AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1244380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244380 MtrunA17_Chr8g0359571 96.667 240 8 0 1 240 1 240 5.88e-176 483
Msa1244380 MtrunA17_Chr3g0120801 39.316 117 71 0 104 220 26 142 9.13e-22 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244380 AT1G78630.1 70.776 219 57 2 27 240 25 241 6.29e-109 313
Msa1244380 AT3G01790.1 33.588 131 85 1 104 232 32 162 8.73e-19 82.0
Msa1244380 AT3G01790.2 33.588 131 85 1 104 232 32 162 8.73e-19 82.0
Msa1244380 AT3G01790.3 37.000 100 63 0 104 203 32 131 5.93e-16 73.2

Find 83 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGAATATTTACTTAAAA+TGG 0.125505 8_2:+32460418 None:intergenic
TGTGCTTGCTCTATCTTTAC+TGG 0.165540 8_2:+32465042 None:intergenic
TGTATTCTCTTATCCCTAAT+TGG 0.216660 8_2:+32460740 None:intergenic
GCCCATTGATTTGCCAATTA+GGG 0.248728 8_2:-32460753 Msa1244380:CDS
AGCCCATTGATTTGCCAATT+AGG 0.260148 8_2:-32460754 Msa1244380:CDS
ATCTTCTTCGACTTCAACTA+TGG 0.265187 8_2:+32464814 None:intergenic
TGCGCTTCATGTGGATGATC+TGG 0.278875 8_2:+32460779 None:intergenic
AGTGCCGCCGATAAAGCTTC+TGG 0.285755 8_2:+32462636 None:intergenic
GATGCTACAGATAAAATTCT+TGG 0.293196 8_2:-32464084 Msa1244380:CDS
TTGACATGATCCGAAGCTTT+TGG 0.324108 8_2:+32464132 None:intergenic
GTTGAACTTACCCTCCCTTT+TGG 0.329004 8_2:+32462518 None:intergenic
GAACCTGAGCCCCGCTTTCA+AGG 0.332396 8_2:-32464773 Msa1244380:CDS
AGTAATGATTGCAGGACATT+TGG 0.339663 8_2:-32464170 Msa1244380:intron
GTTCTTTGTTGAATCTTGAT+AGG 0.344705 8_2:-32460516 Msa1244380:three_prime_UTR
GAGAGCTTGATGAGATCTAT+AGG 0.362731 8_2:-32460338 Msa1244380:three_prime_UTR
AAGCTCGATGTTCAGTGAAA+TGG 0.382296 8_2:+32460634 None:intergenic
AGAGCTTGATGAGATCTATA+GGG 0.384838 8_2:-32460337 Msa1244380:three_prime_UTR
AAGGACATTGTTGCTGTTGA+TGG 0.393115 8_2:+32465010 None:intergenic
AGAGGACCCAGAAGCTTTAT+CGG 0.394368 8_2:-32462643 Msa1244380:CDS
CTGGGCCGCTATAAACCTTC+AGG 0.404656 8_2:+32460798 None:intergenic
ATCCCTAATTGGCAAATCAA+TGG 0.418119 8_2:+32460751 None:intergenic
GCATGTTCAATAATTCGTTC+AGG 0.425127 8_2:+32462557 None:intergenic
TCATACCGGGCCTTGAAAGC+GGG 0.445716 8_2:+32464763 None:intergenic
GATGAGATCTATAGGGGCTT+AGG 0.449363 8_2:-32460330 None:intergenic
GGGCCTTGAAAGCGGGGCTC+AGG 0.450923 8_2:+32464770 None:intergenic
CAGGAATTCTGTTCTGCAGC+TGG 0.453155 8_2:+32462576 None:intergenic
TCCCTAATTGGCAAATCAAT+GGG 0.458371 8_2:+32460752 None:intergenic
TCTGTAGATAAATGCAGAAA+AGG 0.458587 8_2:-32462684 Msa1244380:intron
GCGCTTCATGTGGATGATCT+GGG 0.462607 8_2:+32460780 None:intergenic
GTGCTTGCTCTATCTTTACT+GGG 0.465898 8_2:+32465043 None:intergenic
GTTCGTGGCATGCTTCCAAA+AGG 0.478146 8_2:-32462533 Msa1244380:CDS
GTTGGTGTATGCAGCTTGGC+AGG 0.478824 8_2:-32460835 Msa1244380:intron
TAATGTAAGTAGAGCAAGTG+TGG 0.483171 8_2:+32465071 None:intergenic
GTGCCGCCGATAAAGCTTCT+GGG 0.487074 8_2:+32462637 None:intergenic
ATTATTGAACATGCTGTTCG+TGG 0.489898 8_2:-32462548 Msa1244380:CDS
TTTCATTGTCCATTCTCAGC+AGG 0.495956 8_2:-32464843 Msa1244380:CDS
AGGACATTTGGAACACAACC+TGG 0.498468 8_2:-32464158 Msa1244380:CDS
CGGCGGCACTCAGGTCGACC+TGG 0.501166 8_2:-32462623 Msa1244380:CDS
TGAGCCCCGCTTTCAAGGCC+CGG 0.505387 8_2:-32464768 Msa1244380:intron
TGAGAGAATGAAGAAGATGA+AGG 0.506757 8_2:+32464959 None:intergenic
TGGTAATTGACAAGCAAGAA+AGG 0.507358 8_2:+32464910 None:intergenic
GACTCTATTCACACGCCTGA+AGG 0.513706 8_2:-32460813 Msa1244380:CDS
TGGAAGTGTCCTGCTGAGAA+TGG 0.515415 8_2:+32464834 None:intergenic
GGTACATGTTTAATCTTCAA+AGG 0.516354 8_2:+32460478 None:intergenic
AAGCTTTATCGGCGGCACTC+AGG 0.528770 8_2:-32462632 Msa1244380:CDS
AAATGCACCCATGTCCACAC+TGG 0.530923 8_2:+32464002 None:intergenic
ACGTTTGTTAATTTCTGAGA+GGG 0.535578 8_2:+32460383 None:intergenic
CAAGATTCAACAAAGAACCT+TGG 0.539606 8_2:+32460521 None:intergenic
GATAATGAAAGGTTTGAAAG+TGG 0.541301 8_2:+32464890 None:intergenic
AACCTGGTATCCAAAAGCTT+CGG 0.541687 8_2:-32464142 Msa1244380:CDS
ATGGGCTGCTGCGCTTCATG+TGG 0.546351 8_2:+32460770 None:intergenic
CATGGGTGCATTTGTAATTG+TGG 0.546463 8_2:-32463992 Msa1244380:intron
GCAGAAAAGGTTGCTGTCAG+TGG 0.548150 8_2:-32462671 Msa1244380:CDS
TTGCTCTATCTTTACTGGGA+GGG 0.548495 8_2:+32465047 None:intergenic
GGTGTATGTTGTTTAGAGCA+TGG 0.549133 8_2:-32460697 Msa1244380:three_prime_UTR
TTGAAGAAGATGATAATGAA+AGG 0.554980 8_2:+32464879 None:intergenic
GTCATACCGGGCCTTGAAAG+CGG 0.555617 8_2:+32464762 None:intergenic
GAGAGAATGAAGAAGATGAA+GGG 0.556314 8_2:+32464960 None:intergenic
CAGAAAAGGTTGCTGTCAGT+GGG 0.568241 8_2:-32462670 Msa1244380:CDS
AATGCACCCATGTCCACACT+GGG 0.589532 8_2:+32464003 None:intergenic
GATGAAGGGAACGTCACTGA+TGG 0.593477 8_2:+32464974 None:intergenic
TTCGTGGCATGCTTCCAAAA+GGG 0.595250 8_2:-32462532 Msa1244380:CDS
AATGTAAGTAGAGCAAGTGT+GGG 0.602646 8_2:+32465072 None:intergenic
TTATACACCCAGTGTGGACA+TGG 0.605815 8_2:-32464010 Msa1244380:CDS
CTTGCTCTATCTTTACTGGG+AGG 0.606998 8_2:+32465046 None:intergenic
CATACCGGGCCTTGAAAGCG+GGG 0.608967 8_2:+32464764 None:intergenic
GTCTCGACTGTCATACCACC+AGG 0.617174 8_2:+32462605 None:intergenic
AGTTGCAGAGATAAAGACAT+AGG 0.617291 8_2:-32460718 Msa1244380:exon
AACGTTTGTTAATTTCTGAG+AGG 0.619731 8_2:+32460382 None:intergenic
GAGCTTGATGAGATCTATAG+GGG 0.623695 8_2:-32460336 Msa1244380:three_prime_UTR
TGATGGTGAACCACACAGCA+AGG 0.624881 8_2:+32464991 None:intergenic
GTGGCATGCTTCCAAAAGGG+AGG 0.631240 8_2:-32462529 Msa1244380:CDS
TGAGAATGGACAATGAAAGA+TGG 0.639431 8_2:+32464848 None:intergenic
TGGCATGCTTCCAAAAGGGA+GGG 0.645169 8_2:-32462528 Msa1244380:intron
CAATTGCGAATCACATCCGA+GGG 0.651937 8_2:-32464047 Msa1244380:CDS
ACAATTGCGAATCACATCCG+AGG 0.652462 8_2:-32464048 Msa1244380:CDS
TATACACCCAGTGTGGACAT+GGG 0.666351 8_2:-32464009 Msa1244380:CDS
ATGTCAACACAGCGAAAACG+TGG 0.673537 8_2:-32464116 Msa1244380:CDS
ACACGCCTGAAGGTTTATAG+CGG 0.692335 8_2:-32460803 Msa1244380:CDS
GGACCCAGAAGCTTTATCGG+CGG 0.709633 8_2:-32462640 Msa1244380:CDS
AGTGACTTATACACCCAGTG+TGG 0.728515 8_2:-32464016 Msa1244380:CDS
GCAACAATGTCCTTGCTGTG+TGG 0.747954 8_2:-32465001 Msa1244380:exon
GGTTCAACACAGATGAAACG+AGG 0.749686 8_2:+32464791 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATAAAATTTTAAAATGA+TGG + chr8_2:32460855-32460874 None:intergenic 10.0%
!!! TGGTTTTAAATTTTAATTAT+AGG - chr8_2:32462447-32462466 Msa1244380:intron 10.0%
!! ATAATTGAAGTAAATTAACA+TGG + chr8_2:32461002-32461021 None:intergenic 15.0%
!!! TATTTTTAAAGCTTTTAACT+TGG - chr8_2:32461172-32461191 Msa1244380:intron 15.0%
!!! AATTTTCTTTTGGTTTAAAA+TGG - chr8_2:32461549-32461568 Msa1244380:intron 15.0%
!!! TATTTTATTTCGAAAAAAGA+TGG - chr8_2:32461780-32461799 Msa1244380:intron 15.0%
!!! TGATATTTTAGTTTTTTTTG+TGG + chr8_2:32462528-32462547 None:intergenic 15.0%
!! AAAAACTAAAATATCAATAG+AGG - chr8_2:32462532-32462551 Msa1244380:CDS 15.0%
!! TATAAATTGTATACAATGTT+AGG + chr8_2:32464357-32464376 None:intergenic 15.0%
!!! ACTATTTTTGTAAACAATAA+AGG - chr8_2:32464520-32464539 Msa1244380:intron 15.0%
!! TATGGAATATTTACTTAAAA+TGG + chr8_2:32464997-32465016 None:intergenic 15.0%
!!! AATTTTCTGGTATTAATTTC+TGG - chr8_2:32460747-32460766 Msa1244380:CDS 20.0%
!!! ATTTTCTGGTATTAATTTCT+GGG - chr8_2:32460748-32460767 Msa1244380:CDS 20.0%
!!! AGTTTTGACAATAAAAATTG+AGG + chr8_2:32460807-32460826 None:intergenic 20.0%
!!! GAAACTGGAATATAATTTTA+TGG - chr8_2:32460887-32460906 Msa1244380:intron 20.0%
!! AAAAACTGAAAGGAAAAAAT+TGG + chr8_2:32461085-32461104 None:intergenic 20.0%
!!! TCCTTTCAGTTTTTATTTTT+TGG - chr8_2:32461091-32461110 Msa1244380:intron 20.0%
!! AATGATGATAACAATTTGAA+GGG + chr8_2:32461746-32461765 None:intergenic 20.0%
!! CTGAAATAATTAGAGAAATA+AGG + chr8_2:32461945-32461964 None:intergenic 20.0%
!!! AAGTTTTTTTACTATGCATT+TGG - chr8_2:32462427-32462446 Msa1244380:intron 20.0%
!! AATTGTTTATCATGGAAAAT+TGG + chr8_2:32462503-32462522 None:intergenic 20.0%
!!! TGCTAGGTTAAAATTATTTT+TGG - chr8_2:32463803-32463822 Msa1244380:intron 20.0%
!!! AATATCTTTAATTTCTGTCA+GGG - chr8_2:32464031-32464050 Msa1244380:CDS 20.0%
!! AAGAAAAGAAAAGAAAGAAT+AGG - chr8_2:32464195-32464214 Msa1244380:intron 20.0%
!! TTGTATACAATTTATACTCA+TGG - chr8_2:32464361-32464380 Msa1244380:intron 20.0%
!! AAAATCAATCTAAAGAGATA+AGG + chr8_2:32464495-32464514 None:intergenic 20.0%
!!! TATCTCTTTAGATTGATTTT+TGG - chr8_2:32464495-32464514 Msa1244380:intron 20.0%
!!! TTGTATTGTTTTTTTATCCA+AGG - chr8_2:32464874-32464893 Msa1244380:CDS 20.0%
!!! ACATGTACCATTTTTAAATA+TGG - chr8_2:32464948-32464967 Msa1244380:CDS 20.0%
!! CTCAAAACCATATTTAAAAA+TGG + chr8_2:32464958-32464977 None:intergenic 20.0%
!! TTGAAGAAGATGATAATGAA+AGG + chr8_2:32460536-32460555 None:intergenic 25.0%
!!! TCTCTCTCTTTTTTGTTAAT+GGG - chr8_2:32460676-32460695 Msa1244380:three_prime_UTR 25.0%
! AATCATATAGAACAACACTT+TGG + chr8_2:32460720-32460739 None:intergenic 25.0%
!! ATGATTTTGCTGAAATTTTC+TGG - chr8_2:32460734-32460753 Msa1244380:CDS 25.0%
! ACTAATGAGATACAAAATGT+AGG + chr8_2:32461026-32461045 None:intergenic 25.0%
!! TCTCATTAGTTTAATTAGCT+TGG - chr8_2:32461036-32461055 Msa1244380:intron 25.0%
!! TAATTAGCTTGGAAATGTAT+AGG - chr8_2:32461047-32461066 Msa1244380:intron 25.0%
! GCCAAAAAATAAAAACTGAA+AGG + chr8_2:32461095-32461114 None:intergenic 25.0%
!! ATTGCTTTAAATCTTTACGT+CGG - chr8_2:32461133-32461152 Msa1244380:intron 25.0%
!! AATCATTACTCTTTTCAGTT+AGG + chr8_2:32461232-32461251 None:intergenic 25.0%
! CTGCATTAATTATTTGCAAT+TGG - chr8_2:32461452-32461471 Msa1244380:intron 25.0%
! TTAATTATTTGCAATTGGCA+TGG - chr8_2:32461457-32461476 Msa1244380:intron 25.0%
!! TTTTTACTTGAACATCTTTC+TGG - chr8_2:32461524-32461543 Msa1244380:intron 25.0%
!!! CTTTCTGGTTAATTTTCTTT+TGG - chr8_2:32461539-32461558 Msa1244380:intron 25.0%
!!! TTCTTTTGGTTTAAAATGGA+TGG - chr8_2:32461553-32461572 Msa1244380:intron 25.0%
! GGAACTTATGAAATATATGA+TGG - chr8_2:32461574-32461593 Msa1244380:intron 25.0%
!!! CAAACCAAAGTTTTTTGAAA+CGG - chr8_2:32461632-32461651 Msa1244380:intron 25.0%
! GAATGATGATAACAATTTGA+AGG + chr8_2:32461747-32461766 None:intergenic 25.0%
!!! GAAATTTTTAATAAGTGCTG+AGG + chr8_2:32461872-32461891 None:intergenic 25.0%
! CATGTTATAAATAAGAAGAC+GGG + chr8_2:32461922-32461941 None:intergenic 25.0%
! GCATGTTATAAATAAGAAGA+CGG + chr8_2:32461923-32461942 None:intergenic 25.0%
!!! CATTAAGAGTACTAGTATTT+AGG + chr8_2:32462114-32462133 None:intergenic 25.0%
! GTTATGTATATCTGATGTTA+AGG - chr8_2:32462369-32462388 Msa1244380:intron 25.0%
! TATCTATAGAATGTAGAAAG+CGG + chr8_2:32462401-32462420 None:intergenic 25.0%
! TCTACATTCTATAGATAGTA+AGG - chr8_2:32462404-32462423 Msa1244380:intron 25.0%
! ATGTATGACTAATTATCTGA+TGG - chr8_2:32462471-32462490 Msa1244380:intron 25.0%
! TTGTGGAAAATTGTTTATCA+TGG + chr8_2:32462511-32462530 None:intergenic 25.0%
! AAACAAAATCTCCTACAAAA+TGG - chr8_2:32462555-32462574 Msa1244380:CDS 25.0%
!! AAACAATACAACCATTTTGT+AGG + chr8_2:32462569-32462588 None:intergenic 25.0%
! CATTAATGACTATGTTTATG+AGG - chr8_2:32462606-32462625 Msa1244380:CDS 25.0%
!!! TCTTGGACTATTATTTTAAC+TGG - chr8_2:32462702-32462721 Msa1244380:intron 25.0%
!!! CTTGGACTATTATTTTAACT+GGG - chr8_2:32462703-32462722 Msa1244380:intron 25.0%
!!! TTGGACTATTATTTTAACTG+GGG - chr8_2:32462704-32462723 Msa1244380:intron 25.0%
! ATATATTCTTCCATCAGTTA+TGG + chr8_2:32463059-32463078 None:intergenic 25.0%
! TACCATTATTCATTATGTGA+CGG + chr8_2:32463361-32463380 None:intergenic 25.0%
! CACAATAAAGAAGCAAAAAA+TGG + chr8_2:32463532-32463551 None:intergenic 25.0%
!!! TTTTCCATTGTTATTACTTC+CGG - chr8_2:32463657-32463676 Msa1244380:intron 25.0%
!! AGATGGAGAAAACAAATTTT+TGG + chr8_2:32463706-32463725 None:intergenic 25.0%
! TTGATCTTGTTACAGATTAT+TGG - chr8_2:32463887-32463906 Msa1244380:intron 25.0%
!! GAATATCTTTAATTTCTGTC+AGG - chr8_2:32464030-32464049 Msa1244380:CDS 25.0%
! AATAGTAGAGTAGTTAAAGT+AGG + chr8_2:32464328-32464347 None:intergenic 25.0%
!! TAACTGTGTTAATTCTAAAG+AGG - chr8_2:32464466-32464485 Msa1244380:intron 25.0%
!! AACTGTGTTAATTCTAAAGA+GGG - chr8_2:32464467-32464486 Msa1244380:intron 25.0%
GATAATGAAAGGTTTGAAAG+TGG + chr8_2:32460525-32460544 None:intergenic 30.0%
!!! CTCTCTCTCTTTTTTGTTAA+TGG - chr8_2:32460675-32460694 Msa1244380:three_prime_UTR 30.0%
CATGATAGAAAGAATGAAAC+TGG - chr8_2:32460872-32460891 Msa1244380:intron 30.0%
AAACCAGAAAGAAGATACTA+AGG + chr8_2:32460921-32460940 None:intergenic 30.0%
GATGCTACAGATAAAATTCT+TGG - chr8_2:32461328-32461347 Msa1244380:intron 30.0%
!!! CATGGAAATGCTGTTTTTTA+TGG - chr8_2:32461475-32461494 Msa1244380:intron 30.0%
ATGTCCGTTTCAAAAAACTT+TGG + chr8_2:32461639-32461658 None:intergenic 30.0%
!!! GTTTTTTGAAACGGACATAT+AGG - chr8_2:32461641-32461660 Msa1244380:intron 30.0%
!! ATTTTAGCCTTTCCTTTTTG+CGG - chr8_2:32461681-32461700 Msa1244380:intron 30.0%
ATCATCATTCTGATAGAAAC+TGG - chr8_2:32461757-32461776 Msa1244380:intron 30.0%
ACAATGGACGTTATATTACA+AGG + chr8_2:32461976-32461995 None:intergenic 30.0%
GATAGTTAACAACTGTACAA+TGG + chr8_2:32461992-32462011 None:intergenic 30.0%
AATAACAGTAACTCTCCAAA+AGG + chr8_2:32462046-32462065 None:intergenic 30.0%
ATGTCACATTGACAGAAATT+TGG - chr8_2:32462173-32462192 Msa1244380:intron 30.0%
TTATGTCTGAATGTTTGTCA+TGG - chr8_2:32462305-32462324 Msa1244380:intron 30.0%
!! TCATGGTTTTTCGATCATAA+TGG - chr8_2:32462322-32462341 Msa1244380:intron 30.0%
!! CATGGTTTTTCGATCATAAT+GGG - chr8_2:32462323-32462342 Msa1244380:intron 30.0%
TCATAAAGCAATCGTCTAAA+CGG + chr8_2:32462680-32462699 None:intergenic 30.0%
TCTGTAGATAAATGCAGAAA+AGG - chr8_2:32462728-32462747 Msa1244380:intron 30.0%
AGATTCATTTCCATAACTGA+TGG - chr8_2:32463046-32463065 Msa1244380:intron 30.0%
!!! TACACGTTTTTGGTTTGAAA+GGG - chr8_2:32463125-32463144 Msa1244380:intron 30.0%
! ATTATTCATTATGTGACGGA+GGG + chr8_2:32463357-32463376 None:intergenic 30.0%
AAGTCGAAGTTGTGATAATT+GGG + chr8_2:32463403-32463422 None:intergenic 30.0%
AAAGTCGAAGTTGTGATAAT+TGG + chr8_2:32463404-32463423 None:intergenic 30.0%
AACAATGGAAAAGGAGAAAT+GGG + chr8_2:32463649-32463668 None:intergenic 30.0%
TAACAATGGAAAAGGAGAAA+TGG + chr8_2:32463650-32463669 None:intergenic 30.0%
GGAAGTAATAACAATGGAAA+AGG + chr8_2:32463658-32463677 None:intergenic 30.0%
!! TGGAGAAAACAAATTTTTGG+TGG + chr8_2:32463703-32463722 None:intergenic 30.0%
!!! TTTTAACCTAGCATTGATGA+GGG + chr8_2:32463796-32463815 None:intergenic 30.0%
!!! ATTTTAACCTAGCATTGATG+AGG + chr8_2:32463797-32463816 None:intergenic 30.0%
AGCAAGACAAAACACAAATT+TGG + chr8_2:32463830-32463849 None:intergenic 30.0%
! ATTTGTGTTTTGTCTTGCTT+TGG - chr8_2:32463831-32463850 Msa1244380:intron 30.0%
GATATTCTACTTGAATTGAC+AGG + chr8_2:32464017-32464036 None:intergenic 30.0%
TTCTATTCCATTCAGTTCTT+GGG + chr8_2:32464154-32464173 None:intergenic 30.0%
TTTCTATTCCATTCAGTTCT+TGG + chr8_2:32464155-32464174 None:intergenic 30.0%
AGGATTGTCATGTATAAACA+GGG + chr8_2:32464308-32464327 None:intergenic 30.0%
TAGGATTGTCATGTATAAAC+AGG + chr8_2:32464309-32464328 None:intergenic 30.0%
! AAGTTCATTGGTTGTTTATG+TGG - chr8_2:32464419-32464438 Msa1244380:intron 30.0%
TGTATTCTCTTATCCCTAAT+TGG + chr8_2:32464675-32464694 None:intergenic 30.0%
GTTCTTTGTTGAATCTTGAT+AGG - chr8_2:32464896-32464915 Msa1244380:CDS 30.0%
! CTTCAAAGGTACACAAAAAA+AGG + chr8_2:32464923-32464942 None:intergenic 30.0%
GGTACATGTTTAATCTTCAA+AGG + chr8_2:32464937-32464956 None:intergenic 30.0%
AGAGGGAAAAAGATAAGATA+TGG + chr8_2:32465015-32465034 None:intergenic 30.0%
! ACGTTTGTTAATTTCTGAGA+GGG + chr8_2:32465032-32465051 None:intergenic 30.0%
! AACGTTTGTTAATTTCTGAG+AGG + chr8_2:32465033-32465052 None:intergenic 30.0%
! TCATCAAGCTCTCAATTTTA+TGG + chr8_2:32465067-32465086 None:intergenic 30.0%
AATGTAAGTAGAGCAAGTGT+GGG + chr8_2:32460343-32460362 None:intergenic 35.0%
TAATGTAAGTAGAGCAAGTG+TGG + chr8_2:32460344-32460363 None:intergenic 35.0%
GAGAGAATGAAGAAGATGAA+GGG + chr8_2:32460455-32460474 None:intergenic 35.0%
TGAGAGAATGAAGAAGATGA+AGG + chr8_2:32460456-32460475 None:intergenic 35.0%
TGGTAATTGACAAGCAAGAA+AGG + chr8_2:32460505-32460524 None:intergenic 35.0%
TGAGAATGGACAATGAAAGA+TGG + chr8_2:32460567-32460586 None:intergenic 35.0%
ATCTTCTTCGACTTCAACTA+TGG + chr8_2:32460601-32460620 None:intergenic 35.0%
TCTCTCTGTAATCTAGCATA+TGG - chr8_2:32460771-32460790 Msa1244380:CDS 35.0%
AAGCCTTAGTATCTTCTTTC+TGG - chr8_2:32460915-32460934 Msa1244380:intron 35.0%
CTGAAAAGAGTAATGATTGC+AGG - chr8_2:32461234-32461253 Msa1244380:intron 35.0%
AGTAATGATTGCAGGACATT+TGG - chr8_2:32461242-32461261 Msa1244380:intron 35.0%
! AAGTCACTAGATTTTTCCCT+CGG + chr8_2:32461384-32461403 None:intergenic 35.0%
! TGGACTGTTTTGTAAGTAGA+AGG - chr8_2:32461594-32461613 Msa1244380:intron 35.0%
GAAACGGACATATAGGTTAA+TGG - chr8_2:32461648-32461667 Msa1244380:intron 35.0%
AAGTTAGAGGCAAAACATCA+AGG - chr8_2:32461821-32461840 Msa1244380:intron 35.0%
AGTTAGAGGCAAAACATCAA+GGG - chr8_2:32461822-32461841 Msa1244380:intron 35.0%
GAGGAACAGGTATAAAAACA+GGG + chr8_2:32462017-32462036 None:intergenic 35.0%
AGAGGAACAGGTATAAAAAC+AGG + chr8_2:32462018-32462037 None:intergenic 35.0%
GAGTACTAGTATTTAGGAAG+AGG + chr8_2:32462108-32462127 None:intergenic 35.0%
TGTGACATTATTACAGCAGA+GGG + chr8_2:32462161-32462180 None:intergenic 35.0%
ATGTGACATTATTACAGCAG+AGG + chr8_2:32462162-32462181 None:intergenic 35.0%
AGCATAAAACTTCGTGAGAA+GGG + chr8_2:32462636-32462655 None:intergenic 35.0%
TAGCATAAAACTTCGTGAGA+AGG + chr8_2:32462637-32462656 None:intergenic 35.0%
!! TTCTCACGAAGTTTTATGCT+AGG - chr8_2:32462636-32462655 Msa1244380:CDS 35.0%
ACGATTGCTTTATGAAGTCT+TGG - chr8_2:32462685-32462704 Msa1244380:intron 35.0%
GCATGTTCAATAATTCGTTC+AGG + chr8_2:32462858-32462877 None:intergenic 35.0%
ATTATTGAACATGCTGTTCG+TGG - chr8_2:32462864-32462883 Msa1244380:intron 35.0%
GTACAGTAGACATGTTAAGA+TGG - chr8_2:32462944-32462963 Msa1244380:intron 35.0%
!!! GTACACGTTTTTGGTTTGAA+AGG - chr8_2:32463124-32463143 Msa1244380:intron 35.0%
!!! AGTACACCTTTTGGTTTGAA+AGG - chr8_2:32463159-32463178 Msa1244380:intron 35.0%
!!! GTACACCTTTTGGTTTGAAA+GGG - chr8_2:32463160-32463179 Msa1244380:intron 35.0%
TGAAGACAAAGTCTACTTTC+GGG + chr8_2:32463189-32463208 None:intergenic 35.0%
CTGAAGACAAAGTCTACTTT+CGG + chr8_2:32463190-32463209 None:intergenic 35.0%
AAAGTAGACTTTGTCTTCAG+CGG - chr8_2:32463190-32463209 Msa1244380:intron 35.0%
!! TCTACTAGTGGGTTAAATAG+TGG - chr8_2:32463244-32463263 Msa1244380:intron 35.0%
CATTATTCATTATGTGACGG+AGG + chr8_2:32463358-32463377 None:intergenic 35.0%
CTCCGTCACATAATGAATAA+TGG - chr8_2:32463356-32463375 Msa1244380:intron 35.0%
TATCACAACTTCGACTTTGA+AGG - chr8_2:32463406-32463425 Msa1244380:intron 35.0%
TAACTATCGAGGAAGGAATA+TGG + chr8_2:32463444-32463463 None:intergenic 35.0%
TTCTTCTATTGCATTCAGGT+TGG - chr8_2:32463588-32463607 Msa1244380:intron 35.0%
!!! AATTTTTGGTGGCCAAGATA+TGG + chr8_2:32463692-32463711 None:intergenic 35.0%
!! TTTAACCTAGCATTGATGAG+GGG + chr8_2:32463795-32463814 None:intergenic 35.0%
AGAGAAGAAATCTGATGACA+AGG + chr8_2:32463865-32463884 None:intergenic 35.0%
GAAAACAATTGTGAAGATGG+GGG + chr8_2:32463921-32463940 None:intergenic 35.0%
CGAAAACAATTGTGAAGATG+GGG + chr8_2:32463922-32463941 None:intergenic 35.0%
CCGAAAACAATTGTGAAGAT+GGG + chr8_2:32463923-32463942 None:intergenic 35.0%
! CCCATCTTCACAATTGTTTT+CGG - chr8_2:32463920-32463939 Msa1244380:intron 35.0%
! CCATCTTCACAATTGTTTTC+GGG - chr8_2:32463921-32463940 Msa1244380:intron 35.0%
TTTCTGCATTTCATCCATCT+TGG - chr8_2:32464055-32464074 Msa1244380:CDS 35.0%
GGATAAAAATTCAGCCAAGA+TGG + chr8_2:32464072-32464091 None:intergenic 35.0%
AGAGTTTCAGCATTACAAGA+TGG + chr8_2:32464093-32464112 None:intergenic 35.0%
! ATGTATAAACAGGGAGGTTT+TGG + chr8_2:32464299-32464318 None:intergenic 35.0%
ATTGTCATGTATAAACAGGG+AGG + chr8_2:32464305-32464324 None:intergenic 35.0%
AAACAACCAATGAACTTGAC+AGG + chr8_2:32464416-32464435 None:intergenic 35.0%
AGTTGAATCTACAGTAACCA+AGG - chr8_2:32464554-32464573 Msa1244380:intron 35.0%
GTTGAATCTACAGTAACCAA+GGG - chr8_2:32464555-32464574 Msa1244380:intron 35.0%
TCCCTAATTGGCAAATCAAT+GGG + chr8_2:32464663-32464682 None:intergenic 35.0%
ATCCCTAATTGGCAAATCAA+TGG + chr8_2:32464664-32464683 None:intergenic 35.0%
AGTTGCAGAGATAAAGACAT+AGG - chr8_2:32464694-32464713 Msa1244380:intron 35.0%
CAAGATTCAACAAAGAACCT+TGG + chr8_2:32464894-32464913 None:intergenic 35.0%
! CTCTCAATTTTATGGCTCAA+TGG + chr8_2:32465059-32465078 None:intergenic 35.0%
AGAGCTTGATGAGATCTATA+GGG - chr8_2:32465075-32465094 Msa1244380:five_prime_UTR 35.0%
TTGCTCTATCTTTACTGGGA+GGG + chr8_2:32460368-32460387 None:intergenic 40.0%
GTGCTTGCTCTATCTTTACT+GGG + chr8_2:32460372-32460391 None:intergenic 40.0%
TGTGCTTGCTCTATCTTTAC+TGG + chr8_2:32460373-32460392 None:intergenic 40.0%
! AAGGACATTGTTGCTGTTGA+TGG + chr8_2:32460405-32460424 None:intergenic 40.0%
TTTCATTGTCCATTCTCAGC+AGG - chr8_2:32460569-32460588 Msa1244380:three_prime_UTR 40.0%
AAGAGAGAGAGAAGTCATAC+CGG + chr8_2:32460666-32460685 None:intergenic 40.0%
AACCTGGTATCCAAAAGCTT+CGG - chr8_2:32461270-32461289 Msa1244380:intron 40.0%
! TTGACATGATCCGAAGCTTT+TGG + chr8_2:32461283-32461302 None:intergenic 40.0%
CATGGGTGCATTTGTAATTG+TGG - chr8_2:32461420-32461439 Msa1244380:intron 40.0%
TGACTTACCGCAAAAAGGAA+AGG + chr8_2:32461691-32461710 None:intergenic 40.0%
AGATGGAGATAAGCCCTATT+TGG - chr8_2:32461797-32461816 Msa1244380:intron 40.0%
GATGGAGATAAGCCCTATTT+GGG - chr8_2:32461798-32461817 Msa1244380:intron 40.0%
TGCCTCTAACTTCCCAAATA+GGG + chr8_2:32461813-32461832 None:intergenic 40.0%
TTGCCTCTAACTTCCCAAAT+AGG + chr8_2:32461814-32461833 None:intergenic 40.0%
!! TAATAAGTGCTGAGGCCTTT+GGG + chr8_2:32461864-32461883 None:intergenic 40.0%
!! TTAATAAGTGCTGAGGCCTT+TGG + chr8_2:32461865-32461884 None:intergenic 40.0%
AATAAGAAGACGGGTCAAGT+GGG + chr8_2:32461913-32461932 None:intergenic 40.0%
AAATAAGAAGACGGGTCAAG+TGG + chr8_2:32461914-32461933 None:intergenic 40.0%
CAAAAGGAGAATAGAGGAAC+AGG + chr8_2:32462030-32462049 None:intergenic 40.0%
! CTGTTCCTCTATTCTCCTTT+TGG - chr8_2:32462028-32462047 Msa1244380:intron 40.0%
ACTCTCCAAAAGGAGAATAG+AGG + chr8_2:32462036-32462055 None:intergenic 40.0%
GTATTTAGGAAGAGGAAGAG+TGG + chr8_2:32462100-32462119 None:intergenic 40.0%
TGTCTACTGTACAAGTCTCT+TGG + chr8_2:32462936-32462955 None:intergenic 40.0%
GGAAATGAATCTAGTACGTG+TGG + chr8_2:32463038-32463057 None:intergenic 40.0%
AACCAAAAACGTGTACTCTC+AGG + chr8_2:32463120-32463139 None:intergenic 40.0%
! CCAAAAGGTGTACTCTCTAA+GGG + chr8_2:32463153-32463172 None:intergenic 40.0%
! ACCAAAAGGTGTACTCTCTA+AGG + chr8_2:32463154-32463173 None:intergenic 40.0%
!! ATTCAAGCTTGGTAGTGGAA+AGG + chr8_2:32463225-32463244 None:intergenic 40.0%
AGTAGATTCAAGCTTGGTAG+TGG + chr8_2:32463230-32463249 None:intergenic 40.0%
ACCAAGCTTGAATCTACTAG+TGG - chr8_2:32463232-32463251 Msa1244380:intron 40.0%
CCAAGCTTGAATCTACTAGT+GGG - chr8_2:32463233-32463252 Msa1244380:intron 40.0%
!! ACTAGTGGGTTAAATAGTGG+TGG - chr8_2:32463247-32463266 Msa1244380:intron 40.0%
TGAATGGATGGGTCTTAAGA+AGG + chr8_2:32463285-32463304 None:intergenic 40.0%
AAGTTGTGATAATTGGGTCG+TGG + chr8_2:32463397-32463416 None:intergenic 40.0%
! TCGACTTTGAAGGTATGAGA+CGG - chr8_2:32463416-32463435 Msa1244380:intron 40.0%
TAGATGCAAGGTAACTATCG+AGG + chr8_2:32463455-32463474 None:intergenic 40.0%
AATGGAAAAGGAGAAATGGG+AGG + chr8_2:32463646-32463665 None:intergenic 40.0%
GAAGCCGGAAGTAATAACAA+TGG + chr8_2:32463664-32463683 None:intergenic 40.0%
! TGTTTTCTCCATCTTGACAG+TGG - chr8_2:32463712-32463731 Msa1244380:intron 40.0%
! GTTTTCTCCATCTTGACAGT+GGG - chr8_2:32463713-32463732 Msa1244380:intron 40.0%
GAAGAAATCTGATGACAAGG+TGG + chr8_2:32463862-32463881 None:intergenic 40.0%
CCCGAAAACAATTGTGAAGA+TGG + chr8_2:32463924-32463943 None:intergenic 40.0%
TTCTTCATTCTCCTCTGCAA+CGG - chr8_2:32463944-32463963 Msa1244380:intron 40.0%
GTAATGCTGAAACTCTCTTG+AGG - chr8_2:32464097-32464116 Msa1244380:CDS 40.0%
CTGAAACTCTCTTGAGGATT+GGG - chr8_2:32464103-32464122 Msa1244380:CDS 40.0%
!!! GAGGTTTTGGAGTTAGAAAG+CGG + chr8_2:32464286-32464305 None:intergenic 40.0%
TCTTGACCTGTCAAGTTCAT+TGG - chr8_2:32464407-32464426 Msa1244380:intron 40.0%
AATCTACAGTAACCAAGGGT+TGG - chr8_2:32464559-32464578 Msa1244380:intron 40.0%
!! AGCCCATTGATTTGCCAATT+AGG - chr8_2:32464658-32464677 Msa1244380:intron 40.0%
!! GCCCATTGATTTGCCAATTA+GGG - chr8_2:32464659-32464678 Msa1244380:intron 40.0%
! GGTGTATGTTGTTTAGAGCA+TGG - chr8_2:32464715-32464734 Msa1244380:intron 40.0%
AAGCTCGATGTTCAGTGAAA+TGG + chr8_2:32464781-32464800 None:intergenic 40.0%
GAGAGCTTGATGAGATCTAT+AGG - chr8_2:32465074-32465093 Msa1244380:five_prime_UTR 40.0%
GAGCTTGATGAGATCTATAG+GGG - chr8_2:32465076-32465095 Msa1244380:five_prime_UTR 40.0%
CTTGCTCTATCTTTACTGGG+AGG + chr8_2:32460369-32460388 None:intergenic 45.0%
GGTTCAACACAGATGAAACG+AGG + chr8_2:32460624-32460643 None:intergenic 45.0%
AGAGAGAGAGAAGTCATACC+GGG + chr8_2:32460665-32460684 None:intergenic 45.0%
! AGGACATTTGGAACACAACC+TGG - chr8_2:32461254-32461273 Msa1244380:intron 45.0%
! ATCCGAAGCTTTTGGATACC+AGG + chr8_2:32461275-32461294 None:intergenic 45.0%
ATGTCAACACAGCGAAAACG+TGG - chr8_2:32461296-32461315 Msa1244380:intron 45.0%
ACAATTGCGAATCACATCCG+AGG - chr8_2:32461364-32461383 Msa1244380:intron 45.0%
CAATTGCGAATCACATCCGA+GGG - chr8_2:32461365-32461384 Msa1244380:intron 45.0%
AGTGACTTATACACCCAGTG+TGG - chr8_2:32461396-32461415 Msa1244380:intron 45.0%
TTATACACCCAGTGTGGACA+TGG - chr8_2:32461402-32461421 Msa1244380:intron 45.0%
TATACACCCAGTGTGGACAT+GGG - chr8_2:32461403-32461422 Msa1244380:intron 45.0%
CATGGTGACTTACCGCAAAA+AGG + chr8_2:32461696-32461715 None:intergenic 45.0%
TGCGGTAAGTCACCATGAAA+TGG - chr8_2:32461699-32461718 Msa1244380:intron 45.0%
AGCCCTATTTGGGAAGTTAG+AGG - chr8_2:32461808-32461827 Msa1244380:intron 45.0%
ATGCGTCTCCTTATACCCAA+AGG - chr8_2:32461846-32461865 Msa1244380:intron 45.0%
CAGAAAAGGTTGCTGTCAGT+GGG - chr8_2:32462742-32462761 Msa1244380:intron 45.0%
TTGCTGTCAGTGGGAAAAAG+AGG - chr8_2:32462751-32462770 Msa1244380:intron 45.0%
! AGAGGACCCAGAAGCTTTAT+CGG - chr8_2:32462769-32462788 Msa1244380:intron 45.0%
TTCGTGGCATGCTTCCAAAA+GGG - chr8_2:32462880-32462899 Msa1244380:intron 45.0%
! GTTGAACTTACCCTCCCTTT+TGG + chr8_2:32462897-32462916 None:intergenic 45.0%
!! TGCCTGAGAGTACACGTTTT+TGG - chr8_2:32463115-32463134 Msa1244380:intron 45.0%
!! CCCTTAGAGAGTACACCTTT+TGG - chr8_2:32463150-32463169 Msa1244380:intron 45.0%
GGCATCCCTTTCAAACCAAA+AGG + chr8_2:32463168-32463187 None:intergenic 45.0%
!! AGCTTGGTAGTGGAAAGGAA+GGG + chr8_2:32463220-32463239 None:intergenic 45.0%
!! AAGCTTGGTAGTGGAAAGGA+AGG + chr8_2:32463221-32463240 None:intergenic 45.0%
CCCACTAGTAGATTCAAGCT+TGG + chr8_2:32463236-32463255 None:intergenic 45.0%
!! AGTGGGTTAAATAGTGGTGG+TGG - chr8_2:32463250-32463269 Msa1244380:intron 45.0%
! GTGGGTTAAATAGTGGTGGT+GGG - chr8_2:32463251-32463270 Msa1244380:intron 45.0%
ATGGATGGGTCTTAAGAAGG+TGG + chr8_2:32463282-32463301 None:intergenic 45.0%
CGACAACAAGGTGAATGGAT+GGG + chr8_2:32463296-32463315 None:intergenic 45.0%
! CCATCCATTCACCTTGTTGT+CGG - chr8_2:32463294-32463313 Msa1244380:intron 45.0%
GGGCATCAAAGTAGAAAGGT+TGG + chr8_2:32463337-32463356 None:intergenic 45.0%
TGTGATAATTGGGTCGTGGA+CGG + chr8_2:32463393-32463412 None:intergenic 45.0%
TGCAAGGTAACTATCGAGGA+AGG + chr8_2:32463451-32463470 None:intergenic 45.0%
! ATCAGATGGTGGTAGATGCA+AGG + chr8_2:32463467-32463486 None:intergenic 45.0%
TTGCATCTACCACCATCTGA+TGG - chr8_2:32463466-32463485 Msa1244380:intron 45.0%
CTACCACCATCTGATGGTTT+CGG - chr8_2:32463472-32463491 Msa1244380:intron 45.0%
GAAAGTCCGAAACCATCAGA+TGG + chr8_2:32463481-32463500 None:intergenic 45.0%
TGATGGTTTCGGACTTTCAG+TGG - chr8_2:32463483-32463502 Msa1244380:intron 45.0%
GCGGTTCTTCTATTGCATTC+AGG - chr8_2:32463584-32463603 Msa1244380:intron 45.0%
AATGCAACCCACTGTCAAGA+TGG + chr8_2:32463723-32463742 None:intergenic 45.0%
GAAGAGTGAAGATAGAGCAG+AGG + chr8_2:32463749-32463768 None:intergenic 45.0%
!! AGGGGTATCAGGAAAATGAC+AGG + chr8_2:32463777-32463796 None:intergenic 45.0%
!! TAGCATTGATGAGGGGTATC+AGG + chr8_2:32463788-32463807 None:intergenic 45.0%
TGATACCCCTCATCAATGCT+AGG - chr8_2:32463787-32463806 Msa1244380:intron 45.0%
GAGTATTCTGCAACCACTAC+CGG - chr8_2:32463981-32464000 Msa1244380:intron 45.0%
GCTGAAACTCTCTTGAGGAT+TGG - chr8_2:32464102-32464121 Msa1244380:CDS 45.0%
! CAGGTTGAGCAATTGTTAGG+AGG - chr8_2:32464126-32464145 Msa1244380:CDS 45.0%
AGAGCGACTCTATTGTGAAG+GGG + chr8_2:32464232-32464251 None:intergenic 45.0%
GAGAGCGACTCTATTGTGAA+GGG + chr8_2:32464233-32464252 None:intergenic 45.0%
AGAGAGCGACTCTATTGTGA+AGG + chr8_2:32464234-32464253 None:intergenic 45.0%
ACACGCCTGAAGGTTTATAG+CGG - chr8_2:32464609-32464628 Msa1244380:intron 45.0%
! GCAACAATGTCCTTGCTGTG+TGG - chr8_2:32460411-32460430 Msa1244380:three_prime_UTR 50.0%
! TGATGGTGAACCACACAGCA+AGG + chr8_2:32460424-32460443 None:intergenic 50.0%
GATGAAGGGAACGTCACTGA+TGG + chr8_2:32460441-32460460 None:intergenic 50.0%
!! TGGAAGTGTCCTGCTGAGAA+TGG + chr8_2:32460581-32460600 None:intergenic 50.0%
AATGCACCCATGTCCACACT+GGG + chr8_2:32461412-32461431 None:intergenic 50.0%
AAATGCACCCATGTCCACAC+TGG + chr8_2:32461413-32461432 None:intergenic 50.0%
GTCACCATGAAATGGCGTAG+AGG - chr8_2:32461707-32461726 Msa1244380:intron 50.0%
CATGAAATGGCGTAGAGGCT+CGG - chr8_2:32461712-32461731 Msa1244380:intron 50.0%
TGCTGAGGCCTTTGGGTATA+AGG + chr8_2:32461857-32461876 None:intergenic 50.0%
GCAGAAAAGGTTGCTGTCAG+TGG - chr8_2:32462741-32462760 Msa1244380:intron 50.0%
CAGGAATTCTGTTCTGCAGC+TGG + chr8_2:32462839-32462858 None:intergenic 50.0%
GTTCGTGGCATGCTTCCAAA+AGG - chr8_2:32462879-32462898 Msa1244380:intron 50.0%
TGGCATGCTTCCAAAAGGGA+GGG - chr8_2:32462884-32462903 Msa1244380:intron 50.0%
CCGACAACAAGGTGAATGGA+TGG + chr8_2:32463297-32463316 None:intergenic 50.0%
! AAGGTTTGGAGCCGACAACA+AGG + chr8_2:32463308-32463327 None:intergenic 50.0%
! AAGGTTGGCGTCGAAAGGTT+TGG + chr8_2:32463322-32463341 None:intergenic 50.0%
! GTAGAAAGGTTGGCGTCGAA+AGG + chr8_2:32463327-32463346 None:intergenic 50.0%
!! CGGAGGGCATCAAAGTAGAA+AGG + chr8_2:32463341-32463360 None:intergenic 50.0%
AGTCCGAAACCATCAGATGG+TGG + chr8_2:32463478-32463497 None:intergenic 50.0%
TGGTTTCGGACTTTCAGTGG+CGG - chr8_2:32463486-32463505 Msa1244380:intron 50.0%
GAAGAACCGCGAACGTGAAT+CGG + chr8_2:32463574-32463593 None:intergenic 50.0%
CAAGATATGGTGCAGGAAGC+CGG + chr8_2:32463679-32463698 None:intergenic 50.0%
GCACGTTAAATCCGTTGCAG+AGG + chr8_2:32463958-32463977 None:intergenic 50.0%
ATTGACAGGCCAGAGTAAGC+CGG + chr8_2:32464003-32464022 None:intergenic 50.0%
AACTCTCTTGAGGATTGGGC+AGG - chr8_2:32464107-32464126 Msa1244380:CDS 50.0%
! GGGCAGGTTGAGCAATTGTT+AGG - chr8_2:32464123-32464142 Msa1244380:CDS 50.0%
GGAGGAACCCAAGAACTGAA+TGG - chr8_2:32464144-32464163 Msa1244380:CDS 50.0%
AAGCTGCATACACCAACCCT+TGG + chr8_2:32464574-32464593 None:intergenic 50.0%
!! AAGGGTTGGTGTATGCAGCT+TGG - chr8_2:32464573-32464592 Msa1244380:intron 50.0%
GACTCTATTCACACGCCTGA+AGG - chr8_2:32464599-32464618 Msa1244380:intron 50.0%
GCGCTTCATGTGGATGATCT+GGG + chr8_2:32464635-32464654 None:intergenic 50.0%
TGCGCTTCATGTGGATGATC+TGG + chr8_2:32464636-32464655 None:intergenic 50.0%
TCATACCGGGCCTTGAAAGC+GGG + chr8_2:32460652-32460671 None:intergenic 55.0%
GTCATACCGGGCCTTGAAAG+CGG + chr8_2:32460653-32460672 None:intergenic 55.0%
CGAGCCTCTACGCCATTTCA+TGG + chr8_2:32461714-32461733 None:intergenic 55.0%
! GGACCCAGAAGCTTTATCGG+CGG - chr8_2:32462772-32462791 Msa1244380:intron 55.0%
GTGCCGCCGATAAAGCTTCT+GGG + chr8_2:32462778-32462797 None:intergenic 55.0%
AGTGCCGCCGATAAAGCTTC+TGG + chr8_2:32462779-32462798 None:intergenic 55.0%
! AAGCTTTATCGGCGGCACTC+AGG - chr8_2:32462780-32462799 Msa1244380:intron 55.0%
GTCTCGACTGTCATACCACC+AGG + chr8_2:32462810-32462829 None:intergenic 55.0%
GTGGCATGCTTCCAAAAGGG+AGG - chr8_2:32462883-32462902 Msa1244380:intron 55.0%
GGAGCCGACAACAAGGTGAA+TGG + chr8_2:32463301-32463320 None:intergenic 55.0%
CGGCTTCCTGCACCATATCT+TGG - chr8_2:32463677-32463696 Msa1244380:intron 55.0%
TGGTGGCCAAGATATGGTGC+AGG + chr8_2:32463686-32463705 None:intergenic 55.0%
!! CAACCACTACCGGCTTACTC+TGG - chr8_2:32463991-32464010 Msa1244380:intron 55.0%
GTTGGTGTATGCAGCTTGGC+AGG - chr8_2:32464577-32464596 Msa1244380:intron 55.0%
CTGGGCCGCTATAAACCTTC+AGG + chr8_2:32464617-32464636 None:intergenic 55.0%
GAACCTGAGCCCCGCTTTCA+AGG - chr8_2:32460639-32460658 Msa1244380:three_prime_UTR 60.0%
CATACCGGGCCTTGAAAGCG+GGG + chr8_2:32460651-32460670 None:intergenic 60.0%
AATCGGCACGGCGGAGAAGA+TGG + chr8_2:32463557-32463576 None:intergenic 60.0%
ACCGCGAACGTGAATCGGCA+CGG + chr8_2:32463569-32463588 None:intergenic 60.0%
AGGCCAGAGTAAGCCGGTAG+TGG + chr8_2:32463997-32464016 None:intergenic 60.0%
! ATGGGCTGCTGCGCTTCATG+TGG + chr8_2:32464645-32464664 None:intergenic 60.0%
TGAGCCCCGCTTTCAAGGCC+CGG - chr8_2:32460644-32460663 Msa1244380:three_prime_UTR 65.0%
GCGAACGTGAATCGGCACGG+CGG + chr8_2:32463566-32463585 None:intergenic 65.0%
!! GCCGTGCCGATTCACGTTCG+CGG - chr8_2:32463565-32463584 Msa1244380:intron 65.0%
GGGCCTTGAAAGCGGGGCTC+AGG + chr8_2:32460645-32460664 None:intergenic 70.0%
CGGCACTCAGGTCGACCTGG+TGG - chr8_2:32462792-32462811 Msa1244380:intron 70.0%
CGGCGGCACTCAGGTCGACC+TGG - chr8_2:32462789-32462808 Msa1244380:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 32460333 32465101 32460333 ID=Msa1244380;Name=Msa1244380
chr8_2 mRNA 32460333 32465101 32460333 ID=Msa1244380-mRNA-1;Parent=Msa1244380;Name=Msa1244380-mRNA-1;_AED=0.11;_eAED=0.11;_QI=84|1|1|1|0.66|0.75|4|394|240
chr8_2 exon 32460333 32460843 32460333 ID=Msa1244380-mRNA-1:exon:10652;Parent=Msa1244380-mRNA-1
chr8_2 exon 32462529 32462699 32462529 ID=Msa1244380-mRNA-1:exon:10651;Parent=Msa1244380-mRNA-1
chr8_2 exon 32463993 32464178 32463993 ID=Msa1244380-mRNA-1:exon:10650;Parent=Msa1244380-mRNA-1
chr8_2 exon 32464769 32465101 32464769 ID=Msa1244380-mRNA-1:exon:10649;Parent=Msa1244380-mRNA-1
chr8_2 five_prime_UTR 32465018 32465101 32465018 ID=Msa1244380-mRNA-1:five_prime_utr;Parent=Msa1244380-mRNA-1
chr8_2 CDS 32464769 32465017 32464769 ID=Msa1244380-mRNA-1:cds;Parent=Msa1244380-mRNA-1
chr8_2 CDS 32463993 32464178 32463993 ID=Msa1244380-mRNA-1:cds;Parent=Msa1244380-mRNA-1
chr8_2 CDS 32462529 32462699 32462529 ID=Msa1244380-mRNA-1:cds;Parent=Msa1244380-mRNA-1
chr8_2 CDS 32460727 32460843 32460727 ID=Msa1244380-mRNA-1:cds;Parent=Msa1244380-mRNA-1
chr8_2 three_prime_UTR 32460333 32460726 32460333 ID=Msa1244380-mRNA-1:three_prime_utr;Parent=Msa1244380-mRNA-1
Gene Sequence

>Msa1244380

ATGTCCTTGCTGTGTGGTTCACCATCAGTGACGTTCCCTTCATCTTCTTCATTCTCTCATCACAAGAATTCTACTTCTAAATCTTCCTTTCTTGCTTGTCAATTACCACTTTCAAACCTTTCATTATCATCTTCTTCAATTCGTACTCCATCTTTCATTGTCCATTCTCAGCAGGACACTTCCATAGTTGAAGTCGAAGAAGATCCTCGTTTCATCTGTGTTGAACCTGAGCCCCGCTTTCAAGGCCCGGACATTTGGAACACAACCTGGTATCCAAAAGCTTCGGATCATGTCAACACAGCGAAAACGTGGTATATTGTTGATGCTACAGATAAAATTCTTGGAAGACTAGCATCAACAATTGCGAATCACATCCGAGGGAAAAATCTAGTGACTTATACACCCAGTGTGGACATGGGTGCATTTGTAATTGTGATAAATGCAGAAAAGGTTGCTGTCAGTGGGAAAAAGAGGACCCAGAAGCTTTATCGGCGGCACTCAGGTCGACCTGGTGGTATGACAGTCGAGACATTTGACCAGCTGCAGAACAGAATTCCTGAACGAATTATTGAACATGCTGTTCGTGGCATGCTTCCAAAAGGGAGGCTTGGCAGGACTCTATTCACACGCCTGAAGGTTTATAGCGGCCCAGATCATCCACATGAAGCGCAGCAGCCCATTGATTTGCCAATTAGGGATAAGAGAATACAGTTGCAGAGATAA

Protein sequence

>Msa1244380

MSLLCGSPSVTFPSSSSFSHHKNSTSKSSFLACQLPLSNLSLSSSSIRTPSFIVHSQQDTSIVEVEEDPRFICVEPEPRFQGPDIWNTTWYPKASDHVNTAKTWYIVDATDKILGRLASTIANHIRGKNLVTYTPSVDMGAFVIVINAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQNRIPERIIEHAVRGMLPKGRLGRTLFTRLKVYSGPDHPHEAQQPIDLPIRDKRIQLQR*