AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1292700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292700 MtrunA17_Chr8g0367931 99.205 503 4 0 242 744 72 574 0.0 999
Msa1292700 MtrunA17_Chr2g0315941 53.636 220 86 5 34 241 49 264 4.36e-66 219
Msa1292700 MtrunA17_Chr8g0367691 52.273 220 88 6 33 240 49 263 6.58e-62 208
Msa1292700 MtrunA17_Chr3g0133181 43.333 210 85 4 50 241 77 270 6.15e-41 151
Msa1292700 MtrunA17_Chr5g0412501 43.069 202 97 3 50 241 75 268 4.99e-39 145
Msa1292700 MtrunA17_Chr8g0357721 47.799 159 49 4 62 219 14 139 1.37e-38 139
Msa1292700 MtrunA17_Chr5g0404271 36.893 206 109 5 53 245 99 296 2.46e-37 141
Msa1292700 MtrunA17_Chr1g0188441 38.500 200 91 5 51 241 7 183 3.24e-37 137
Msa1292700 MtrunA17_Chr5g0427051 42.791 215 95 6 50 241 55 264 4.61e-37 140
Msa1292700 MtrunA17_Chr7g0217231 37.619 210 106 4 50 245 85 283 1.13e-34 135
Msa1292700 MtrunA17_Chr6g0453231 37.931 203 100 6 53 241 91 281 6.79e-31 124
Msa1292700 MtrunA17_Chr8g0357741 61.053 95 32 3 147 240 2 92 4.14e-30 114
Msa1292700 MtrunA17_Chr4g0076821 55.556 72 27 1 182 253 284 350 5.05e-20 92.8
Msa1292700 MtrunA17_Chr4g0076821 56.140 57 25 0 53 109 113 169 3.62e-17 84.0
Msa1292700 MtrunA17_Chr3g0092371 47.059 68 35 1 50 116 17 84 4.38e-16 73.9
Msa1292700 MtrunA17_Chr8g0361671 57.895 57 22 1 48 102 59 115 5.16e-14 74.7
Msa1292700 MtrunA17_Chr8g0361671 50.847 59 29 0 182 240 271 329 1.07e-13 73.6
Msa1292700 MtrunA17_Chr4g0060731 48.438 64 27 3 42 104 15 73 6.41e-14 67.4
Msa1292700 MtrunA17_Chr8g0349871 55.769 52 23 0 183 234 14 65 4.57e-13 64.7
Msa1292700 MtrunA17_Chr6g0479901 50.000 58 27 2 53 109 19 75 5.99e-13 67.8
Msa1292700 MtrunA17_Chr6g0479901 43.333 60 33 1 182 240 101 160 2.16e-12 66.2
Msa1292700 MtrunA17_Chr6g0453221 50.980 51 21 1 51 101 19 65 1.01e-12 64.3
Msa1292700 MtrunA17_Chr8g0349881 63.415 41 15 0 183 223 38 78 3.02e-12 62.8
Msa1292700 MtrunA17_Chr8g0349921 65.000 40 14 0 184 223 39 78 5.11e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292700 AT3G26570.1 78.558 513 100 4 242 744 101 613 0.0 765
Msa1292700 AT3G26570.2 78.558 513 100 4 242 744 75 587 0.0 765
Msa1292700 AT4G24660.2 41.538 195 89 4 51 243 47 218 2.33e-43 157
Msa1292700 AT4G24660.1 41.451 193 88 4 51 241 47 216 1.98e-42 154
Msa1292700 AT2G02540.2 37.443 219 87 7 51 241 85 281 2.16e-39 148
Msa1292700 AT2G02540.1 37.443 219 87 7 51 241 85 281 2.16e-39 148
Msa1292700 AT1G14440.1 39.394 198 99 5 51 238 88 274 1.88e-36 140
Msa1292700 AT1G14440.2 39.394 198 99 5 51 238 88 274 1.88e-36 140
Msa1292700 AT2G18350.1 39.362 188 101 3 51 238 80 254 1.96e-35 135
Msa1292700 AT5G65410.1 39.062 192 100 4 52 241 74 250 1.67e-34 133
Msa1292700 AT1G69600.1 37.788 217 101 8 51 253 29 225 5.39e-32 125
Msa1292700 AT3G50890.1 34.171 199 105 6 53 242 60 241 7.27e-31 122
Msa1292700 AT5G15210.1 34.804 204 111 6 53 249 56 244 1.79e-29 118
Msa1292700 AT5G60480.1 37.500 192 95 5 51 239 35 204 5.02e-29 115
Msa1292700 AT3G28920.1 31.760 233 116 5 51 256 50 266 2.18e-25 107
Msa1292700 AT5G42780.1 31.250 192 108 3 52 238 63 235 6.71e-23 99.0
Msa1292700 AT1G74660.2 64.151 53 19 0 50 102 36 88 1.01e-19 85.1
Msa1292700 AT1G74660.1 64.151 53 19 0 50 102 36 88 1.17e-19 85.1
Msa1292700 AT1G75240.1 59.677 62 24 1 50 110 73 134 1.63e-18 87.4
Msa1292700 AT1G75240.1 55.000 60 27 0 179 238 237 296 3.61e-16 80.5
Msa1292700 AT3G28917.1 57.407 54 22 1 50 102 30 83 3.00e-16 75.5
Msa1292700 AT5G39760.1 46.575 73 39 0 181 253 199 271 1.80e-15 79.0
Msa1292700 AT1G18835.1 57.407 54 18 2 50 102 23 72 6.68e-15 71.2

Find 175 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAGGGTTTGGCCTAGTTTA+TGG 0.168453 8_3:+49224944 Msa1292700:CDS
GCTGCAGCTGCTGCTTGTCC+TGG 0.170623 8_3:-49225473 None:intergenic
TGAAATAATTTAGCAATCTT+TGG 0.197348 8_3:+49226481 Msa1292700:three_prime_UTR
TGTTTATTTGTGGTGAAATT+TGG 0.201876 8_3:+49226347 Msa1292700:three_prime_UTR
CCTTTGTTTATGACATCTTT+AGG 0.248421 8_3:+49223220 Msa1292700:CDS
GCACCAATTGCTGTATTTCT+TGG 0.260924 8_3:+49225497 Msa1292700:CDS
CGAGATAGGTGTTAGATCTT+TGG 0.261382 8_3:-49219388 None:intergenic
GAGGTGCTGGAGCTGTATTT+TGG 0.263063 8_3:+49224966 Msa1292700:CDS
TCCGGTTGGCGCTACCTTAT+CGG 0.265923 8_3:+49226192 Msa1292700:CDS
GAAGAATATCATACAAATTC+TGG 0.266489 8_3:+49219180 Msa1292700:CDS
ATGCAGTTTGCATCATATTA+TGG 0.273189 8_3:+49224881 Msa1292700:intron
TGGAACCGTCGGGGCTTTCC+TGG 0.279990 8_3:+49225595 Msa1292700:CDS
TGCTGCTGGTACTTGGTTAC+AGG 0.284265 8_3:+49223534 Msa1292700:CDS
GTTCTTGCTTGGGGTGGATT+TGG 0.288654 8_3:+49225908 Msa1292700:CDS
AGCTTCTTCTCTGATATTAC+AGG 0.298759 8_3:+49225701 Msa1292700:CDS
CAGAGAAGAAGCTTATGTTT+TGG 0.304120 8_3:-49225691 None:intergenic
CACTTGCTGCTGCTGGTACT+TGG 0.307974 8_3:+49223527 Msa1292700:CDS
CTGCAGCTGCTGCTTGTCCT+GGG 0.310215 8_3:-49225472 None:intergenic
GAAGATGTCCGAGTTGTTTA+CGG 0.312285 8_3:-49225631 None:intergenic
GCTGTATTTCTTGGCGTAAC+TGG 0.314923 8_3:+49225506 Msa1292700:CDS
GGTGGATTTGGAATTGTTGC+AGG 0.320121 8_3:+49225920 Msa1292700:CDS
AAAGCTAGGGCTACCGATAT+CGG 0.324358 8_3:+49226060 Msa1292700:CDS
TTCATGGGCTGTTACTATTC+CGG 0.329561 8_3:+49226174 Msa1292700:CDS
AGCCGAGTTTGCAGCTGCTT+CGG 0.345764 8_3:+49226021 Msa1292700:CDS
TGAAAATTCAGAGAAAATAT+TGG 0.350023 8_3:+49226515 Msa1292700:three_prime_UTR
TCCGATTGATGTTCTTGCTT+GGG 0.350128 8_3:+49225898 Msa1292700:CDS
TGAAGGAGATTTGTGCTTCA+TGG 0.351583 8_3:+49226158 Msa1292700:CDS
GGCCTAGTTTATGGAGGTGC+TGG 0.361505 8_3:+49224953 Msa1292700:CDS
AATTTAACATGGTGAACCTT+TGG 0.362643 8_3:+49226672 Msa1292700:three_prime_UTR
CTTGGTGCTCTGGTTGTAGA+AGG 0.364414 8_3:-49219444 None:intergenic
GTTCTGTTTGCTTCAAAGCT+AGG 0.364958 8_3:+49226046 Msa1292700:CDS
CAAGTCAAATACTCCACATT+TGG 0.370050 8_3:+49225658 Msa1292700:CDS
CTTTCTTCACTTGCTGCTGC+TGG 0.370685 8_3:+49223520 Msa1292700:CDS
AAAACTCGCAACAACCATCT+AGG 0.381472 8_3:-49219272 None:intergenic
ACTCAACTTGAAATAGTTTA+CGG 0.382692 8_3:+49225734 Msa1292700:CDS
TTCCGATTGATGTTCTTGCT+TGG 0.384604 8_3:+49225897 Msa1292700:CDS
GGTACTGATGGTGGTGGAGA+AGG 0.393432 8_3:+49219576 Msa1292700:CDS
CGTCGTGCCCCTTGGTGCTC+TGG 0.393789 8_3:-49219454 None:intergenic
AATGCCTGGCTTAGAGCTAT+TGG 0.394818 8_3:-49225566 None:intergenic
TAGAAGGAGTTGGTGCTTGA+GGG 0.396879 8_3:-49219428 None:intergenic
ACCGATAAGGTAGCGCCAAC+CGG 0.397097 8_3:-49226193 None:intergenic
TATAGAGTTATAGCTACAAT+TGG 0.400829 8_3:+49225959 Msa1292700:CDS
ACGCTAGTTGGTGCAGTAAT+GGG 0.404475 8_3:+49226091 Msa1292700:CDS
GACATCTTTAGGACAAGGTT+TGG 0.406475 8_3:+49223231 Msa1292700:CDS
TGTTTGGATTCTATATGGCT+TGG 0.409298 8_3:+49223290 Msa1292700:CDS
TAGCAATCTTTGGACTTTGA+AGG 0.411347 8_3:+49226491 Msa1292700:three_prime_UTR
CATTAGCTTGTGGAACCGTC+GGG 0.412945 8_3:+49225585 Msa1292700:CDS
TAGTTTCAGTGTAAATTTCA+AGG 0.415702 8_3:+49219209 Msa1292700:CDS
CTAAGAAGAGGTTCAGGTCT+AGG 0.417148 8_3:+49219610 Msa1292700:CDS
ATTGGAGGTTATGCCCTAGA+TGG 0.417532 8_3:+49219258 Msa1292700:CDS
TGAGATTAACTGTTTATTTG+TGG 0.421107 8_3:+49226337 Msa1292700:three_prime_UTR
TAACGATGAAGTATCAGAAA+TGG 0.426657 8_3:+49223123 Msa1292700:CDS
ATTTCAAGTTGAGTACCCTT+TGG 0.427540 8_3:-49225725 None:intergenic
CACAATCTAAGAAGAGGTTC+AGG 0.427926 8_3:+49219604 Msa1292700:CDS
