCAACAGGAGTTGAA+GGG + chr8_3:65761857-65761876 Msa1303030:CDS 45.0%
AAAGCCAACAGGAGTTGAAG+GGG + chr8_3:65761858-65761877 Msa1303030:CDS 45.0%
! CATTGAGAAGGCACAAGAGT+TGG + chr8_3:65761923-65761942 Msa1303030:CDS 45.0%
! GCACAAGAGTTGGTTTAAGG+TGG + chr8_3:65761933-65761952 Msa1303030:intron 45.0%
TCCGTGCAATGCAATTGCAA+TGG + chr8_3:65762035-65762054 Msa1303030:intron 45.0%
TGTGGCTGCAAAATGTGGAA+TGG - chr8_3:65762170-65762189 None:intergenic 45.0%
TGAGATGTGGCTGCAAAATG+TGG - chr8_3:65762175-65762194 None:intergenic 45.0%
GGATGGGGGAATTACAGATT+AGG + chr8_3:65762455-65762474 Msa1303030:intron 45.0%
GTTGGACCTATGTTGGGAAA+TGG + chr8_3:65762525-65762544 Msa1303030:intron 45.0%
TTCCCTTATGCTGCTCATTC+AGG + chr8_3:65762657-65762676 Msa1303030:intron 45.0%
AGCCTGAATGAGCAGCATAA+GGG - chr8_3:65762662-65762681 None:intergenic 45.0%
AAGCCTGAATGAGCAGCATA+AGG - chr8_3:65762663-65762682 None:intergenic 45.0%
GTTGCAACTACTATTGCTGG+AGG - chr8_3:65762715-65762734 None:intergenic 45.0%
! TTTTTCGCTTGGAACCTTGC+GGG + chr8_3:65762771-65762790 Msa1303030:CDS 45.0%
CACATTTCCATGAGTCGGAA+GGG + chr8_3:65763104-65763123 Msa1303030:intron 45.0%
ACATTTCCATGAGTCGGAAG+GGG + chr8_3:65763105-65763124 Msa1303030:intron 45.0%
CAAAGCAAGTGAGTTCTCTC+CGG + chr8_3:65763301-65763320 Msa1303030:CDS 45.0%
CACTGGCAAAAACTGTCTGA+CGG - chr8_3:65763359-65763378 None:intergenic 45.0%
!! TGTGCAGCAGAAATGGACTA+AGG + chr8_3:65763416-65763435 Msa1303030:CDS 45.0%
GAATATGGATCACATCCCTC+TGG - chr8_3:65763538-65763557 None:intergenic 45.0%
TCTTTCCAAGGTCAAAGGGT+GGG - chr8_3:65763712-65763731 None:intergenic 45.0%
ATCTTTCCAAGGTCAAAGGG+TGG - chr8_3:65763713-65763732 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+AGG + chr8_3:65764223-65764242 Msa1303030:intron 45.0%
GCGCATATCCATTAGATGCT+TGG + chr8_3:65764361-65764380 Msa1303030:intron 45.0%
ATGTCTGTTTGAATCAGCCC+AGG + chr8_3:65764504-65764523 Msa1303030:intron 45.0%
GCAGTCTGAGAAGTCGAAAA+AGG + chr8_3:65764573-65764592 Msa1303030:intron 45.0%
TCTGAGAAGTCGAAAAAGGC+TGG + chr8_3:65764577-65764596 Msa1303030:CDS 45.0%
AAAGTCAATCACAAGGGACG+TGG - chr8_3:65764614-65764633 None:intergenic 45.0%
ACCCGATTAACTGGGAACAT+CGG + chr8_3:65764938-65764957 Msa1303030:intron 45.0%
ACCGATGTTCCCAGTTAATC+GGG - chr8_3:65764942-65764961 None:intergenic 45.0%
TATTGTTTCCTTGGAGGAGG+GGG + chr8_3:65764996-65765015 Msa1303030:intron 45.0%
! CTTTGGCTTCAAATCACCCA+AGG + chr8_3:65765090-65765109 Msa1303030:intron 45.0%
GAGTAGCACTCATGAAACCT+TGG - chr8_3:65765110-65765129 None:intergenic 45.0%
ATACTTATGGTAGCCGCACT+AGG - chr8_3:65765168-65765187 None:intergenic 45.0%
ATTCAGGAGGTTAGGAAAGG+TGG + chr8_3:65765288-65765307 Msa1303030:intron 45.0%
GAAGGTCTAGGTGAGGTTTA+TGG - chr8_3:65765555-65765574 None:intergenic 45.0%
AATGTTAGCGGAGAAGGAGG+AGG - chr8_3:65760452-65760471 None:intergenic 50.0%
! TCATCTTCGGTAGTGGCTAG+TGG - chr8_3:65760505-65760524 None:intergenic 50.0%
GGTTTCAGGATGGAAGAGGT+TGG + chr8_3:65760701-65760720 Msa1303030:intron 50.0%
