AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0879940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879940 MtrunA17_Chr1g0188221 92.201 359 11 1 74 415 1 359 0.0 657
Msa0879940 MtrunA17_Chr1g0188221 76.294 367 38 2 441 758 1 367 0.0 540
Msa0879940 MtrunA17_Chr1g0188231 81.351 370 47 3 74 423 1 368 0.0 571
Msa0879940 MtrunA17_Chr1g0188231 80.270 370 19 3 441 758 1 368 0.0 559
Msa0879940 MtrunA17_Chr6g0476321 70.052 384 91 3 49 415 22 398 0.0 540
Msa0879940 MtrunA17_Chr6g0476321 63.117 385 86 4 423 758 29 406 2.58e-159 469
Msa0879940 MtrunA17_Chr3g0117581 34.048 373 185 9 84 409 519 877 3.63e-47 181
Msa0879940 MtrunA17_Chr3g0117581 33.077 390 167 11 446 755 514 889 6.70e-43 168
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879940 AT4G35360.2 70.506 356 87 2 77 415 3 357 6.90e-174 505
Msa0879940 AT4G35360.2 61.475 366 91 3 444 760 3 367 1.21e-147 438
Msa0879940 AT4G35360.1 70.506 356 87 2 77 415 3 357 6.90e-174 505
Msa0879940 AT4G35360.1 61.475 366 91 3 444 760 3 367 1.21e-147 438
Msa0879940 AT2G17340.1 70.506 356 87 2 77 415 3 357 1.25e-172 502
Msa0879940 AT2G17340.1 61.538 364 90 3 444 758 3 365 2.66e-146 435
Msa0879940 AT2G17320.1 67.330 352 97 2 81 415 1 351 1.69e-161 473
Msa0879940 AT2G17320.1 60.278 360 93 3 448 758 1 359 1.03e-139 417
Msa0879940 AT2G17320.2 67.953 337 90 2 81 400 1 336 3.50e-155 457
Msa0879940 AT2G17320.2 61.128 337 81 3 448 735 1 336 1.01e-129 391
Msa0879940 AT4G35360.3 73.600 250 49 1 181 413 9 258 6.83e-123 370
Msa0879940 AT4G35360.3 62.791 258 47 2 550 758 11 268 2.89e-98 306
Msa0879940 AT4G32180.1 32.493 357 183 8 109 409 530 884 4.36e-43 169
Msa0879940 AT4G32180.1 31.622 370 162 9 476 756 530 897 3.22e-40 160
Msa0879940 AT4G32180.2 30.677 251 138 6 109 325 530 778 1.11e-28 123
Msa0879940 AT4G32180.2 29.779 272 127 7 446 666 520 778 9.07e-25 111
Msa0879940 AT4G32180.3 30.677 251 138 6 109 325 530 778 1.11e-28 123
Msa0879940 AT4G32180.3 29.779 272 127 7 446 666 520 778 9.07e-25 111

Find 152 sgRNAs with CRISPR-Local

Find 714 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAACCCTAGTTCTTTA+AGG 0.119668 6_1:-22852062 None:intergenic
TATAAGGGATACCTAGTATT+TGG 0.193542 6_1:-22843025 None:intergenic
GAAAATGAATGATATGAAAT+TGG 0.220523 6_1:-22842778 None:intergenic
GCTTTGAATGCAGGTTATTT+TGG 0.230447 6_1:+22853241 Msa0879940:intron
AGACTTGTAGCTATATGTTT+TGG 0.247458 6_1:+22855142 Msa0879940:exon
GACGAACAACATTCTCAAAT+AGG 0.282309 6_1:-22844738 None:intergenic
GACGAACAACTTTCTCAAAT+AGG 0.290027 6_1:-22852417 None:intergenic
TGAACCTATGAACTAATCTT+AGG 0.310053 6_1:-22842800 None:intergenic
GCTCCTTCGGCGTGGGAGTC+AGG 0.315802 6_1:+22845473 Msa0879940:CDS
GCTTTGAGTGCAGGTTGTTT+TGG 0.323869 6_1:+22845924 Msa0879940:intron
CGACTTGAGAATTTAGTTAG+AGG 0.325458 6_1:+22844790 Msa0879940:CDS
CGACTTGAGAATTTAGTTAG+AGG 0.325458 6_1:+22852469 Msa0879940:CDS
TCAGTATCATCCATCAATAA+AGG 0.326442 6_1:-22843670 None:intergenic
TCAGTGGGAGTGGGGACTTT+TGG 0.330545 6_1:-22851453 None:intergenic
GCTCCTTCGGCGTGGGAGTC+AGG 0.334226 6_1:+22853113 Msa0879940:CDS
AATGGTGCATGCTGAGTATT+TGG 0.337934 6_1:-22843698 None:intergenic
TAAAGAACACGCCAATTATC+AGG 0.353591 6_1:-22855111 None:intergenic
AATGGTGCATGCTGAATAAT+TGG 0.362740 6_1:-22851406 None:intergenic
CCACTCCCACTGAGTTATCT+TGG 0.363080 6_1:+22851463 Msa0879940:CDS
TATAAGGGATACCTAGTGTT+TGG 0.363679 6_1:-22849844 None:intergenic
CATTTGCAAGGGAGCTCCTT+CGG 0.363751 6_1:+22845460 Msa0879940:CDS
CATTTGCAAGGGAGCTCCTT+CGG 0.363751 6_1:+22853100 Msa0879940:CDS
TGAGGAAGTTCTTAAAGAAC+TGG 0.366642 6_1:+22844362 Msa0879940:CDS
TAACCTTTGAGCATAAATTT+CGG 0.374052 6_1:-22851674 None:intergenic
GCGGGGAACGTATTTGATCT+TGG 0.374523 6_1:+22852499 Msa0879940:CDS
ACGAACAACTTTCTCAAATA+GGG 0.385184 6_1:-22852416 None:intergenic
TCAGCTTTATTTGCAGCATC+AGG 0.385927 6_1:-22843938 None:intergenic
TCGGCTTTATTTGCAGCATC+AGG 0.396559 6_1:-22851655 None:intergenic
GTTGGTGATAATATAATAAA+CGG 0.403901 6_1:-22842843 None:intergenic
ACGAACAACATTCTCAAATA+GGG 0.405415 6_1:-22844737 None:intergenic
AGAGGATTTCCATGACTTGC+AGG 0.410355 6_1:-22851875 None:intergenic
GGTGAGATTCCCTTTGTTGA+TGG 0.411077 6_1:+22851368 Msa0879940:CDS
GCAGGGAACGTATTTGATCT+TGG 0.416285 6_1:+22844820 Msa0879940:CDS
AGAGGATCGCCATGACTTGC+AGG 0.416925 6_1:-22844185 None:intergenic
TCACTCCCACCGAGTTATCT+TGG 0.422428 6_1:+22843755 Msa0879940:CDS
ATAAGGGATACCTAGTATTT+GGG 0.422711 6_1:-22843024 None:intergenic
GGTGAGATTCCCTTTATTGA+TGG 0.426885 6_1:+22843660 Msa0879940:CDS
ATTGATGAATACAACGTTGT+TGG 0.436524 6_1:-22842980 None:intergenic
ATAAGGGATACCTAGTGTTT+GGG 0.441987 6_1:-22849843 None:intergenic
AATCTATTAATTACTAACTC+TGG 0.443425 6_1:+22853445 Msa0879940:CDS
ATCATATTTGTTGATAACTC+TGG 0.448564 6_1:+22853051 Msa0879940:CDS
GGATGAAGAAGGACGTCTCT+TGG 0.448800 6_1:+22846091 Msa0879940:CDS
GGATGAAGAAGGACGTCTCT+TGG 0.448800 6_1:+22853408 Msa0879940:CDS
CGAAGGAGCTCCCTTGCAAA+TGG 0.452323 6_1:-22845459 None:intergenic
CGAAGGAGCTCCCTTGCAAA+TGG 0.452323 6_1:-22853099 None:intergenic
ATTGATGAATGCAATGTTGT+TGG 0.456811 6_1:-22849799 None:intergenic
CTCACAGGTGCTGGAGCCAT+TGG 0.457791 6_1:+22842871 Msa0879940:CDS
TTACTCTTTCAACAACCTGC+AGG 0.458433 6_1:+22842943 Msa0879940:CDS
TAGTATTTGGGAATGATGAT+TGG 0.460420 6_1:-22843012 None:intergenic
ATTCAGCATGCACCATTCCT+TGG 0.469602 6_1:+22851412 Msa0879940:CDS
CAGTATCATCCATCAATAAA+GGG 0.471225 6_1:-22843669 None:intergenic
TAAGTCACATCATTGATAGA+AGG 0.471591 6_1:-22853278 None:intergenic
CCAAGATAACTCAGTGGGAG+TGG 0.475021 6_1:-22851463 None:intergenic
CAACACAAACTCACAGGTGC+TGG 0.479885 6_1:+22842862 Msa0879940:CDS
TAAGTCACATCATTGATAGA+AGG 0.480649 6_1:-22845961 None:intergenic
GATGAAGAAGGACGTCTCTT+GGG 0.482977 6_1:+22846092 Msa0879940:CDS
GATGAAGAAGGACGTCTCTT+GGG 0.482977 6_1:+22853409 Msa0879940:CDS
CAAGATCTACATCACTGGTA+AGG 0.485155 6_1:-22846317 None:intergenic
ACTCAGCATGCACCATTCCT+TGG 0.486421 6_1:+22843704 Msa0879940:CDS
CAAGGGAGCTCCTTCGGCGT+GGG 0.491227 6_1:+22845466 Msa0879940:CDS
CAAGGGAGCTCCTTCGGCGT+GGG 0.491227 6_1:+22853106 Msa0879940:CDS
AATGATGCAATTAAAGATGA+AGG 0.491822 6_1:+22852442 Msa0879940:CDS
AGGTAAATCATTTCCAGAGT+TGG 0.492461 6_1:-22846141 None:intergenic
GTTAATTGAAATTGTATCAA+AGG 0.499357 6_1:+22853307 Msa0879940:CDS
AATGATGCTATTGAAGATGA+AGG 0.504453 6_1:+22844763 Msa0879940:CDS
TCAAGAAATTCTGCAACCTC+AGG 0.517783 6_1:-22847026 None:intergenic
CAGCATGCACCATTCCTTGG+AGG 0.518535 6_1:+22851415 Msa0879940:CDS
TTGATGAATGCAATGTTGTT+GGG 0.521865 6_1:-22849798 None:intergenic
GAGGAACTCCTTAAAGAACT+AGG 0.526012 6_1:+22852054 Msa0879940:CDS
CAGCATGCACCATTCCTTGG+AGG 0.526434 6_1:+22843707 Msa0879940:CDS
AATCATCATTCCCAAATACT+AGG 0.528517 6_1:+22843014 Msa0879940:CDS
TAGTGTTTGGGAATGATGAT+TGG 0.531634 6_1:-22849831 None:intergenic
AAGAAAGATCCTGCAAGTCA+TGG 0.531799 6_1:+22851866 Msa0879940:CDS
AGGAACTCCTTAAAGAACTA+GGG 0.535642 6_1:+22852055 Msa0879940:CDS
TTGCAGAATTTCTTGAGTCA+CGG 0.536535 6_1:+22847033 Msa0879940:CDS
CAGTATCATCCATCAACAAA+GGG 0.542245 6_1:-22851377 None:intergenic
TGAGAGAACATACTTGTAGG+AGG 0.544156 6_1:-22851511 None:intergenic
AAGCCGAAATTTATGCTCAA+AGG 0.544878 6_1:+22851671 Msa0879940:CDS
TATATCAGAAGAAGAAGTAA+TGG 0.546147 6_1:+22843618 Msa0879940:intron
GTGAGATCATACTTGTAGGA+GGG 0.547151 6_1:-22843802 None:intergenic
CAGCACCTGTGAGTTTGTGT+TGG 0.550378 6_1:-22842861 None:intergenic
GCAGAAGCTTTCTCTAGGGA+TGG 0.550760 6_1:+22845177 Msa0879940:CDS
TCATCAGAAGGGAGCCTCCA+AGG 0.552177 6_1:-22851429 None:intergenic
CAAGATAACTCAGTGGGAGT+GGG 0.552274 6_1:-22851462 None:intergenic
GCTAATTGAAATTATATCAA+AGG 0.552577 6_1:+22845990 Msa0879940:CDS
AGCTTGCAGAAGCTTTCTCT+AGG 0.552796 6_1:+22845172 Msa0879940:intron
GAGAGAACATACTTGTAGGA+GGG 0.554100 6_1:-22851510 None:intergenic
ATTTGATCTTGGTTCTCCCC+AGG 0.554481 6_1:+22844831 Msa0879940:CDS
ATTTGATCTTGGTTCTCCCC+AGG 0.554481 6_1:+22852510 Msa0879940:CDS
TGAGATCATACTTGTAGGAG+GGG 0.554989 6_1:-22843801 None:intergenic
GCAAGGGAGCTCCTTCGGCG+TGG 0.555601 6_1:+22845465 Msa0879940:CDS
GCAAGGGAGCTCCTTCGGCG+TGG 0.555601 6_1:+22853105 Msa0879940:CDS
AAAATCTTCTCCCTCGACCA+TGG 0.556892 6_1:+22845223 Msa0879940:CDS
TTCCAGTTAAAGGATGAAGA+AGG 0.557052 6_1:+22853397 Msa0879940:intron
TCATCGATAATCCATGGTCG+AGG 0.558003 6_1:-22845234 None:intergenic
GCTTCTATGCAGACTTTGCG+AGG 0.558268 6_1:+22852035 Msa0879940:intron
GGCAATTAGTACACCACAGT+TGG 0.563237 6_1:+22851347 Msa0879940:CDS
GGCAAGTAGTAGATCACAGT+TGG 0.563650 6_1:+22843639 Msa0879940:CDS
AACTTTCTCAAATAGGGAGA+TGG 0.564795 6_1:-22852410 None:intergenic
AATGACAAGATCTACATCAC+TGG 0.566355 6_1:-22853670 None:intergenic
AGAGAACATACTTGTAGGAG+GGG 0.566453 6_1:-22851509 None:intergenic
TACTCTTTCAACAACCTGCA+GGG 0.566925 6_1:+22842944 Msa0879940:CDS
AAGATCTACATCACTGGTAA+GGG 0.573418 6_1:-22846316 None:intergenic
TGTGAGATCATACTTGTAGG+AGG 0.573650 6_1:-22843803 None:intergenic
AATGACAAGATCTACATCAC+TGG 0.576486 6_1:-22846322 None:intergenic
AAGAAAGATCCTGCAAGTCA+TGG 0.579855 6_1:+22844176 Msa0879940:CDS
AGAAGGGAGCCTCCAAGGAA+TGG 0.580030 6_1:-22851424 None:intergenic
AAACCTGACTCCCACGCCGA+AGG 0.580767 6_1:-22845476 None:intergenic
TTTATCAGAAGAAGAAGCAA+TGG 0.580992 6_1:+22851326 Msa0879940:intron
AGAAGGGAACCTCCAAGGAA+TGG 0.582699 6_1:-22843716 None:intergenic
CATTTATTATGACAGGGTCG+TGG 0.582862 6_1:+22854713 Msa0879940:intron
ATACCTGACTCCCACGCCGA+AGG 0.585504 6_1:-22853116 None:intergenic
TTGCAAAATTTCTTAAATCG+CGG 0.585894 6_1:+22854917 Msa0879940:CDS
GAACAGAGAGTTAACCCTGC+AGG 0.586729 6_1:-22842958 None:intergenic