AAGAACCATGCTTCTAGCAT+TGG 0.427928 8_3:+49219240 Msa1292700:CDS
TTCTGTTTGCTTCAAAGCTA+GGG 0.430322 8_3:+49226047 Msa1292700:CDS
AAGCTAGGGCTACCGATATC+GGG 0.444063 8_3:+49226061 Msa1292700:CDS
TCAGTACCACCACCGTTGAT+AGG 0.444489 8_3:-49219561 None:intergenic
GTAGAAGGAGTTGGTGCTTG+AGG 0.446152 8_3:-49219429 None:intergenic
CTGAAGAATCTTTCAACAGA+TGG 0.447585 8_3:-49226611 None:intergenic
AAGACAAAGATGTTATCATA+TGG 0.454924 8_3:+49223259 Msa1292700:CDS
TTGGAAAACTCTTGCTAAGC+GGG 0.455919 8_3:-49225547 None:intergenic
ACGCCAAGAAATACAGCAAT+TGG 0.457920 8_3:-49225500 None:intergenic
AACCATGCTTCTAGCATTGG+AGG 0.458109 8_3:+49219243 Msa1292700:CDS
GCATTAGCTTGTGGAACCGT+CGG 0.458457 8_3:+49225584 Msa1292700:CDS
GTGGGAGCAATGGTAGGGTT+TGG 0.458744 8_3:+49224932 Msa1292700:CDS
TACATCTACCTTTGTCTGAA+GGG 0.459664 8_3:+49219487 Msa1292700:CDS
GTACTGATGGTGGTGGAGAA+GGG 0.461446 8_3:+49219577 Msa1292700:CDS
AGCGTATGTGTCCCCGATAT+CGG 0.461807 8_3:-49226073 None:intergenic
CTACATCTACCTTTGTCTGA+AGG 0.464986 8_3:+49219486 Msa1292700:CDS
ATCTACTACACATTGTATAG+TGG 0.467258 8_3:+49224913 Msa1292700:CDS
TTCTATATGGCTTGGAACAT+TGG 0.470907 8_3:+49223298 Msa1292700:CDS
AACGATGTCTCCAACGCAAT+AGG 0.473437 8_3:+49225815 Msa1292700:CDS
TACGCTAGTTGGTGCAGTAA+TGG 0.477730 8_3:+49226090 Msa1292700:CDS
ATTCTACAAGGCGCAGCAAA+AGG 0.482474 8_3:+49225860 Msa1292700:CDS
CATGGAGCACTAAACGAGAT+AGG 0.491077 8_3:-49219402 None:intergenic
GATCTGGTGCATTGTCACTT+AGG 0.491977 8_3:+49223359 Msa1292700:CDS
CCCCAAGCAAGAACATCAAT+CGG 0.492615 8_3:-49225899 None:intergenic
CAACATGCTGCAACAGAAAA+CGG 0.492938 8_3:+49223094 Msa1292700:CDS
GATACTGCTGCTCCCAATAG+TGG 0.498114 8_3:-49225028 None:intergenic
TCGGCTGCAAATCCTCTTGT+CGG 0.500344 8_3:-49226004 None:intergenic
TGTATAGTGGGAGCAATGGT+AGG 0.500362 8_3:+49224926 Msa1292700:CDS
CTCTGATATTACAGGTCCAA+AGG 0.503091 8_3:+49225709 Msa1292700:CDS
GTTGGTGCAGTAATGGGAGT+TGG 0.505333 8_3:+49226097 Msa1292700:CDS
TGGGCTGTTACTATTCCGGT+TGG 0.509032 8_3:+49226178 Msa1292700:CDS
CTCCAACGCAATAGGTCCAT+TGG 0.509756 8_3:+49225823 Msa1292700:CDS
CAGCAATTGTTTCCTTCCTG+TGG 0.511135 8_3:-49219362 None:intergenic
TGTGGTGAAATTTGGAGAAG+AGG 0.513040 8_3:+49226355 Msa1292700:three_prime_UTR
GAAGGAGATTTGTGCTTCAT+GGG 0.513318 8_3:+49226159 Msa1292700:CDS
CAAAATAACAAGCATACCCT+TGG 0.513787 8_3:+49219771 Msa1292700:CDS
CAAAGGTAGATGTAGAGAAC+TGG 0.513796 8_3:-49219478 None:intergenic
TACGGATAGTTCTGTTGACC+AGG 0.515812 8_3:-49225613 None:intergenic
ATGGGAACTTCAGTTGGATC+TGG 0.518532 8_3:+49223343 Msa1292700:CDS
TCAAGCGTTTGCATGTTAAG+TGG 0.523492 8_3:+49219057 None:intergenic
CGGTTCCACAAGCTAATGCC+TGG 0.524860 8_3:-49225580 None:intergenic
AACCGAAGCAGCTGCAAACT+CGG 0.527157 8_3:-49226023 None:intergenic
AATGCAATGGGAACTTCAGT+TGG 0.529327 8_3:+49223337 Msa1292700:CDS
TTGTGTACAAATGCATTCGA+AGG 0.531580 8_3:+49225056 Msa1292700:CDS
TTCTACAACCAGAGCACCAA+GGG 0.534569 8_3:+49219446 Msa1292700:CDS
CTCCAGCACCTCCATAAACT+AGG 0.535656 8_3:-49224955 None:intergenic
CCACGTGTAAATCACCGATA+AGG 0.535689 8_3:-49226206 None:intergenic
CAAGCGTTTGCATGTTAAGT+GGG 0.536716 8_3:+49219058 None:intergenic
CTAAGCCAGGCATTAGCTTG+TGG 0.542312 8_3:+49225575 Msa1292700:CDS
AATGATGTTGCAAATGCAAT+GGG 0.542803 8_3:+49223325 Msa1292700:CDS
ACATCTACCTTTGTCTGAAG+GGG 0.543744 8_3:+49219488 Msa1292700:CDS
TAGAACAGGTTATATGTATG+TGG 0.544813 8_3:+49226283 Msa1292700:three_prime_UTR
AGTTTGCATCATATTATGGT+TGG 0.546165 8_3:+49224885 Msa1292700:intron
AGGTTGGAAGATTCAGAAGA+AGG 0.548691 8_3:+49219680 Msa1292700:CDS
TGCATCATATTATGGTTGGC+CGG 0.550011 8_3:+49224889 Msa1292700:CDS
CCGATTGATGTTCTTGCTTG+GGG 0.552108 8_3:+49225899 Msa1292700:CDS
ATTGATGTTCTTGCTTGGGG+TGG 0.555893 8_3:+49225902 Msa1292700:CDS
TGTTTCATGTCATTTGCTCA+CGG 0.557308 8_3:+49225788 Msa1292700:CDS
TCGGGGACACATACGCTAGT+TGG 0.559783 8_3:+49226079 Msa1292700:CDS
GTCTAGATCTTAAAAGCCAA+AGG 0.566254 8_3:-49226688 None:intergenic
TAATGACAGCGAAGAAGAGA+TGG 0.566350 8_3:+49219092 Msa1292700:CDS
TCTGATATTACAGGTCCAAA+GGG 0.566683 8_3:+49225710 Msa1292700:CDS
GGGTTTGGCCTAGTTTATGG+AGG 0.570594 8_3:+49224947 Msa1292700:CDS
TGTGACTAGTACAATGCAGA+AGG 0.570955 8_3:+49223441 Msa1292700:CDS
GTCGAGCCTATCAACGGTGG+TGG 0.571328 8_3:+49219555 Msa1292700:CDS
TACAATTGGAAAGAAAATAA+CGG 0.573343 8_3:+49225973 Msa1292700:CDS
GTTGGTGCTTGAGGGAGGCA+TGG 0.574455 8_3:-49219420 None:intergenic
AAACTCGCAACAACCATCTA+GGG 0.578668 8_3:-49219271 None:intergenic
TCTACTACACATTGTATAGT+GGG 0.579166 8_3:+49224914 Msa1292700:CDS
ATCAACGGTGGTGGTACTGA+TGG 0.580073 8_3:+49219564 Msa1292700:CDS
TGTGTTGACAGCTGCAGTGT+TGG 0.582448 8_3:+49223387 Msa1292700:CDS
CCTAAAGATGTCATAAACAA+AGG 0.582464 8_3:-49223220 None:intergenic
GTATAGTGGGAGCAATGGTA+GGG 0.585259 8_3:+49224927 Msa1292700:CDS
CCTTATCGGTGATTTACACG+TGG 0.586036 8_3:+49226206 Msa1292700:CDS
TTGGAGAAGAGGATCGGCAA+GGG 0.595338 8_3:+49226366 Msa1292700:three_prime_UTR
GCTCTGGTTGTAGAAGGAGT+TGG 0.596322 8_3:-49219438 None:intergenic
TAATGATGTTGCAAATGCAA+TGG 0.596839 8_3:+49223324 Msa1292700:CDS
TATAACAATATGTATAGTAA+TGG 0.596864 8_3:+49223183 Msa1292700:CDS
ATACAATGTGTAGTAGATAC+CGG 0.597031 8_3:-49224908 None:intergenic
ACATTGTATAGTGGGAGCAA+TGG 0.597997 8_3:+49224922 Msa1292700:CDS
ATGGGAGTTGGATTCGCAAG+AGG 0.602660 8_3:+49226109 Msa1292700:CDS
GCTAAGCGGGAAAGCAGCAA+AGG 0.603172 8_3:-49225534 None:intergenic
ATAGCTAACGCACCGGCCAA+TGG 0.604194 8_3:-49225839 None:intergenic
AAACAGTTAATCTCAAAAGA+CGG 0.605053 8_3:-49226329 None:intergenic
TGAAATTTGGAGAAGAGGAT+CGG 0.607910 8_3:+49226360 Msa1292700:three_prime_UTR
AACCTCCAATGCTAGAAGCA+TGG 0.609063 8_3:-49219245 None:intergenic
AACGCAATAGGTCCATTGGC+CGG 0.610227 8_3:+49225827 Msa1292700:CDS
GGTCTTCACAATCTAAGAAG+AGG 0.612128 8_3:+49219598 Msa1292700:CDS
TGGCAAGAGTGATTTCGTCA+TGG 0.615368 8_3:+49224996 Msa1292700:CDS
CAGCGAAGAAGAGATGGTGA+TGG 0.618618 8_3:+49219098 Msa1292700:CDS
TCATAGAAACTTCCACAGGA+AGG 0.619093 8_3:+49219350 Msa1292700:CDS
GGTGGTGGTACTGATGGTGG+TGG 0.619142 8_3:+49219570 Msa1292700:CDS
TGTTGCAGGACTAATGATGT+GGG 0.619425 8_3:+49225934 Msa1292700:CDS
TGTGTACAAATGCATTCGAA+GGG 0.620961 8_3:+49225057 Msa1292700:CDS
GGTGCGTTAGCTATTCTACA+AGG 0.621378 8_3:+49225848 Msa1292700:CDS
AGAACTATCCGTAAACAACT+CGG 0.621558 8_3:+49225623 Msa1292700:CDS
TTTATGACATCTTTAGGACA+AGG 0.625714 8_3:+49223226 Msa1292700:CDS
AACGGTGGTGGTACTGATGG+TGG 0.628063 8_3:+49219567 Msa1292700:CDS
CTTCTACAACCAGAGCACCA+AGG 0.630837 8_3:+49219445 Msa1292700:CDS
ACGGAACTTACACCGACAAG+AGG 0.634990 8_3:+49225992 Msa1292700:CDS
TTGTTGCAGGACTAATGATG+TGG 0.637904 8_3:+49225933 Msa1292700:CDS
CATGTTGTCGAGCCTATCAA+CGG 0.638308 8_3:+49219549 Msa1292700:CDS
GAAGGATGAGAATGTTGTCG+AGG 0.641523 8_3:+49219698 Msa1292700:CDS
AAGGAGTTGGTGCTTGAGGG+AGG 0.642940 8_3:-49219425 None:intergenic
GTTGACCAGGAAAGCCCCGA+CGG 0.645332 8_3:-49225600 None:intergenic
TTCATGTCATTTGCTCACGG+TGG 0.649798 8_3:+49225791 Msa1292700:CDS
TTTGGAGAAGAGGATCGGCA+AGG 0.650366 8_3:+49226365 Msa1292700:three_prime_UTR
ATTGTCATAGAAACTTCCAC+AGG 0.652079 8_3:+49219346 Msa1292700:CDS
ATTAGCTTGTGGAACCGTCG+GGG 0.654249 8_3:+49225586 Msa1292700:CDS
TGTTAGATCAGAAACAGTGA+AGG 0.658218 8_3:+49226141 Msa1292700:CDS