!! GGCAAAGCTTGTTTCTGGAC+CGG - chr8_3:65760743-65760762 None:intergenic 50.0%
!! GATGGTGGAATCAGCCGTAA+TGG + chr8_3:65761049-65761068 Msa1303030:intron 50.0%
ACTAATTGGGGTCGGCTACA+TGG - chr8_3:65761343-65761362 None:intergenic 50.0%
ATGTAGCCGACCCCAATTAG+TGG + chr8_3:65761342-65761361 Msa1303030:intron 50.0%
TGTAGCCGACCCCAATTAGT+GGG + chr8_3:65761343-65761362 Msa1303030:intron 50.0%
CGACCCCAATTAGTGGGATA+AGG + chr8_3:65761349-65761368 Msa1303030:intron 50.0%
TAGAGCCCGAACAACATGGT+AGG - chr8_3:65761492-65761511 None:intergenic 50.0%
GAGATAGAGCCCGAACAACA+TGG - chr8_3:65761496-65761515 None:intergenic 50.0%
CATATCAAGGGGAACACCCT+TGG + chr8_3:65761763-65761782 Msa1303030:intron 50.0%
AAGGGGAACACCCTTGGAAA+AGG + chr8_3:65761769-65761788 Msa1303030:intron 50.0%
AGCCAGTATCCTAGCAACCT+TGG - chr8_3:65761836-65761855 None:intergenic 50.0%
! ATACTGGCTGCAAAGCCAAC+AGG + chr8_3:65761847-65761866 Msa1303030:CDS 50.0%
GCAAAGCCAACAGGAGTTGA+AGG + chr8_3:65761856-65761875 Msa1303030:CDS 50.0%
ATCAACAACCAACACCCGCA+AGG - chr8_3:65762788-65762807 None:intergenic 50.0%
CCTTCCGACTCATGGAAATG+TGG - chr8_3:65763106-65763125 None:intergenic 50.0%
CCACATTTCCATGAGTCGGA+AGG + chr8_3:65763103-65763122 Msa1303030:intron 50.0%
GAAAAACCCCTTCCGACTCA+TGG - chr8_3:65763114-65763133 None:intergenic 50.0%
GTGCTGTGGTATAGATGCAC+TGG - chr8_3:65763376-65763395 None:intergenic 50.0%
ACGAAGCTGTGCAGCAGAAA+TGG + chr8_3:65763409-65763428 Msa1303030:CDS 50.0%
CCACCGGACTAACGTGAATA+TGG - chr8_3:65763553-65763572 None:intergenic 50.0%
CCATATTCACGTTAGTCCGG+TGG + chr8_3:65763550-65763569 Msa1303030:CDS 50.0%
TGAGATAGACGAGACGGCAT+GGG - chr8_3:65763578-65763597 None:intergenic 50.0%
ATGAGATAGACGAGACGGCA+TGG - chr8_3:65763579-65763598 None:intergenic 50.0%
CTTTCCAAGGTCAAAGGGTG+GGG - chr8_3:65763711-65763730 None:intergenic 50.0%
! AATGCCAGACTTGGGAGCAT+CGG - chr8_3:65763872-65763891 None:intergenic 50.0%
AAGGTCACAGGTTCAAGTCC+TGG + chr8_3:65764235-65764254 Msa1303030:intron 50.0%
ACAAAGCTCCCGCATATGCA+GGG - chr8_3:65764331-65764350 None:intergenic 50.0%
! TCTAATGGATATGCGCAGCC+CGG - chr8_3:65764357-65764376 None:intergenic 50.0%
TCAATCACAAGGGACGTGGA+TGG - chr8_3:65764610-65764629 None:intergenic 50.0%
TCATGTCATCTTCGAGGAGG+AGG - chr8_3:65764669-65764688 None:intergenic 50.0%
TTCACGAGCAGCTTCTCTGT+TGG + chr8_3:65764696-65764715 Msa1303030:CDS 50.0%
GAGGAGGGGGAATCAAGAAT+GGG + chr8_3:65765009-65765028 Msa1303030:intron 50.0%
AGGAGGGGGAATCAAGAATG+GGG + chr8_3:65765010-65765029 Msa1303030:intron 50.0%
GGGGAATCAAGAATGGGGAA+CGG + chr8_3:65765015-65765034 Msa1303030:intron 50.0%
GCAACAGATGTAGCAGCTAG+AGG + chr8_3:65765327-65765346 Msa1303030:CDS 50.0%
CACCAGCATTATAGTCTCGC+AGG + chr8_3:65765470-65765489 Msa1303030:CDS 50.0%
CTCCTGCGAGACTATAATGC+TGG - chr8_3:65765475-65765494 None:intergenic 50.0%
GCATTATAGTCTCGCAGGAG+CGG + chr8_3:65765475-65765494 Msa1303030:CDS 50.0%
!! GCTTGTTTCTGGACCGGTGT+AGG - chr8_3:65760737-65760756 None:intergenic 55.0%