AGGAGGGGATACCACTGTCT+AGG 0.589365 6_1:-22843786 None:intergenic
ATGAAGGAATACAATTCCAA+TGG 0.589602 6_1:-22842887 None:intergenic
TCAGTATCATCCATCAACAA+AGG 0.590403 6_1:-22851378 None:intergenic
GCAGGTTATTGATCTTACAA+AGG 0.592904 6_1:+22846275 Msa0879940:intron
GCTTGCAGAAGCTTTCTCTA+GGG 0.594621 6_1:+22845173 Msa0879940:intron
GAGGAAGTTCTTAAAGAACT+GGG 0.598212 6_1:+22844363 Msa0879940:CDS
AAGATAACTCAGTGGGAGTG+GGG 0.600655 6_1:-22851461 None:intergenic
TCAAGGTCATCGATAATCCA+TGG 0.602984 6_1:-22845240 None:intergenic
ACTCAGGATTGAGATCAGTA+AGG 0.603841 6_1:-22855028 None:intergenic
TGCCAGTTAAAGGATGAAGA+AGG 0.608692 6_1:+22846080 Msa0879940:intron
TCATCAGAAGGGAACCTCCA+AGG 0.615232 6_1:-22843721 None:intergenic
AGAGCAAAATCGCAAATCGT+AGG 0.615773 6_1:-22855004 None:intergenic
GAACATACAAGGATATCAAG+AGG 0.620851 6_1:-22844203 None:intergenic
GAACATACAAGGATATCAAG+AGG 0.620851 6_1:-22851893 None:intergenic
AATCATCATTCCCAAACACT+AGG 0.622439 6_1:+22849833 Msa0879940:CDS
TATCACCAACACAAACTCAC+AGG 0.623544 6_1:+22842856 Msa0879940:CDS
CGATTCTATGAAGATTGCAA+TGG 0.624387 6_1:+22846898 Msa0879940:CDS
ACTACACGTGGATCATCAGA+AGG 0.625437 6_1:-22843733 None:intergenic
TTTATCCAAGATAACTCGGT+GGG 0.627208 6_1:-22843760 None:intergenic
TTAATCCAAGATAACTCAGT+GGG 0.634666 6_1:-22851468 None:intergenic
ATTAATCCAAGATAACTCAG+TGG 0.635903 6_1:-22851469 None:intergenic
CATCGATAATCCATGGTCGA+GGG 0.636580 6_1:-22845233 None:intergenic
GAGATTTATCCAAGATAACT+CGG 0.639617 6_1:-22843764 None:intergenic
AGATATCTTCAAGAAAGTCA+AGG 0.640034 6_1:+22844392 Msa0879940:CDS
GCTTCTATGTAGACTTCGTG+AGG 0.640274 6_1:+22844344 Msa0879940:intron
CTTACAGGTGAAACATCCTG+AGG 0.644122 6_1:+22847010 Msa0879940:intron
AGATATCTTCGAGAAAGTCA+AGG 0.645655 6_1:+22852083 Msa0879940:CDS
AAAGGGAATCTCACCAACTG+TGG 0.651094 6_1:-22851360 None:intergenic
ACAGAATGAAGAGAATGCAA+AGG 0.651422 6_1:+22852387 Msa0879940:intron
ACAGGCTGAAGAGAATGCAA+AGG 0.653718 6_1:+22844708 Msa0879940:intron
CAAGATCTACATCACTGGCA+AGG 0.663338 6_1:-22853665 None:intergenic
CATCTCTTATGACAGGGGCG+CGG 0.667603 6_1:+22846842 Msa0879940:intron
TGGATAAATCTCCTAGACAG+TGG 0.682304 6_1:+22843775 Msa0879940:CDS
AGGAAGTTCTTAAAGAACTG+GGG 0.687598 6_1:+22844364 Msa0879940:CDS
TGATTCTATGAAGATTGCAA+TGG 0.691158 6_1:+22854769 Msa0879940:CDS
TCGGTGGGAGTGACTACACG+TGG 0.696965 6_1:-22843745 None:intergenic
ATTTATCCAAGATAACTCGG+TGG 0.722264 6_1:-22843761 None:intergenic
CTACACGTGGATCATCAGAA+GGG 0.724492 6_1:-22843732 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAATAAATTAATA+AGG + chr6_1:22850231-22850250 Msa0879940:intron 0.0%
!!! ATTAATTTTTAGCTTTTATT+TGG + chr6_1:22843882-22843901 Msa0879940:intron 10.0%
!! ATATGAATTATTATAAATCT+TGG - chr6_1:22844674-22844693 None:intergenic 10.0%
!!! AATTAATTTCAACAAATTTT+TGG + chr6_1:22846020-22846039 Msa0879940:intron 10.0%
!! TGAGAAAAATAAAATAAAAT+AGG + chr6_1:22848354-22848373 Msa0879940:intron 10.0%
!! CTAAATAAATAATTAATTGA+TGG + chr6_1:22848426-22848445 Msa0879940:intron 10.0%
!!! TGATTTTATCAAATTATTAA+CGG + chr6_1:22849557-22849576 Msa0879940:intron 10.0%
!! ATTAAATAAATTAATAAGGT+CGG + chr6_1:22850235-22850254 Msa0879940:intron 10.0%
!! AATATAAAGTGATTTATATT+TGG + chr6_1:22851011-22851030 Msa0879940:intron 10.0%
!!! AATTAATTTCAACAAATTTT+TGG + chr6_1:22846020-22846039 Msa0879940:intron 10.0%
!! TAACAACATTAATGATATAA+GGG - chr6_1:22843043-22843062 None:intergenic 15.0%
!! ATAACAACATTAATGATATA+AGG - chr6_1:22843044-22843063 None:intergenic 15.0%
!!! TATATCAAACATTTTAGTAT+TGG - chr6_1:22844264-22844283 None:intergenic 15.0%
!!! AATAAATTCATTTTGAGAAA+AGG - chr6_1:22845041-22845060 None:intergenic 15.0%
!!! CATAATCAATTTATTTTTCA+TGG + chr6_1:22845382-22845401 Msa0879940:intron 15.0%
!! ATTAAGTGTATTATAGTAAA+AGG + chr6_1:22846592-22846611 Msa0879940:intron 15.0%
!!! TTTTTTCTTTTTTGTGAAAT+TGG + chr6_1:22847439-22847458 Msa0879940:intron 15.0%
!! TAACAACATTAATGATATAA+GGG - chr6_1:22843043-22843062 None:intergenic 15.0%
!! ATAACAACATTAATGATATA+AGG - chr6_1:22843044-22843063 None:intergenic 15.0%
!! TTATATGATTAATGTTATCA+TGG + chr6_1:22849893-22849912 Msa0879940:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr6_1:22850565-22850584 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr6_1:22850564-22850583 Msa0879940:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr6_1:22850588-22850607 Msa0879940:intron 15.0%
!! AAAGACATTCAAATAATTAA+AGG + chr6_1:22850964-22850983 Msa0879940:intron 15.0%
!! AAGACATTCAAATAATTAAA+GGG + chr6_1:22850965-22850984 Msa0879940:intron 15.0%
!! AAATCACTTTATATTCAATT+CGG - chr6_1:22851006-22851025 None:intergenic 15.0%
!! ACACTAAAAATAAAATTTAG+AGG + chr6_1:22851071-22851090 Msa0879940:intron 15.0%
!!! ATTAATTTTTAGCTTTGATT+TGG + chr6_1:22851599-22851618 Msa0879940:intron 15.0%
!!! AATTGTTGTTAATTGTAATA+TGG + chr6_1:22851787-22851806 Msa0879940:intron 15.0%
!!! AAATAATTTATTTTGAGCTA+AGG - chr6_1:22852700-22852719 None:intergenic 15.0%
!!! AACATTTTGTTTGTTATATT+AGG + chr6_1:22853498-22853517 Msa0879940:intron 15.0%
!! TTTAGATATATAAATGTGTT+TGG - chr6_1:22853843-22853862 None:intergenic 15.0%
!! ATAAATAAAAAACAATGAAG+GGG - chr6_1:22854132-22854151 None:intergenic 15.0%
!! GATAAATAAAAAACAATGAA+GGG - chr6_1:22854133-22854152 None:intergenic 15.0%
!! CAATATTAAGTTATTAACTA+TGG + chr6_1:22854208-22854227 Msa0879940:intron 15.0%
!!! ATGTAATTTTGTATGTTTTA+CGG + chr6_1:22854496-22854515 Msa0879940:intron 15.0%
!!! AAAACATAAACAATTTTGAA+CGG - chr6_1:22855076-22855095 None:intergenic 15.0%
!! GAAAATGAATGATATGAAAT+TGG - chr6_1:22842781-22842800 None:intergenic 20.0%
!!! GTTGGTGATAATATAATAAA+CGG - chr6_1:22842846-22842865 None:intergenic 20.0%
!! TATCATTAATGTTGTTATCA+TGG + chr6_1:22843046-22843065 Msa0879940:intron 20.0%
!! AACAATAAATTTGAATGTAG+AGG + chr6_1:22843281-22843300 Msa0879940:intron 20.0%
!!! TTTTCAATGTCATTAAGATA+GGG + chr6_1:22844607-22844626 Msa0879940:intron 20.0%
!!! TAAATCATATAGTTCCATTT+TGG + chr6_1:22844648-22844667 Msa0879940:intron 20.0%
!! ATAAATAAATGTCTTCTAGT+AGG - chr6_1:22845066-22845085 None:intergenic 20.0%
!!! TATCATATTTGTTGATAACT+CGG + chr6_1:22845410-22845429 Msa0879940:intron 20.0%
!!! AAGAACATATAACTTTGTTT+TGG - chr6_1:22845564-22845583 None:intergenic 20.0%
!!! ATTTCAAAAAGCTTTAAAAG+TGG - chr6_1:22845896-22845915 None:intergenic 20.0%
!! GCTAATTGAAATTATATCAA+AGG + chr6_1:22845990-22846009 Msa0879940:CDS 20.0%
!!! AACATTTTGTTTGCTATATT+AGG + chr6_1:22846182-22846201 Msa0879940:intron 20.0%
!!! ATTGTATGCTTTTTCTATTT+GGG + chr6_1:22846377-22846396 Msa0879940:intron 20.0%
!!! TTATAAATCAATATTGACTG+TGG + chr6_1:22846504-22846523 Msa0879940:intron 20.0%
!!! ATTAAAAGTACGAAGTTTAT+TGG + chr6_1:22846626-22846645 Msa0879940:intron 20.0%
!! AAATTGAATTGAGAATTTCA+TGG + chr6_1:22847186-22847205 Msa0879940:intron 20.0%
!!! ATGAATTTGTTTGATTATCA+AGG + chr6_1:22847303-22847322 Msa0879940:intron 20.0%
!!! TGAATTTGTTTGATTATCAA+GGG + chr6_1:22847304-22847323 Msa0879940:intron 20.0%
!! AACCTTAATTGGATAAAATA+TGG - chr6_1:22847359-22847378 None:intergenic 20.0%
!! AGTCAATGATTTGAAAAATT+GGG - chr6_1:22847420-22847439 None:intergenic 20.0%
!! AAGTCAATGATTTGAAAAAT+TGG - chr6_1:22847421-22847440 None:intergenic 20.0%
!!! TTTTTTTTCCTTTTCAGTTT+TGG - chr6_1:22847539-22847558 None:intergenic 20.0%
!! ATGACAAAGTTATAAAGAAT+TGG + chr6_1:22847723-22847742 Msa0879940:intron 20.0%
!!! AATTACTGTTTTAGTTAGAA+CGG + chr6_1:22847831-22847850 Msa0879940:intron 20.0%
!! ATAGAATAGAATTCATAACA+AGG - chr6_1:22848231-22848250 None:intergenic 20.0%
!! AATCATATACAAATAGTATG+TGG + chr6_1:22848395-22848414 Msa0879940:intron 20.0%
!! AATAAGAATTTAGGTCAAAT+AGG + chr6_1:22848660-22848679 Msa0879940:intron 20.0%
!! ATAAGAATTTAGGTCAAATA+GGG + chr6_1:22848661-22848680 Msa0879940:intron 20.0%
!!! GTAACAAATGAAACATTTTA+AGG + chr6_1:22848766-22848785 Msa0879940:intron 20.0%
!!! TCTTTTTTACCTAAAACAAA+TGG - chr6_1:22848855-22848874 None:intergenic 20.0%
!!! TTTGTTTTAGGTAAAAAAGA+AGG + chr6_1:22848855-22848874 Msa0879940:intron 20.0%
!!! TTGTTTTAGGTAAAAAAGAA+GGG + chr6_1:22848856-22848875 Msa0879940:intron 20.0%
!! TATTTAATATCAAGTTTGAG+TGG - chr6_1:22849425-22849444 None:intergenic 20.0%
!! TTTAGTGTAATTATATGTGT+CGG - chr6_1:22849532-22849551 None:intergenic 20.0%
!!! GTTGGTGATAATATAATAAA+TGG - chr6_1:22842846-22842865 None:intergenic 20.0%
!! TATCATTAATGTTGTTATCA+TGG + chr6_1:22843046-22843065 Msa0879940:intron 20.0%
!!! ATTTTAGCCTAAAATGTTTA+AGG - chr6_1:22850282-22850301 None:intergenic 20.0%
!!! GATTATTAAAAATTCCGTTT+TGG - chr6_1:22850349-22850368 None:intergenic 20.0%
!!! ACGGAATTTTTAATAATCAA+AGG + chr6_1:22850351-22850370 Msa0879940:intron 20.0%
!!! ACAATTTCTAAGTTTCATTT+TGG - chr6_1:22850378-22850397 None:intergenic 20.0%
!! TAAAAATAACTAGGCTTAAT+TGG - chr6_1:22850416-22850435 None:intergenic 20.0%
!!! AATTAAGCCTAGTTATTTTT+AGG + chr6_1:22850415-22850434 Msa0879940:intron 20.0%
!!! ATTAAGCCTAGTTATTTTTA+GGG + chr6_1:22850416-22850435 Msa0879940:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr6_1:22850531-22850550 Msa0879940:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr6_1:22850574-22850593 None:intergenic 20.0%
!! ATATTTATATGACACTAACT+GGG - chr6_1:22850860-22850879 None:intergenic 20.0%
!! TATATTTATATGACACTAAC+TGG - chr6_1:22850861-22850880 None:intergenic 20.0%
!! AATATGAACATATGTTTGTT+TGG - chr6_1:22851217-22851236 None:intergenic 20.0%
!! TGTATGTATAATGTATGATA+AGG + chr6_1:22851239-22851258 Msa0879940:intron 20.0%
!! AACAACAATTTGAATTACTT+AGG - chr6_1:22851777-22851796 None:intergenic 20.0%