AGCTAGGGCTACCGATATCG+GGG 0.659525 8_3:+49226062 Msa1292700:CDS
TGGTTTCTATGTGAAGACTG+TGG 0.659744 8_3:+49226406 Msa1292700:three_prime_UTR
GTGACTAGTACAATGCAGAA+GGG 0.662462 8_3:+49223442 Msa1292700:CDS
CATCTACCTTTGTCTGAAGG+GGG 0.665676 8_3:+49219489 Msa1292700:CDS
GTATACAGTGCAAGTAACCC+AGG 0.669512 8_3:+49225455 Msa1292700:CDS
TTGTAGAATAGCTAACGCAC+CGG 0.670355 8_3:-49225846 None:intergenic
ATTGGAAAACTCTTGCTAAG+CGG 0.681979 8_3:-49225548 None:intergenic
GTTGTCGAGCCTATCAACGG+TGG 0.713144 8_3:+49219552 Msa1292700:CDS
GTTGCAGGACTAATGATGTG+GGG 0.740601 8_3:+49225935 Msa1292700:CDS
TCTACAACCAGAGCACCAAG+GGG 0.762032 8_3:+49219447 Msa1292700:CDS
AGGTTCACATATGAACAACG+TGG 0.797177 8_3:+49219630 Msa1292700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTAATTTTTTTA+GGG - chr8_3:49219804-49219823 None:intergenic 0.0%
!!! TTATTATTATTAATTTTTTT+AGG - chr8_3:49219805-49219824 None:intergenic 0.0%
!!! ATGGATTTTTTTTTTTTTTA+AGG + chr8_3:49220040-49220059 Msa1292700:intron 10.0%
!!! AAAAAAACAAATTTAGTTTA+TGG + chr8_3:49220999-49221018 Msa1292700:intron 10.0%
!!! ATTTTTAACAATTTTTTCAA+AGG + chr8_3:49221826-49221845 Msa1292700:intron 10.0%
!!! ATAATATTTTTATGATACAA+AGG + chr8_3:49222012-49222031 Msa1292700:intron 10.0%
!! TTAATGTGTAAATTAAAAAT+TGG - chr8_3:49223908-49223927 None:intergenic 10.0%
!!! TTTTTTTTTTTAAGGAACTA+TGG + chr8_3:49220048-49220067 Msa1292700:intron 15.0%
!! ATTAATAATATATAGGATGA+AGG - chr8_3:49220707-49220726 None:intergenic 15.0%
!! ATAACAAAACAAAAAAAGTT+TGG + chr8_3:49220735-49220754 Msa1292700:intron 15.0%
!! TAACAAAACAAAAAAAGTTT+GGG + chr8_3:49220736-49220755 Msa1292700:intron 15.0%
!!! ATATAAAGATGTTTTAGAAA+GGG - chr8_3:49221251-49221270 None:intergenic 15.0%
!!! TATATAAAGATGTTTTAGAA+AGG - chr8_3:49221252-49221271 None:intergenic 15.0%
!! AAAAAAATAAAGAATTACAG+CGG - chr8_3:49221283-49221302 None:intergenic 15.0%
!! AAAATAAGTATAAGTTATAG+TGG - chr8_3:49221623-49221642 None:intergenic 15.0%
!! ATATCAAATAAAATCAAAGA+AGG - chr8_3:49221681-49221700 None:intergenic 15.0%
!! TGTAAAAAAAAATGCAATAA+CGG + chr8_3:49222069-49222088 Msa1292700:intron 15.0%
!!! AAAATTACATATTTTCGAAT+TGG + chr8_3:49222172-49222191 Msa1292700:intron 15.0%
!! CAAATACAAAAATATAAACA+TGG + chr8_3:49222322-49222341 Msa1292700:intron 15.0%
!!! TTTTTATATGGTTGAAATTT+TGG - chr8_3:49222478-49222497 None:intergenic 15.0%
!!! TTGAAATTGATGTTTTTATA+TGG - chr8_3:49222490-49222509 None:intergenic 15.0%
!! TATAACAATATGTATAGTAA+TGG + chr8_3:49223183-49223202 Msa1292700:CDS 15.0%
!!! ATGTCATTATCTTTTATTTT+TGG + chr8_3:49224765-49224784 Msa1292700:intron 15.0%
!! ACAATTCAATGAATTTAATT+AGG + chr8_3:49224841-49224860 Msa1292700:intron 15.0%
!!! TATCTTTTGATAATTTAACA+TGG + chr8_3:49226661-49226680 Msa1292700:three_prime_UTR 15.0%
!! TCAAGTTTGATCAATAATTT+CGG + chr8_3:49220133-49220152 Msa1292700:intron 20.0%
!!! ATTGGTTTTATTTTAACAGT+AGG + chr8_3:49220192-49220211 Msa1292700:intron 20.0%
!! AATAACAATCTACTTTACAT+GGG + chr8_3:49220339-49220358 Msa1292700:intron 20.0%
!! GACTTCAAAACATTATATTA+TGG - chr8_3:49220643-49220662 None:intergenic 20.0%
!! AACAAAACAAAAAAAGTTTG+GGG + chr8_3:49220737-49220756 Msa1292700:intron 20.0%
!!! ATCATGAAAGTTTTATGTTT+GGG - chr8_3:49220896-49220915 None:intergenic 20.0%
!!! TTTGTTTTTTTATTATTCGG+AGG - chr8_3:49220990-49221009 None:intergenic 20.0%
!!! TTGTAAAATAAAAAAGGTGT+AGG + chr8_3:49221164-49221183 Msa1292700:intron 20.0%
!!! TGTAAAATAAAAAAGGTGTA+GGG + chr8_3:49221165-49221184 Msa1292700:intron 20.0%
!! ATATAACAAAAATCGTAAAG+AGG - chr8_3:49221223-49221242 None:intergenic 20.0%
!!! TATAAAGATGTTTTAGAAAG+GGG - chr8_3:49221250-49221269 None:intergenic 20.0%
!! AAAAAATAAAGAATTACAGC+GGG - chr8_3:49221282-49221301 None:intergenic 20.0%
!! AGAAGAAAATAAACATCATA+CGG + chr8_3:49221540-49221559 Msa1292700:intron 20.0%
!!! CTAATATACAAAACTCATTT+TGG - chr8_3:49222122-49222141 None:intergenic 20.0%
!!! CCATGTTTATTTTTTTGATA+AGG - chr8_3:49222351-49222370 None:intergenic 20.0%
!! CCTTATCAAAAAAATAAACA+TGG + chr8_3:49222348-49222367 Msa1292700:intron 20.0%
!!! TGATGTTTTTTTTGTATGTT+TGG - chr8_3:49222852-49222871 None:intergenic 20.0%
!!! GTATTGAATTTGTTAACAAT+TGG + chr8_3:49223655-49223674 Msa1292700:intron 20.0%
!! TATATTTAGTGTTTACTTGT+TGG + chr8_3:49223721-49223740 Msa1292700:intron 20.0%
!! AGTATTAATTAGGTGTATTA+TGG + chr8_3:49223760-49223779 Msa1292700:intron 20.0%
!!! TAATCAAGTTGAAAATTTGA+AGG + chr8_3:49223795-49223814 Msa1292700:intron 20.0%
!!! AATCAAGTTGAAAATTTGAA+GGG + chr8_3:49223796-49223815 Msa1292700:intron 20.0%
!! TTAGAACATAAGTTTATAAG+TGG - chr8_3:49224231-49224250 None:intergenic 20.0%
!!! TTAAAATGATACTGTTGTTT+TGG - chr8_3:49224540-49224559 None:intergenic 20.0%
!!! TATTTTTGGTCAAGAAAATA+AGG + chr8_3:49224779-49224798 Msa1292700:intron 20.0%
!! TTAATGCAACATTTATTTCA+TGG + chr8_3:49225088-49225107 Msa1292700:intron 20.0%
!! TACAATTGGAAAGAAAATAA+CGG + chr8_3:49225973-49225992 Msa1292700:CDS 20.0%
!!! TTTTCAAGATATAATAGAAC+AGG + chr8_3:49226269-49226288 Msa1292700:three_prime_UTR 20.0%
!! TGAAATAATTTAGCAATCTT+TGG + chr8_3:49226481-49226500 Msa1292700:three_prime_UTR 20.0%
!! TGAAAATTCAGAGAAAATAT+TGG + chr8_3:49226515-49226534 Msa1292700:three_prime_UTR 20.0%
! GAAGAATATCATACAAATTC+TGG + chr8_3:49219180-49219199 Msa1292700:CDS 25.0%
! TAGTTTCAGTGTAAATTTCA+AGG + chr8_3:49219209-49219228 Msa1292700:CDS 25.0%
! ACCACATTTAAAAAATTCGA+CGG - chr8_3:49219319-49219338 None:intergenic 25.0%
!!! AGCTTAAAGTTTTTAAGACT+TGG + chr8_3:49219745-49219764 Msa1292700:CDS 25.0%
!!! GCTTAAAGTTTTTAAGACTT+GGG + chr8_3:49219746-49219765 Msa1292700:CDS 25.0%
!! CTTAAGCATACATTCTTTTA+AGG - chr8_3:49219904-49219923 None:intergenic 25.0%
! TTAAACAACGAGAAGTTAAT+TGG + chr8_3:49220174-49220193 Msa1292700:intron 25.0%
!! TTTTAACAGTAGGAGTTAAT+TGG + chr8_3:49220202-49220221 Msa1292700:intron 25.0%
! CAATAACAATCTACTTTACA+TGG + chr8_3:49220338-49220357 Msa1292700:intron 25.0%
! TGTAGACAATCATCATTAAA+CGG + chr8_3:49220383-49220402 Msa1292700:intron 25.0%
! TTATGTCAAGTTTGAGAAAA+TGG + chr8_3:49220514-49220533 Msa1292700:intron 25.0%
! GAAACATGTATTAATCATGA+CGG + chr8_3:49220585-49220604 Msa1292700:intron 25.0%
! AACATTATATTATGGTGACT+TGG - chr8_3:49220635-49220654 None:intergenic 25.0%
!! TATTTGACACACAATGTTTT+CGG - chr8_3:49220682-49220701 None:intergenic 25.0%
! ACAAAACAAAAAAAGTTTGG+GGG + chr8_3:49220738-49220757 Msa1292700:intron 25.0%
!!! GTATTTTACTTAGCCTTATT+GGG - chr8_3:49220774-49220793 None:intergenic 25.0%
!!! TGTATTTTACTTAGCCTTAT+TGG - chr8_3:49220775-49220794 None:intergenic 25.0%
!!! CATCATGAAAGTTTTATGTT+TGG - chr8_3:49220897-49220916 None:intergenic 25.0%
! CAAACATAAAACTTTCATGA+TGG + chr8_3:49220895-49220914 Msa1292700:intron 25.0%
!!! TTTTGGTGTTTCAAATTGAA+GGG - chr8_3:49220962-49220981 None:intergenic 25.0%
!!! TTTTTGGTGTTTCAAATTGA+AGG - chr8_3:49220963-49220982 None:intergenic 25.0%
!!! TACTTCTAAGTTTTGTGTTT+TGG + chr8_3:49221072-49221091 Msa1292700:intron 25.0%
! GCTGAGTTGTAAAATAAAAA+AGG + chr8_3:49221158-49221177 Msa1292700:intron 25.0%
!!! ATAAAGATGTTTTAGAAAGG+GGG - chr8_3:49221249-49221268 None:intergenic 25.0%
! AAAAATAAAGAATTACAGCG+GGG - chr8_3:49221281-49221300 None:intergenic 25.0%
! ACATAAAGCTTATGTTACAA+AGG - chr8_3:49221430-49221449 None:intergenic 25.0%
!! TTTGTAACATAAGCTTTATG+TGG + chr8_3:49221429-49221448 Msa1292700:intron 25.0%
! GGAAAATTGTCCATAAAATA+GGG - chr8_3:49221788-49221807 None:intergenic 25.0%
! AGGAAAATTGTCCATAAAAT+AGG - chr8_3:49221789-49221808 None:intergenic 25.0%
!!! AATGTTTTTCTTTGAAGACA+AGG - chr8_3:49221809-49221828 None:intergenic 25.0%
! ATATGCTTATCATATTCAAG+AGG - chr8_3:49221939-49221958 None:intergenic 25.0%
! CTACATGTAATTAGTATACT+TGG - chr8_3:49222242-49222261 None:intergenic 25.0%
!!! AACTATTTTTGTTGCTATGA+TGG + chr8_3:49222508-49222527 Msa1292700:intron 25.0%
!! ATGATGGAATATGAAACATA+TGG + chr8_3:49222524-49222543 Msa1292700:intron 25.0%
!! GAATCTTTGTGTTATTCTTT+AGG - chr8_3:49222734-49222753 None:intergenic 25.0%
! GATTCAAATTCATTTCTTGA+TGG - chr8_3:49222808-49222827 None:intergenic 25.0%
! GAAATATATGAGAGTTTCTA+TGG - chr8_3:49222892-49222911 None:intergenic 25.0%
!!! TTCAAACTTTTTGCTATGTT+TGG - chr8_3:49222980-49222999 None:intergenic 25.0%
! AAGACAAAGATGTTATCATA+TGG + chr8_3:49223259-49223278 Msa1292700:CDS 25.0%
!!! ACTTTTGTTTGGATTCTATA+TGG + chr8_3:49223285-49223304 Msa1292700:CDS 25.0%
! TCAACAAGTTCTTATATTCA+GGG - chr8_3:49223603-49223622 None:intergenic 25.0%
!!! AGAACTTGTTGAGTAAATTA+TGG + chr8_3:49223611-49223630 Msa1292700:intron 25.0%
!! AAAGAGGCAAAGTATTAATT+AGG + chr8_3:49223750-49223769 Msa1292700:intron 25.0%
!!! ATCAAGTTGAAAATTTGAAG+GGG + chr8_3:49223797-49223816 Msa1292700:intron 25.0%
!!! TATGCTGAATTTTTCAAATG+AGG + chr8_3:49223859-49223878 Msa1292700:intron 25.0%
! TCAAAACAATGATGATACAA+AGG + chr8_3:49223882-49223901 Msa1292700:intron 25.0%
! CACATTAAAAATTTGCAATC+TGG + chr8_3:49223920-49223939 Msa1292700:intron 25.0%
!!! TAGGAACATAGTTTTAATTG+TGG + chr8_3:49224021-49224040 Msa1292700:intron 25.0%
!!! ACTCAACTGAAATTTTAAGA+TGG - chr8_3:49224165-49224184 None:intergenic 25.0%
! TACAAATGACACATTTCTAA+TGG - chr8_3:49224355-49224374 None:intergenic 25.0%
! AGTCATAAAAGAGATAACTT+TGG - chr8_3:49224609-49224628 None:intergenic 25.0%
! ATGAATCTAACATATCTGTT+TGG - chr8_3:49225398-49225417 None:intergenic 25.0%
! ACTCAACTTGAAATAGTTTA+CGG + chr8_3:49225734-49225753 Msa1292700:CDS 25.0%
! TATAGAGTTATAGCTACAAT+TGG + chr8_3:49225959-49225978 Msa1292700:CDS 25.0%
! AAACAGTTAATCTCAAAAGA+CGG - chr8_3:49226332-49226351 None:intergenic 25.0%
! TGAGATTAACTGTTTATTTG+TGG + chr8_3:49226337-49226356 Msa1292700:three_prime_UTR 25.0%
! TGTTTATTTGTGGTGAAATT+TGG + chr8_3:49226347-49226366 Msa1292700:three_prime_UTR 25.0%
!!! TGAGTTGATATTTTCTCTTG+TGG - chr8_3:49219156-49219175 None:intergenic 30.0%
!!! ACCGTCGAATTTTTTAAATG+TGG + chr8_3:49219315-49219334 Msa1292700:CDS 30.0%
! GAAAAATGCTTGATTTTGCT+GGG + chr8_3:49219652-49219671 Msa1292700:CDS 30.0%
! AAAAATGCTTGATTTTGCTG+GGG + chr8_3:49219653-49219672 Msa1292700:CDS 30.0%
!!! TTTTTAGGGCTTTTTACCAA+GGG - chr8_3:49219790-49219809 None:intergenic 30.0%
!!! TTTTTTAGGGCTTTTTACCA+AGG - chr8_3:49219791-49219810 None:intergenic 30.0%
AAGAATGTATGCTTAAGTGT+CGG + chr8_3:49219907-49219926 Msa1292700:intron 30.0%
ATCTTAGGGTTTATCTATGT+GGG + chr8_3:49219941-49219960 Msa1292700:intron 30.0%
!! TTACAAGTACTGATGAACTA+TGG + chr8_3:49220021-49220040 Msa1292700:intron 30.0%
TTACTAGAACAGGTATTCTT+CGG - chr8_3:49220449-49220468 None:intergenic 30.0%
GCATTATTCATTACTAGAAC+AGG - chr8_3:49220459-49220478 None:intergenic 30.0%
TTGACATAAGACCCATAAAA+TGG - chr8_3:49220503-49220522 None:intergenic 30.0%
! ATTTGACACACAATGTTTTC+GGG - chr8_3:49220681-49220700 None:intergenic 30.0%
! TATGTTTGGGACATCAAATT+TGG - chr8_3:49220883-49220902 None:intergenic 30.0%
! ATTATTCGGAGGATACTTTT+TGG - chr8_3:49220979-49220998 None:intergenic 30.0%
!!! TGTTTTGGCCAATGAAATAT+TGG + chr8_3:49221087-49221106 Msa1292700:intron 30.0%
!! GTTTTGGCCAATGAAATATT+GGG + chr8_3:49221088-49221107 Msa1292700:intron 30.0%
! TTTTGGCCAATGAAATATTG+GGG + chr8_3:49221089-49221108 Msa1292700:intron 30.0%
AAATGAAACTTGATGTTGTC+AGG - chr8_3:49221368-49221387 None:intergenic 30.0%
TTCTCTACATGTTGACATAA+CGG - chr8_3:49221458-49221477 None:intergenic 30.0%
ATAAACATCATACGGAAGTA+AGG + chr8_3:49221548-49221567 Msa1292700:intron 30.0%
TAAACATCATACGGAAGTAA+GGG + chr8_3:49221549-49221568 Msa1292700:intron 30.0%
! AAACTTCCATCCCTATTTTA+TGG + chr8_3:49221775-49221794 Msa1292700:intron 30.0%
AATTGTCCATAAAATAGGGA+TGG - chr8_3:49221784-49221803 None:intergenic 30.0%
GAAGAATATAAGTGAATGAG+TGG - chr8_3:49222596-49222615 None:intergenic 30.0%
ATATGAATGAAGAGAAAGAG+TGG - chr8_3:49222698-49222717 None:intergenic 30.0%
ACTCTTTCTCTTCATTCATA+TGG + chr8_3:49222697-49222716 Msa1292700:intron 30.0%
ATGAATTTGAATCACTCTTG+TGG + chr8_3:49222815-49222834 Msa1292700:intron 30.0%
AGAAACTCTCTTAGAAACAA+AGG - chr8_3:49222932-49222951 None:intergenic 30.0%
AAGATGATAAGCTAGCAAAA+GGG - chr8_3:49223021-49223040 None:intergenic 30.0%
AAAGATGATAAGCTAGCAAA+AGG - chr8_3:49223022-49223041 None:intergenic 30.0%
! TAACGATGAAGTATCAGAAA+TGG + chr8_3:49223123-49223142 Msa1292700:CDS 30.0%
CCTAAAGATGTCATAAACAA+AGG - chr8_3:49223223-49223242 None:intergenic 30.0%
! CCTTTGTTTATGACATCTTT+AGG + chr8_3:49223220-49223239 Msa1292700:CDS 30.0%
!! TTTATGACATCTTTAGGACA+AGG + chr8_3:49223226-49223245 Msa1292700:CDS 30.0%
! TCATATGGAACACTTTTGTT+TGG + chr8_3:49223274-49223293 Msa1292700:CDS 30.0%
TAATGATGTTGCAAATGCAA+TGG + chr8_3:49223324-49223343 Msa1292700:CDS 30.0%
AATGATGTTGCAAATGCAAT+GGG + chr8_3:49223325-49223344 Msa1292700:CDS 30.0%
! TCTTGTTGCTAATGTTTTTC+AGG + chr8_3:49223468-49223487 Msa1292700:CDS 30.0%
! CTTGTTGCTAATGTTTTTCA+GGG + chr8_3:49223469-49223488 Msa1292700:CDS 30.0%
CTCAACAAGTTCTTATATTC+AGG - chr8_3:49223604-49223623 None:intergenic 30.0%
AAGTTTACCATTTATGAGAG+AGG + chr8_3:49223691-49223710 Msa1292700:intron 30.0%
!! TCAAGTTGAAAATTTGAAGG+GGG + chr8_3:49223798-49223817 Msa1292700:intron 30.0%
! TGGTATTGAGAAAACTTTGT+AGG + chr8_3:49223987-49224006 Msa1292700:intron 30.0%
! TTTGTAGGAATCTAGAACTT+AGG + chr8_3:49224002-49224021 Msa1292700:intron 30.0%
GTTATAATCACCTCATAATC+CGG - chr8_3:49224207-49224226 None:intergenic 30.0%
TCTTAACAAAAACCTTGGTT+AGG + chr8_3:49224274-49224293 Msa1292700:intron 30.0%
!! ATGTGTCATTTGTATGACAT+TGG + chr8_3:49224361-49224380 Msa1292700:intron 30.0%
!! TGTGTCATTTGTATGACATT+GGG + chr8_3:49224362-49224381 Msa1292700:intron 30.0%
ATATCTGACACTGTAAACTA+AGG - chr8_3:49224393-49224412 None:intergenic 30.0%
! CTCAGCTTTTTATTGCTATA+AGG + chr8_3:49224503-49224522 Msa1292700:intron 30.0%
TTTATTGCTATAAGGCCAAA+AGG + chr8_3:49224511-49224530 Msa1292700:intron 30.0%
! AGTTATCTCTTTTATGACTG+AGG + chr8_3:49224610-49224629 Msa1292700:intron 30.0%
!! AATAACTGCATGTTGTTTCA+AGG - chr8_3:49224718-49224737 None:intergenic 30.0%
! TTGAGTTTTCTGAGTTATTG+AGG + chr8_3:49224736-49224755 Msa1292700:intron 30.0%
ATGCAGTTTGCATCATATTA+TGG + chr8_3:49224881-49224900 Msa1292700:intron 30.0%
AGTTTGCATCATATTATGGT+TGG + chr8_3:49224885-49224904 Msa1292700:intron 30.0%
ATACAATGTGTAGTAGATAC+CGG - chr8_3:49224911-49224930 None:intergenic 30.0%
ATCTACTACACATTGTATAG+TGG + chr8_3:49224913-49224932 Msa1292700:CDS 30.0%
TCTACTACACATTGTATAGT+GGG + chr8_3:49224914-49224933 Msa1292700:CDS 30.0%
TGATTTCACCACACATTATT+GGG - chr8_3:49225193-49225212 None:intergenic 30.0%
ATGATTTCACCACACATTAT+TGG - chr8_3:49225194-49225213 None:intergenic 30.0%
! AGAGAAGAAGCTTATGTTTT+GGG - chr8_3:49225693-49225712 None:intergenic 30.0%
! GAAATAGTTTACGGAGTTTT+CGG + chr8_3:49225743-49225762 Msa1292700:CDS 30.0%
TAGAACAGGTTATATGTATG+TGG + chr8_3:49226283-49226302 Msa1292700:three_prime_UTR 30.0%
AATTTAACATGGTGAACCTT+TGG + chr8_3:49226672-49226691 Msa1292700:three_prime_UTR 30.0%
! TTTTTATCTGCTGGAGATGT+AGG + chr8_3:49219291-49219310 Msa1292700:CDS 35.0%
ATTGTCATAGAAACTTCCAC+AGG + chr8_3:49219346-49219365 Msa1292700:CDS 35.0%
TACATCTACCTTTGTCTGAA+GGG + chr8_3:49219487-49219506 Msa1292700:CDS 35.0%
! GGAAAAATGCTTGATTTTGC+TGG + chr8_3:49219651-49219670 Msa1292700:CDS 35.0%
! AGGACTTTTGTAAGGAGATT+GGG + chr8_3:49219718-49219737 Msa1292700:CDS 35.0%
CAAAATAACAAGCATACCCT+TGG + chr8_3:49219771-49219790 Msa1292700:CDS 35.0%
GATCTTAGGGTTTATCTATG+TGG + chr8_3:49219940-49219959 Msa1292700:intron 35.0%
GGTTTATCTATGTGGGATAA+AGG + chr8_3:49219948-49219967 Msa1292700:intron 35.0%
TATCTATGTGGGATAAAGGT+TGG + chr8_3:49219952-49219971 Msa1292700:intron 35.0%
ATCTATGTGGGATAAAGGTT+GGG + chr8_3:49219953-49219972 Msa1292700:intron 35.0%
! TGATCAATAATTTCGGTGTG+TGG + chr8_3:49220140-49220159 Msa1292700:intron 35.0%
!! AGTAGGAGTTAATTGGTTTG+CGG + chr8_3:49220209-49220228 Msa1292700:intron 35.0%
! CGTCGTTTCTTCCATTTTAT+GGG + chr8_3:49220489-49220508 Msa1292700:intron 35.0%
!! TTACTTAGCCTTATTGGGAT+TGG - chr8_3:49220769-49220788 None:intergenic 35.0%
TTTGGCCAATGAAATATTGG+GGG + chr8_3:49221090-49221109 Msa1292700:intron 35.0%
AAAGTGAGTATCTAGTACCA+AGG - chr8_3:49221500-49221519 None:intergenic 35.0%
TATGATCAAACAGTAAGCAC+TGG + chr8_3:49221574-49221593 Msa1292700:intron 35.0%
CCTTCAACGTTTGCTTAATT+GGG - chr8_3:49221719-49221738 None:intergenic 35.0%
TCCTTCAACGTTTGCTTAAT+TGG - chr8_3:49221720-49221739 None:intergenic 35.0%
TTCGAATTGGTCATCTATTG+CGG + chr8_3:49222185-49222204 Msa1292700:intron 35.0%
ATATGTGAGTTACACGTGTA+TGG - chr8_3:49222394-49222413 None:intergenic 35.0%
AAGAAAGAGTGGAAAGAATG+TGG - chr8_3:49222657-49222676 None:intergenic 35.0%
!! GTGAAAGAAGTGTGTGTTTT+TGG - chr8_3:49222756-49222775 None:intergenic 35.0%
! TTTGCTATGTTTGGTGAAAG+TGG - chr8_3:49222971-49222990 None:intergenic 35.0%
! AGCTTATCATCTTTTGCAGA+AGG + chr8_3:49223028-49223047 Msa1292700:intron 35.0%
TGTTTGGATTCTATATGGCT+TGG + chr8_3:49223290-49223309 Msa1292700:CDS 35.0%
! TTCTATATGGCTTGGAACAT+TGG + chr8_3:49223298-49223317 Msa1292700:CDS 35.0%
!!! TGCTAATGTTTTTCAGGGAA+AGG + chr8_3:49223474-49223493 Msa1292700:CDS 35.0%
!!! AAGGATACTTTGCTTTTTGC+AGG + chr8_3:49223493-49223512 Msa1292700:CDS 35.0%
!!! AGGATACTTTGCTTTTTGCA+GGG + chr8_3:49223494-49223513 Msa1292700:CDS 35.0%
CAAGTTCTTATATTCAGGGA+CGG - chr8_3:49223599-49223618 None:intergenic 35.0%
TTACCATTTATGAGAGAGGA+TGG + chr8_3:49223695-49223714 Msa1292700:intron 35.0%
AATCCATCCTCTCTCATAAA+TGG - chr8_3:49223701-49223720 None:intergenic 35.0%
! TACTTGTTGGTTGCAAAAAG+AGG + chr8_3:49223734-49223753 Msa1292700:intron 35.0%
! CAAGTTGAAAATTTGAAGGG+GGG + chr8_3:49223799-49223818 Msa1292700:intron 35.0%
ATTGAGCATGTTGAGATAAC+TGG + chr8_3:49223967-49223986 Msa1292700:intron 35.0%
TGACCTGATACGATATTAGA+TGG + chr8_3:49224111-49224130 Msa1292700:intron 35.0%
CTAACTCAACCATACAAAAC+CGG + chr8_3:49224185-49224204 Msa1292700:intron 35.0%
!! GTGTCATTTGTATGACATTG+GGG + chr8_3:49224363-49224382 Msa1292700:intron 35.0%
GTGTCAGATATTAGTGTATG+CGG + chr8_3:49224402-49224421 Msa1292700:intron 35.0%
!!! CTGTTGTTTTGGAAACCTTT+TGG - chr8_3:49224529-49224548 None:intergenic 35.0%
TTGTGTACAAATGCATTCGA+AGG + chr8_3:49225056-49225075 Msa1292700:CDS 35.0%
TGTGTACAAATGCATTCGAA+GGG + chr8_3:49225057-49225076 Msa1292700:CDS 35.0%
GTCAAATTCGTCAAATGAAG+TGG + chr8_3:49225234-49225253 Msa1292700:intron 35.0%
AAACTATTATGAGCTGACAG+TGG + chr8_3:49225282-49225301 Msa1292700:intron 35.0%
ATTGGAAAACTCTTGCTAAG+CGG - chr8_3:49225551-49225570 None:intergenic 35.0%
AGAACTATCCGTAAACAACT+CGG + chr8_3:49225623-49225642 Msa1292700:CDS 35.0%
CAAGTCAAATACTCCACATT+TGG + chr8_3:49225658-49225677 Msa1292700:CDS 35.0%
!! AGAAGAAGCTTATGTTTTGG+GGG - chr8_3:49225691-49225710 None:intergenic 35.0%
! GAGAAGAAGCTTATGTTTTG+GGG - chr8_3:49225692-49225711 None:intergenic 35.0%
! CAGAGAAGAAGCTTATGTTT+TGG - chr8_3:49225694-49225713 None:intergenic 35.0%
AGCTTCTTCTCTGATATTAC+AGG + chr8_3:49225701-49225720 Msa1292700:CDS 35.0%
TCTGATATTACAGGTCCAAA+GGG + chr8_3:49225710-49225729 Msa1292700:CDS 35.0%
!! ATTTCAAGTTGAGTACCCTT+TGG - chr8_3:49225728-49225747 None:intergenic 35.0%
! TGTTTCATGTCATTTGCTCA+CGG + chr8_3:49225788-49225807 Msa1292700:CDS 35.0%
TTCTGTTTGCTTCAAAGCTA+GGG + chr8_3:49226047-49226066 Msa1292700:CDS 35.0%
TGTTAGATCAGAAACAGTGA+AGG + chr8_3:49226141-49226160 Msa1292700:CDS 35.0%
TGAAATTTGGAGAAGAGGAT+CGG + chr8_3:49226360-49226379 Msa1292700:three_prime_UTR 35.0%
!!! GGGATGAAATTTTTGGTGTT+TGG + chr8_3:49226386-49226405 Msa1292700:three_prime_UTR 35.0%
TAGCAATCTTTGGACTTTGA+AGG + chr8_3:49226491-49226510 Msa1292700:three_prime_UTR 35.0%
CTGAAGAATCTTTCAACAGA+TGG - chr8_3:49226614-49226633 None:intergenic 35.0%
TAATGACAGCGAAGAAGAGA+TGG + chr8_3:49219092-49219111 Msa1292700:CDS 40.0%
AAGAACCATGCTTCTAGCAT+TGG + chr8_3:49219240-49219259 Msa1292700:CDS 40.0%
AAACTCGCAACAACCATCTA+GGG - chr8_3:49219274-49219293 None:intergenic 40.0%
AAAACTCGCAACAACCATCT+AGG - chr8_3:49219275-49219294 None:intergenic 40.0%
! TGTTGCGAGTTTTTATCTGC+TGG + chr8_3:49219282-49219301 Msa1292700:CDS 40.0%
TCATAGAAACTTCCACAGGA+AGG + chr8_3:49219350-49219369 Msa1292700:CDS 40.0%
CGAGATAGGTGTTAGATCTT+TGG - chr8_3:49219391-49219410 None:intergenic 40.0%
CAAAGGTAGATGTAGAGAAC+TGG - chr8_3:49219481-49219500 None:intergenic 40.0%
CTACATCTACCTTTGTCTGA+AGG + chr8_3:49219486-49219505 Msa1292700:CDS 40.0%
ACATCTACCTTTGTCTGAAG+GGG + chr8_3:49219488-49219507 Msa1292700:CDS 40.0%
!! TGAAGGGGGCTATATTTTGA+GGG + chr8_3:49219503-49219522 Msa1292700:CDS 40.0%
GGTCTTCACAATCTAAGAAG+AGG + chr8_3:49219598-49219617 Msa1292700:CDS 40.0%
CACAATCTAAGAAGAGGTTC+AGG + chr8_3:49219604-49219623 Msa1292700:CDS 40.0%
AGGTTCACATATGAACAACG+TGG + chr8_3:49219630-49219649 Msa1292700:CDS 40.0%
AGGTTGGAAGATTCAGAAGA+AGG + chr8_3:49219680-49219699 Msa1292700:CDS 40.0%
! TGTTGTCGAGGACTTTTGTA+AGG + chr8_3:49219710-49219729 Msa1292700:CDS 40.0%
! GAGGACTTTTGTAAGGAGAT+TGG + chr8_3:49219717-49219736 Msa1292700:CDS 40.0%
! GGACTTTTGTAAGGAGATTG+GGG + chr8_3:49219719-49219738 Msa1292700:CDS 40.0%
!! CTTAAGTGTCGGTTGATCTT+TGG + chr8_3:49219918-49219937 Msa1292700:intron 40.0%
TCGGTTGATCTTTGGATCTT+AGG + chr8_3:49219926-49219945 Msa1292700:intron 40.0%
CGGTTGATCTTTGGATCTTA+GGG + chr8_3:49219927-49219946 Msa1292700:intron 40.0%
TCTATGTGGGATAAAGGTTG+GGG + chr8_3:49219954-49219973 Msa1292700:intron 40.0%
! CAATAATTTCGGTGTGTGGA+AGG + chr8_3:49220144-49220163 Msa1292700:intron 40.0%
! TTCTTCGGAAGCACATTGAA+GGG - chr8_3:49220434-49220453 None:intergenic 40.0%
! ATTCTTCGGAAGCACATTGA+AGG - chr8_3:49220435-49220454 None:intergenic 40.0%
TAAAATGGAAGAAACGACGC+TGG - chr8_3:49220488-49220507 None:intergenic 40.0%
! GCGTCGTTTCTTCCATTTTA+TGG + chr8_3:49220488-49220507 Msa1292700:intron 40.0%
! TTTCGGGTGTTAACATAGCT+GGG - chr8_3:49220665-49220684 None:intergenic 40.0%
!!! TTTTCGGGTGTTAACATAGC+TGG - chr8_3:49220666-49220685 None:intergenic 40.0%
!! TAGCCTTATTGGGATTGGTT+CGG - chr8_3:49220764-49220783 None:intergenic 40.0%
TCACACCCCCAATATTTCAT+TGG - chr8_3:49221098-49221117 None:intergenic 40.0%
!! AAAATGAAAGCGCTGGACTT+GGG + chr8_3:49221117-49221136 Msa1292700:intron 40.0%
! TAAAAAAGGTGTAGGGCTAC+TGG + chr8_3:49221172-49221191 Msa1292700:intron 40.0%
! AAAAAAGGTGTAGGGCTACT+GGG + chr8_3:49221173-49221192 Msa1292700:intron 40.0%
AAACTTGATGTTGTCAGGAC+CGG - chr8_3:49221363-49221382 None:intergenic 40.0%
CCCAATTAAGCAAACGTTGA+AGG + chr8_3:49221716-49221735 Msa1292700:intron 40.0%
TCGAATTGGTCATCTATTGC+GGG + chr8_3:49222186-49222205 Msa1292700:intron 40.0%
TGAGTTACACGTGTATGGAT+TGG - chr8_3:49222389-49222408 None:intergenic 40.0%
!! TGATGATGGTGAAGAAAGAG+TGG - chr8_3:49222668-49222687 None:intergenic 40.0%
TGAAGAGAAAGAGTGGAAGT+AGG - chr8_3:49222691-49222710 None:intergenic 40.0%
! ATGTTTGGTGAAAGTGGAAG+TGG - chr8_3:49222965-49222984 None:intergenic 40.0%
! ATCTTTTGCAGAAGGAGAAG+AGG + chr8_3:49223036-49223055 Msa1292700:intron 40.0%
! TCTTTTGCAGAAGGAGAAGA+GGG + chr8_3:49223037-49223056 Msa1292700:intron 40.0%
CAACATGCTGCAACAGAAAA+CGG + chr8_3:49223094-49223113 Msa1292700:CDS 40.0%
!! GACATCTTTAGGACAAGGTT+TGG + chr8_3:49223231-49223250 Msa1292700:CDS 40.0%
AATGCAATGGGAACTTCAGT+TGG + chr8_3:49223337-49223356 Msa1292700:CDS 40.0%
!!! TTTTCAGGGGCATTGTTGAT+GGG + chr8_3:49223412-49223431 Msa1292700:CDS 40.0%
TGTGACTAGTACAATGCAGA+AGG + chr8_3:49223441-49223460 Msa1292700:CDS 40.0%
GTGACTAGTACAATGCAGAA+GGG + chr8_3:49223442-49223461 Msa1292700:CDS 40.0%
TTGAAGGGGGGCTTATAAAA+AGG + chr8_3:49223811-49223830 Msa1292700:intron 40.0%
TGAAGGGGGGCTTATAAAAA+GGG + chr8_3:49223812-49223831 Msa1292700:intron 40.0%
!!! GCAATCTGGTTTTGTGATGT+TGG + chr8_3:49223934-49223953 Msa1292700:intron 40.0%
TCAGAACTGATAGGCAATAG+CGG + chr8_3:49224088-49224107 Msa1292700:intron 40.0%
GGACCATCTAATATCGTATC+AGG - chr8_3:49224117-49224136 None:intergenic 40.0%
TACGATATTAGATGGTCCGA+CGG + chr8_3:49224119-49224138 Msa1292700:intron 40.0%
AGAGCTTATCTATGATCCGT+CGG - chr8_3:49224138-49224157 None:intergenic 40.0%
!! CCTCATAATCCGGTTTTGTA+TGG - chr8_3:49224197-49224216 None:intergenic 40.0%
CCATACAAAACCGGATTATG+AGG + chr8_3:49224194-49224213 Msa1292700:intron 40.0%
AAACATAGCTCTTCGAACGT+CGG + chr8_3:49224249-49224268 Msa1292700:intron 40.0%
CGGACTCTTAACAAAAACCT+TGG + chr8_3:49224269-49224288 Msa1292700:intron 40.0%
GAATCGTATGTTCCTAACCA+AGG - chr8_3:49224289-49224308 None:intergenic 40.0%
!!! TTCCTTGTTTTCTTCAGCCA+GGG - chr8_3:49224311-49224330 None:intergenic 40.0%
!!! TTTCCTTGTTTTCTTCAGCC+AGG - chr8_3:49224312-49224331 None:intergenic 40.0%
TATTAGTGTATGCGGCTACA+TGG + chr8_3:49224410-49224429 Msa1292700:intron 40.0%
ATTAGTGTATGCGGCTACAT+GGG + chr8_3:49224411-49224430 Msa1292700:intron 40.0%
AGCAAAGACAAGACTTGTCT+TGG + chr8_3:49224668-49224687 Msa1292700:intron 40.0%
TGCATCATATTATGGTTGGC+CGG + chr8_3:49224889-49224908 Msa1292700:CDS 40.0%
! ACATTGTATAGTGGGAGCAA+TGG + chr8_3:49224922-49224941 Msa1292700:CDS 40.0%
! ATGGATTTTCTCGCCACTAT+TGG + chr8_3:49225015-49225034 Msa1292700:CDS 40.0%
! TGGATTTTCTCGCCACTATT+GGG + chr8_3:49225016-49225035 Msa1292700:CDS 40.0%
TCAGATCACCCAATAATGTG+TGG + chr8_3:49225182-49225201 Msa1292700:intron 40.0%
ATGAAGTGGCAATAGATCGT+TGG + chr8_3:49225248-49225267 Msa1292700:intron 40.0%
TGCATGGGGGAAAATATTAG+TGG - chr8_3:49225431-49225450 None:intergenic 40.0%
ACTGTATACAAACTGCATGG+GGG - chr8_3:49225444-49225463 None:intergenic 40.0%
CACTGTATACAAACTGCATG+GGG - chr8_3:49225445-49225464 None:intergenic 40.0%
GCACTGTATACAAACTGCAT+GGG - chr8_3:49225446-49225465 None:intergenic 40.0%
TGCACTGTATACAAACTGCA+TGG - chr8_3:49225447-49225466 None:intergenic 40.0%
GCACCAATTGCTGTATTTCT+TGG + chr8_3:49225497-49225516 Msa1292700:CDS 40.0%
ACGCCAAGAAATACAGCAAT+TGG - chr8_3:49225503-49225522 None:intergenic 40.0%
TTGGAAAACTCTTGCTAAGC+GGG - chr8_3:49225550-49225569 None:intergenic 40.0%
!!! TTTTCCAATAGCTCTAAGCC+AGG + chr8_3:49225562-49225581 Msa1292700:CDS 40.0%
GAAGATGTCCGAGTTGTTTA+CGG - chr8_3:49225634-49225653 None:intergenic 40.0%
CTCTGATATTACAGGTCCAA+AGG + chr8_3:49225709-49225728 Msa1292700:CDS 40.0%
TTGTAGAATAGCTAACGCAC+CGG - chr8_3:49225849-49225868 None:intergenic 40.0%
TTCCGATTGATGTTCTTGCT+TGG + chr8_3:49225897-49225916 Msa1292700:CDS 40.0%
TCCGATTGATGTTCTTGCTT+GGG + chr8_3:49225898-49225917 Msa1292700:CDS 40.0%
TTGTTGCAGGACTAATGATG+TGG + chr8_3:49225933-49225952 Msa1292700:CDS 40.0%
TGTTGCAGGACTAATGATGT+GGG + chr8_3:49225934-49225953 Msa1292700:CDS 40.0%
GTTCTGTTTGCTTCAAAGCT+AGG + chr8_3:49226046-49226065 Msa1292700:CDS 40.0%
TGAAGGAGATTTGTGCTTCA+TGG + chr8_3:49226158-49226177 Msa1292700:CDS 40.0%
GAAGGAGATTTGTGCTTCAT+GGG + chr8_3:49226159-49226178 Msa1292700:CDS 40.0%
! TTCATGGGCTGTTACTATTC+CGG + chr8_3:49226174-49226193 Msa1292700:CDS 40.0%
TGTGGTGAAATTTGGAGAAG+AGG + chr8_3:49226355-49226374 Msa1292700:three_prime_UTR 40.0%
! TCGGCAAGGGATGAAATTTT+TGG + chr8_3:49226379-49226398 Msa1292700:three_prime_UTR 40.0%
TGGTTTCTATGTGAAGACTG+TGG + chr8_3:49226406-49226425 Msa1292700:three_prime_UTR 40.0%
! AACCATGCTTCTAGCATTGG+AGG + chr8_3:49219243-49219262 Msa1292700:CDS 45.0%
AACCTCCAATGCTAGAAGCA+TGG - chr8_3:49219248-49219267 None:intergenic 45.0%
ATTGGAGGTTATGCCCTAGA+TGG + chr8_3:49219258-49219277 Msa1292700:CDS 45.0%
CAGCAATTGTTTCCTTCCTG+TGG - chr8_3:49219365-49219384 None:intergenic 45.0%
! CATGGAGCACTAAACGAGAT+AGG - chr8_3:49219405-49219424 None:intergenic 45.0%
!! TAGAAGGAGTTGGTGCTTGA+GGG - chr8_3:49219431-49219450 None:intergenic 45.0%
! TTCTACAACCAGAGCACCAA+GGG + chr8_3:49219446-49219465 Msa1292700:CDS 45.0%
CATCTACCTTTGTCTGAAGG+GGG + chr8_3:49219489-49219508 Msa1292700:CDS 45.0%
ATATAGCCCCCTTCAGACAA+AGG - chr8_3:49219498-49219517 None:intergenic 45.0%
! CTGAAGGGGGCTATATTTTG+AGG + chr8_3:49219502-49219521 Msa1292700:CDS 45.0%
CATGTTGTCGAGCCTATCAA+CGG + chr8_3:49219549-49219568 Msa1292700:CDS 45.0%
CTAAGAAGAGGTTCAGGTCT+AGG + chr8_3:49219610-49219629 Msa1292700:CDS 45.0%
GAAGGATGAGAATGTTGTCG+AGG + chr8_3:49219698-49219717 Msa1292700:CDS 45.0%
!! GAAAATGAAAGCGCTGGACT+TGG + chr8_3:49221116-49221135 Msa1292700:intron 45.0%
!! AAATGAAAGCGCTGGACTTG+GGG + chr8_3:49221118-49221137 Msa1292700:intron 45.0%
ACTGGGCTGAAGTCTGATAA+AGG + chr8_3:49221190-49221209 Msa1292700:intron 45.0%
AAGGAAGCGACATCGTTTGA+TGG - chr8_3:49221481-49221500 None:intergenic 45.0%
! ATCAAACGATGTCGCTTCCT+TGG + chr8_3:49221480-49221499 Msa1292700:intron 45.0%
GTCTCTCTGGTGCTTACTAT+TGG - chr8_3:49221649-49221668 None:intergenic 45.0%
AAGGAAGAGCTAAGTCTCTC+TGG - chr8_3:49221662-49221681 None:intergenic 45.0%
CTATTGCGGGAGATCTATTG+CGG + chr8_3:49222199-49222218 Msa1292700:intron 45.0%
TATTGCGGGAGATCTATTGC+GGG + chr8_3:49222200-49222219 Msa1292700:intron 45.0%
AGAGTGGAAGTAGGTGATGA+TGG - chr8_3:49222682-49222701 None:intergenic 45.0%
AAAGTGGAAGTGGCTTCACA+TGG - chr8_3:49222955-49222974 None:intergenic 45.0%
! CGTTTTCTGTTGCAGCATGT+TGG - chr8_3:49223096-49223115 None:intergenic 45.0%
ATGGGAACTTCAGTTGGATC+TGG + chr8_3:49223343-49223362 Msa1292700:CDS 45.0%
! GATCTGGTGCATTGTCACTT+AGG + chr8_3:49223359-49223378 Msa1292700:CDS 45.0%
!! CTGCAGTGTTGGAGTTTTCA+GGG + chr8_3:49223398-49223417 Msa1292700:CDS 45.0%
!! TGCAGTGTTGGAGTTTTCAG+GGG + chr8_3:49223399-49223418 Msa1292700:CDS 45.0%
!!! GTTTTCAGGGGCATTGTTGA+TGG + chr8_3:49223411-49223430 Msa1292700:CDS 45.0%
GTTAGGAACATACGATTCCC+TGG + chr8_3:49224291-49224310 Msa1292700:intron 45.0%
TTCCCTGGCTGAAGAAAACA+AGG + chr8_3:49224306-49224325 Msa1292700:intron 45.0%
! TGTATAGTGGGAGCAATGGT+AGG + chr8_3:49224926-49224945 Msa1292700:CDS 45.0%
! GTATAGTGGGAGCAATGGTA+GGG + chr8_3:49224927-49224946 Msa1292700:CDS 45.0%
GTAGGGTTTGGCCTAGTTTA+TGG + chr8_3:49224944-49224963 Msa1292700:CDS 45.0%
!!! AGGTGCTGGAGCTGTATTTT+GGG + chr8_3:49224967-49224986 Msa1292700:CDS 45.0%
!!! AGCTGTATTTTGGGGTTCAC+TGG + chr8_3:49224976-49224995 Msa1292700:CDS 45.0%
TGGCAAGAGTGATTTCGTCA+TGG + chr8_3:49224996-49225015 Msa1292700:CDS 45.0%
GTATACAGTGCAAGTAACCC+AGG + chr8_3:49225455-49225474 Msa1292700:CDS 45.0%
GCTGTATTTCTTGGCGTAAC+TGG + chr8_3:49225506-49225525 Msa1292700:CDS 45.0%
AATGCCTGGCTTAGAGCTAT+TGG - chr8_3:49225569-49225588 None:intergenic 45.0%
! TACGGATAGTTCTGTTGACC+AGG - chr8_3:49225616-49225635 None:intergenic 45.0%
!!! AAGCTTATGTTTTGGGGGAC+GGG - chr8_3:49225686-49225705 None:intergenic 45.0%
!!! GAAGCTTATGTTTTGGGGGA+CGG - chr8_3:49225687-49225706 None:intergenic 45.0%
! TTCATGTCATTTGCTCACGG+TGG + chr8_3:49225791-49225810 Msa1292700:CDS 45.0%
AACGATGTCTCCAACGCAAT+AGG + chr8_3:49225815-49225834 Msa1292700:CDS 45.0%
GGTGCGTTAGCTATTCTACA+AGG + chr8_3:49225848-49225867 Msa1292700:CDS 45.0%
ATTCTACAAGGCGCAGCAAA+AGG + chr8_3:49225860-49225879 Msa1292700:CDS 45.0%
CCCCAAGCAAGAACATCAAT+CGG - chr8_3:49225902-49225921 None:intergenic 45.0%
CCGATTGATGTTCTTGCTTG+GGG + chr8_3:49225899-49225918 Msa1292700:CDS 45.0%
ATTGATGTTCTTGCTTGGGG+TGG + chr8_3:49225902-49225921 Msa1292700:CDS 45.0%
! GGTGGATTTGGAATTGTTGC+AGG + chr8_3:49225920-49225939 Msa1292700:CDS 45.0%
GTTGCAGGACTAATGATGTG+GGG + chr8_3:49225935-49225954 Msa1292700:CDS 45.0%
AAAGCTAGGGCTACCGATAT+CGG + chr8_3:49226060-49226079 Msa1292700:CDS 45.0%
! TACGCTAGTTGGTGCAGTAA+TGG + chr8_3:49226090-49226109 Msa1292700:CDS 45.0%
! ACGCTAGTTGGTGCAGTAAT+GGG + chr8_3:49226091-49226110 Msa1292700:CDS 45.0%
CCACGTGTAAATCACCGATA+AGG - chr8_3:49226209-49226228 None:intergenic 45.0%
CCTTATCGGTGATTTACACG+TGG + chr8_3:49226206-49226225 Msa1292700:CDS 45.0%
!! AATAATAATAATAATAAGTA+TGG + chr8_3:49219868-49219887 Msa1292700:intron 5.0%
!!! CTTTTTAATTAATAATATAT+AGG - chr8_3:49220714-49220733 None:intergenic 5.0%
!! GATTTAATAATATAATAATA+TGG - chr8_3:49220921-49220940 None:intergenic 5.0%
!!! AAATTTGTTTTTTTATTATT+CGG - chr8_3:49220993-49221012 None:intergenic 5.0%
CAGCGAAGAAGAGATGGTGA+TGG + chr8_3:49219098-49219117 Msa1292700:CDS 50.0%
!! GTAGAAGGAGTTGGTGCTTG+AGG - chr8_3:49219432-49219451 None:intergenic 50.0%
GCTCTGGTTGTAGAAGGAGT+TGG - chr8_3:49219441-49219460 None:intergenic 50.0%
!! CTTGGTGCTCTGGTTGTAGA+AGG - chr8_3:49219447-49219466 None:intergenic 50.0%
! CTTCTACAACCAGAGCACCA+AGG + chr8_3:49219445-49219464 Msa1292700:CDS 50.0%
! TCTACAACCAGAGCACCAAG+GGG + chr8_3:49219447-49219466 Msa1292700:CDS 50.0%
!! AGGGGGCTATATTTTGAGGG+AGG + chr8_3:49219506-49219525 Msa1292700:CDS 50.0%
TCAGTACCACCACCGTTGAT+AGG - chr8_3:49219564-49219583 None:intergenic 50.0%
! ATCAACGGTGGTGGTACTGA+TGG + chr8_3:49219564-49219583 Msa1292700:CDS 50.0%
!! GTACTGATGGTGGTGGAGAA+GGG + chr8_3:49219577-49219596 Msa1292700:CDS 50.0%
! GGGTGTGAAAATGAAAGCGC+TGG + chr8_3:49221110-49221129 Msa1292700:intron 50.0%
GTGGTGCTTGAAGCTTCTTG+AGG - chr8_3:49222577-49222596 None:intergenic 50.0%
! TGTGTTGACAGCTGCAGTGT+TGG + chr8_3:49223387-49223406 Msa1292700:CDS 50.0%
!! GCTGCAGTGTTGGAGTTTTC+AGG + chr8_3:49223397-49223416 Msa1292700:CDS 50.0%
! CTTTCTTCACTTGCTGCTGC+TGG + chr8_3:49223520-49223539 Msa1292700:CDS 50.0%
TGCTGCTGGTACTTGGTTAC+AGG + chr8_3:49223534-49223553 Msa1292700:CDS 50.0%
!! ATCAGTTCTGAGCGTGAGGA+GGG - chr8_3:49224079-49224098 None:intergenic 50.0%
!! TATCAGTTCTGAGCGTGAGG+AGG - chr8_3:49224080-49224099 None:intergenic 50.0%
TCCTCACGCTCAGAACTGAT+AGG + chr8_3:49224079-49224098 Msa1292700:intron 50.0%
CGGCTACATGGGAATTTGTC+TGG + chr8_3:49224422-49224441 Msa1292700:intron 50.0%
GGGTTTGGCCTAGTTTATGG+AGG + chr8_3:49224947-49224966 Msa1292700:CDS 50.0%
CTCCAGCACCTCCATAAACT+AGG - chr8_3:49224958-49224977 None:intergenic 50.0%
!!! GAGGTGCTGGAGCTGTATTT+TGG + chr8_3:49224966-49224985 Msa1292700:CDS 50.0%
!! GGTGCTGGAGCTGTATTTTG+GGG + chr8_3:49224968-49224987 Msa1292700:CDS 50.0%
GATACTGCTGCTCCCAATAG+TGG - chr8_3:49225031-49225050 None:intergenic 50.0%
! CTAAGCCAGGCATTAGCTTG+TGG + chr8_3:49225575-49225594 Msa1292700:CDS 50.0%
!! GCATTAGCTTGTGGAACCGT+CGG + chr8_3:49225584-49225603 Msa1292700:CDS 50.0%
!! CATTAGCTTGTGGAACCGTC+GGG + chr8_3:49225585-49225604 Msa1292700:CDS 50.0%
!! ATTAGCTTGTGGAACCGTCG+GGG + chr8_3:49225586-49225605 Msa1292700:CDS 50.0%
! CGGAGTTTTCGGTTACATGC+AGG + chr8_3:49225754-49225773 Msa1292700:CDS 50.0%
CTCCAACGCAATAGGTCCAT+TGG + chr8_3:49225823-49225842 Msa1292700:CDS 50.0%
AACGCAATAGGTCCATTGGC+CGG + chr8_3:49225827-49225846 Msa1292700:CDS 50.0%
! GTTCTTGCTTGGGGTGGATT+TGG + chr8_3:49225908-49225927 Msa1292700:CDS 50.0%
ACGGAACTTACACCGACAAG+AGG + chr8_3:49225992-49226011 Msa1292700:CDS 50.0%
TCGGCTGCAAATCCTCTTGT+CGG - chr8_3:49226007-49226026 None:intergenic 50.0%
AACCGAAGCAGCTGCAAACT+CGG - chr8_3:49226026-49226045 None:intergenic 50.0%
AAGCTAGGGCTACCGATATC+GGG + chr8_3:49226061-49226080 Msa1292700:CDS 50.0%
AGCGTATGTGTCCCCGATAT+CGG - chr8_3:49226076-49226095 None:intergenic 50.0%
! GTTGGTGCAGTAATGGGAGT+TGG + chr8_3:49226097-49226116 Msa1292700:CDS 50.0%
ATGGGAGTTGGATTCGCAAG+AGG + chr8_3:49226109-49226128 Msa1292700:CDS 50.0%
TGGGCTGTTACTATTCCGGT+TGG + chr8_3:49226178-49226197 Msa1292700:CDS 50.0%
TTTGGAGAAGAGGATCGGCA+AGG + chr8_3:49226365-49226384 Msa1292700:three_prime_UTR 50.0%
TTGGAGAAGAGGATCGGCAA+GGG + chr8_3:49226366-49226385 Msa1292700:three_prime_UTR 50.0%
!! AAGGAGTTGGTGCTTGAGGG+AGG - chr8_3:49219428-49219447 None:intergenic 55.0%
GTTGTCGAGCCTATCAACGG+TGG + chr8_3:49219552-49219571 Msa1292700:CDS 55.0%
!! AACGGTGGTGGTACTGATGG+TGG + chr8_3:49219567-49219586 Msa1292700:CDS 55.0%
!! GGTACTGATGGTGGTGGAGA+AGG + chr8_3:49219576-49219595 Msa1292700:CDS 55.0%
! CTTGATTTTGCTGGGGCACG+AGG + chr8_3:49219660-49219679 Msa1292700:CDS 55.0%
! ATTTTGCTGGGGCACGAGGT+TGG + chr8_3:49219664-49219683 Msa1292700:CDS 55.0%
GAAGAAACGACGCTGGACGT+TGG - chr8_3:49220481-49220500 None:intergenic 55.0%
GGGCCGAACCAATCCCAATA+AGG + chr8_3:49220758-49220777 Msa1292700:intron 55.0%
! TTTTCCGCCCTCTACGAGCA+TGG + chr8_3:49221300-49221319 Msa1292700:intron 55.0%
CTAGGGTCCATGCTCGTAGA+GGG - chr8_3:49221310-49221329 None:intergenic 55.0%
GAGATCTATTGCGGGAGGGA+GGG + chr8_3:49222208-49222227 Msa1292700:intron 55.0%
! CACTTGCTGCTGCTGGTACT+TGG + chr8_3:49223527-49223546 Msa1292700:CDS 55.0%
!! GCCTATCAGTTCTGAGCGTG+AGG - chr8_3:49224083-49224102 None:intergenic 55.0%
GTGGGAGCAATGGTAGGGTT+TGG + chr8_3:49224932-49224951 Msa1292700:CDS 55.0%
! GGCCTAGTTTATGGAGGTGC+TGG + chr8_3:49224953-49224972 Msa1292700:CDS 55.0%
GCTAAGCGGGAAAGCAGCAA+AGG - chr8_3:49225537-49225556 None:intergenic 55.0%
CGGTTCCACAAGCTAATGCC+TGG - chr8_3:49225583-49225602 None:intergenic 55.0%
GGCCAATGGACCTATTGCGT+TGG - chr8_3:49225828-49225847 None:intergenic 55.0%
! ATAGCTAACGCACCGGCCAA+TGG - chr8_3:49225842-49225861 None:intergenic 55.0%
AGCCGAGTTTGCAGCTGCTT+CGG + chr8_3:49226021-49226040 Msa1292700:CDS 55.0%
AGCTAGGGCTACCGATATCG+GGG + chr8_3:49226062-49226081 Msa1292700:CDS 55.0%
TCGGGGACACATACGCTAGT+TGG + chr8_3:49226079-49226098 Msa1292700:CDS 55.0%
TCCGGTTGGCGCTACCTTAT+CGG + chr8_3:49226192-49226211 Msa1292700:CDS 55.0%
ACCGATAAGGTAGCGCCAAC+CGG - chr8_3:49226196-49226215 None:intergenic 55.0%
! GTTGGTGCTTGAGGGAGGCA+TGG - chr8_3:49219423-49219442 None:intergenic 60.0%
GTCGAGCCTATCAACGGTGG+TGG + chr8_3:49219555-49219574 Msa1292700:CDS 60.0%
!! GGTGGTGGTACTGATGGTGG+TGG + chr8_3:49219570-49219589 Msa1292700:CDS 60.0%
CCTAGGGTCCATGCTCGTAG+AGG - chr8_3:49221311-49221330 None:intergenic 60.0%
CCTCTACGAGCATGGACCCT+AGG + chr8_3:49221308-49221327 Msa1292700:intron 60.0%
ATGTTGTCAGGACCGGCCCT+AGG - chr8_3:49221356-49221375 None:intergenic 60.0%
TGCGGGAGATCTATTGCGGG+AGG + chr8_3:49222203-49222222 Msa1292700:intron 60.0%
GCGGGAGATCTATTGCGGGA+GGG + chr8_3:49222204-49222223 Msa1292700:intron 60.0%
GGAGATCTATTGCGGGAGGG+AGG + chr8_3:49222207-49222226 Msa1292700:intron 60.0%
! CTGCAGCTGCTGCTTGTCCT+GGG - chr8_3:49225475-49225494 None:intergenic 60.0%
GTTGACCAGGAAAGCCCCGA+CGG - chr8_3:49225603-49225622 None:intergenic 60.0%
! TGGGGGACGGGTTCCAAATG+TGG - chr8_3:49225674-49225693 None:intergenic 60.0%
GAACTGGTCGTCGTGCCCCT+TGG - chr8_3:49219465-49219484 None:intergenic 65.0%
GGGTCCATGCTCGTAGAGGG+CGG - chr8_3:49221307-49221326 None:intergenic 65.0%
CTAGGCGTAGACCAGGGGTG+CGG - chr8_3:49221338-49221357 None:intergenic 65.0%
GCACCCCTGGTCTACGCCTA+GGG + chr8_3:49221337-49221356 Msa1292700:intron 65.0%
! GCTGCAGCTGCTGCTTGTCC+TGG - chr8_3:49225476-49225495 None:intergenic 65.0%
TGGAACCGTCGGGGCTTTCC+TGG + chr8_3:49225595-49225614 Msa1292700:CDS 65.0%
!! CGTCGTGCCCCTTGGTGCTC+TGG - chr8_3:49219457-49219476 None:intergenic 70.0%
CGCACCCCTGGTCTACGCCT+AGG + chr8_3:49221336-49221355 Msa1292700:intron 70.0%
CGGCCCTAGGCGTAGACCAG+GGG - chr8_3:49221343-49221362 None:intergenic 70.0%
CCGGCCCTAGGCGTAGACCA+GGG - chr8_3:49221344-49221363 None:intergenic 70.0%
CCCTGGTCTACGCCTAGGGC+CGG + chr8_3:49221341-49221360 Msa1292700:intron 70.0%
ACCGGCCCTAGGCGTAGACC+AGG - chr8_3:49221345-49221364 None:intergenic 70.0%
! CCAGGGGTGCGGCAGGCCTA+GGG - chr8_3:49221327-49221346 None:intergenic 75.0%
! ACCAGGGGTGCGGCAGGCCT+AGG - chr8_3:49221328-49221347 None:intergenic 75.0%
! GCGTAGACCAGGGGTGCGGC+AGG - chr8_3:49221334-49221353 None:intergenic 75.0%
! CCCTAGGCCTGCCGCACCCC+TGG + chr8_3:49221324-49221343 Msa1292700:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 49219069 49226708 49219069 ID=Msa1292700;Name=Msa1292700
chr8_3 mRNA 49219069 49226708 49219069 ID=Msa1292700-mRNA-1;Parent=Msa1292700;Name=Msa1292700-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.66|0.5|1|1|1|4|447|744
chr8_3 exon 49219069 49219792 49219069 ID=Msa1292700-mRNA-1:exon:13664;Parent=Msa1292700-mRNA-1
chr8_3 exon 49223047 49223555 49223047 ID=Msa1292700-mRNA-1:exon:13665;Parent=Msa1292700-mRNA-1
chr8_3 exon 49224887 49225078 49224887 ID=Msa1292700-mRNA-1:exon:13666;Parent=Msa1292700-mRNA-1
chr8_3 exon 49225452 49226708 49225452 ID=Msa1292700-mRNA-1:exon:13667;Parent=Msa1292700-mRNA-1
chr8_3 CDS 49219069 49219792 49219069 ID=Msa1292700-mRNA-1:cds;Parent=Msa1292700-mRNA-1
chr8_3 CDS 49223047 49223555 49223047 ID=Msa1292700-mRNA-1:cds;Parent=Msa1292700-mRNA-1
chr8_3 CDS 49224887 49225078 49224887 ID=Msa1292700-mRNA-1:cds;Parent=Msa1292700-mRNA-1
chr8_3 CDS 49225452 49226261 49225452 ID=Msa1292700-mRNA-1:cds;Parent=Msa1292700-mRNA-1
chr8_3 three_prime_UTR 49226262 49226708 49226262 ID=Msa1292700-mRNA-1:three_prime_utr;Parent=Msa1292700-mRNA-1
Gene Sequence

>Msa1292700

ATGTTAAGTGGGCAAGTGCGAAGTAATGACAGCGAAGAAGAGATGGTGATGGCTAATGAAGTCAACGAAGTGATAATTAACTCACCACAAGAGAAAATATCAACTCAAGTTGAAGAATATCATACAAATTCTGGAAGAAATAGTTTCAGTGTAAATTTCAAGGAATGTTTAAAGAACCATGCTTCTAGCATTGGAGGTTATGCCCTAGATGGTTGTTGCGAGTTTTTATCTGCTGGAGATGTAGGTACCGTCGAATTTTTTAAATGTGGTGCTTGTGATTGTCATAGAAACTTCCACAGGAAGGAAACAATTGCTGTTTCCAAAGATCTAACACCTATCTCGTTTAGTGCTCCATGCCTCCCTCAAGCACCAACTCCTTCTACAACCAGAGCACCAAGGGGCACGACGACCAGTTCTCTACATCTACCTTTGTCTGAAGGGGGCTATATTTTGAGGGAGGATCTTGAACAAAATGTTCATCATGTTGTCGAGCCTATCAACGGTGGTGGTACTGATGGTGGTGGAGAAGGGTCTTCACAATCTAAGAAGAGGTTCAGGTCTAGGTTCACATATGAACAACGTGGAAAAATGCTTGATTTTGCTGGGGCACGAGGTTGGAAGATTCAGAAGAAGGATGAGAATGTTGTCGAGGACTTTTGTAAGGAGATTGGGGTGAAGCTTAAAGTTTTTAAGACTTGGGTTCAAAATAACAAGCATACCCTTGAAGGAGAAGAGGGTTCAAAAGAAGAAATTCAGCACAATGAACATCACCAACATGCTGCAACAGAAAACGGAGAGAATAACGATGAAGTATCAGAAATGGCTAAAGCATTTCACATATCATCAAGAACAGCTTCTGCTATAACAATATGTATAGTAATGGCTGCACTTGTTTTTCCTTTGTTTATGACATCTTTAGGACAAGGTTTGGCATTGAAGACAAAGATGTTATCATATGGAACACTTTTGTTTGGATTCTATATGGCTTGGAACATTGGTGCTAATGATGTTGCAAATGCAATGGGAACTTCAGTTGGATCTGGTGCATTGTCACTTAGGCAAGCTGTGTTGACAGCTGCAGTGTTGGAGTTTTCAGGGGCATTGTTGATGGGAACTCATGTGACTAGTACAATGCAGAAGGGAATTCTTGTTGCTAATGTTTTTCAGGGAAAGGATACTTTGCTTTTTGCAGGGTTGCTTTCTTCACTTGCTGCTGCTGGTACTTGGTTACAGTTTGCATCATATTATGGTTGGCCGGTATCTACTACACATTGTATAGTGGGAGCAATGGTAGGGTTTGGCCTAGTTTATGGAGGTGCTGGAGCTGTATTTTGGGGTTCACTGGCAAGAGTGATTTCGTCATGGATTTTCTCGCCACTATTGGGAGCAGCAGTATCGTTCATTGTGTACAAATGCATTCGAAGGTTTGTATACAGTGCAAGTAACCCAGGACAAGCAGCAGCTGCAGCAGCACCAATTGCTGTATTTCTTGGCGTAACTGGAATTTCCTTTGCTGCTTTCCCGCTTAGCAAGAGTTTTCCAATAGCTCTAAGCCAGGCATTAGCTTGTGGAACCGTCGGGGCTTTCCTGGTCAACAGAACTATCCGTAAACAACTCGGACATCTTCTAGACAAGTCAAATACTCCACATTTGGAACCCGTCCCCCAAAACATAAGCTTCTTCTCTGATATTACAGGTCCAAAGGGTACTCAACTTGAAATAGTTTACGGAGTTTTCGGTTACATGCAGGTTTTATCAGCGTGTTTCATGTCATTTGCTCACGGTGGAAACGATGTCTCCAACGCAATAGGTCCATTGGCCGGTGCGTTAGCTATTCTACAAGGCGCAGCAAAAGGAGCTGATATAGTTATTCCGATTGATGTTCTTGCTTGGGGTGGATTTGGAATTGTTGCAGGACTAATGATGTGGGGTTATAGAGTTATAGCTACAATTGGAAAGAAAATAACGGAACTTACACCGACAAGAGGATTTGCAGCCGAGTTTGCAGCTGCTTCGGTTGTTCTGTTTGCTTCAAAGCTAGGGCTACCGATATCGGGGACACATACGCTAGTTGGTGCAGTAATGGGAGTTGGATTCGCAAGAGGATTTAACAATGTTAGATCAGAAACAGTGAAGGAGATTTGTGCTTCATGGGCTGTTACTATTCCGGTTGGCGCTACCTTATCGGTGATTTACACGTGGATTTTGACTAAGCTTTTGTCTTATGTTTTATGA
Protein sequence

>Msa1292700

MLSGQVRSNDSEEEMVMANEVNEVIINSPQEKISTQVEEYHTNSGRNSFSVNFKECLKNHASSIGGYALDGCCEFLSAGDVGTVEFFKCGACDCHRNFHRKETIAVSKDLTPISFSAPCLPQAPTPSTTRAPRGTTTSSLHLPLSEGGYILREDLEQNVHHVVEPINGGGTDGGGEGSSQSKKRFRSRFTYEQRGKMLDFAGARGWKIQKKDENVVEDFCKEIGVKLKVFKTWVQNNKHTLEGEEGSKEEIQHNEHHQHAATENGENNDEVSEMAKAFHISSRTASAITICIVMAALVFPLFMTSLGQGLALKTKMLSYGTLLFGFYMAWNIGANDVANAMGTSVGSGALSLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVANVFQGKDTLLFAGLLSSLAAAGTWLQFASYYGWPVSTTHCIVGAMVGFGLVYGGAGAVFWGSLARVISSWIFSPLLGAAVSFIVYKCIRRFVYSASNPGQAAAAAAPIAVFLGVTGISFAAFPLSKSFPIALSQALACGTVGAFLVNRTIRKQLGHLLDKSNTPHLEPVPQNISFFSDITGPKGTQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGAAKGADIVIPIDVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISGTHTLVGAVMGVGFARGFNNVRSETVKEICASWAVTIPVGATLSVIYTWILTKLLSYVL*