TGCATGCCAAGTTCACGGGT+GGG - chr8_3:65761685-65761704 None:intergenic 55.0%
TTGCATGCCAAGTTCACGGG+TGG - chr8_3:65761686-65761705 None:intergenic 55.0%
TGCTCCCCTTCAACTCCTGT+TGG - chr8_3:65761865-65761884 None:intergenic 55.0%
TCTCGCCGTTGGCCAAATTG+TGG + chr8_3:65762347-65762366 Msa1303030:intron 55.0%
!! GCGGGTGTTGGTTGTTGATG+AGG + chr8_3:65762789-65762808 Msa1303030:CDS 55.0%
CTTTCCCCACCCTTTGACCT+TGG + chr8_3:65763704-65763723 Msa1303030:intron 55.0%
CAATCCGATGCTCCCAAGTC+TGG + chr8_3:65763865-65763884 Msa1303030:CDS 55.0%
CATATGCAGGGTTCGGGAAG+GGG - chr8_3:65764319-65764338 None:intergenic 55.0%
GCATATGCAGGGTTCGGGAA+GGG - chr8_3:65764320-65764339 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG + chr8_3:65764319-65764338 Msa1303030:intron 55.0%
TTCCCGAACCCTGCATATGC+GGG + chr8_3:65764320-65764339 Msa1303030:intron 55.0%
CACAAAGCTCCCGCATATGC+AGG - chr8_3:65764332-65764351 None:intergenic 55.0%
! TATGCGGGAGCTTTGTGCAC+CGG + chr8_3:65764335-65764354 Msa1303030:intron 55.0%
TCTTGATTCCCCCTCCTCCA+AGG - chr8_3:65765007-65765026 None:intergenic 55.0%
GGAGGAGGGGGAATCAAGAA+TGG + chr8_3:65765008-65765027 Msa1303030:intron 55.0%
CAGGAGGTTAGGAAAGGTGG+CGG + chr8_3:65765291-65765310 Msa1303030:intron 55.0%
ATCAAGCAGGGAGGACCTGT+AGG + chr8_3:65765418-65765437 Msa1303030:CDS 55.0%
! TTGGTGCCCACCCGTGAACT+TGG + chr8_3:65761676-65761695 Msa1303030:CDS 60.0%
GCTTGGAACCTTGCGGGTGT+TGG + chr8_3:65762777-65762796 Msa1303030:CDS 60.0%
CGCATATGCAGGGTTCGGGA+AGG - chr8_3:65764321-65764340 None:intergenic 60.0%
CTCCCGCATATGCAGGGTTC+GGG - chr8_3:65764325-65764344 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG - chr8_3:65764326-65764345 None:intergenic 60.0%
! ATGCGGGAGCTTTGTGCACC+GGG + chr8_3:65764336-65764355 Msa1303030:intron 60.0%
CGGGAAGGGGTCCTACCGTT+TGG - chr8_3:65764306-65764325 None:intergenic 65.0%
CGAGACGGCATGGGCTCCAC+CGG - chr8_3:65763569-65763588 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 65760264 65765757 65760264 ID=Msa1303030;Name=Msa1303030
chr8_3 mRNA 65760264 65765757 65760264 ID=Msa1303030-mRNA-1;Parent=Msa1303030;Name=Msa1303030-mRNA-1;_AED=0.22;_eAED=0.22;_QI=257|1|1|1|0.88|0.9|10|200|425
chr8_3 exon 65760264 65760639 65760264 ID=Msa1303030-mRNA-1:exon:19962;Parent=Msa1303030-mRNA-1
chr8_3 exon 65760709 65760802 65760709 ID=Msa1303030-mRNA-1:exon:19963;Parent=Msa1303030-mRNA-1
chr8_3 exon 65761592 65761705 65761592 ID=Msa1303030-mRNA-1:exon:19964;Parent=Msa1303030-mRNA-1
chr8_3 exon 65761829 65761951 65761829 ID=Msa1303030-mRNA-1:exon:19965;Parent=Msa1303030-mRNA-1
chr8_3 exon 65762706 65762810 65762706 ID=Msa1303030-mRNA-1:exon:19966;Parent=Msa1303030-mRNA-1
chr8_3 exon 65763279 65763437 65763279 ID=Msa1303030-mRNA-1:exon:19967;Parent=Msa1303030-mRNA-1
chr8_3 exon 65763539 65763607 65763539 ID=Msa1303030-mRNA-1:exon:19968;Parent=Msa1303030-mRNA-1
chr8_3 exon 65763820 65763909 65763820 ID=Msa1303030-mRNA-1:exon:19969;Parent=Msa1303030-mRNA-1
chr8_3 exon 65764577 65764717 65764577 ID=Msa1303030-mRNA-1:exon:19970;Parent=Msa1303030-mRNA-1