!!! TGTAATATGGAATCTTATTT+TGG + chr6_1:22851800-22851819 Msa0879940:intron 20.0%
!! TTAATGAGATTGATATGTAA+TGG - chr6_1:22852293-22852312 None:intergenic 20.0%
!! ATACGAATTATTACAAATCT+TGG - chr6_1:22852353-22852372 None:intergenic 20.0%
!! TAAAAATACAAACAAAATCG+CGG + chr6_1:22852594-22852613 Msa0879940:intron 20.0%
!! CATGAAAAAGAAATTGATTA+TGG - chr6_1:22853024-22853043 None:intergenic 20.0%
!!! CATAATCAATTTCTTTTTCA+TGG + chr6_1:22853022-22853041 Msa0879940:intron 20.0%
!!! TATAACTTTGTTTTTGCAAT+TGG - chr6_1:22853197-22853216 None:intergenic 20.0%
!! GTTAATTGAAATTGTATCAA+AGG + chr6_1:22853307-22853326 Msa0879940:CDS 20.0%
!! AATCTATTAATTACTAACTC+TGG + chr6_1:22853445-22853464 Msa0879940:CDS 20.0%
!!! TTTGTTATATTAGGAAATTC+TGG + chr6_1:22853507-22853526 Msa0879940:intron 20.0%
!! CGATAAATAAAAAACAATGA+AGG - chr6_1:22854134-22854153 None:intergenic 20.0%
!!! TAGGATTTTAAGATTCTAAT+AGG - chr6_1:22854988-22855007 None:intergenic 20.0%
!!! AAACATAAACAATTTTGAAC+GGG - chr6_1:22855075-22855094 None:intergenic 20.0%
!!! TTTTCCTAAGATTAGTTCAT+AGG + chr6_1:22842796-22842815 Msa0879940:five_prime_UTR 25.0%
!! AGTTCATAGGTTCATTTTAA+TGG + chr6_1:22842809-22842828 Msa0879940:exon 25.0%
! CATCATGTTAGAATCAATAT+TGG + chr6_1:22843323-22843342 Msa0879940:intron 25.0%
!!! TGTATGTTTGATTTCACTTT+TGG - chr6_1:22843426-22843445 None:intergenic 25.0%
! TATATCAGAAGAAGAAGTAA+TGG + chr6_1:22843618-22843637 Msa0879940:intron 25.0%
!!! TTTTAGCTTTTATTTGGTAC+AGG + chr6_1:22843888-22843907 Msa0879940:intron 25.0%
! AACAACAATTTGAATTACCT+AGG - chr6_1:22844088-22844107 None:intergenic 25.0%
! TTTGTGCATTCATTTCAAAA+AGG + chr6_1:22844129-22844148 Msa0879940:intron 25.0%
! ACAACGAATAAAGAGAATAA+GGG - chr6_1:22844312-22844331 None:intergenic 25.0%
! AAGATTAAGAAAACAATCTG+CGG + chr6_1:22844416-22844435 Msa0879940:intron 25.0%
!! AATACTATTCAGCCAAATTT+TGG + chr6_1:22844457-22844476 Msa0879940:intron 25.0%
! CATACAATTCTTCCAAAATT+TGG - chr6_1:22844472-22844491 None:intergenic 25.0%
! AAGAATTGTATGTGTATATC+TGG + chr6_1:22844480-22844499 Msa0879940:intron 25.0%
!! AATGCATTCTTTTCATGATT+TGG + chr6_1:22844555-22844574 Msa0879940:intron 25.0%
!! CTTTTCAATGTCATTAAGAT+AGG + chr6_1:22844606-22844625 Msa0879940:intron 25.0%
! TTTCAATGTCATTAAGATAG+GGG + chr6_1:22844608-22844627 Msa0879940:intron 25.0%
! ATTATAAATCTTGGCCAAAA+TGG - chr6_1:22844665-22844684 None:intergenic 25.0%
! ATATATGATTTGAATGCAAC+AGG + chr6_1:22844690-22844709 Msa0879940:intron 25.0%
!! TATGTAATTTTGTTCACTTC+TGG + chr6_1:22844869-22844888 Msa0879940:intron 25.0%
!! TTTTATAACCATCTCTTTCT+CGG - chr6_1:22844956-22844975 None:intergenic 25.0%
! GAGATGGTTATAAAATTAAC+CGG + chr6_1:22844961-22844980 Msa0879940:intron 25.0%
! ATCAACTATTCATATAGTTC+CGG - chr6_1:22844983-22845002 None:intergenic 25.0%
! ATATATAATCCTCCAAACAT+TGG - chr6_1:22845105-22845124 None:intergenic 25.0%
!! ATCTGATTTTCAAAATGTCA+AGG - chr6_1:22845260-22845279 None:intergenic 25.0%
!!! TTGACATTTTGAAAATCAGA+TGG + chr6_1:22845259-22845278 Msa0879940:CDS 25.0%
!!! ATCAATTTATTTTTCATGGC+AGG + chr6_1:22845386-22845405 Msa0879940:intron 25.0%
!!! ATCATATTTGTTGATAACTC+GGG + chr6_1:22845411-22845430 Msa0879940:intron 25.0%
!! TATCTTTCAAACGTATTTTC+TGG + chr6_1:22845516-22845535 Msa0879940:intron 25.0%
! AAAAAGCCACATAATTTAAG+TGG - chr6_1:22845632-22845651 None:intergenic 25.0%
!! TTTCTGAAAAACAATCTTAC+AGG - chr6_1:22846164-22846183 None:intergenic 25.0%
!! TCTGGTTTCTTTATAGTTTA+TGG + chr6_1:22846209-22846228 Msa0879940:intron 25.0%
!!! TAGATCTTGTCATTTTAGAA+GGG + chr6_1:22846331-22846350 Msa0879940:CDS 25.0%
!!! CATTGTATGCTTTTTCTATT+TGG + chr6_1:22846376-22846395 Msa0879940:intron 25.0%
! GATTTATAAAAGTGACAGAA+AGG - chr6_1:22846493-22846512 None:intergenic 25.0%
!!! TTCCTTTCTAGTTTCTTTTA+AGG - chr6_1:22846674-22846693 None:intergenic 25.0%
! TAACTAAATACACCTATTGA+AGG - chr6_1:22846774-22846793 None:intergenic 25.0%
! CAATAATTCTTGTCAGAAAT+TGG + chr6_1:22846796-22846815 Msa0879940:intron 25.0%
!!! TCTGTCATTATTTTTCTTAC+AGG + chr6_1:22846995-22847014 Msa0879940:intron 25.0%
! CTAATCTGTATATGATCAAA+TGG - chr6_1:22847159-22847178 None:intergenic 25.0%
!!! ATTTGAGGTAATGTTGTTTT+AGG + chr6_1:22847225-22847244 Msa0879940:intron 25.0%
!!! AATGTTGTTTTAGGAATAAG+AGG + chr6_1:22847234-22847253 Msa0879940:intron 25.0%
!!! ATGTTGTTTTAGGAATAAGA+GGG + chr6_1:22847235-22847254 Msa0879940:intron 25.0%
!! CTCCATATTTTATCCAATTA+AGG + chr6_1:22847354-22847373 Msa0879940:intron 25.0%
! GTGAAATTGGAATAGAAATA+TGG + chr6_1:22847452-22847471 Msa0879940:intron 25.0%
!! TATCCTCAGATTTTCTAATA+CGG - chr6_1:22847788-22847807 None:intergenic 25.0%
! TATTAGAAAATCTGAGGATA+AGG + chr6_1:22847788-22847807 Msa0879940:intron 25.0%
!!! ATTACTGTTTTAGTTAGAAC+GGG + chr6_1:22847832-22847851 Msa0879940:intron 25.0%
! TCATTGTAGCAAATATATGT+AGG + chr6_1:22848179-22848198 Msa0879940:intron 25.0%
! CATTGTAGCAAATATATGTA+GGG + chr6_1:22848180-22848199 Msa0879940:intron 25.0%
! TTCTATTCTATATGTGTGAT+TGG + chr6_1:22848240-22848259 Msa0879940:intron 25.0%
!! ATTTTTCTCAAATAGTCTAG+TGG - chr6_1:22848344-22848363 None:intergenic 25.0%
! TAGGATATATATTATGCATG+AGG + chr6_1:22848579-22848598 Msa0879940:intron 25.0%
! AGGATATATATTATGCATGA+GGG + chr6_1:22848580-22848599 Msa0879940:intron 25.0%
! GATACCTTCAATAAGAATTT+AGG + chr6_1:22848651-22848670 Msa0879940:intron 25.0%
! TTGACCTAAATTCTTATTGA+AGG - chr6_1:22848658-22848677 None:intergenic 25.0%
! CCTCTAATGAGATAAAATTA+GGG + chr6_1:22848922-22848941 Msa0879940:intron 25.0%
! CTCTAATGAGATAAAATTAG+GGG + chr6_1:22848923-22848942 Msa0879940:intron 25.0%
! ACTAATTAACGTCATTCTAA+AGG + chr6_1:22849239-22849258 Msa0879940:intron 25.0%
! CTAATTAACGTCATTCTAAA+GGG + chr6_1:22849240-22849259 Msa0879940:intron 25.0%
!! TAATTAACGTCATTCTAAAG+GGG + chr6_1:22849241-22849260 Msa0879940:intron 25.0%
! TGCTTGTGTAAAATGAAAAT+GGG - chr6_1:22849326-22849345 None:intergenic 25.0%
! TTGCTTGTGTAAAATGAAAA+TGG - chr6_1:22849327-22849346 None:intergenic 25.0%
! TATAGCTATCAACTAATCTT+AGG - chr6_1:22849464-22849483 None:intergenic 25.0%
! TATTAAAATGAAGCTGGATA+TGG - chr6_1:22849624-22849643 None:intergenic 25.0%
!!! TGTTTTATGGTTGTTGTTTA+TGG + chr6_1:22850027-22850046 Msa0879940:intron 25.0%
!!! GTTTATGGATTTTTTTTCCT+TGG + chr6_1:22850042-22850061 Msa0879940:intron 25.0%
! TCAACATTCATAAAAATCCA+AGG - chr6_1:22850062-22850081 None:intergenic 25.0%
! AAAGATGAAGAAGAAATAGA+AGG + chr6_1:22850110-22850129 Msa0879940:intron 25.0%
! AAGGAAAGAAAAATCAATGT+TGG + chr6_1:22850147-22850166 Msa0879940:intron 25.0%
!!! ATTGATTTTGCATGATTGAA+GGG + chr6_1:22850188-22850207 Msa0879940:intron 25.0%
! ATGAAACTTAGAAATTGTTG+AGG + chr6_1:22850380-22850399 Msa0879940:intron 25.0%
! TGAAACTTAGAAATTGTTGA+GGG + chr6_1:22850381-22850400 Msa0879940:intron 25.0%
! TCAATAGAATTAATCAAAGC+AGG - chr6_1:22850744-22850763 None:intergenic 25.0%
! AGAAGAATCATTCAATCAAA+TGG - chr6_1:22850933-22850952 None:intergenic 25.0%
! ATGTTCTCTCAAAACAAAAT+TGG + chr6_1:22851523-22851542 Msa0879940:intron 25.0%
! TGTTCTCTCAAAACAAAATT+GGG + chr6_1:22851524-22851543 Msa0879940:intron 25.0%
! TAACCTTTGAGCATAAATTT+CGG - chr6_1:22851677-22851696 None:intergenic 25.0%
!! CTCTTATTATTTCATTGGTT+AGG + chr6_1:22851703-22851722 Msa0879940:intron 25.0%
! TTGGTTCATTTCTTTCAAAA+AGG + chr6_1:22851819-22851838 Msa0879940:intron 25.0%
! AAATGAGGTAAAACACATAA+GGG - chr6_1:22851987-22852006 None:intergenic 25.0%
! AAAATGAGGTAAAACACATA+AGG - chr6_1:22851988-22852007 None:intergenic 25.0%
! AAAAGAATAAGGAGAAAATG+AGG - chr6_1:22852002-22852021 None:intergenic 25.0%
!! TCATTTTCTCCTTATTCTTT+TGG + chr6_1:22852001-22852020 Msa0879940:intron 25.0%
! GAACAAAAACCAAAAGAATA+AGG - chr6_1:22852013-22852032 None:intergenic 25.0%
! AAGTTAAAACGAACAATCTA+CGG + chr6_1:22852107-22852126 Msa0879940:intron 25.0%
! CCAACAAAATTATGAAAAGA+AGG - chr6_1:22852248-22852267 None:intergenic 25.0%
!! CCTTCTTTTCATAATTTTGT+TGG + chr6_1:22852245-22852264 Msa0879940:intron 25.0%
!! GTGTTAAATTTGTTCAACTT+TGG - chr6_1:22844581-22844600 None:intergenic 25.0%
! CATATCAATCTCATTAAGAT+AGG + chr6_1:22852296-22852315 Msa0879940:intron 25.0%
! AATGATGCAATTAAAGATGA+AGG + chr6_1:22852442-22852461 Msa0879940:CDS 25.0%
!! TTTAGTTAGAGGAATTTTTG+CGG + chr6_1:22844801-22844820 Msa0879940:CDS 25.0%
! GAAAAAAATTAAACTACCTG+GGG - chr6_1:22852529-22852548 None:intergenic 25.0%
! CGAAAAAAATTAAACTACCT+GGG - chr6_1:22852530-22852549 None:intergenic 25.0%
! ACGAAAAAAATTAAACTACC+TGG - chr6_1:22852531-22852550 None:intergenic 25.0%
!! TATGAATAGTTGATTCAGTA+TGG + chr6_1:22844989-22845008 Msa0879940:intron 25.0%
!! ATAAGTCTTACGATGTATTT+TGG + chr6_1:22852986-22853005 Msa0879940:intron 25.0%
!!! ATCATATTTGTTGATAACTC+TGG + chr6_1:22845411-22845430 Msa0879940:intron 25.0%
!! GTTTCTGAAAAAAATCTTAC+AGG - chr6_1:22853481-22853500 None:intergenic 25.0%
!! TCTGGTTTCTTTATAGTTTA+TGG + chr6_1:22846209-22846228 Msa0879940:intron 25.0%
! AAAAAACAAAGGGAGTAAAT+AGG - chr6_1:22853770-22853789 None:intergenic 25.0%
!!! TCCCTTTGTTTTTTTGTTTT+TGG + chr6_1:22853776-22853795 Msa0879940:intron 25.0%
! CCCAAAAACAAAAAAACAAA+GGG - chr6_1:22853780-22853799 None:intergenic 25.0%
!!! CCCTTTGTTTTTTTGTTTTT+GGG + chr6_1:22853777-22853796 Msa0879940:intron 25.0%
! ACCCAAAAACAAAAAAACAA+AGG - chr6_1:22853781-22853800 None:intergenic 25.0%
! TATATCTAAATCCAACGATT+TGG + chr6_1:22853853-22853872 Msa0879940:intron 25.0%
! ATATCTAAATCCAACGATTT+GGG + chr6_1:22853854-22853873 Msa0879940:intron 25.0%
! GTAATGTGAAAATTGAACAT+AGG - chr6_1:22853938-22853957 None:intergenic 25.0%
!! ATTTTCACATTACAATCCTT+TGG + chr6_1:22853945-22853964 Msa0879940:intron 25.0%
! AGATTCAATTCCATTAAACA+CGG - chr6_1:22853979-22853998 None:intergenic 25.0%
!!! CATATTTTGAACCAACTTAT+GGG - chr6_1:22854005-22854024 None:intergenic 25.0%
!!! TCATATTTTGAACCAACTTA+TGG - chr6_1:22854006-22854025 None:intergenic 25.0%
!! CTTTAGTATTGAAGTTGTAT+TGG - chr6_1:22854086-22854105 None:intergenic 25.0%
!! ATCAAAAGTACAATGCTTAT+TGG + chr6_1:22854331-22854350 Msa0879940:intron 25.0%
! AAATTAAGCGACAACTAAAA+AGG + chr6_1:22854375-22854394 Msa0879940:intron 25.0%
! CAATACTAAGATCTATTGTT+CGG + chr6_1:22854428-22854447 Msa0879940:intron 25.0%
! CTTCTTAAAATACGAGAAAT+TGG + chr6_1:22846943-22846962 Msa0879940:intron 25.0%
!! TTTAAGAAATTTTGCAACTC+CGG - chr6_1:22854914-22854933 None:intergenic 25.0%
! TTGCAAAATTTCTTAAATCG+CGG + chr6_1:22854917-22854936 Msa0879940:CDS 25.0%
TGAACCTATGAACTAATCTT+AGG - chr6_1:22842803-22842822 None:intergenic 30.0%
ATGAAGGAATACAATTCCAA+TGG - chr6_1:22842890-22842909 None:intergenic 30.0%
! TGAAATGATGATGATGATGA+AGG - chr6_1:22842906-22842925 None:intergenic 30.0%
ATTGATGAATACAACGTTGT+TGG - chr6_1:22842983-22843002 None:intergenic 30.0%
TAGTATTTGGGAATGATGAT+TGG - chr6_1:22843015-22843034 None:intergenic 30.0%
AATCATCATTCCCAAATACT+AGG + chr6_1:22843014-22843033 Msa0879940:CDS 30.0%
ATAAGGGATACCTAGTATTT+GGG - chr6_1:22843027-22843046 None:intergenic 30.0%
TATAAGGGATACCTAGTATT+TGG - chr6_1:22843028-22843047 None:intergenic 30.0%
TCTAACATGATGCTAGAATT+TGG - chr6_1:22843315-22843334 None:intergenic 30.0%
CATGTTAGAATCAATATTGG+AGG + chr6_1:22843326-22843345 Msa0879940:intron 30.0%
!! TTTGATTTCACTTTTGGAAG+AGG - chr6_1:22843420-22843439 None:intergenic 30.0%
TCACATGAAAAGTGACAATT+GGG + chr6_1:22843494-22843513 Msa0879940:intron 30.0%
! CAATTGGGTAATGTTACTTA+AGG + chr6_1:22843509-22843528 Msa0879940:intron 30.0%
AAAGTAAGAGTCCTAAGAAA+AGG - chr6_1:22843564-22843583 None:intergenic 30.0%
CAGTATCATCCATCAATAAA+GGG - chr6_1:22843672-22843691 None:intergenic 30.0%
TCAGTATCATCCATCAATAA+AGG - chr6_1:22843673-22843692 None:intergenic 30.0%
GAGATTTATCCAAGATAACT+CGG - chr6_1:22843767-22843786 None:intergenic 30.0%
! TTTTGTGAGATCATACTTGT+AGG - chr6_1:22843809-22843828 None:intergenic 30.0%
! AAGCTGAAATTTTTGCTCAA+AGG + chr6_1:22843954-22843973 Msa0879940:CDS 30.0%
! GAAATTTTTGCTCAAAGGTT+AGG + chr6_1:22843959-22843978 Msa0879940:intron 30.0%
ATCCTTGTATGTTCTTTATC+TGG + chr6_1:22844212-22844231 Msa0879940:intron 30.0%
CACAACGAATAAAGAGAATA+AGG - chr6_1:22844313-22844332 None:intergenic 30.0%
AGATATCTTCAAGAAAGTCA+AGG + chr6_1:22844392-22844411 Msa0879940:CDS 30.0%
ATGTGTATATCTGGTTATTG+AGG + chr6_1:22844489-22844508 Msa0879940:intron 30.0%
AACATCTTGCAGAAAGAATA+TGG + chr6_1:22844524-22844543 Msa0879940:intron 30.0%
ACATCTTGCAGAAAGAATAT+GGG + chr6_1:22844525-22844544 Msa0879940:intron 30.0%
ACGAACAACATTCTCAAATA+GGG - chr6_1:22844740-22844759 None:intergenic 30.0%
AATGATGCTATTGAAGATGA+AGG + chr6_1:22844763-22844782 Msa0879940:CDS 30.0%
! TTAGTTAGAGGAATTTTTGC+AGG + chr6_1:22844802-22844821 Msa0879940:CDS 30.0%
! TAGTTAGAGGAATTTTTGCA+GGG + chr6_1:22844803-22844822 Msa0879940:CDS 30.0%
TAGAGAAAATCAAACTACCT+GGG - chr6_1:22844851-22844870 None:intergenic 30.0%
ATAGAGAAAATCAAACTACC+TGG - chr6_1:22844852-22844871 None:intergenic 30.0%
!! CAGATTTTTAAGCAAGTGTT+AGG - chr6_1:22844913-22844932 None:intergenic 30.0%
CCTTACAAATTGTCAGTATA+TGG - chr6_1:22845015-22845034 None:intergenic 30.0%
CCATATACTGACAATTTGTA+AGG + chr6_1:22845012-22845031 Msa0879940:intron 30.0%
TACAATCATATGCCAATGTT+TGG + chr6_1:22845090-22845109 Msa0879940:intron 30.0%
TTTATGTCTTCTGACGAATT+TGG + chr6_1:22845346-22845365 Msa0879940:intron 30.0%
ATTGATTATGACACTACTCT+TGG - chr6_1:22845372-22845391 None:intergenic 30.0%
!! TTCAAACGTATTTTCTGGTA+TGG + chr6_1:22845521-22845540 Msa0879940:intron 30.0%
!!! TATAACTTTGTTTTGGCAGT+TGG - chr6_1:22845557-22845576 None:intergenic 30.0%
! TGTTGAAGTGTCTATATTTG+TGG + chr6_1:22845585-22845604 Msa0879940:intron 30.0%
GTTGAACCACTTAAATTATG+TGG + chr6_1:22845623-22845642 Msa0879940:intron 30.0%
!!! CAATTTTGTGTTTTAGCAGT+GGG + chr6_1:22845684-22845703 Msa0879940:intron 30.0%
!!! AATTTTGTGTTTTAGCAGTG+GGG + chr6_1:22845685-22845704 Msa0879940:intron 30.0%
TATAAAGCGAAATGAATTCC+AGG - chr6_1:22845780-22845799 None:intergenic 30.0%
TCGCTTTATAAAGAACTTAG+AGG + chr6_1:22845790-22845809 Msa0879940:intron 30.0%
TAAGTCACATCATTGATAGA+AGG - chr6_1:22845964-22845983 None:intergenic 30.0%
ACAGAGTTAGGAAAAAACTT+TGG - chr6_1:22846051-22846070 None:intergenic 30.0%
!! AATCTTTTAATTGCCAACTC+TGG + chr6_1:22846128-22846147 Msa0879940:CDS 30.0%
! TTTGCTATATTAGGAAGTTC+TGG + chr6_1:22846191-22846210 Msa0879940:intron 30.0%
TATGATGATTACTTTCTTGC+AGG + chr6_1:22846257-22846276 Msa0879940:intron 30.0%
!!! GTAGATCTTGTCATTTTAGA+AGG + chr6_1:22846330-22846349 Msa0879940:CDS 30.0%
TTTGTAGAAAGGGGAAAAAA+GGG - chr6_1:22846433-22846452 None:intergenic 30.0%
AGCCTTAAAAGAAACTAGAA+AGG + chr6_1:22846669-22846688 Msa0879940:intron 30.0%
! TCTCCAATTTTTCCTTCAAT+AGG + chr6_1:22846759-22846778 Msa0879940:intron 30.0%
ACACCTATTGAAGGAAAAAT+TGG - chr6_1:22846765-22846784 None:intergenic 30.0%
! TTAAGCCTGATTCTTTTACA+AGG + chr6_1:22847101-22847120 Msa0879940:intron 30.0%
CTCAAATAGTTAATTCTCAG+AGG - chr6_1:22847212-22847231 None:intergenic 30.0%
! CTCTGAGAATTAACTATTTG+AGG + chr6_1:22847210-22847229 Msa0879940:intron 30.0%
AAAATCTCGGATTTATAGTC+TGG - chr6_1:22847392-22847411 None:intergenic 30.0%
AAATTGGGAGACTAAAATCT+CGG - chr6_1:22847405-22847424 None:intergenic 30.0%
AAAATGAGCCAAAACTGAAA+AGG + chr6_1:22847528-22847547 Msa0879940:intron 30.0%
ATTGTTCGCAAATCATCATT+TGG + chr6_1:22847569-22847588 Msa0879940:intron 30.0%
ATTCCGTATTAGAAAATCTG+AGG + chr6_1:22847782-22847801 Msa0879940:intron 30.0%
CAACTCAAGCATTATTTGAT+TGG - chr6_1:22847992-22848011 None:intergenic 30.0%
GTTTAGTGTTAGATGTTAGT+TGG + chr6_1:22848095-22848114 Msa0879940:intron 30.0%
ATCCCACTTATTCATCTTTA+AGG + chr6_1:22848305-22848324 Msa0879940:intron 30.0%
CACCTTAAAGATGAATAAGT+GGG - chr6_1:22848310-22848329 None:intergenic 30.0%
TCACCTTAAAGATGAATAAG+TGG - chr6_1:22848311-22848330 None:intergenic 30.0%
! CATTTTCAAAGTACAATTGC+AGG + chr6_1:22848685-22848704 Msa0879940:intron 30.0%
!!! CATTTTAAGGTGTGTGTATA+TGG + chr6_1:22848779-22848798 Msa0879940:intron 30.0%
AAATGGTAGACTAACACATT+CGG - chr6_1:22848838-22848857 None:intergenic 30.0%
!! GTTAGTCTACCATTTGTTTT+AGG + chr6_1:22848843-22848862 Msa0879940:intron 30.0%
! CTTGTTCATTTCTTTGTTTG+AGG - chr6_1:22848886-22848905 None:intergenic 30.0%
GCCTCTAATGAGATAAAATT+AGG + chr6_1:22848921-22848940 Msa0879940:intron 30.0%
! CCCTAATTTTATCTCATTAG+AGG - chr6_1:22848925-22848944 None:intergenic 30.0%
TATTCAAACCAACTCTTGAT+GGG - chr6_1:22848973-22848992 None:intergenic 30.0%
! TATTTCTACACTCTTCTTCA+TGG - chr6_1:22849184-22849203 None:intergenic 30.0%
! GAAGAAGAGTGTAGAAATAA+TGG + chr6_1:22849185-22849204 Msa0879940:intron 30.0%
ATCTAATGCATTATGCATGT+GGG - chr6_1:22849219-22849238 None:intergenic 30.0%
TATCTAATGCATTATGCATG+TGG - chr6_1:22849220-22849239 None:intergenic 30.0%
ATAGATAGACCTAACTTCTA+AGG + chr6_1:22849276-22849295 Msa0879940:intron 30.0%
! GAAAATGGGAAGTTTTTGTT+TGG - chr6_1:22849312-22849331 None:intergenic 30.0%
! ATCTAGTTTCTCAATGTTGA+TGG - chr6_1:22849387-22849406 None:intergenic 30.0%
TCAACATTGAGAAACTAGAT+AGG + chr6_1:22849387-22849406 Msa0879940:intron 30.0%
GAGAAACTAGATAGGTATTA+AGG + chr6_1:22849395-22849414 Msa0879940:intron 30.0%
TGTCTCTATTAAAATGAAGC+TGG - chr6_1:22849630-22849649 None:intergenic 30.0%
TTGATGAATGCAATGTTGTT+GGG - chr6_1:22849801-22849820 None:intergenic 30.0%
ATTGATGAATGCAATGTTGT+TGG - chr6_1:22849802-22849821 None:intergenic 30.0%
GAAAGAAAAATCAATGTTGG+TGG + chr6_1:22850150-22850169 Msa0879940:intron 30.0%
!!! CATTGATTTTGCATGATTGA+AGG + chr6_1:22850187-22850206 Msa0879940:intron 30.0%
TTAGCCTAAAATGTTTAAGG+TGG - chr6_1:22850279-22850298 None:intergenic 30.0%
ATTAACATAGCAGACCAAAT+TGG + chr6_1:22850300-22850319 Msa0879940:intron 30.0%
! TATGTTTTCGTCAACCAATT+TGG - chr6_1:22850317-22850336 None:intergenic 30.0%
GAAACTTAGAAATTGTTGAG+GGG + chr6_1:22850382-22850401 Msa0879940:intron 30.0%
TTGGATCCCTAAAAATAACT+AGG - chr6_1:22850425-22850444 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr6_1:22850482-22850501 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr6_1:22850483-22850502 Msa0879940:intron 30.0%
! TACAGAATTGATTCTGAACT+TGG - chr6_1:22851105-22851124 None:intergenic 30.0%
AAGTTCAGAATCAATTCTGT+AGG + chr6_1:22851104-22851123 Msa0879940:intron 30.0%
! TTTGGTTTCACATTTAGAAG+AGG - chr6_1:22851199-22851218 None:intergenic 30.0%
TTTATCAGAAGAAGAAGCAA+TGG + chr6_1:22851326-22851345 Msa0879940:intron 30.0%
TTAATCCAAGATAACTCAGT+GGG - chr6_1:22851471-22851490 None:intergenic 30.0%
ATTAATCCAAGATAACTCAG+TGG - chr6_1:22851472-22851491 None:intergenic 30.0%
!! TTTTGAGAGAACATACTTGT+AGG - chr6_1:22851517-22851536 None:intergenic 30.0%
GTTCTCTCAAAACAAAATTG+GGG + chr6_1:22851525-22851544 Msa0879940:intron 30.0%
!!! TTTTAGCTTTGATTTGGTAC+AGG + chr6_1:22851605-22851624 Msa0879940:intron 30.0%
GAAATTTATGCTCAAAGGTT+AGG + chr6_1:22851676-22851695 Msa0879940:intron 30.0%
GTGGTCTCTTATTATTTCAT+TGG + chr6_1:22851698-22851717 Msa0879940:intron 30.0%
CTGATGTTCATAGAAACATT+AGG - chr6_1:22851733-22851752 None:intergenic 30.0%
! CTAATGTTTCTATGAACATC+AGG + chr6_1:22851731-22851750 Msa0879940:intron 30.0%
AATGAGGTAAAACACATAAG+GGG - chr6_1:22851986-22852005 None:intergenic 30.0%
AAGAATGGTATGTGTATATC+TGG + chr6_1:22852165-22852184 Msa0879940:intron 30.0%
ATGTGTATATCTGGTTATTG+AGG + chr6_1:22844489-22844508 Msa0879940:intron 30.0%
TAACATCTTACAGCAAGAAT+AGG + chr6_1:22852208-22852227 Msa0879940:intron 30.0%
AATCTCATTAAGATAGGAGA+TGG + chr6_1:22852302-22852321 Msa0879940:intron 30.0%
ACGAACAACTTTCTCAAATA+GGG - chr6_1:22852419-22852438 None:intergenic 30.0%
! TTAGTTAGAGGAATTTTTGC+GGG + chr6_1:22844802-22844821 Msa0879940:CDS 30.0%
ATTCTCACAAAATGAGAATG+AGG + chr6_1:22852624-22852643 Msa0879940:intron 30.0%
AACAAATTGAGGGAAGAAAA+AGG - chr6_1:22852805-22852824 None:intergenic 30.0%
!! ATCAATTTCTTTTTCATGGC+AGG + chr6_1:22853026-22853045 Msa0879940:intron 30.0%
! TCTGGTGCAGATATTATTTT+AGG + chr6_1:22853069-22853088 Msa0879940:CDS 30.0%
! TTCAACCATGTTTTCTTATC+TGG + chr6_1:22853161-22853180 Msa0879940:intron 30.0%
AACTTCCAGATAAGAAAACA+TGG - chr6_1:22853169-22853188 None:intergenic 30.0%
TAAGTCACATCATTGATAGA+AGG - chr6_1:22845964-22845983 None:intergenic 30.0%
!!! TTCTTTGTTGTTTTGTTCCT+TGG + chr6_1:22853597-22853616 Msa0879940:intron 30.0%
!!! GTAGATCTTGTCATTTTAGA+AGG + chr6_1:22846330-22846349 Msa0879940:CDS 30.0%
!!! TCTTGTCATTTTAGAAGGAA+TGG + chr6_1:22853683-22853702 Msa0879940:CDS 30.0%
AGAAAAAACATGCAATGTCA+AGG - chr6_1:22853721-22853740 None:intergenic 30.0%
!!! ACATTGCATGTTTTTTCTCT+TGG + chr6_1:22853723-22853742 Msa0879940:intron 30.0%
!!! CATTGCATGTTTTTTCTCTT+GGG + chr6_1:22853724-22853743 Msa0879940:intron 30.0%
!!! ATTGCATGTTTTTTCTCTTG+GGG + chr6_1:22853725-22853744 Msa0879940:intron 30.0%
TGTTAAATGAGCGTGTTAAA+AGG + chr6_1:22853807-22853826 Msa0879940:intron 30.0%
! GAGGTTGATTGAAGTTATAT+TGG - chr6_1:22853900-22853919 None:intergenic 30.0%
!! GACAACTAAAAAGGTATCAA+GGG + chr6_1:22854384-22854403 Msa0879940:intron 30.0%
!! ATTGAGATTCGGTGATTATA+AGG + chr6_1:22854451-22854470 Msa0879940:intron 30.0%
ACAATGAGAACTCAACAATA+TGG - chr6_1:22854605-22854624 None:intergenic 30.0%
CTGACACATTTATTATGACA+GGG + chr6_1:22854707-22854726 Msa0879940:intron 30.0%
TGATTCTATGAAGATTGCAA+TGG + chr6_1:22854769-22854788 Msa0879940:CDS 30.0%
AAATACGAGAAATTGGATAC+TGG + chr6_1:22854826-22854845 Msa0879940:intron 30.0%
!!! TGTTGTCGTTTTTCTTTTAC+AGG + chr6_1:22854879-22854898 Msa0879940:intron 30.0%
! CTTTTACAGGTGAAAAATAC+CGG + chr6_1:22854892-22854911 Msa0879940:intron 30.0%
!!! CATATTTTAGGATTCTACTC+AGG - chr6_1:22855047-22855066 None:intergenic 30.0%
! ATTTTTCTCTGCCTGATAAT+TGG + chr6_1:22855100-22855119 Msa0879940:CDS 30.0%
! AGACTTGTAGCTATATGTTT+TGG + chr6_1:22855142-22855161 Msa0879940:exon 30.0%
! GACTTGTAGCTATATGTTTT+GGG + chr6_1:22855143-22855162 Msa0879940:exon 30.0%
GTCACATGAAAAGTGACAAT+TGG + chr6_1:22843493-22843512 Msa0879940:intron 35.0%
TTTATCCAAGATAACTCGGT+GGG - chr6_1:22843763-22843782 None:intergenic 35.0%
ATTTATCCAAGATAACTCGG+TGG - chr6_1:22843764-22843783 None:intergenic 35.0%
! ATTTTTGCTCAAAGGTTAGG+TGG + chr6_1:22843962-22843981 Msa0879940:intron 35.0%
CCTCTCAAAGTAAACGAAAA+GGG - chr6_1:22844008-22844027 None:intergenic 35.0%
ACCTCTCAAAGTAAACGAAA+AGG - chr6_1:22844009-22844028 None:intergenic 35.0%
! ACCTGTTTCTCATAAACATC+AGG + chr6_1:22844046-22844065 Msa0879940:intron 35.0%
GAACATACAAGGATATCAAG+AGG - chr6_1:22844206-22844225 None:intergenic 35.0%
GTCCAGATAAAGAACATACA+AGG - chr6_1:22844217-22844236 None:intergenic 35.0%
AATAAGGGATAACACAGAAG+GGG - chr6_1:22844297-22844316 None:intergenic 35.0%
GAATAAGGGATAACACAGAA+GGG - chr6_1:22844298-22844317 None:intergenic 35.0%
AGAATAAGGGATAACACAGA+AGG - chr6_1:22844299-22844318 None:intergenic 35.0%
TGAGGAAGTTCTTAAAGAAC+TGG + chr6_1:22844362-22844381 Msa0879940:CDS 35.0%
GAGGAAGTTCTTAAAGAACT+GGG + chr6_1:22844363-22844382 Msa0879940:CDS 35.0%
AGGAAGTTCTTAAAGAACTG+GGG + chr6_1:22844364-22844383 Msa0879940:CDS 35.0%
CATCTTGCAGAAAGAATATG+GGG + chr6_1:22844526-22844545 Msa0879940:intron 35.0%
AATGTCATTAAGATAGGGGA+TGG + chr6_1:22844612-22844631 Msa0879940:intron 35.0%
GACGAACAACATTCTCAAAT+AGG - chr6_1:22844741-22844760 None:intergenic 35.0%
CGACTTGAGAATTTAGTTAG+AGG + chr6_1:22844790-22844809 Msa0879940:CDS 35.0%
AGAGAAAATCAAACTACCTG+GGG - chr6_1:22844850-22844869 None:intergenic 35.0%
AATCATATGCCAATGTTTGG+AGG + chr6_1:22845093-22845112 Msa0879940:intron 35.0%
TGCAAGCTTCAAGAAATTGA+GGG - chr6_1:22845160-22845179 None:intergenic 35.0%
! TCGGGTGCAGATATAATTTT+AGG + chr6_1:22845429-22845448 Msa0879940:intron 35.0%
!! TAGGTATTTTGCCATTTGCA+AGG + chr6_1:22845448-22845467 Msa0879940:CDS 35.0%
!! AGGTATTTTGCCATTTGCAA+GGG + chr6_1:22845449-22845468 Msa0879940:CDS 35.0%
!!! GCAATTTTGTGTTTTAGCAG+TGG + chr6_1:22845683-22845702 Msa0879940:intron 35.0%
!!! ATTTTGTGTTTTAGCAGTGG+GGG + chr6_1:22845686-22845705 Msa0879940:intron 35.0%
ACAATAGATCAATGTGTTGC+AGG + chr6_1:22845749-22845768 Msa0879940:intron 35.0%
! TCATGTTGATTGCCAGTTAA+AGG + chr6_1:22846070-22846089 Msa0879940:intron 35.0%
AGGTAAATCATTTCCAGAGT+TGG - chr6_1:22846144-22846163 None:intergenic 35.0%
AGTCAACTATTTGACAGCAT+CGG - chr6_1:22846235-22846254 None:intergenic 35.0%
GCAGGTTATTGATCTTACAA+AGG + chr6_1:22846275-22846294 Msa0879940:intron 35.0%
AAGATCTACATCACTGGTAA+GGG - chr6_1:22846319-22846338 None:intergenic 35.0%
AATGACAAGATCTACATCAC+TGG - chr6_1:22846325-22846344 None:intergenic 35.0%
!!! TCTTGTCATTTTAGAAGGGA+TGG + chr6_1:22846335-22846354 Msa0879940:CDS 35.0%
CTTTGTAGAAAGGGGAAAAA+AGG - chr6_1:22846434-22846453 None:intergenic 35.0%
! ACTTCTGAGAGAGAAATATG+TGG + chr6_1:22846554-22846573 Msa0879940:intron 35.0%
AAGAAACTAGAAAGGAACAG+AGG + chr6_1:22846677-22846696 Msa0879940:intron 35.0%
AGAAACTAGAAAGGAACAGA+GGG + chr6_1:22846678-22846697 Msa0879940:intron 35.0%
CGATTCTATGAAGATTGCAA+TGG + chr6_1:22846898-22846917 Msa0879940:CDS 35.0%
TTGCAGAATTTCTTGAGTCA+CGG + chr6_1:22847033-22847052 Msa0879940:CDS 35.0%
TTCTGCCTTGTAAAAGAATC+AGG - chr6_1:22847109-22847128 None:intergenic 35.0%
GAGGGATCAAAAACCTTAAT+TGG - chr6_1:22847370-22847389 None:intergenic 35.0%
CGTGTCACATCATCAAATTT+CGG + chr6_1:22847675-22847694 Msa0879940:intron 35.0%
! CTATAAGTAGAGTCCTTTTC+AGG - chr6_1:22847969-22847988 None:intergenic 35.0%
GCTGTCAAAATTAACTTACC+AGG + chr6_1:22848036-22848055 Msa0879940:intron 35.0%
CATCACTAGAGATACATCAT+GGG - chr6_1:22848151-22848170 None:intergenic 35.0%
ACATCACTAGAGATACATCA+TGG - chr6_1:22848152-22848171 None:intergenic 35.0%
GTATTCAAACCAACTCTTGA+TGG - chr6_1:22848974-22848993 None:intergenic 35.0%
AAAGATGAGACAAAGTGTGT+GGG - chr6_1:22849074-22849093 None:intergenic 35.0%
! CTTTGTCTCATCTTTGTTGT+TGG + chr6_1:22849079-22849098 Msa0879940:intron 35.0%
! TTCAAAGAGCACAACTTCTT+TGG + chr6_1:22849125-22849144 Msa0879940:intron 35.0%
ATGGCATTCATTAGGTTCTT+GGG - chr6_1:22849165-22849184 None:intergenic 35.0%
TCTTCTTCATGGCATTCATT+AGG - chr6_1:22849173-22849192 None:intergenic 35.0%
TCTAATGCATTATGCATGTG+GGG - chr6_1:22849218-22849237 None:intergenic 35.0%
GGTCTATCTATAGACTATAG+AGG - chr6_1:22849267-22849286 None:intergenic 35.0%
TGTAGTTCACTTGGAAAAGA+CGG - chr6_1:22849359-22849378 None:intergenic 35.0%
! TAGTTTCTCAATGTTGATGG+AGG - chr6_1:22849384-22849403 None:intergenic 35.0%
GCACAAACACTCTTTGAATT+AGG + chr6_1:22849490-22849509 Msa0879940:intron 35.0%
!! GTAATTATATGTGTCGGTTG+TGG - chr6_1:22849526-22849545 None:intergenic 35.0%
ATGAGGGAATATAACTCCAA+TGG - chr6_1:22849703-22849722 None:intergenic 35.0%
! GATGATGATGATGATGATGA+GGG - chr6_1:22849719-22849738 None:intergenic 35.0%
! TGATGATGATGATGATGATG+AGG - chr6_1:22849720-22849739 None:intergenic 35.0%
TAGTGTTTGGGAATGATGAT+TGG - chr6_1:22849834-22849853 None:intergenic 35.0%
AATCATCATTCCCAAACACT+AGG + chr6_1:22849833-22849852 Msa0879940:CDS 35.0%
ATAAGGGATACCTAGTGTTT+GGG - chr6_1:22849846-22849865 None:intergenic 35.0%
TATAAGGGATACCTAGTGTT+TGG - chr6_1:22849847-22849866 None:intergenic 35.0%
!! GACGATGATGATGTGTTTTA+TGG + chr6_1:22850014-22850033 Msa0879940:intron 35.0%
! GAAGGATGATGATGAAGAAA+AGG + chr6_1:22850128-22850147 Msa0879940:intron 35.0%
! ATTTTGCATGATTGAAGGGT+TGG + chr6_1:22850192-22850211 Msa0879940:intron 35.0%
! TGGTCCACCTTAAACATTTT+AGG + chr6_1:22850272-22850291 Msa0879940:intron 35.0%
ACATATTTGAGCGACCAAAA+CGG + chr6_1:22850332-22850351 Msa0879940:intron 35.0%
AACTAGGCTTAATTGGCATT+TGG - chr6_1:22850409-22850428 None:intergenic 35.0%
! ATGGTACTAACTAGCTTGAT+TGG - chr6_1:22850444-22850463 None:intergenic 35.0%
GTAGTGTGCTGAGTATTAAT+TGG + chr6_1:22850613-22850632 Msa0879940:intron 35.0%
TGTGCTGAGTATTAATTGGA+GGG + chr6_1:22850617-22850636 Msa0879940:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr6_1:22850699-22850718 Msa0879940:intron 35.0%
TGCATGAGTGAATTACATTG+TGG + chr6_1:22851286-22851305 Msa0879940:intron 35.0%
CAGTATCATCCATCAACAAA+GGG - chr6_1:22851380-22851399 None:intergenic 35.0%
TCAGTATCATCCATCAACAA+AGG - chr6_1:22851381-22851400 None:intergenic 35.0%
AATGGTGCATGCTGAATAAT+TGG - chr6_1:22851409-22851428 None:intergenic 35.0%
! TGGATTAATCTCTTTTGCAG+TGG + chr6_1:22851483-22851502 Msa0879940:CDS 35.0%
AAGCCGAAATTTATGCTCAA+AGG + chr6_1:22851671-22851690 Msa0879940:CDS 35.0%
ATTTATGCTCAAAGGTTAGG+TGG + chr6_1:22851679-22851698 Msa0879940:intron 35.0%
GAACATACAAGGATATCAAG+AGG - chr6_1:22844206-22844225 None:intergenic 35.0%
GTTCAGGTAAAGAACATACA+AGG - chr6_1:22851907-22851926 None:intergenic 35.0%
! CACTTTTGCATATGAAGTTC+AGG - chr6_1:22851923-22851942 None:intergenic 35.0%
AGGAACTCCTTAAAGAACTA+GGG + chr6_1:22852055-22852074 Msa0879940:CDS 35.0%
! CTCTAAACCCTAGTTCTTTA+AGG - chr6_1:22852065-22852084 None:intergenic 35.0%
AGATATCTTCGAGAAAGTCA+AGG + chr6_1:22852083-22852102 Msa0879940:CDS 35.0%
AATGCTATTCCGCTAAAATG+TGG + chr6_1:22852142-22852161 Msa0879940:intron 35.0%
! ACCATTCTTCCACATTTTAG+CGG - chr6_1:22852154-22852173 None:intergenic 35.0%
ACAGAATGAAGAGAATGCAA+AGG + chr6_1:22852387-22852406 Msa0879940:intron 35.0%
AACTTTCTCAAATAGGGAGA+TGG - chr6_1:22852413-22852432 None:intergenic 35.0%
GACGAACAACTTTCTCAAAT+AGG - chr6_1:22852420-22852439 None:intergenic 35.0%
CGACTTGAGAATTTAGTTAG+AGG + chr6_1:22844790-22844809 Msa0879940:CDS 35.0%
! TAGTTAGAGGAATTTTTGCG+GGG + chr6_1:22852482-22852501 Msa0879940:CDS 35.0%
TTTGTTCACTTCTCGTGTTA+TGG + chr6_1:22852556-22852575 Msa0879940:intron 35.0%
TGCAAGCTTCAACAAATTGA+GGG - chr6_1:22852815-22852834 None:intergenic 35.0%
!! AGCTCATTTTCAAAGTGTCA+AGG - chr6_1:22852918-22852937 None:intergenic 35.0%
! TTGACACTTTGAAAATGAGC+TGG + chr6_1:22852917-22852936 Msa0879940:intron 35.0%
ATTGATTATGGCACTACTCT+TGG - chr6_1:22853012-22853031 None:intergenic 35.0%
! TTTCGAATTGCTTTGAATGC+AGG + chr6_1:22853232-22853251 Msa0879940:intron 35.0%
!! GCTTTGAATGCAGGTTATTT+TGG + chr6_1:22853241-22853260 Msa0879940:intron 35.0%
ACAGAGTTAGGAAAGAACTT+CGG - chr6_1:22853368-22853387 None:intergenic 35.0%
!! TCAAGTTGGTTTCCAGTTAA+AGG + chr6_1:22853387-22853406 Msa0879940:intron 35.0%
TTCCAGTTAAAGGATGAAGA+AGG + chr6_1:22853397-22853416 Msa0879940:intron 35.0%
AGTCAATGATTTGACAGTAC+AGG - chr6_1:22853551-22853570 None:intergenic 35.0%
AATGACAAGATCTACATCAC+TGG - chr6_1:22846325-22846344 None:intergenic 35.0%
ATTGGAGTCTTACATTACTC+AGG - chr6_1:22853882-22853901 None:intergenic 35.0%
AAACACGGTATCAAATCCAA+AGG - chr6_1:22853964-22853983 None:intergenic 35.0%
GGATTTGATACCGTGTTTAA+TGG + chr6_1:22853966-22853985 Msa0879940:intron 35.0%
TTGAATCTCATCCCATAAGT+TGG + chr6_1:22853991-22854010 Msa0879940:intron 35.0%
!! CGACAACTAAAAAGGTATCA+AGG + chr6_1:22854383-22854402 Msa0879940:intron 35.0%
CTATTGTTCGGATTGAGATT+CGG + chr6_1:22854440-22854459 Msa0879940:intron 35.0%
ACTTTCCCACCTTAAAATCA+CGG + chr6_1:22854570-22854589 Msa0879940:intron 35.0%
!!! AAATCCCGTGATTTTAAGGT+GGG - chr6_1:22854578-22854597 None:intergenic 35.0%
! ATCGAAATCCCGTGATTTTA+AGG - chr6_1:22854582-22854601 None:intergenic 35.0%
CTTTAGTTAATCCTCCAATG+AGG + chr6_1:22854625-22854644 Msa0879940:intron 35.0%
TTCACTAGGAAAAACTGACT+AGG - chr6_1:22854678-22854697 None:intergenic 35.0%
GTCAGCGTTTAAATTTCACT+AGG - chr6_1:22854692-22854711 None:intergenic 35.0%
GCTGACACATTTATTATGAC+AGG + chr6_1:22854706-22854725 Msa0879940:intron 35.0%
!! GAACGGGTTTTGCATATTTT+AGG - chr6_1:22855059-22855078 None:intergenic 35.0%
TAAAGAACACGCCAATTATC+AGG - chr6_1:22855114-22855133 None:intergenic 35.0%
TATCACCAACACAAACTCAC+AGG + chr6_1:22842856-22842875 Msa0879940:CDS 40.0%
TTACTCTTTCAACAACCTGC+AGG + chr6_1:22842943-22842962 Msa0879940:CDS 40.0%
TACTCTTTCAACAACCTGCA+GGG + chr6_1:22842944-22842963 Msa0879940:CDS 40.0%
CTGAACTGAGTTATGCTCAA+GGG - chr6_1:22843143-22843162 None:intergenic 40.0%
CTTGAGCATAACTCAGTTCA+GGG + chr6_1:22843142-22843161 Msa0879940:intron 40.0%
GTGTTTGAACTTTGGATTCC+CGG + chr6_1:22843185-22843204 Msa0879940:intron 40.0%
ACCACTTGAGGTTAATAAGC+CGG - chr6_1:22843207-22843226 None:intergenic 40.0%
TGCTAGAAATTCACCACTTG+AGG - chr6_1:22843219-22843238 None:intergenic 40.0%
!! AGTGGTGAATTTCTAGCACT+AGG + chr6_1:22843221-22843240 Msa0879940:intron 40.0%
! CTTGTTTGCAGCCTTTTCTT+AGG + chr6_1:22843550-22843569 Msa0879940:intron 40.0%
GGTGAGATTCCCTTTATTGA+TGG + chr6_1:22843660-22843679 Msa0879940:CDS 40.0%
AATGGTGCATGCTGAGTATT+TGG - chr6_1:22843701-22843720 None:intergenic 40.0%
TGGATAAATCTCCTAGACAG+TGG + chr6_1:22843775-22843794 Msa0879940:CDS 40.0%
TGAGATCATACTTGTAGGAG+GGG - chr6_1:22843804-22843823 None:intergenic 40.0%
GTGAGATCATACTTGTAGGA+GGG - chr6_1:22843805-22843824 None:intergenic 40.0%
TGTGAGATCATACTTGTAGG+AGG - chr6_1:22843806-22843825 None:intergenic 40.0%
!! TCAGCTTTATTTGCAGCATC+AGG - chr6_1:22843941-22843960 None:intergenic 40.0%
! CCCTTTTCGTTTACTTTGAG+AGG + chr6_1:22844005-22844024 Msa0879940:intron 40.0%
GCCTGATGTTTATGAGAAAC+AGG - chr6_1:22844050-22844069 None:intergenic 40.0%
AAGAAAGATCCTGCAAGTCA+TGG + chr6_1:22844176-22844195 Msa0879940:CDS 40.0%
! TTTGTTCACTTCTGGTGTTG+TGG + chr6_1:22844877-22844896 Msa0879940:intron 40.0%
GCAAGCTTCAAGAAATTGAG+GGG - chr6_1:22845159-22845178 None:intergenic 40.0%
CTGCAAGCTTCAAGAAATTG+AGG - chr6_1:22845161-22845180 None:intergenic 40.0%
!!! TAGGGATGGAATGTCGTTTT+CGG + chr6_1:22845191-22845210 Msa0879940:CDS 40.0%
TCAAGGTCATCGATAATCCA+TGG - chr6_1:22845243-22845262 None:intergenic 40.0%
GAGTAAGAAGTCGTGGAAAA+AGG + chr6_1:22845281-22845300 Msa0879940:intron 40.0%
GGAAAAAGGCAAGTGTCATA+TGG + chr6_1:22845295-22845314 Msa0879940:intron 40.0%
GTGTCTATATTTGTGGACAG+AGG + chr6_1:22845592-22845611 Msa0879940:intron 40.0%
GCAATCAACATGACAGAGTT+AGG - chr6_1:22846063-22846082 None:intergenic 40.0%
TGCCAGTTAAAGGATGAAGA+AGG + chr6_1:22846080-22846099 Msa0879940:intron 40.0%
GTCCTTCTTCATCCTTTAAC+TGG - chr6_1:22846085-22846104 None:intergenic 40.0%
CAAGATCTACATCACTGGTA+AGG - chr6_1:22846320-22846339 None:intergenic 40.0%
AAGTGACAGAAAGGAACGAA+AGG - chr6_1:22846484-22846503 None:intergenic 40.0%
AACAGAGGGAGTAGTTGATT+GGG + chr6_1:22846692-22846711 Msa0879940:intron 40.0%
ACTGACACATCTCTTATGAC+AGG + chr6_1:22846835-22846854 Msa0879940:intron 40.0%
CTGACACATCTCTTATGACA+GGG + chr6_1:22846836-22846855 Msa0879940:intron 40.0%
TGACACATCTCTTATGACAG+GGG + chr6_1:22846837-22846856 Msa0879940:intron 40.0%
TCAAGAAATTCTGCAACCTC+AGG - chr6_1:22847029-22847048 None:intergenic 40.0%
TCTCGGATTTATAGTCTGGA+GGG - chr6_1:22847388-22847407 None:intergenic 40.0%
ATCTCGGATTTATAGTCTGG+AGG - chr6_1:22847389-22847408 None:intergenic 40.0%
GGGTGAGTGGTATGATAATT+TGG - chr6_1:22847642-22847661 None:intergenic 40.0%
TGACACGTGATATGATGATC+GGG - chr6_1:22847662-22847681 None:intergenic 40.0%
GTGACACGTGATATGATGAT+CGG - chr6_1:22847663-22847682 None:intergenic 40.0%
! AACAGCTTGTTCAAGACTCT+AGG + chr6_1:22847910-22847929 Msa0879940:intron 40.0%
CAGAGATCCTTTACCTGAAA+AGG + chr6_1:22847953-22847972 Msa0879940:intron 40.0%
!!! GTAGAGTCCTTTTCAGGTAA+AGG - chr6_1:22847963-22847982 None:intergenic 40.0%
! ACAGCATCAGTAAAAGCATG+AGG - chr6_1:22848021-22848040 None:intergenic 40.0%
AACTTACCAGGACAGAATTG+TGG + chr6_1:22848048-22848067 Msa0879940:intron 40.0%
ATGGGAACAAAACAAACACG+TGG - chr6_1:22848133-22848152 None:intergenic 40.0%
GACTATAGTGACAGTGATGA+TGG - chr6_1:22848482-22848501 None:intergenic 40.0%
ATATGAGACCCATCAAGAGT+TGG + chr6_1:22848962-22848981 Msa0879940:intron 40.0%
TTGACATCCATACAAAGCTG+TGG - chr6_1:22849006-22849025 None:intergenic 40.0%
CAAAGATGAGACAAAGTGTG+TGG - chr6_1:22849075-22849094 None:intergenic 40.0%
CATGGCATTCATTAGGTTCT+TGG - chr6_1:22849166-22849185 None:intergenic 40.0%
!! TAGACCTAACTTCTAAGGTC+AGG + chr6_1:22849281-22849300 Msa0879940:intron 40.0%
ATGGAGGTTTGTAGTTCACT+TGG - chr6_1:22849368-22849387 None:intergenic 40.0%
CTGGATATGGACACAAACAT+CGG - chr6_1:22849611-22849630 None:intergenic 40.0%
CAGCATCTATGAGTTTGAGT+TGG - chr6_1:22849677-22849696 None:intergenic 40.0%
TTACTCTTTCAACAACCTGC+AGG + chr6_1:22842943-22842962 Msa0879940:CDS 40.0%
TACTCTTTCAACAACCTGCA+GGG + chr6_1:22842944-22842963 Msa0879940:CDS 40.0%
! AGTGTTGTTGTTCTTGATGC+TGG + chr6_1:22849939-22849958 Msa0879940:intron 40.0%
! ACGGAGGGAGTATATCTATA+TGG - chr6_1:22850463-22850482 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr6_1:22850703-22850722 None:intergenic 40.0%
GTGTGCTGAGTATTAATTGG+AGG + chr6_1:22850616-22850635 Msa0879940:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr6_1:22850703-22850722 Msa0879940:intron 40.0%
! GGACTTTTGGATCATCAGAA+GGG - chr6_1:22851443-22851462 None:intergenic 40.0%
AGAGAACATACTTGTAGGAG+GGG - chr6_1:22851512-22851531 None:intergenic 40.0%
GAGAGAACATACTTGTAGGA+GGG - chr6_1:22851513-22851532 None:intergenic 40.0%
TGAGAGAACATACTTGTAGG+AGG - chr6_1:22851514-22851533 None:intergenic 40.0%
CAAAACAAAATTGGGGCATG+TGG + chr6_1:22851532-22851551 Msa0879940:intron 40.0%
AAGAAAGATCCTGCAAGTCA+TGG + chr6_1:22844176-22844195 Msa0879940:CDS 40.0%
GAGGAACTCCTTAAAGAACT+AGG + chr6_1:22852054-22852073 Msa0879940:CDS 40.0%
TCCGCTAAAATGTGGAAGAA+TGG + chr6_1:22852150-22852169 Msa0879940:intron 40.0%
CATCTTACAGCAAGAATAGG+TGG + chr6_1:22852211-22852230 Msa0879940:intron 40.0%
CATTAAGATAGGAGATGGAG+TGG + chr6_1:22852307-22852326 Msa0879940:intron 40.0%
CTGCAAGCTTCAACAAATTG+AGG - chr6_1:22852816-22852835 None:intergenic 40.0%
TCAAGGTCATCGATAATCCA+TGG - chr6_1:22845243-22845262 None:intergenic 40.0%
!! TAGGTGTTTTGCCATTTGCA+AGG + chr6_1:22853088-22853107 Msa0879940:CDS 40.0%
!! AGGTGTTTTGCCATTTGCAA+GGG + chr6_1:22853089-22853108 Msa0879940:CDS 40.0%
CTTTCCTAACTCTGTCAAGT+TGG + chr6_1:22853373-22853392 Msa0879940:intron 40.0%
GAAACCAACTTGACAGAGTT+AGG - chr6_1:22853380-22853399 None:intergenic 40.0%
GTCCTTCTTCATCCTTTAAC+TGG - chr6_1:22846085-22846104 None:intergenic 40.0%
!! TGTTTTGTTCCTTGGATTGC+AGG + chr6_1:22853605-22853624 Msa0879940:intron 40.0%
GCAGGCTATTGATCTTACAT+AGG + chr6_1:22853623-22853642 Msa0879940:intron 40.0%
TGAGCGTGTTAAAAGGATGA+AGG + chr6_1:22853814-22853833 Msa0879940:intron 40.0%
AATCAACCTCACGTCTATCA+TGG + chr6_1:22853910-22853929 Msa0879940:intron 40.0%
GTTGTATTGGAGTCTCACAT+TGG - chr6_1:22854073-22854092 None:intergenic 40.0%
ACTGCTGAGAGAGAAATATG+TGG + chr6_1:22854258-22854277 Msa0879940:intron 40.0%
!! GAGATTCGGTGATTATAAGG+TGG + chr6_1:22854454-22854473 Msa0879940:intron 40.0%
CTTTCCCACCTTAAAATCAC+GGG + chr6_1:22854571-22854590 Msa0879940:intron 40.0%
!! GAAATCCCGTGATTTTAAGG+TGG - chr6_1:22854579-22854598 None:intergenic 40.0%
TGTACTAGTATAGGCCTCAT+TGG - chr6_1:22854642-22854661 None:intergenic 40.0%
GCGCATAACTGTACTAGTAT+AGG - chr6_1:22854651-22854670 None:intergenic 40.0%
CATTTATTATGACAGGGTCG+TGG + chr6_1:22854713-22854732 Msa0879940:intron 40.0%
AGAGCAAAATCGCAAATCGT+AGG - chr6_1:22855007-22855026 None:intergenic 40.0%
ACTCAGGATTGAGATCAGTA+AGG - chr6_1:22855031-22855050 None:intergenic 40.0%
CCTGAACTGAGTTATGCTCA+AGG - chr6_1:22843144-22843163 None:intergenic 45.0%
CCTTGAGCATAACTCAGTTC+AGG + chr6_1:22843141-22843160 Msa0879940:intron 45.0%
TCAGGGACATTGTGATATGC+AGG + chr6_1:22843159-22843178 Msa0879940:intron 45.0%
GGACATTGTGATATGCAGGT+CGG + chr6_1:22843163-22843182 Msa0879940:intron 45.0%
CCACTTGAGGTTAATAAGCC+GGG - chr6_1:22843206-22843225 None:intergenic 45.0%
GGCAAGTAGTAGATCACAGT+TGG + chr6_1:22843639-22843658 Msa0879940:CDS 45.0%
CTACACGTGGATCATCAGAA+GGG - chr6_1:22843735-22843754 None:intergenic 45.0%
ACTACACGTGGATCATCAGA+AGG - chr6_1:22843736-22843755 None:intergenic 45.0%
GCTTGCACTGTCTTTATCCT+AGG + chr6_1:22844068-22844087 Msa0879940:intron 45.0%
GCTTCTATGTAGACTTCGTG+AGG + chr6_1:22844344-22844363 Msa0879940:intron 45.0%
CATTAAGATAGGGGATGGAG+TGG + chr6_1:22844617-22844636 Msa0879940:intron 45.0%
ACAGGCTGAAGAGAATGCAA+AGG + chr6_1:22844708-22844727 Msa0879940:intron 45.0%
GCAGGGAACGTATTTGATCT+TGG + chr6_1:22844820-22844839 Msa0879940:CDS 45.0%
! ATTTGATCTTGGTTCTCCCC+AGG + chr6_1:22844831-22844850 Msa0879940:CDS 45.0%
CTCACAAACCGAGAAAGAGA+TGG + chr6_1:22844945-22844964 Msa0879940:intron 45.0%
AGCTTGCAGAAGCTTTCTCT+AGG + chr6_1:22845172-22845191 Msa0879940:intron 45.0%
GCTTGCAGAAGCTTTCTCTA+GGG + chr6_1:22845173-22845192 Msa0879940:intron 45.0%
AAAATCTTCTCCCTCGACCA+TGG + chr6_1:22845223-22845242 Msa0879940:CDS 45.0%
CATCGATAATCCATGGTCGA+GGG - chr6_1:22845236-22845255 None:intergenic 45.0%
TCATCGATAATCCATGGTCG+AGG - chr6_1:22845237-22845256 None:intergenic 45.0%
TCAGATGGAGTAAGAAGTCG+TGG + chr6_1:22845274-22845293 Msa0879940:intron 45.0%
CACGTGCAAAACACGTCATA+TGG - chr6_1:22845664-22845683 None:intergenic 45.0%
AATGTGTTGCAGGCAATACC+TGG + chr6_1:22845759-22845778 Msa0879940:intron 45.0%
! TCTCGAATTGCTTTGAGTGC+AGG + chr6_1:22845915-22845934 Msa0879940:intron 45.0%
!! GCTTTGAGTGCAGGTTGTTT+TGG + chr6_1:22845924-22845943 Msa0879940:intron 45.0%
GATGAAGAAGGACGTCTCTT+GGG + chr6_1:22846092-22846111 Msa0879940:CDS 45.0%
GAACAGAGGGAGTAGTTGAT+TGG + chr6_1:22846691-22846710 Msa0879940:intron 45.0%
CTTACAGGTGAAACATCCTG+AGG + chr6_1:22847010-22847029 Msa0879940:intron 45.0%
TGATATGATGATCGGGTGAG+TGG - chr6_1:22847655-22847674 None:intergenic 45.0%
AGACAACCACAATTCTGTCC+TGG - chr6_1:22848057-22848076 None:intergenic 45.0%
!! ACTAACACATTCGGTGCATG+AGG - chr6_1:22848829-22848848 None:intergenic 45.0%
! TCTTGATGGGTCTCATATGC+TGG - chr6_1:22848960-22848979 None:intergenic 45.0%
CATCCATACAAAGCTGTGGT+GGG - chr6_1:22849002-22849021 None:intergenic 45.0%
ACATCCATACAAAGCTGTGG+TGG - chr6_1:22849003-22849022 None:intergenic 45.0%
CGTTGATATTGAGCTCGCAT+CGG + chr6_1:22849035-22849054 Msa0879940:intron 45.0%
! GCACAACTTCTTTGGCTTCA+AGG + chr6_1:22849133-22849152 Msa0879940:intron 45.0%
TGCATTATGCATGTGGGGTT+GGG - chr6_1:22849213-22849232 None:intergenic 45.0%
ATGCATTATGCATGTGGGGT+TGG - chr6_1:22849214-22849233 None:intergenic 45.0%
TGTGCCTGACCTTAGAAGTT+AGG - chr6_1:22849288-22849307 None:intergenic 45.0%
CACAAACATCGGACATGACA+CGG - chr6_1:22849600-22849619 None:intergenic 45.0%
GTTGTTCTTGATGCTGGTGA+AGG + chr6_1:22849945-22849964 Msa0879940:intron 45.0%
AGGTGGACCAACATTGTATG+TGG - chr6_1:22850262-22850281 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr6_1:22850702-22850721 None:intergenic 45.0%
! GGAGGGTACAATTGAAGCAT+TGG + chr6_1:22850634-22850653 Msa0879940:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr6_1:22850702-22850721 Msa0879940:intron 45.0%
GGCAATTAGTACACCACAGT+TGG + chr6_1:22851347-22851366 Msa0879940:CDS 45.0%
AAAGGGAATCTCACCAACTG+TGG - chr6_1:22843655-22843674 None:intergenic 45.0%
GGTGAGATTCCCTTTGTTGA+TGG + chr6_1:22851368-22851387 Msa0879940:CDS 45.0%
ATTCAGCATGCACCATTCCT+TGG + chr6_1:22851412-22851431 Msa0879940:CDS 45.0%
! GGGACTTTTGGATCATCAGA+AGG - chr6_1:22851444-22851463 None:intergenic 45.0%
AAGATAACTCAGTGGGAGTG+GGG - chr6_1:22851464-22851483 None:intergenic 45.0%
CAAGATAACTCAGTGGGAGT+GGG - chr6_1:22851465-22851484 None:intergenic 45.0%
!! TCGGCTTTATTTGCAGCATC+AGG - chr6_1:22851658-22851677 None:intergenic 45.0%
! AGAGGATTTCCATGACTTGC+AGG - chr6_1:22851878-22851897 None:intergenic 45.0%
! ATTTGATCTTGGTTCTCCCC+AGG + chr6_1:22844831-22844850 Msa0879940:CDS 45.0%
AGCTTGCAGAAGCTTTCTCT+AGG + chr6_1:22845172-22845191 Msa0879940:intron 45.0%
GCTTGCAGAAGCTTTCTCTA+GGG + chr6_1:22845173-22845192 Msa0879940:intron 45.0%
!! CAGAAGCTTTCTCTAGGGTT+GGG + chr6_1:22852833-22852852 Msa0879940:intron 45.0%
!! AGAAGCTTTCTCTAGGGTTG+GGG + chr6_1:22852834-22852853 Msa0879940:intron 45.0%
AAAATCTCCAACCTCGACCA+TGG + chr6_1:22852881-22852900 Msa0879940:intron 45.0%
TCATCGATAATCCATGGTCG+AGG - chr6_1:22845237-22845256 None:intergenic 45.0%
TATGACACTTGCCTTCTTCC+AGG - chr6_1:22852953-22852972 None:intergenic 45.0%
GGAAGAAGGCAAGTGTCATA+TGG + chr6_1:22852953-22852972 Msa0879940:intron 45.0%
GATGAAGAAGGACGTCTCTT+GGG + chr6_1:22846092-22846111 Msa0879940:CDS 45.0%
GATCAATAGCCTGCAATCCA+AGG - chr6_1:22853617-22853636 None:intergenic 45.0%
CAAGATCTACATCACTGGCA+AGG - chr6_1:22853668-22853687 None:intergenic 45.0%
TACTCAGGTTCCCAAATCGT+TGG - chr6_1:22853867-22853886 None:intergenic 45.0%
TAGGATCCATGATAGACGTG+AGG - chr6_1:22853919-22853938 None:intergenic 45.0%
ATTGGAGTCTCACATTGGTC+AGG - chr6_1:22854068-22854087 None:intergenic 45.0%
ACTAGTATAGGCCTCATTGG+AGG - chr6_1:22854639-22854658 None:intergenic 45.0%
!!! ACTATTATATTTTAAATTTA+GGG - chr6_1:22848520-22848539 None:intergenic 5.0%
!!! AACTATTATATTTTAAATTT+AGG - chr6_1:22848521-22848540 None:intergenic 5.0%
!!! ATTTAAAATAGTTAAATAAT+AGG + chr6_1:22848560-22848579 Msa0879940:intron 5.0%
CAGCACCTGTGAGTTTGTGT+TGG - chr6_1:22842864-22842883 None:intergenic 50.0%
CAACACAAACTCACAGGTGC+TGG + chr6_1:22842862-22842881 Msa0879940:CDS 50.0%
GAACAGAGAGTTAACCCTGC+AGG - chr6_1:22842961-22842980 None:intergenic 50.0%
! GCAGGTCGGTGTTTGAACTT+TGG + chr6_1:22843177-22843196 Msa0879940:intron 50.0%
CCCGGCTTATTAACCTCAAG+TGG + chr6_1:22843203-22843222 Msa0879940:intron 50.0%
ACTCAGCATGCACCATTCCT+TGG + chr6_1:22843704-22843723 Msa0879940:CDS 50.0%
AGAAGGGAACCTCCAAGGAA+TGG - chr6_1:22843719-22843738 None:intergenic 50.0%
TCATCAGAAGGGAACCTCCA+AGG - chr6_1:22843724-22843743 None:intergenic 50.0%
TCACTCCCACCGAGTTATCT+TGG + chr6_1:22843755-22843774 Msa0879940:CDS 50.0%
! GCAGAAGCTTTCTCTAGGGA+TGG + chr6_1:22845177-22845196 Msa0879940:CDS 50.0%
CATTTGCAAGGGAGCTCCTT+CGG + chr6_1:22845460-22845479 Msa0879940:CDS 50.0%
!!! TGTGTTTTAGCAGTGGGGGA+AGG + chr6_1:22845690-22845709 Msa0879940:intron 50.0%
GGGAAGGATGAGGTGGATAA+TGG + chr6_1:22845706-22845725 Msa0879940:intron 50.0%
GGATGAAGAAGGACGTCTCT+TGG + chr6_1:22846091-22846110 Msa0879940:CDS 50.0%
! CCGCTAGGCTTTGTAGAAAG+GGG - chr6_1:22846442-22846461 None:intergenic 50.0%
CCCCTTTCTACAAAGCCTAG+CGG + chr6_1:22846439-22846458 Msa0879940:intron 50.0%
! GCCGCTAGGCTTTGTAGAAA+GGG - chr6_1:22846443-22846462 None:intergenic 50.0%
GTTGTGTGAATTTCGCCGCT+AGG - chr6_1:22846457-22846476 None:intergenic 50.0%
! ACACCCACCACAGCTTTGTA+TGG + chr6_1:22848996-22849015 Msa0879940:intron 50.0%
CTCATAGATGCTGCAGCCAT+TGG + chr6_1:22849684-22849703 Msa0879940:intron 50.0%
GGATAGAGAGTTAACCCTGC+AGG - chr6_1:22849780-22849799 None:intergenic 50.0%
GGTCGGACCACATACAATGT+TGG + chr6_1:22850252-22850271 Msa0879940:intron 50.0%
CCAAGATAACTCAGTGGGAG+TGG - chr6_1:22851466-22851485 None:intergenic 50.0%
CCACTCCCACTGAGTTATCT+TGG + chr6_1:22851463-22851482 Msa0879940:CDS 50.0%
GCTTCTATGCAGACTTTGCG+AGG + chr6_1:22852035-22852054 Msa0879940:intron 50.0%
GCGGGGAACGTATTTGATCT+TGG + chr6_1:22852499-22852518 Msa0879940:CDS 50.0%
!! GCAGAAGCTTTCTCTAGGGT+TGG + chr6_1:22852832-22852851 Msa0879940:intron 50.0%
!! GAAGCTTTCTCTAGGGTTGG+GGG + chr6_1:22852835-22852854 Msa0879940:intron 50.0%
CGATAATCCATGGTCGAGGT+TGG - chr6_1:22852891-22852910 None:intergenic 50.0%
GAGCAAGAAGTCCTGGAAGA+AGG + chr6_1:22852939-22852958 Msa0879940:intron 50.0%
CATTTGCAAGGGAGCTCCTT+CGG + chr6_1:22845460-22845479 Msa0879940:CDS 50.0%
GGATGAAGAAGGACGTCTCT+TGG + chr6_1:22846091-22846110 Msa0879940:CDS 50.0%
GGTGTGTGAACTTCGTTGCT+AGG - chr6_1:22854111-22854130 None:intergenic 50.0%
CAGCATGCACCATTCCTTGG+AGG + chr6_1:22843707-22843726 Msa0879940:CDS 55.0%
AGGAGGGGATACCACTGTCT+AGG - chr6_1:22843789-22843808 None:intergenic 55.0%
! AGAGGATCGCCATGACTTGC+AGG - chr6_1:22844188-22844207 None:intergenic 55.0%
CGAAGGAGCTCCCTTGCAAA+TGG - chr6_1:22845462-22845481 None:intergenic 55.0%
TTAGCAGTGGGGGAAGGATG+AGG + chr6_1:22845696-22845715 Msa0879940:intron 55.0%
! CGCCGCTAGGCTTTGTAGAA+AGG - chr6_1:22846444-22846463 None:intergenic 55.0%
CATCTCTTATGACAGGGGCG+CGG + chr6_1:22846842-22846861 Msa0879940:intron 55.0%
CAGCATGCACCATTCCTTGG+AGG + chr6_1:22843707-22843726 Msa0879940:CDS 55.0%
AGAAGGGAGCCTCCAAGGAA+TGG - chr6_1:22851427-22851446 None:intergenic 55.0%
TCATCAGAAGGGAGCCTCCA+AGG - chr6_1:22851432-22851451 None:intergenic 55.0%
! TCAGTGGGAGTGGGGACTTT+TGG - chr6_1:22851456-22851475 None:intergenic 55.0%
TGAGCTGGAGCAAGAAGTCC+TGG + chr6_1:22852932-22852951 Msa0879940:intron 55.0%
CGAAGGAGCTCCCTTGCAAA+TGG - chr6_1:22845462-22845481 None:intergenic 55.0%
!! CTCACAGGTGCTGGAGCCAT+TGG + chr6_1:22842871-22842890 Msa0879940:CDS 60.0%
TCGGTGGGAGTGACTACACG+TGG - chr6_1:22843748-22843767 None:intergenic 60.0%
AAACCTGACTCCCACGCCGA+AGG - chr6_1:22845479-22845498 None:intergenic 60.0%
ATACCTGACTCCCACGCCGA+AGG - chr6_1:22853119-22853138 None:intergenic 60.0%
CAAGGGAGCTCCTTCGGCGT+GGG + chr6_1:22845466-22845485 Msa0879940:CDS 65.0%
GCAGTGGGGGAAGGATGAGG+TGG + chr6_1:22845699-22845718 Msa0879940:intron 65.0%
CAAGGGAGCTCCTTCGGCGT+GGG + chr6_1:22845466-22845485 Msa0879940:CDS 65.0%
GCAAGGGAGCTCCTTCGGCG+TGG + chr6_1:22845465-22845484 Msa0879940:CDS 70.0%
GCTCCTTCGGCGTGGGAGTC+AGG + chr6_1:22845473-22845492 Msa0879940:CDS 70.0%
GCAAGGGAGCTCCTTCGGCG+TGG + chr6_1:22845465-22845484 Msa0879940:CDS 70.0%
GCTCCTTCGGCGTGGGAGTC+AGG + chr6_1:22845473-22845492 Msa0879940:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 22842765 22855250 22842765 ID=Msa0879940;Name=Msa0879940
chr6_1 mRNA 22842765 22855250 22842765 ID=Msa0879940-mRNA-1;Parent=Msa0879940;Name=Msa0879940-mRNA-1;_AED=0.30;_eAED=0.30;_QI=63|0.83|0.84|1|0.83|0.88|25|107|814
chr6_1 exon 22842765 22843035 22842765 ID=Msa0879940-mRNA-1:exon:6297;Parent=Msa0879940-mRNA-1
chr6_1 exon 22843626 22843812 22843626 ID=Msa0879940-mRNA-1:exon:6298;Parent=Msa0879940-mRNA-1
chr6_1 exon 22843910 22843975 22843910 ID=Msa0879940-mRNA-1:exon:6299;Parent=Msa0879940-mRNA-1
chr6_1 exon 22844151 22844217 22844151 ID=Msa0879940-mRNA-1:exon:6300;Parent=Msa0879940-mRNA-1
chr6_1 exon 22844345 22844413 22844345 ID=Msa0879940-mRNA-1:exon:6301;Parent=Msa0879940-mRNA-1
chr6_1 exon 22844712 22844852 22844712 ID=Msa0879940-mRNA-1:exon:6302;Parent=Msa0879940-mRNA-1
chr6_1 exon 22845174 22845282 22845174 ID=Msa0879940-mRNA-1:exon:6303;Parent=Msa0879940-mRNA-1
chr6_1 exon 22845439 22845494 22845439 ID=Msa0879940-mRNA-1:exon:6304;Parent=Msa0879940-mRNA-1
chr6_1 exon 22845937 22846011 22845937 ID=Msa0879940-mRNA-1:exon:6305;Parent=Msa0879940-mRNA-1
chr6_1 exon 22846086 22846163 22846086 ID=Msa0879940-mRNA-1:exon:6306;Parent=Msa0879940-mRNA-1
chr6_1 exon 22846279 22846356 22846279 ID=Msa0879940-mRNA-1:exon:6307;Parent=Msa0879940-mRNA-1
chr6_1 exon 22846857 22846919 22846857 ID=Msa0879940-mRNA-1:exon:6308;Parent=Msa0879940-mRNA-1
chr6_1 exon 22847017 22847057 22847017 ID=Msa0879940-mRNA-1:exon:6309;Parent=Msa0879940-mRNA-1
chr6_1 exon 22849784 22849854 22849784 ID=Msa0879940-mRNA-1:exon:6310;Parent=Msa0879940-mRNA-1
chr6_1 exon 22851334 22851520 22851334 ID=Msa0879940-mRNA-1:exon:6311;Parent=Msa0879940-mRNA-1
chr6_1 exon 22851627 22851692 22851627 ID=Msa0879940-mRNA-1:exon:6312;Parent=Msa0879940-mRNA-1
chr6_1 exon 22851841 22851907 22851841 ID=Msa0879940-mRNA-1:exon:6313;Parent=Msa0879940-mRNA-1
chr6_1 exon 22852036 22852104 22852036 ID=Msa0879940-mRNA-1:exon:6314;Parent=Msa0879940-mRNA-1
chr6_1 exon 22852391 22852531 22852391 ID=Msa0879940-mRNA-1:exon:6315;Parent=Msa0879940-mRNA-1
chr6_1 exon 22853048 22853134 22853048 ID=Msa0879940-mRNA-1:exon:6316;Parent=Msa0879940-mRNA-1
chr6_1 exon 22853254 22853328 22853254 ID=Msa0879940-mRNA-1:exon:6317;Parent=Msa0879940-mRNA-1
chr6_1 exon 22853403 22853480 22853403 ID=Msa0879940-mRNA-1:exon:6318;Parent=Msa0879940-mRNA-1
chr6_1 exon 22853645 22853704 22853645 ID=Msa0879940-mRNA-1:exon:6319;Parent=Msa0879940-mRNA-1
chr6_1 exon 22854728 22854790 22854728 ID=Msa0879940-mRNA-1:exon:6320;Parent=Msa0879940-mRNA-1
chr6_1 exon 22854901 22855250 22854901 ID=Msa0879940-mRNA-1:exon:6321;Parent=Msa0879940-mRNA-1
chr6_1 five_prime_UTR 22842765 22842827 22842765 ID=Msa0879940-mRNA-1:five_prime_utr;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22842828 22843035 22842828 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22843626 22843812 22843626 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22843910 22843975 22843910 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22844151 22844217 22844151 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22844345 22844413 22844345 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22844712 22844852 22844712 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22845174 22845282 22845174 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22845439 22845494 22845439 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22845937 22846011 22845937 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22846086 22846163 22846086 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22846279 22846356 22846279 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22846857 22846919 22846857 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22847017 22847057 22847017 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22849784 22849854 22849784 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22851334 22851520 22851334 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22851627 22851692 22851627 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22851841 22851907 22851841 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22852036 22852104 22852036 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22852391 22852531 22852391 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22853048 22853134 22853048 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22853254 22853328 22853254 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22853403 22853480 22853403 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22853645 22853704 22853645 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22854728 22854790 22854728 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 CDS 22854901 22855143 22854901 ID=Msa0879940-mRNA-1:cds;Parent=Msa0879940-mRNA-1
chr6_1 three_prime_UTR 22855144 22855250 22855144 ID=Msa0879940-mRNA-1:three_prime_utr;Parent=Msa0879940-mRNA-1
Gene Sequence

>Msa0879940

ATGGAGAAAGTGAAACCGTTTATTATATTATCACCAACACAAACTCACAGGTGCTGGAGCCATTGGAATTGTATTCCTTCATCATCATCATCATTTCATTCACATTTTGTTTCTTTTACTCTTTCAACAACCTGCAGGGTTAACTCTCTGTTCCAACAACGTTGTATTCATCAATCAACACTAGCCAATCATCATTCCCAAATACTAGAAGAAGAAGTAATGGCAAGTAGTAGATCACAGTTGGTGAGATTCCCTTTATTGATGGATGATACTGATACTACCAAATACTCAGCATGCACCATTCCTTGGAGGTTCCCTTCTGATGATCCACGTGTAGTCACTCCCACCGAGTTATCTTGGATAAATCTCCTAGACAGTGGTATCCCCTCCTACAAGAAGCGTGCTGAGAGTGATACTTCTGTTCCTGATGCTGCAAATAAAGCTGAAATTTTTGCTCAAAGGTATGCTGAAATACTTGAAGATTTGAAGAAAGATCCTGCAAGTCATGGCGATCCTCTTGATATCCTTCTTCTATGTAGACTTCGTGAGGAAGTTCTTAAAGAACTGGGGTTCAGAGATATCTTCAAGAAAGTCAAGGCTGAAGAGAATGCAAAGGCAATCTCCCTATTTGAGAATGTTGTTCGTCTTAATGATGCTATTGAAGATGAAGGCAAGCGACTTGAGAATTTAGTTAGAGGAATTTTTGCAGGGAACGTATTTGATCTTGGTTCTCCCCAGCTTGCAGAAGCTTTCTCTAGGGATGGAATGTCGTTTTCGGCAACTTGTGAAAATCTTCTCCCTCGACCATGGATTATCGATGACCTTGACATTTTGAAAATCAGATGGAATATAATTTTAGGTATTTTGCCATTTGCAAGGGAGCTCCTTCGGCGTGGGAGTCAGGTTGTTTTGGCTGCTAATGACTTACCTTCTATCAATGATGTGACTTACTCTGAGCTAATTGAAATTATATCAAAGTTAAAGGATGAAGAAGGACGTCTCTTGGGTGTCAGCACTTCAAATCTTTTAATTGCCAACTCTGGAAATGATTTACCTGTTATTGATCTTACAAAGGTGTCACAAGAGCTTGCTTCCCTTACCAGTGATGTAGATCTTGTCATTTTAGAAGGGATGGGGCGCGGAATAGAAACAAATCTCTATGCTCAATTTAAATGCGATTCTATGAAGATTGCAATGGTGAAACATCCTGAGGTTGCAGAATTTCTTGAGTCACGGATGGTTAACTCTCTATCCCAACAACATTGCATTCATCAATCAGCACTAGCCAATCATCATTCCCAAACACTAGAAGAAGAAGCAATGGCAATTAGTACACCACAGTTGGTGAGATTCCCTTTGTTGATGGATGATACTGATACTACCAATTATTCAGCATGCACCATTCCTTGGAGGCTCCCTTCTGATGATCCAAAAGTCCCCACTCCCACTGAGTTATCTTGGATTAATCTCTTTTGCAGTGGTATCCCCTCCTACAAGAAGCGTGCTGAGAGTGATACTTCTGTTCCTGATGCTGCAAATAAAGCCGAAATTTATGCTCAAAGGTATGCTAAAATACTTGAAGATATGAAGAAAGATCCTGCAAGTCATGGAAATCCTCTTGATATCCTTCTTCTATGCAGACTTTGCGAGGAACTCCTTAAAGAACTAGGGTTTAGAGATATCTTCGAGAAAGTCAAGAATGAAGAGAATGCAAAGGCCATCTCCCTATTTGAGAAAGTTGTTCGTCATAATGATGCAATTAAAGATGAAGGCAAGCGACTTGAGAATTTAGTTAGAGGAATTTTTGCGGGGAACGTATTTGATCTTGGTTCTCCCCAGGTTATCATATTTGTTGATAACTCTGGTGCAGATATTATTTTAGGTGTTTTGCCATTTGCAAGGGAGCTCCTTCGGCGTGGGAGTCAGGTTATTTTGGCTGCTAATGACTTACCTTCTATCAATGATGTGACTTATTCTGAGTTAATTGAAATTGTATCAAAGTTAAAGGATGAAGAAGGACGTCTCTTGGGTGTCAGCACTTCAAATCTATTAATTACTAACTCTGGAAATGATTTACCTGTGTCACAAGAGCTTGCTTGCCTTGCCAGTGATGTAGATCTTGTCATTTTAGAAGGAATGGGTCGTGGAATAGAAACAAATTTCTATGCTCAATTTAAATGTGATTCTATGAAGATTGCAATGGTGAAAAATACCGGAGTTGCAAAATTTCTTAAATCGCGGATGTATGACTGTGTAATTAAATACGATGCAATTGTTGTTAAAATACCTATTAGAATCTTAAAATCCTACGATTTGCGATTTTGCTCTACCTTACTGATCTCAATCCTGAGTAGAATCCTAAAATATGCAAAACCCGTTCAAAATTGTTTATGTTTTAGTGATTTTTCTCTGCCTGATAATTGGCGTGTTCTTTATGTGATGTAG

Protein sequence

>Msa0879940

MEKVKPFIILSPTQTHRCWSHWNCIPSSSSSFHSHFVSFTLSTTCRVNSLFQQRCIHQSTLANHHSQILEEEVMASSRSQLVRFPLLMDDTDTTKYSACTIPWRFPSDDPRVVTPTELSWINLLDSGIPSYKKRAESDTSVPDAANKAEIFAQRYAEILEDLKKDPASHGDPLDILLLCRLREEVLKELGFRDIFKKVKAEENAKAISLFENVVRLNDAIEDEGKRLENLVRGIFAGNVFDLGSPQLAEAFSRDGMSFSATCENLLPRPWIIDDLDILKIRWNIILGILPFARELLRRGSQVVLAANDLPSINDVTYSELIEIISKLKDEEGRLLGVSTSNLLIANSGNDLPVIDLTKVSQELASLTSDVDLVILEGMGRGIETNLYAQFKCDSMKIAMVKHPEVAEFLESRMVNSLSQQHCIHQSALANHHSQTLEEEAMAISTPQLVRFPLLMDDTDTTNYSACTIPWRLPSDDPKVPTPTELSWINLFCSGIPSYKKRAESDTSVPDAANKAEIYAQRYAKILEDMKKDPASHGNPLDILLLCRLCEELLKELGFRDIFEKVKNEENAKAISLFEKVVRHNDAIKDEGKRLENLVRGIFAGNVFDLGSPQVIIFVDNSGADIILGVLPFARELLRRGSQVILAANDLPSINDVTYSELIEIVSKLKDEEGRLLGVSTSNLLITNSGNDLPVSQELACLASDVDLVILEGMGRGIETNFYAQFKCDSMKIAMVKNTGVAKFLKSRMYDCVIKYDAIVVKIPIRILKSYDLRFCSTLLISILSRILKYAKPVQNCLCFSDFSLPDNWRVLYVM*