chr8_3 exon 65765294 65765757 65765294 ID=Msa1303030-mRNA-1:exon:19971;Parent=Msa1303030-mRNA-1
chr8_3 five_prime_UTR 65760264 65760520 65760264 ID=Msa1303030-mRNA-1:five_prime_utr;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65760521 65760639 65760521 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65760709 65760802 65760709 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65761592 65761705 65761592 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65761829 65761951 65761829 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65762706 65762810 65762706 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65763279 65763437 65763279 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65763539 65763607 65763539 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65763820 65763909 65763820 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65764577 65764717 65764577 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 CDS 65765294 65765557 65765294 ID=Msa1303030-mRNA-1:cds;Parent=Msa1303030-mRNA-1
chr8_3 three_prime_UTR 65765558 65765757 65765558 ID=Msa1303030-mRNA-1:three_prime_utr;Parent=Msa1303030-mRNA-1
Gene Sequence

>Msa1303030

ATGATACAGTTCGAACAACTCCCACCACTCTCAGACAATTATGTCAATATCATGTTCCCGACCAATTACTCCAAAGGCAATTTCAACTCTAATTTCCATTATTCATTCCTTTCTCAAATGATGGAAGAGGTTGGATATGTCATGCCTACACCGGTCCAGAAACAAGCTTTGCCTCATCTTTTTTCTGGCCGTGACTGCATACTTCATGCTCAGACAGGTTCTGGGAAGACACTTGCATACTTGCTTTTGATCTATTCCATTATTAACACAAGAAAATCTTCTTTTCAAGCACTAGTTTTGGTGCCCACCCGTGAACTTGGCATGCAAGTTACCAAGGTTGCTAGGATACTGGCTGCAAAGCCAACAGGAGTTGAAGGGGAGCAAAGATCATGTACCATCATGGCTTTGTTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTTAAGGCTGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTTTGTGCCAAATGCTTGAAAGACAACTTTTTTCGCTTGGAACCTTGCGGGTGTTGGTTGTTGATGAGGTTGATTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTCCGGAAGATTTTGACCTCATATTCGTCTTGTAATAACCGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTGTGCAGCAGAAATGGACTAAGAGGGATGTGATCCATATTCACGTTAGTCCGGTGGAGCCCATGCCGTCTCGTCTATCTCATAGATTTATAGTATGTGATATAAAAAGAAAACTACAAACCCTGTTATACTTGATACAATCCGATGCTCCCAAGTCTGGCATTATATTTGTTAGTGAGCAGTCTGAGAAGTCGAAAAAGGCTGGTAATTCTCCATCCACGTCCCTTGTGATTGACTTTCTAAAAACATCATATCATGGTTCTTTAGATATCCTCCTCCTCGAAGATGACATGAATTTCAATTCACGAGCAGCTTCTCTGTTGGAGGTTAGGAAAGGTGGCGGCTATCTTCTAGTAGCAACAGATGTAGCAGCTAGAGGAGTTGACTTTCCAGAAATGACTCACATATACAACTTTGATCTGCCAAAAACTGCCATAGATTATCTTCATCAAGCAGGGAGGACCTGTAGGAAACCCTTTTCTGATGTGAATTGTACTGTCACCAGCATTATAGTCTCGCAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGAGGTTTGTCTGTACAGAGCTTATTCCATAA

Protein sequence

>Msa1303030

MIQFEQLPPLSDNYVNIMFPTNYSKGNFNSNFHYSFLSQMMEEVGYVMPTPVQKQALPHLFSGRDCILHAQTGSGKTLAYLLLIYSIINTRKSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGTLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLYLIQSDAPKSGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKTAIDYLHQAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELRFVCTELIP*