AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021570 MtrunA17_Chr1g0173381 99.928 1383 1 0 1 1383 1 1383 0.0 2854
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021570 AT5G13630.1 85.105 1383 204 1 1 1383 1 1381 0.0 2479
Msa0021570 AT5G13630.2 84.762 1260 190 1 1 1260 1 1258 0.0 2244

Find 346 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCTTGTTCAAAATTTA+AGG 0.029079 1_1:+38866808 Msa0021570:CDS
TTTCCTGTTGGTAAAACTTT+AGG 0.150723 1_1:-38865816 None:intergenic
CCAAGCTCTTCAAGGCTTAC+AGG 0.177877 1_1:-38866086 None:intergenic
CAATCTCTCTACCACTATTT+TGG 0.194233 1_1:-38865895 None:intergenic
CCTATCACCTCGGTAAAATT+TGG 0.197602 1_1:-38865655 None:intergenic
CCACAGCATTAGAAGAAAAT+TGG 0.204481 1_1:+38864638 Msa0021570:CDS
CTCACTGGATTTGCTCTTGT+TGG 0.205906 1_1:+38862912 Msa0021570:CDS
AATTTCTTGAAGATGATTTC+TGG 0.209710 1_1:+38862513 Msa0021570:CDS
CATATCTTTATATATAAAAT+TGG 0.211882 1_1:-38867832 None:intergenic
AGTTGATCAACTTTAGAATT+TGG 0.219361 1_1:-38861775 None:intergenic
TTAGAATTTGGTAGAGTAAA+TGG 0.219936 1_1:-38861763 None:intergenic
TTCCTGTTGGTAAAACTTTA+GGG 0.231681 1_1:-38865815 None:intergenic
TCTAGCCCTCCGGCGAAAAT+TGG 0.232885 1_1:-38862816 None:intergenic
TCCAATGAAAACGGTTTCTA+TGG 0.257552 1_1:-38861447 None:intergenic
ACAAATGGTTTCTTAGTAAT+AGG 0.269270 1_1:-38862873 None:intergenic
CAAAGGAGTCATATTGTTAC+TGG 0.270706 1_1:+38862732 Msa0021570:CDS
ATGATGAGGGCTTGCAGATT+TGG 0.274240 1_1:-38864791 None:intergenic
AAGAAATTCTGCAAATTATC+AGG 0.274265 1_1:-38862498 None:intergenic
ATATCTTGAGTCTACAGTTT+TGG 0.275285 1_1:+38862463 Msa0021570:CDS
TCTTCTTCAGATGAATCTTC+TGG 0.278031 1_1:+38866401 Msa0021570:intron
CTCATCCCTACCTGCTTTCC+AGG 0.282649 1_1:-38864904 None:intergenic
AAGCCAATGGACGCGGATAT+TGG 0.283143 1_1:+38867503 Msa0021570:CDS
TCATTACGTTGCTGTGATTA+TGG 0.283792 1_1:+38862764 Msa0021570:CDS
TATAAAATTGGAAGATATAT+TGG 0.287686 1_1:-38867820 None:intergenic
GCTGATGCTGTTCTTCATTT+CGG 0.304689 1_1:+38864856 Msa0021570:CDS
GCATTTGCAACTGCACAAAA+AGG 0.305978 1_1:-38867784 None:intergenic
GGACAGGATGGATGCAGTTT+TGG 0.317279 1_1:+38862227 Msa0021570:CDS
TTGTAAGCAATGTTGAGATT+TGG 0.321057 1_1:-38864577 None:intergenic
TTTCCGATGAGTCAAGGTTT+TGG 0.325504 1_1:-38866743 None:intergenic
AACATGCCTTCATACCATTT+GGG 0.328582 1_1:-38867283 None:intergenic
GGTGATGAGGTTGAACAAAT+TGG 0.329239 1_1:+38862269 Msa0021570:CDS
CAGTGACAAAGGAGTATTAA+AGG 0.335696 1_1:+38865467 Msa0021570:CDS
GCTCAGGTTCTGTGGATGAT+TGG 0.337444 1_1:+38866017 Msa0021570:CDS
AGTGGCAAAGCAACAATATA+AGG 0.338462 1_1:-38862993 None:intergenic
GTTGGATGGAGTGCAACTTC+TGG 0.339333 1_1:+38867358 Msa0021570:CDS
TAACATGCCTTCATACCATT+TGG 0.343041 1_1:-38867284 None:intergenic
TATGGTTAGTGGTGAAAGTT+TGG 0.345707 1_1:-38861429 None:intergenic
CTTCTGGACAAGTTGACAAT+TGG 0.346443 1_1:+38867374 Msa0021570:CDS
CTCATCACCTCAGGCATTGA+TGG 0.348300 1_1:-38862255 None:intergenic
ACACTCTGAGCTAGTATAGA+AGG 0.354279 1_1:-38865414 None:intergenic
CACAGCATTAGAAGAAAATT+GGG 0.354684 1_1:+38864639 Msa0021570:CDS
GAAGATGCTAATATCTTCAT+TGG 0.357021 1_1:+38862144 Msa0021570:CDS
GTTCCTACATTTCCTTTGTC+TGG 0.357797 1_1:-38864409 None:intergenic
GAAGCTGGTGCAAACATTCT+TGG 0.362090 1_1:+38867480 Msa0021570:CDS
TGTAAGCAATGTTGAGATTT+GGG 0.367376 1_1:-38864576 None:intergenic
CACAGCCAGGTTTATGTTTG+AGG 0.367959 1_1:-38866571 None:intergenic
GCACAAATCCCAACTCCTTC+AGG 0.369393 1_1:+38867458 Msa0021570:CDS
TATTTCACACTAATATATAA+TGG 0.369867 1_1:-38867858 None:intergenic
ATCGGGTCGCCTCCAGGTCC+TGG 0.370873 1_1:-38865786 None:intergenic
AACCAAGTTTCAGAGAAATA+AGG 0.371756 1_1:-38867653 None:intergenic
TGCATTGCATTTCAATCTAA+AGG 0.373359 1_1:-38861878 None:intergenic
CTCTGCTGGTTCGTCTAATT+CGG 0.375638 1_1:-38866445 None:intergenic
AAATGCACCTGTTGTTGGTT+TGG 0.377667 1_1:+38862704 Msa0021570:CDS
ATATATTGGCCAAGTTTGTT+TGG 0.380572 1_1:-38867806 None:intergenic
TGTTGGAGGGCCTGCTAGAC+AGG 0.383679 1_1:+38862929 Msa0021570:CDS
GTTCAAAATTTAAGGAAAGA+TGG 0.385666 1_1:+38866816 Msa0021570:CDS
GCAGCATAGTAATAGACATT+TGG 0.387540 1_1:-38864964 None:intergenic
AAACTTTAGGGTTTCTGATC+GGG 0.387766 1_1:-38865803 None:intergenic
GGAGAGAATCTGTTGGTATA+TGG 0.388264 1_1:+38864691 Msa0021570:CDS
TGAATTGGTATGGAACTAGA+AGG 0.388661 1_1:+38862655 Msa0021570:CDS
AACAAGATCTCGCTCTTTAG+TGG 0.389853 1_1:-38865235 None:intergenic
ATAGGTGTTCAACCTACATT+TGG 0.390010 1_1:+38864736 Msa0021570:CDS
TTTCTGATCGGGTCGCCTCC+AGG 0.395290 1_1:-38865792 None:intergenic
TCAACCACTCTTCAGTTGTC+TGG 0.395716 1_1:-38863022 None:intergenic
ACTTGAAGAGCAACTTGAAT+TGG 0.395908 1_1:-38863065 None:intergenic
AGCCAATGGACGCGGATATT+GGG 0.396390 1_1:+38867504 Msa0021570:CDS
CCTAAGAAAACCAATTACTA+TGG 0.396414 1_1:+38861841 Msa0021570:CDS
CTGATACCTGATTGATGAAA+AGG 0.396424 1_1:-38866157 None:intergenic
CTTACATAGTTCATCTCTGC+TGG 0.399333 1_1:-38866459 None:intergenic
TTGGTATATGGTAAGCAATA+TGG 0.404856 1_1:+38864703 Msa0021570:CDS
AATTGCTCCGCGTGATGCTT+CGG 0.405221 1_1:-38865514 None:intergenic
TTATATTGTTGCTTTGCCAC+TGG 0.407521 1_1:+38862995 Msa0021570:CDS
TTACAATAAAGAGCAAGTTT+TGG 0.407523 1_1:-38861665 None:intergenic
CAGGTTTATGTTTGAGGAGT+AGG 0.410638 1_1:-38866565 None:intergenic
TTTCTTCTTGTTCTTCTATG+TGG 0.410823 1_1:-38861515 None:intergenic
ACTGGATTTGCTCTTGTTGG+AGG 0.412121 1_1:+38862915 Msa0021570:CDS
AGTTCAAATGCACCTGTTGT+TGG 0.412786 1_1:+38862699 Msa0021570:CDS
ATCTTTGTACCTTTCAATGC+TGG 0.413975 1_1:-38862546 None:intergenic
GAGTGGTTGAATAGTACTTT+GGG 0.415105 1_1:+38863035 Msa0021570:CDS
AAAGAGCGAGATCTTGTTGT+TGG 0.415342 1_1:+38865240 Msa0021570:CDS
CTGGATTTGCTCTTGTTGGA+GGG 0.415619 1_1:+38862916 Msa0021570:CDS
TAAAGGATGTAGAGCTTCTT+CGG 0.416816 1_1:+38865484 Msa0021570:CDS
CCTTGTGGACTCCATGTCAT+TGG 0.417130 1_1:+38865306 Msa0021570:CDS
AAATTTGGGTTGATGATCAA+TGG 0.418917 1_1:+38861723 Msa0021570:exon
CTAGTGGTTATGAGGGTGTT+CGG 0.420010 1_1:+38867308 Msa0021570:CDS
ACCAGCTTCCTGAAGGAGTT+GGG 0.423566 1_1:-38867466 None:intergenic
AGATTGAAATGCAATGCAAT+TGG 0.427450 1_1:+38861883 Msa0021570:CDS
AAGAAGAATACTTCTTCAGC+TGG 0.430435 1_1:+38862351 Msa0021570:CDS
CAATATGGTAATGTATTCAT+AGG 0.430782 1_1:+38864718 Msa0021570:CDS
GCTTTCCAGGCATGAATTCA+AGG 0.431681 1_1:-38864891 None:intergenic
AAAGAGTATTTGAATTGGTA+TGG 0.436541 1_1:+38862645 Msa0021570:CDS
GGAAGCTCCACACCCTCCTC+TGG 0.436994 1_1:-38865213 None:intergenic
AGTACAAGGGCAACTGTCTC+AGG 0.436994 1_1:-38865954 None:intergenic
GATTGTGATGCTCCTGGTGC+AGG 0.439076 1_1:+38866663 Msa0021570:CDS
TAGGTCTTCCAAGCTCTTCA+AGG 0.440235 1_1:-38866094 None:intergenic
TGGCTGTGGAGAATTCTTCA+TGG 0.440253 1_1:+38866586 Msa0021570:CDS
CGAAAATGCAGGACTGTACA+AGG 0.441945 1_1:+38865062 Msa0021570:CDS
CACCAGCTTCCTGAAGGAGT+TGG 0.442281 1_1:-38867467 None:intergenic
CTCTACAAATTTACCTTCCA+AGG 0.442552 1_1:-38865763 None:intergenic
TGGAGGAGTAAGATAGCTTA+TGG 0.442966 1_1:-38865037 None:intergenic
TAGTGGTTATGAGGGTGTTC+GGG 0.443943 1_1:+38867309 Msa0021570:CDS
TTCTGCTAAGGTACATGTCT+TGG 0.445406 1_1:-38866626 None:intergenic
TTGGCTATGGTAGCCTCTGA+AGG 0.445632 1_1:-38864994 None:intergenic
GAAAATTGGGGAAAGCCTCC+TGG 0.445986 1_1:+38864652 Msa0021570:CDS
ACAGATAATATTAAGACATA+TGG 0.446503 1_1:+38865984 Msa0021570:CDS
GCTGGTCGGGATCCCAAAAC+AGG 0.449426 1_1:+38863131 Msa0021570:CDS
AAATGCAATGCAATTGGTAA+TGG 0.450220 1_1:+38861889 Msa0021570:CDS
ATCAAAGCTTCAATAGCCCT+TGG 0.450638 1_1:-38862957 None:intergenic
AGCAACTGCTTCCATGGCTG+TGG 0.450885 1_1:-38865337 None:intergenic
GGGAAGTTTAAAACAAGCCT+TGG 0.450982 1_1:+38865746 Msa0021570:CDS
GCATCTTGAGCTTTATCACT+TGG 0.453125 1_1:-38862432 None:intergenic
CATGGAGTCCACAAGGCAAC+AGG 0.453384 1_1:-38865299 None:intergenic
ATTTGCGTAGCTCCTGCGTT+TGG 0.458715 1_1:-38865013 None:intergenic
GTTGCATTGCCAGAGCTAGA+TGG 0.458979 1_1:+38863086 Msa0021570:CDS
CTTACCTCCATCCTTGGATT+CGG 0.459055 1_1:+38865597 Msa0021570:CDS
TCCCAACTCCTTCAGGAAGC+TGG 0.459347 1_1:+38867465 Msa0021570:CDS
AGAGTGGTTGAATAGTACTT+TGG 0.460158 1_1:+38863034 Msa0021570:CDS
TTCAAAATTTAAGGAAAGAT+GGG 0.460190 1_1:+38866817 Msa0021570:CDS
AATAAACTTACCTCCATCCT+TGG 0.461503 1_1:+38865591 Msa0021570:CDS
TTCTGGACAAGTTGACAATT+GGG 0.462149 1_1:+38867375 Msa0021570:CDS
ATAGTTTCTTCCAATGAAAA+CGG 0.462623 1_1:-38861456 None:intergenic
CTACATTTCCTTTGTCTGGC+GGG 0.463784 1_1:-38864405 None:intergenic
GTCTTGAATGAATGTTGTGT+TGG 0.464042 1_1:-38867410 None:intergenic
CTCTCCATTGCTGCTGTAGT+AGG 0.464264 1_1:-38865870 None:intergenic
GGTAAATACTTCAAAACCTT+AGG 0.465580 1_1:-38862411 None:intergenic
GACGTCGTCGTTAATTGCTC+TGG 0.466194 1_1:+38866122 Msa0021570:CDS
GGTTCCCTTGAATTCATGCC+TGG 0.466716 1_1:+38864886 Msa0021570:CDS
TCTTCTAATGCTGTGGCATA+GGG 0.468263 1_1:-38864631 None:intergenic
TGAGGGAAAGATGGTATTTG+AGG 0.468383 1_1:-38861639 None:intergenic
AAATGGAGGAGAAAACGTTT+AGG 0.469039 1_1:-38864441 None:intergenic
CAATGTAGCAACTGCTTCCA+TGG 0.470298 1_1:-38865343 None:intergenic
AGTACTTGGGAGAATGTTTG+AGG 0.471779 1_1:+38865700 Msa0021570:CDS
CATACATACAAGGTGCTAAA+GGG 0.474043 1_1:-38862614 None:intergenic
TGAGAAACACAACTCAACTT+TGG 0.474199 1_1:+38861572 Msa0021570:five_prime_UTR
TTCTTCTAATGCTGTGGCAT+AGG 0.474834 1_1:-38864632 None:intergenic
CAGCAGAGATGAACTATGTA+AGG 0.475157 1_1:+38866460 Msa0021570:CDS
CTTGGATGATCCTGTCTAGC+AGG 0.475362 1_1:-38862939 None:intergenic
TACCTTATTTCTCTGAAACT+TGG 0.477509 1_1:+38867651 Msa0021570:three_prime_UTR
TTGCAAATGCCAAACAAACT+TGG 0.478518 1_1:+38867797 Msa0021570:three_prime_UTR
TGAATTCATGCCTGGAAAGC+AGG 0.481681 1_1:+38864894 Msa0021570:CDS
TAGGAATAGATTGTGGATCC+AGG 0.482376 1_1:-38865851 None:intergenic
AGAGCGCACTACTAATAGTA+AGG 0.482393 1_1:+38865548 Msa0021570:CDS
AATCAATGCTTCTGAAGTCT+CGG 0.483709 1_1:-38864515 None:intergenic
GAGTGGAGCAGCTTTGCACC+AGG 0.483821 1_1:+38863645 Msa0021570:CDS
TGCAAAACCAAACCAACAAC+AGG 0.486344 1_1:-38862711 None:intergenic
CATGGAAGCAGTTGCTACAT+TGG 0.487820 1_1:+38865344 Msa0021570:CDS
TTCCCAATATCCGCGTCCAT+TGG 0.488102 1_1:-38867506 None:intergenic
TACATTAACAATGATGCCAT+TGG 0.489859 1_1:-38867699 None:intergenic
CATGTTATCTAGTGGTTATG+AGG 0.489935 1_1:+38867300 Msa0021570:CDS
AAAACGGTTTCTATGGTTAG+TGG 0.490304 1_1:-38861440 None:intergenic
TCCATTCCTCCATCTAGCTC+TGG 0.490366 1_1:-38863095 None:intergenic
GTAGCTCCTGCGTTTGGCTA+TGG 0.491501 1_1:-38865007 None:intergenic
TATCTGTTCCCCACAGTACA+AGG 0.491790 1_1:-38865968 None:intergenic
TACCTGGGCATTGGCAGTGG+TGG 0.492165 1_1:-38866868 None:intergenic
AATCCCTTGCTCAGGTTCTG+TGG 0.492849 1_1:+38866009 Msa0021570:CDS
CCAAGCTGTTGAACCCCAAA+TGG 0.494653 1_1:+38867269 Msa0021570:CDS
TCATACATACAAGGTGCTAA+AGG 0.498214 1_1:-38862615 None:intergenic
AGTGATGGTTACAATGTTGA+AGG 0.498990 1_1:+38864487 Msa0021570:CDS
ACGTGGCAAAATGTAGTCAT+TGG 0.500416 1_1:-38861403 None:intergenic
CCATTTGGGGTTCAACAGCT+TGG 0.501266 1_1:-38867269 None:intergenic
AAGCTGCTGTTGAGAAAGAA+AGG 0.502411 1_1:+38862205 Msa0021570:CDS
GATATCACAGAATTCACAAA+TGG 0.502956 1_1:-38862888 None:intergenic
TTTCCAAAACCTTGACTCAT+CGG 0.503416 1_1:+38866740 Msa0021570:CDS
ATGAAGAATTCTCCACAGCC+AGG 0.504233 1_1:-38866584 None:intergenic
ATGTCAAAGAGTATTTGAAT+TGG 0.504263 1_1:+38862640 Msa0021570:CDS
CTTCTCGAACTTCAACCCCT+AGG 0.505192 1_1:-38866509 None:intergenic
CTCAGCCCATCTGATTGCCC+TGG 0.505958 1_1:-38863663 None:intergenic
AAGAAAACATTGAGAAGTTG+AGG 0.507918 1_1:+38867536 Msa0021570:CDS
TTGTTCAACCTCATCACCTC+AGG 0.508260 1_1:-38862264 None:intergenic
GGAGTAGGATCCTGAGGCAT+TGG 0.508323 1_1:-38866550 None:intergenic
TTCTCGAACTTCAACCCCTA+GGG 0.508890 1_1:-38866508 None:intergenic
ATCAATGCTTCTGAAGTCTC+GGG 0.509386 1_1:-38864514 None:intergenic
AAAACTTTAGGGTTTCTGAT+CGG 0.510451 1_1:-38865804 None:intergenic
TCAATGAAGAACTTCTCAAC+CGG 0.510611 1_1:-38862849 None:intergenic
AAATTTGTAGAGCCAGGACC+TGG 0.510710 1_1:+38865774 Msa0021570:CDS
AAGAGCGAGATCTTGTTGTT+GGG 0.510971 1_1:+38865241 Msa0021570:CDS
CTAAAAGAACTTCAAAGTGA+TGG 0.511192 1_1:+38864472 Msa0021570:CDS
TGGTAGAGAGATTGCTTGAA+AGG 0.512014 1_1:+38865904 Msa0021570:CDS
TGGCATAGGGAGTGAGAGCT+TGG 0.512578 1_1:-38864618 None:intergenic
AAGTCGAACTGTCTCTGAAA+GGG 0.514784 1_1:-38867236 None:intergenic
GAAGTGGAAGATAAAATTGA+AGG 0.516822 1_1:+38867571 Msa0021570:CDS
AGGAAAGAATATTCATGCCC+TGG 0.518876 1_1:+38865833 Msa0021570:CDS
GCTTGTGAGGACTTTGCCTA+AGG 0.519621 1_1:+38862395 Msa0021570:CDS
AGGATCTTCTCCAATGCCTC+AGG 0.520022 1_1:+38866540 Msa0021570:CDS
GCATGAATATTCTTTCCTGT+TGG 0.520661 1_1:-38865828 None:intergenic
CCTGTAAGCCTTGAAGAGCT+TGG 0.521389 1_1:+38866086 Msa0021570:CDS
AGACAGTTGCCCTTGTACTG+TGG 0.524055 1_1:+38865958 Msa0021570:CDS
AATGGAGAGTGCCAAAATAG+TGG 0.525754 1_1:+38865884 Msa0021570:CDS
GTGATGAGGTTGAACAAATT+GGG 0.525757 1_1:+38862270 Msa0021570:CDS
GCACTTGATCGTGTGGAAGA+AGG 0.526412 1_1:+38865378 Msa0021570:CDS
ATGGAACAAGCTGAAGCCCT+AGG 0.527755 1_1:+38866492 Msa0021570:CDS
ATGCAATCTCGACAAGGATG+TGG 0.527790 1_1:+38865185 Msa0021570:CDS
TTTGCACCAGGGCAATCAGA+TGG 0.527982 1_1:+38863657 Msa0021570:CDS
CTTCCGAGGTTATCAGCTAT+CGG 0.530437 1_1:-38866047 None:intergenic
GAAGGTAAATTTGTAGAGCC+AGG 0.531858 1_1:+38865768 Msa0021570:CDS
GTGATAAAGCTCAAGATGCT+AGG 0.532035 1_1:+38862436 Msa0021570:CDS
ATATGGAGAATCCCTTGCTC+AGG 0.535247 1_1:+38866001 Msa0021570:CDS
CTGTTGAGAAAGAAAGGGAC+AGG 0.535797 1_1:+38862211 Msa0021570:CDS
CTGAGCTAGTATAGAAGGGA+GGG 0.536608 1_1:-38865409 None:intergenic
TATTCCTACTACAGCAGCAA+TGG 0.537673 1_1:+38865866 Msa0021570:CDS
GAGTGAGAGCTTGGTATTCA+CGG 0.538327 1_1:-38864609 None:intergenic
CCGCCAGACAAAGGAAATGT+AGG 0.538739 1_1:+38864406 Msa0021570:CDS
TCACTCAAGGACACTGGCCG+CGG 0.538856 1_1:+38865123 Msa0021570:CDS
TTGAACCCCAAATGGTATGA+AGG 0.539742 1_1:+38867277 Msa0021570:CDS
TTGGCAACAGCATCAATTCA+AGG 0.540456 1_1:-38867680 None:intergenic
CATATTGTTACTGGTGATGA+TGG 0.543100 1_1:+38862741 Msa0021570:CDS
GTTCTTCATTTCGGCACACA+CGG 0.543326 1_1:+38864865 Msa0021570:CDS
ATATTCCCGATCAGACTGTC+GGG 0.544764 1_1:-38864940 None:intergenic
TGTGAGTTCAATTATTAGCA+CGG 0.546575 1_1:+38865155 Msa0021570:CDS
CAAGTCGAACTGTCTCTGAA+AGG 0.548201 1_1:-38867237 None:intergenic
ATTGTAGCTGATAATGAAGT+GGG 0.548716 1_1:+38865726 Msa0021570:CDS
GATTCGGCATAAACGAGCCA+TGG 0.549574 1_1:+38865613 Msa0021570:CDS
GTTATCCCGACAGTCTGATC+GGG 0.550046 1_1:+38864935 Msa0021570:CDS
TGTTATCCCGACAGTCTGAT+CGG 0.550112 1_1:+38864934 Msa0021570:CDS
TTCAGTTTCCCGCCAGACAA+AGG 0.551110 1_1:+38864397 Msa0021570:CDS
AAAATTGGGGAAAGCCTCCT+GGG 0.551960 1_1:+38864653 Msa0021570:CDS
TCTGGATAGAGCAGTGAAGA+TGG 0.553343 1_1:+38866419 Msa0021570:CDS
CCTACATTTCCTTTGTCTGG+CGG 0.555098 1_1:-38864406 None:intergenic
CCATCCGCATTCAGATTCCC+AGG 0.556819 1_1:-38864670 None:intergenic
GAATTGGTATGGAACTAGAA+GGG 0.557064 1_1:+38862656 Msa0021570:CDS
TCCGACAAGTACTGAATCCA+TGG 0.557088 1_1:-38865630 None:intergenic
GAAGGTGTATGCTAAGATCA+TGG 0.558148 1_1:+38865263 Msa0021570:CDS
TCTTATGTTCCAGCATTGAA+AGG 0.558366 1_1:+38862537 Msa0021570:CDS
AGCATTGAAAGGTACAAAGA+TGG 0.560280 1_1:+38862548 Msa0021570:CDS
TCCCGACCAGCGAAAACTAT+CGG 0.560614 1_1:-38863119 None:intergenic
ACTGCTTCCATGGCTGTGGG+TGG 0.561275 1_1:-38865333 None:intergenic
CTACTCCTCAAACATAAACC+TGG 0.561850 1_1:+38866566 Msa0021570:CDS
AAGAGGCTTACTAACACAGT+TGG 0.562219 1_1:+38867340 Msa0021570:CDS
ACTCCTCCAGCCGAAAATGC+AGG 0.564072 1_1:+38865051 Msa0021570:CDS
GGATGTGGATTTGCCAGAGG+AGG 0.564165 1_1:+38865200 Msa0021570:CDS
CCTGGGAATCTGAATGCGGA+TGG 0.565028 1_1:+38864670 Msa0021570:CDS
CGATAGCTGATAACCTCGGA+AGG 0.565402 1_1:+38866048 Msa0021570:CDS
TTAACGACGACGTCAACCCT+AGG 0.565771 1_1:-38866113 None:intergenic
TGAATTGATGCTGTTGCCAA+TGG 0.566543 1_1:+38867683 Msa0021570:three_prime_UTR
GCGAGATCTTGTTGTTGGGA+AGG 0.566549 1_1:+38865245 Msa0021570:CDS
AGGAATAGATTGTGGATCCA+GGG 0.566579 1_1:-38865850 None:intergenic
CACTCTGAGCTAGTATAGAA+GGG 0.566931 1_1:-38865413 None:intergenic
ATTAGTAGTGCGCTCTACAA+AGG 0.567137 1_1:-38865541 None:intergenic
TGGCTATGGTAGCCTCTGAA+GGG 0.567287 1_1:-38864993 None:intergenic
TACCACCACTGCCAATGCCC+AGG 0.567361 1_1:+38866866 Msa0021570:CDS
ACATGCCTTCATACCATTTG+GGG 0.567611 1_1:-38867282 None:intergenic
ACTTGAGGCTAAAGGTGCTA+AGG 0.567955 1_1:+38862788 Msa0021570:CDS
GACAGTTGCCCTTGTACTGT+GGG 0.568375 1_1:+38865959 Msa0021570:CDS
TTCTTGGAAGCCAATGGACG+CGG 0.569693 1_1:+38867496 Msa0021570:CDS
CTTTCCAGGCATGAATTCAA+GGG 0.570369 1_1:-38864890 None:intergenic
GAGTCCCGCCTGTTGCCTTG+TGG 0.570560 1_1:+38865291 Msa0021570:CDS
GGATTTGCCAGAGGAGGGTG+TGG 0.570930 1_1:+38865206 Msa0021570:CDS
TGGTGAGCCACCCACAGCCA+TGG 0.572051 1_1:+38865326 Msa0021570:CDS
TCATGCCTGGAAAGCAGGTA+GGG 0.572227 1_1:+38864899 Msa0021570:CDS
GCAACTGCTTCCATGGCTGT+GGG 0.573262 1_1:-38865336 None:intergenic
GCCAGAGCTAGATGGAGGAA+TGG 0.573307 1_1:+38863094 Msa0021570:CDS
AGTTTAAAACAAGCCTTGGA+AGG 0.573560 1_1:+38865750 Msa0021570:CDS
AGCTGCTGTTGAGAAAGAAA+GGG 0.574923 1_1:+38862206 Msa0021570:CDS
TGAAGAGCTTGGAAGACCTA+GGG 0.575077 1_1:+38866097 Msa0021570:CDS
AATTCTGTGATATCTCTCAC+TGG 0.577320 1_1:+38862897 Msa0021570:CDS
TTGCACCAGGGCAATCAGAT+GGG 0.578411 1_1:+38863658 Msa0021570:CDS
AATTGTAGCTGATAATGAAG+TGG 0.581181 1_1:+38865725 Msa0021570:CDS
TTGAAGAGCTTGGAAGACCT+AGG 0.581627 1_1:+38866096 Msa0021570:CDS
TCACCTTCGTAGCCAAATGT+AGG 0.581846 1_1:-38864748 None:intergenic
TCTATACTAGCTCAGAGTGT+AGG 0.582656 1_1:+38865417 Msa0021570:CDS
GCCATGGATTCAGTACTTGT+CGG 0.583198 1_1:+38865629 Msa0021570:CDS
CTCAAACATAAACCTGGCTG+TGG 0.583568 1_1:+38866572 Msa0021570:CDS
GGGAGATTTCCGATGAGTCA+AGG 0.586930 1_1:-38866749 None:intergenic
ATTGGAGAAGATCCTTGTTG+CGG 0.587479 1_1:-38866532 None:intergenic
AAGCAAAAGACTTTCTGCTA+AGG 0.588891 1_1:-38866638 None:intergenic
TGGAACAAGCTGAAGCCCTA+GGG 0.589177 1_1:+38866493 Msa0021570:CDS
ACAAGATCTCGCTCTTTAGT+GGG 0.590525 1_1:-38865234 None:intergenic
TGAGAAAGAAAGGGACAGGA+TGG 0.590862 1_1:+38862215 Msa0021570:CDS
CAGCTGCTGAGACTGATGAT+TGG 0.591859 1_1:-38862014 None:intergenic
GAGGCAGTTGTACTCAGAAG+TGG 0.592377 1_1:+38867555 Msa0021570:CDS
CTATGTAAGGAAGCATGCAA+TGG 0.593996 1_1:+38866473 Msa0021570:CDS
GCTCGTTTATGCCGAATCCA+AGG 0.594381 1_1:-38865608 None:intergenic
GGAGTCCACAAGGCAACAGG+CGG 0.595305 1_1:-38865296 None:intergenic
AAATCTGCAAGCCCTCATCA+TGG 0.595409 1_1:+38864793 Msa0021570:CDS
CAACCTACATTTGGCTACGA+AGG 0.595624 1_1:+38864745 Msa0021570:CDS
CAAACATTCTTGGAAGCCAA+TGG 0.597139 1_1:+38867490 Msa0021570:CDS
CTGCTAGACAGGATCATCCA+AGG 0.598388 1_1:+38862940 Msa0021570:CDS
TGCTGTGATTATGGAACTTG+AGG 0.601587 1_1:+38862773 Msa0021570:CDS
TGTTTGCACCAGCTTCCTGA+AGG 0.602417 1_1:-38867473 None:intergenic
CAAGGCTTACAGGTTCTACA+CGG 0.603134 1_1:-38866076 None:intergenic
GTATCAGCAATATATGCACT+TGG 0.603205 1_1:-38866846 None:intergenic
TCACGCTCTTCACAAGAGAG+TGG 0.605513 1_1:+38863628 Msa0021570:CDS
AAGCAAATTTGAAAGAACAA+AGG 0.605667 1_1:+38861597 Msa0021570:five_prime_UTR
TGCTAGACAGGATCATCCAA+GGG 0.605763 1_1:+38862941 Msa0021570:CDS
ATGTTATCTAGTGGTTATGA+GGG 0.606082 1_1:+38867301 Msa0021570:CDS
CACAACATTCATTCAAGACG+AGG 0.607395 1_1:+38867414 Msa0021570:CDS
GGCTTACTAACACAGTTGGA+TGG 0.608400 1_1:+38867344 Msa0021570:CDS
ATTTATAGAAGCAGTGACAA+AGG 0.608838 1_1:+38865456 Msa0021570:CDS
CATCAATGCCTGAGGTGATG+AGG 0.609334 1_1:+38862256 Msa0021570:CDS
AACTCACAATTTGTTGACCG+CGG 0.612209 1_1:-38865140 None:intergenic
GATGTGGATTTGCCAGAGGA+GGG 0.612511 1_1:+38865201 Msa0021570:CDS
AATATTCCCGATCAGACTGT+CGG 0.612746 1_1:-38864941 None:intergenic
AACGTACGAAACATTCTGCA+AGG 0.613833 1_1:+38862116 Msa0021570:CDS
AGCTAGTATAGAAGGGAGGG+AGG 0.614373 1_1:-38865406 None:intergenic
TCATCCACAGAACCTGAGCA+AGG 0.614478 1_1:-38866013 None:intergenic
TTCATGCCTGGAAAGCAGGT+AGG 0.615731 1_1:+38864898 Msa0021570:CDS
GTTTGAGGAGTAGGATCCTG+AGG 0.617687 1_1:-38866556 None:intergenic
CTACACGGTTGACCCTTCCG+AGG 0.618332 1_1:-38866061 None:intergenic
GTTTATGCCGAATCCAAGGA+TGG 0.618597 1_1:-38865604 None:intergenic
GGTGTTTCCATCAATGCCTG+AGG 0.619009 1_1:+38862248 Msa0021570:CDS
ATCTGTTCCCCACAGTACAA+GGG 0.619067 1_1:-38865967 None:intergenic
GAGTCCACAAGGCAACAGGC+GGG 0.619334 1_1:-38865295 None:intergenic
AGTTGTCGGTTACTTAGTCG+AGG 0.622689 1_1:+38862077 Msa0021570:CDS
TGGTGAAAGTTTGGCCCACG+TGG 0.626188 1_1:-38861420 None:intergenic
TTGGAGAAAAGTAACCGCAT+AGG 0.627390 1_1:-38864772 None:intergenic
CCAATGACATGGAGTCCACA+AGG 0.627709 1_1:-38865306 None:intergenic
GAGCGCACTACTAATAGTAA+GGG 0.627775 1_1:+38865549 Msa0021570:CDS
ATGCTGCAAAACCATGATGA+GGG 0.628612 1_1:-38864804 None:intergenic
TATGCTGCAAAACCATGATG+AGG 0.631679 1_1:-38864805 None:intergenic
ATAGCATGTTGAAGCTTGTG+AGG 0.631952 1_1:+38862382 Msa0021570:CDS
TCTGAGCTAGTATAGAAGGG+AGG 0.635865 1_1:-38865410 None:intergenic
AAGTTCGAGAAGCCGCAACA+AGG 0.636456 1_1:+38866520 Msa0021570:CDS
GCCTCCTGGGAATCTGAATG+CGG 0.636519 1_1:+38864666 Msa0021570:CDS
GTAATGACTGACATCAGTGA+GGG 0.638222 1_1:-38866769 None:intergenic
TGCTGCAAACAACCCTTCAG+AGG 0.638847 1_1:+38864981 Msa0021570:CDS
CATCCACAGAACCTGAGCAA+GGG 0.638930 1_1:-38866012 None:intergenic
AGTGGAGCAGCTTTGCACCA+GGG 0.638947 1_1:+38863646 Msa0021570:CDS
GTGTTCGGGAAATCGAGAAG+AGG 0.640018 1_1:+38867323 Msa0021570:CDS
TAAACAATGCAATCTCGACA+AGG 0.641680 1_1:+38865179 Msa0021570:CDS
CATAGCTGCACTTGATCGTG+TGG 0.643552 1_1:+38865371 Msa0021570:CDS
TTGACATCATCATACATACA+AGG 0.653715 1_1:-38862624 None:intergenic
TCAGTTGTCTGGAAAACCAG+TGG 0.654285 1_1:-38863011 None:intergenic
TATGAAGGCATGTTATCTAG+TGG 0.654989 1_1:+38867292 Msa0021570:CDS
TATCAGTCACTCAAGGACAC+TGG 0.659943 1_1:+38865117 Msa0021570:CDS
AGGCTACCATAGCCAAACGC+AGG 0.661038 1_1:+38865001 Msa0021570:CDS
TGGGTGGCTCACCAATGACA+TGG 0.661910 1_1:-38865317 None:intergenic
CAAGGATGTGGATTTGCCAG+AGG 0.666663 1_1:+38865197 Msa0021570:CDS
CTCGTCGTATCAGTCACTCA+AGG 0.667889 1_1:+38865110 Msa0021570:CDS
TTTGTAGAGCCAGGACCTGG+AGG 0.671079 1_1:+38865777 Msa0021570:CDS
AATCCGATAGCTGATAACCT+CGG 0.674393 1_1:+38866044 Msa0021570:CDS
CAAATAACCGAAGCATCACG+CGG 0.677542 1_1:+38865507 Msa0021570:CDS
GCTACGAAGGTGATCCTATG+CGG 0.681192 1_1:+38864758 Msa0021570:CDS
TGCGGATGGAGAGAATCTGT+TGG 0.692344 1_1:+38864684 Msa0021570:CDS
GATAGCTGATAACCTCGGAA+GGG 0.693097 1_1:+38866049 Msa0021570:CDS
GCATTGCCAGAGCTAGATGG+AGG 0.693777 1_1:+38863089 Msa0021570:CDS
GGAACAAGCTGAAGCCCTAG+GGG 0.694392 1_1:+38866494 Msa0021570:CDS
ATTATGGAACTTGAGGCTAA+AGG 0.694800 1_1:+38862780 Msa0021570:CDS
ACAGCATTAGAAGAAAATTG+GGG 0.696979 1_1:+38864640 Msa0021570:CDS
GAAAATGCAGGACTGTACAA+GGG 0.702354 1_1:+38865063 Msa0021570:CDS
AGTAATGACTGACATCAGTG+AGG 0.702723 1_1:-38866770 None:intergenic
TATGCCGAATCCAAGGATGG+AGG 0.719005 1_1:-38865601 None:intergenic
TCCGCATTCAGATTCCCAGG+AGG 0.735025 1_1:-38864667 None:intergenic
GCTGTAGTAGGAATAGATTG+TGG 0.740284 1_1:-38865858 None:intergenic
GAAAACGTTTAGGTACGCAG+CGG 0.758267 1_1:-38864431 None:intergenic
GCAACAGCATCAATTCAAGG+TGG 0.758641 1_1:-38867677 None:intergenic
ACAGTTGCCCTTGTACTGTG+GGG 0.790700 1_1:+38865960 Msa0021570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATCTTTATATATAAAAT+TGG - chr1_1:38867835-38867854 None:intergenic 10.0%
!!! CAATTTTATATATAAAGATA+TGG + chr1_1:38867833-38867852 Msa0021570:three_prime_UTR 10.0%
!!! TTTTTTTCAGTCTAAAATTT+GGG + chr1_1:38861709-38861728 Msa0021570:five_prime_UTR 15.0%
!! AAATTCACTAATGTTTATTA+AGG + chr1_1:38863599-38863618 Msa0021570:intron 15.0%
!!! AATTTTTGTTTTTGTTATAG+AGG - chr1_1:38866257-38866276 None:intergenic 15.0%
!!! GTTTTCTTAGAAAAAAAATT+GGG + chr1_1:38866926-38866945 Msa0021570:intron 15.0%
!! TATAAAATTGGAAGATATAT+TGG - chr1_1:38867823-38867842 None:intergenic 15.0%
!!! CAATTATGAATAGTTTTTTG+AGG - chr1_1:38861380-38861399 None:intergenic 20.0%
!!! CTTTTTTTCAGTCTAAAATT+TGG + chr1_1:38861708-38861727 Msa0021570:five_prime_UTR 20.0%
!!! TGTTTTTAGATAATGGAATT+TGG + chr1_1:38862589-38862608 Msa0021570:CDS 20.0%
!! AAAAGCAACTTATAACTTAT+AGG + chr1_1:38863396-38863415 Msa0021570:intron 20.0%
!!! TCAGCTTTTAATAAAAGAAT+AGG - chr1_1:38863816-38863835 None:intergenic 20.0%
!!! TTTGTTGACATTTTATATTG+TGG + chr1_1:38864106-38864125 Msa0021570:intron 20.0%
!!! TTGTTGACATTTTATATTGT+GGG + chr1_1:38864107-38864126 Msa0021570:intron 20.0%
!!! ACAAGATGATTTTTAGATAT+TGG - chr1_1:38864202-38864221 None:intergenic 20.0%
!! ACAGATAATATTAAGACATA+TGG + chr1_1:38865984-38866003 Msa0021570:CDS 20.0%
!! GATTCTGTTATTGTTTAAAA+AGG + chr1_1:38866198-38866217 Msa0021570:intron 20.0%
!! TTCAAAATTTAAGGAAAGAT+GGG + chr1_1:38866817-38866836 Msa0021570:CDS 20.0%
!!! CGTTTTCTTAGAAAAAAAAT+TGG + chr1_1:38866925-38866944 Msa0021570:intron 20.0%
! ATAGTTTCTTCCAATGAAAA+CGG - chr1_1:38861459-38861478 None:intergenic 25.0%
! AAGCAAATTTGAAAGAACAA+AGG + chr1_1:38861597-38861616 Msa0021570:five_prime_UTR 25.0%
!! TTACAATAAAGAGCAAGTTT+TGG - chr1_1:38861668-38861687 None:intergenic 25.0%
! TTAGAATTTGGTAGAGTAAA+TGG - chr1_1:38861766-38861785 None:intergenic 25.0%
!!! AGTTGATCAACTTTAGAATT+TGG - chr1_1:38861778-38861797 None:intergenic 25.0%
!!! TTTTGAGTTACCATAGTAAT+TGG - chr1_1:38861854-38861873 None:intergenic 25.0%
! TTCTTGAAAAGCTGAAAAAA+AGG - chr1_1:38862333-38862352 None:intergenic 25.0%
! AAGAAATTCTGCAAATTATC+AGG - chr1_1:38862501-38862520 None:intergenic 25.0%
! AATTTCTTGAAGATGATTTC+TGG + chr1_1:38862513-38862532 Msa0021570:CDS 25.0%
! CCATTATCTAAAAACAAAAC+AGG - chr1_1:38862585-38862604 None:intergenic 25.0%
!!! CCTGTTTTGTTTTTAGATAA+TGG + chr1_1:38862582-38862601 Msa0021570:CDS 25.0%
!!! ATGTCAAAGAGTATTTGAAT+TGG + chr1_1:38862640-38862659 Msa0021570:CDS 25.0%
!!! AAAGAGTATTTGAATTGGTA+TGG + chr1_1:38862645-38862664 Msa0021570:CDS 25.0%
! ACAAATGGTTTCTTAGTAAT+AGG - chr1_1:38862876-38862895 None:intergenic 25.0%
! TTAATAGGGTATAAGGTAAA+AGG - chr1_1:38863212-38863231 None:intergenic 25.0%
!! TTTTACCTTATACCCTATTA+AGG + chr1_1:38863211-38863230 Msa0021570:intron 25.0%
!! TTAAGTTGTTTATGTGAACA+AGG + chr1_1:38863515-38863534 Msa0021570:intron 25.0%
! TAAGTTGTTTATGTGAACAA+GGG + chr1_1:38863516-38863535 Msa0021570:intron 25.0%
!! TGAGTTGAAAAGAAAAACAA+AGG + chr1_1:38863682-38863701 Msa0021570:CDS 25.0%
! TGAAGTCATATTATCTCTTA+AGG + chr1_1:38863726-38863745 Msa0021570:intron 25.0%
! ATATTATCTCTTAAGGTTGT+AGG + chr1_1:38863733-38863752 Msa0021570:intron 25.0%
! TATTATCTCTTAAGGTTGTA+GGG + chr1_1:38863734-38863753 Msa0021570:intron 25.0%
!!! ATATTTTGCTGTTCTTAATC+TGG - chr1_1:38864086-38864105 None:intergenic 25.0%
! CATCTTTCATGTAAATTCAT+AGG + chr1_1:38864167-38864186 Msa0021570:intron 25.0%
! TGTTGAAATTATCTTGATAC+AGG + chr1_1:38864348-38864367 Msa0021570:intron 25.0%
!!! TTCTTTTAGAACAGAGAAAA+TGG - chr1_1:38864461-38864480 None:intergenic 25.0%
!! CAATATGGTAATGTATTCAT+AGG + chr1_1:38864718-38864737 Msa0021570:CDS 25.0%
!!! AGAATTTTGTTTGAGTACTT+GGG + chr1_1:38865687-38865706 Msa0021570:CDS 25.0%
! GAAAGGCAAAAAATTGATAA+TGG + chr1_1:38865921-38865940 Msa0021570:CDS 25.0%
!! TTTGTTATAGAGGTTAACTA+TGG - chr1_1:38866247-38866266 None:intergenic 25.0%
! AGAAACTATAATGATTGTTC+TGG + chr1_1:38866292-38866311 Msa0021570:intron 25.0%
! GAAACTATAATGATTGTTCT+GGG + chr1_1:38866293-38866312 Msa0021570:intron 25.0%
! ATGAAAATCTTGGAGTAATA+AGG - chr1_1:38866346-38866365 None:intergenic 25.0%
!! AAATTTTGAACAAGGTTAGT+GGG - chr1_1:38866807-38866826 None:intergenic 25.0%
!! TAAATTTTGAACAAGGTTAG+TGG - chr1_1:38866808-38866827 None:intergenic 25.0%
! CTAACCTTGTTCAAAATTTA+AGG + chr1_1:38866808-38866827 Msa0021570:CDS 25.0%
!! CTTTCCTTAAATTTTGAACA+AGG - chr1_1:38866815-38866834 None:intergenic 25.0%
! GTTCAAAATTTAAGGAAAGA+TGG + chr1_1:38866816-38866835 Msa0021570:CDS 25.0%
! GAAAGATCAAAATCCTAATA+AGG - chr1_1:38867108-38867127 None:intergenic 25.0%
! AAAATTACAACAGGGAAAAA+GGG - chr1_1:38867741-38867760 None:intergenic 25.0%
! AAAAATTACAACAGGGAAAA+AGG - chr1_1:38867742-38867761 None:intergenic 25.0%
! AGTCAACAAAAATTACAACA+GGG - chr1_1:38867749-38867768 None:intergenic 25.0%
! AAGTCAACAAAAATTACAAC+AGG - chr1_1:38867750-38867769 None:intergenic 25.0%
!!! TGTAATTTTTGTTGACTTTC+AGG + chr1_1:38867752-38867771 Msa0021570:three_prime_UTR 25.0%
!!! GTAATTTTTGTTGACTTTCA+GGG + chr1_1:38867753-38867772 Msa0021570:three_prime_UTR 25.0%
! TGTGGAGTTGAGTTTTTATT+TGG - chr1_1:38861500-38861519 None:intergenic 30.0%
TTTCTTCTTGTTCTTCTATG+TGG - chr1_1:38861518-38861537 None:intergenic 30.0%
!! AAATTTGGGTTGATGATCAA+TGG + chr1_1:38861723-38861742 Msa0021570:exon 30.0%
!!! AGTAATTGGTTTTCTTAGGA+AGG - chr1_1:38861840-38861859 None:intergenic 30.0%
!!! CCATAGTAATTGGTTTTCTT+AGG - chr1_1:38861844-38861863 None:intergenic 30.0%
CCTAAGAAAACCAATTACTA+TGG + chr1_1:38861841-38861860 Msa0021570:CDS 30.0%
TGCATTGCATTTCAATCTAA+AGG - chr1_1:38861881-38861900 None:intergenic 30.0%
AGATTGAAATGCAATGCAAT+TGG + chr1_1:38861883-38861902 Msa0021570:CDS 30.0%
AAATGCAATGCAATTGGTAA+TGG + chr1_1:38861889-38861908 Msa0021570:CDS 30.0%
! ACATACACAATTTTCACTGT+TGG - chr1_1:38861976-38861995 None:intergenic 30.0%
GAAGATGCTAATATCTTCAT+TGG + chr1_1:38862144-38862163 Msa0021570:CDS 30.0%
!!! TGGTTCATTGATTTTTGTTG+AGG + chr1_1:38862164-38862183 Msa0021570:CDS 30.0%
! TCTTTTAGTATGTCACAACT+TGG + chr1_1:38862294-38862313 Msa0021570:CDS 30.0%
GGTAAATACTTCAAAACCTT+AGG - chr1_1:38862414-38862433 None:intergenic 30.0%
! ATATCTTGAGTCTACAGTTT+TGG + chr1_1:38862463-38862482 Msa0021570:CDS 30.0%
TTGACATCATCATACATACA+AGG - chr1_1:38862627-38862646 None:intergenic 30.0%
GATATCACAGAATTCACAAA+TGG - chr1_1:38862891-38862910 None:intergenic 30.0%
!! GTGATTGTTTTACCTGTTTT+GGG - chr1_1:38863146-38863165 None:intergenic 30.0%
!! AGTGATTGTTTTACCTGTTT+TGG - chr1_1:38863147-38863166 None:intergenic 30.0%
ACAATCCTTAATAGGGTATA+AGG - chr1_1:38863219-38863238 None:intergenic 30.0%
!!! GTTGCTTTTGTAAGTTATTC+AGG - chr1_1:38863385-38863404 None:intergenic 30.0%
TTGAAGCAGATATCTGATAT+TGG + chr1_1:38863774-38863793 Msa0021570:intron 30.0%
TGATACTACAAGTAATCTCT+AGG + chr1_1:38863878-38863897 Msa0021570:intron 30.0%
TTCCAATGTAGTAAAACCTT+AGG + chr1_1:38864264-38864283 Msa0021570:intron 30.0%
TCCAATGTAGTAAAACCTTA+GGG + chr1_1:38864265-38864284 Msa0021570:intron 30.0%
!!! TTTTAGAACAGAGAAAATGG+AGG - chr1_1:38864458-38864477 None:intergenic 30.0%
CTAAAAGAACTTCAAAGTGA+TGG + chr1_1:38864472-38864491 Msa0021570:CDS 30.0%
TGTAAGCAATGTTGAGATTT+GGG - chr1_1:38864579-38864598 None:intergenic 30.0%
TTGTAAGCAATGTTGAGATT+TGG - chr1_1:38864580-38864599 None:intergenic 30.0%
CACAGCATTAGAAGAAAATT+GGG + chr1_1:38864639-38864658 Msa0021570:CDS 30.0%
ACAGCATTAGAAGAAAATTG+GGG + chr1_1:38864640-38864659 Msa0021570:CDS 30.0%
TTGGTATATGGTAAGCAATA+TGG + chr1_1:38864703-38864722 Msa0021570:CDS 30.0%
TGTGAGTTCAATTATTAGCA+CGG + chr1_1:38865155-38865174 Msa0021570:CDS 30.0%
ATTTATAGAAGCAGTGACAA+AGG + chr1_1:38865456-38865475 Msa0021570:CDS 30.0%
!! CAGAATTTTGTTTGAGTACT+TGG + chr1_1:38865686-38865705 Msa0021570:CDS 30.0%
! AATTGTAGCTGATAATGAAG+TGG + chr1_1:38865725-38865744 Msa0021570:CDS 30.0%
! ATTGTAGCTGATAATGAAGT+GGG + chr1_1:38865726-38865745 Msa0021570:CDS 30.0%
!! AAAACTTTAGGGTTTCTGAT+CGG - chr1_1:38865807-38865826 None:intergenic 30.0%
! TTCCTGTTGGTAAAACTTTA+GGG - chr1_1:38865818-38865837 None:intergenic 30.0%
! TTTCCTGTTGGTAAAACTTT+AGG - chr1_1:38865819-38865838 None:intergenic 30.0%
!! AGGCAAAAAATTGATAATGG+AGG + chr1_1:38865924-38865943 Msa0021570:CDS 30.0%
CAATAACAGAATCCAAACAA+CGG - chr1_1:38866191-38866210 None:intergenic 30.0%
ACAGACAGATATGAAAATCT+TGG - chr1_1:38866356-38866375 None:intergenic 30.0%
! AAAAAGACAAGTCTTTGAGA+TGG + chr1_1:38866695-38866714 Msa0021570:CDS 30.0%
! AATTTTGAACAAGGTTAGTG+GGG - chr1_1:38866806-38866825 None:intergenic 30.0%
! TCATGTAACAACTTTTACCT+GGG - chr1_1:38866886-38866905 None:intergenic 30.0%
! TTCATGTAACAACTTTTACC+TGG - chr1_1:38866887-38866906 None:intergenic 30.0%
ATTGATTAAAGTGACACTGA+TGG + chr1_1:38866964-38866983 Msa0021570:intron 30.0%
TTGACATTGCAAAACCTAAA+GGG - chr1_1:38867028-38867047 None:intergenic 30.0%
TTTGACATTGCAAAACCTAA+AGG - chr1_1:38867029-38867048 None:intergenic 30.0%
!!! AGTTTTTTCGTTTGACCTTA+TGG + chr1_1:38867188-38867207 Msa0021570:intron 30.0%
AAAGGAACAATATCTCCATA+AGG - chr1_1:38867206-38867225 None:intergenic 30.0%
ATGTTATCTAGTGGTTATGA+GGG + chr1_1:38867301-38867320 Msa0021570:CDS 30.0%
AAGAAAACATTGAGAAGTTG+AGG + chr1_1:38867536-38867555 Msa0021570:CDS 30.0%
GAAGTGGAAGATAAAATTGA+AGG + chr1_1:38867571-38867590 Msa0021570:CDS 30.0%
!! TACCTTATTTCTCTGAAACT+TGG + chr1_1:38867651-38867670 Msa0021570:three_prime_UTR 30.0%
AACCAAGTTTCAGAGAAATA+AGG - chr1_1:38867656-38867675 None:intergenic 30.0%
TACATTAACAATGATGCCAT+TGG - chr1_1:38867702-38867721 None:intergenic 30.0%
AAATTACAACAGGGAAAAAG+GGG - chr1_1:38867740-38867759 None:intergenic 30.0%
! ATATATTGGCCAAGTTTGTT+TGG - chr1_1:38867809-38867828 None:intergenic 30.0%
TATGGTTAGTGGTGAAAGTT+TGG - chr1_1:38861432-38861451 None:intergenic 35.0%
AAAACGGTTTCTATGGTTAG+TGG - chr1_1:38861443-38861462 None:intergenic 35.0%
! ACCATAGAAACCGTTTTCAT+TGG + chr1_1:38861446-38861465 Msa0021570:five_prime_UTR 35.0%
TCCAATGAAAACGGTTTCTA+TGG - chr1_1:38861450-38861469 None:intergenic 35.0%
TGAGAAACACAACTCAACTT+TGG + chr1_1:38861572-38861591 Msa0021570:five_prime_UTR 35.0%
!! TTTTGGTTATGAGGGAAAGA+TGG - chr1_1:38861651-38861670 None:intergenic 35.0%
!!! AGAGCAAGTTTTGGTTATGA+GGG - chr1_1:38861659-38861678 None:intergenic 35.0%
!!! AAGAGCAAGTTTTGGTTATG+AGG - chr1_1:38861660-38861679 None:intergenic 35.0%
!! GGTAAGTTTTGCTTGTTTTC+TGG - chr1_1:38861955-38861974 None:intergenic 35.0%
!!! GATGCTTCTTTTGAAGTTGT+CGG + chr1_1:38862063-38862082 Msa0021570:CDS 35.0%
GTGATGAGGTTGAACAAATT+GGG + chr1_1:38862270-38862289 Msa0021570:CDS 35.0%
AAGAAGAATACTTCTTCAGC+TGG + chr1_1:38862351-38862370 Msa0021570:CDS 35.0%
! TCTTATGTTCCAGCATTGAA+AGG + chr1_1:38862537-38862556 Msa0021570:CDS 35.0%
ATCTTTGTACCTTTCAATGC+TGG - chr1_1:38862549-38862568 None:intergenic 35.0%
! AGCATTGAAAGGTACAAAGA+TGG + chr1_1:38862548-38862567 Msa0021570:CDS 35.0%
! CATACATACAAGGTGCTAAA+GGG - chr1_1:38862617-38862636 None:intergenic 35.0%
! TCATACATACAAGGTGCTAA+AGG - chr1_1:38862618-38862637 None:intergenic 35.0%
TGAATTGGTATGGAACTAGA+AGG + chr1_1:38862655-38862674 Msa0021570:CDS 35.0%
GAATTGGTATGGAACTAGAA+GGG + chr1_1:38862656-38862675 Msa0021570:CDS 35.0%
!!! TTGTTGGTTTGGTTTTGCAA+AGG + chr1_1:38862715-38862734 Msa0021570:CDS 35.0%
CAAAGGAGTCATATTGTTAC+TGG + chr1_1:38862732-38862751 Msa0021570:CDS 35.0%
! CATATTGTTACTGGTGATGA+TGG + chr1_1:38862741-38862760 Msa0021570:CDS 35.0%
TCATTACGTTGCTGTGATTA+TGG + chr1_1:38862764-38862783 Msa0021570:CDS 35.0%
ATTATGGAACTTGAGGCTAA+AGG + chr1_1:38862780-38862799 Msa0021570:CDS 35.0%
! AAGGTTATTCCAATTTTCGC+CGG + chr1_1:38862807-38862826 Msa0021570:CDS 35.0%
TCAATGAAGAACTTCTCAAC+CGG - chr1_1:38862852-38862871 None:intergenic 35.0%
AATTCTGTGATATCTCTCAC+TGG + chr1_1:38862897-38862916 Msa0021570:CDS 35.0%
AGTGGCAAAGCAACAATATA+AGG - chr1_1:38862996-38863015 None:intergenic 35.0%
!! TTATATTGTTGCTTTGCCAC+TGG + chr1_1:38862995-38863014 Msa0021570:CDS 35.0%
AGAGTGGTTGAATAGTACTT+TGG + chr1_1:38863034-38863053 Msa0021570:CDS 35.0%
GAGTGGTTGAATAGTACTTT+GGG + chr1_1:38863035-38863054 Msa0021570:CDS 35.0%
ACTTGAAGAGCAACTTGAAT+TGG - chr1_1:38863068-38863087 None:intergenic 35.0%
TGCAAGGACAATCCTTAATA+GGG - chr1_1:38863226-38863245 None:intergenic 35.0%
TTGCAAGGACAATCCTTAAT+AGG - chr1_1:38863227-38863246 None:intergenic 35.0%
TTGTCCTTGCAAATACTCTT+AGG + chr1_1:38863235-38863254 Msa0021570:intron 35.0%
TGTCCTTGCAAATACTCTTA+GGG + chr1_1:38863236-38863255 Msa0021570:intron 35.0%
!!! TAACACTTCTGAGACTGTTT+TGG + chr1_1:38863295-38863314 Msa0021570:intron 35.0%
TGACTTCAAGAAGCGAAATA+TGG - chr1_1:38863714-38863733 None:intergenic 35.0%
TACTACAAGTAATCTCTAGG+TGG + chr1_1:38863881-38863900 Msa0021570:intron 35.0%
!! GATATTGACTTTGAGCTGAA+TGG + chr1_1:38863985-38864004 Msa0021570:intron 35.0%
TAATCTGGACAAAAGAAACG+AGG - chr1_1:38864071-38864090 None:intergenic 35.0%
ATTGGAAAAACATGTAGTGC+AGG - chr1_1:38864251-38864270 None:intergenic 35.0%
! ACCCTAAGGTTTTACTACAT+TGG - chr1_1:38864269-38864288 None:intergenic 35.0%
AAATGGAGGAGAAAACGTTT+AGG - chr1_1:38864444-38864463 None:intergenic 35.0%
AGTGATGGTTACAATGTTGA+AGG + chr1_1:38864487-38864506 Msa0021570:CDS 35.0%
!! AATCAATGCTTCTGAAGTCT+CGG - chr1_1:38864518-38864537 None:intergenic 35.0%
! CCAATTTTCTTCTAATGCTG+TGG - chr1_1:38864641-38864660 None:intergenic 35.0%
CCACAGCATTAGAAGAAAAT+TGG + chr1_1:38864638-38864657 Msa0021570:CDS 35.0%
ATAGGTGTTCAACCTACATT+TGG + chr1_1:38864736-38864755 Msa0021570:CDS 35.0%
GCAGCATAGTAATAGACATT+TGG - chr1_1:38864967-38864986 None:intergenic 35.0%
TAAACAATGCAATCTCGACA+AGG + chr1_1:38865179-38865198 Msa0021570:CDS 35.0%
GAGTGTAGGAAAAAACATAG+AGG + chr1_1:38865431-38865450 Msa0021570:CDS 35.0%
!! CAGTGACAAAGGAGTATTAA+AGG + chr1_1:38865467-38865486 Msa0021570:CDS 35.0%
TAAAGGATGTAGAGCTTCTT+CGG + chr1_1:38865484-38865503 Msa0021570:CDS 35.0%
AATAAACTTACCTCCATCCT+TGG + chr1_1:38865591-38865610 Msa0021570:CDS 35.0%
! CAAATTTTACCGAGGTGATA+GGG + chr1_1:38865656-38865675 Msa0021570:CDS 35.0%
! AGTTTAAAACAAGCCTTGGA+AGG + chr1_1:38865750-38865769 Msa0021570:CDS 35.0%
CTCTACAAATTTACCTTCCA+AGG - chr1_1:38865766-38865785 None:intergenic 35.0%
!! AAACTTTAGGGTTTCTGATC+GGG - chr1_1:38865806-38865825 None:intergenic 35.0%
! AACCCTAAAGTTTTACCAAC+AGG + chr1_1:38865813-38865832 Msa0021570:CDS 35.0%
GCATGAATATTCTTTCCTGT+TGG - chr1_1:38865831-38865850 None:intergenic 35.0%
! CAATCTCTCTACCACTATTT+TGG - chr1_1:38865898-38865917 None:intergenic 35.0%
CTGATACCTGATTGATGAAA+AGG - chr1_1:38866160-38866179 None:intergenic 35.0%
TCTTCTTCAGATGAATCTTC+TGG + chr1_1:38866401-38866420 Msa0021570:intron 35.0%
AAGCAAAAGACTTTCTGCTA+AGG - chr1_1:38866641-38866660 None:intergenic 35.0%
TTTCCAAAACCTTGACTCAT+CGG + chr1_1:38866740-38866759 Msa0021570:CDS 35.0%
GTATCAGCAATATATGCACT+TGG - chr1_1:38866849-38866868 None:intergenic 35.0%
GATTTGAATTTCACCCCTTT+AGG + chr1_1:38867011-38867030 Msa0021570:intron 35.0%
TGACATTGCAAAACCTAAAG+GGG - chr1_1:38867027-38867046 None:intergenic 35.0%
ACACAAGTGACATCCTTATT+AGG + chr1_1:38867092-38867111 Msa0021570:intron 35.0%
ATGGAGATATTGTTCCTTTC+AGG + chr1_1:38867207-38867226 Msa0021570:intron 35.0%
AACATGCCTTCATACCATTT+GGG - chr1_1:38867286-38867305 None:intergenic 35.0%
TAACATGCCTTCATACCATT+TGG - chr1_1:38867287-38867306 None:intergenic 35.0%
! TATGAAGGCATGTTATCTAG+TGG + chr1_1:38867292-38867311 Msa0021570:CDS 35.0%
CATGTTATCTAGTGGTTATG+AGG + chr1_1:38867300-38867319 Msa0021570:CDS 35.0%
! TTCTGGACAAGTTGACAATT+GGG + chr1_1:38867375-38867394 Msa0021570:CDS 35.0%
GTCTTGAATGAATGTTGTGT+TGG - chr1_1:38867413-38867432 None:intergenic 35.0%
TTGCAAATGCCAAACAAACT+TGG + chr1_1:38867797-38867816 Msa0021570:three_prime_UTR 35.0%
ACGTGGCAAAATGTAGTCAT+TGG - chr1_1:38861406-38861425 None:intergenic 40.0%
! AATGACTACATTTTGCCACG+TGG + chr1_1:38861405-38861424 Msa0021570:five_prime_UTR 40.0%
! ATGACTACATTTTGCCACGT+GGG + chr1_1:38861406-38861425 Msa0021570:five_prime_UTR 40.0%
TGAGGGAAAGATGGTATTTG+AGG - chr1_1:38861642-38861661 None:intergenic 40.0%
AACGTACGAAACATTCTGCA+AGG + chr1_1:38862116-38862135 Msa0021570:CDS 40.0%
AAGCTGCTGTTGAGAAAGAA+AGG + chr1_1:38862205-38862224 Msa0021570:CDS 40.0%
AGCTGCTGTTGAGAAAGAAA+GGG + chr1_1:38862206-38862225 Msa0021570:CDS 40.0%
GGTGATGAGGTTGAACAAAT+TGG + chr1_1:38862269-38862288 Msa0021570:CDS 40.0%
ATAGCATGTTGAAGCTTGTG+AGG + chr1_1:38862382-38862401 Msa0021570:CDS 40.0%
! GCATCTTGAGCTTTATCACT+TGG - chr1_1:38862435-38862454 None:intergenic 40.0%
GTGATAAAGCTCAAGATGCT+AGG + chr1_1:38862436-38862455 Msa0021570:CDS 40.0%
!!! TTGAGTCTACAGTTTTGGCT+TGG + chr1_1:38862468-38862487 Msa0021570:CDS 40.0%
AGTTCAAATGCACCTGTTGT+TGG + chr1_1:38862699-38862718 Msa0021570:CDS 40.0%
! AAATGCACCTGTTGTTGGTT+TGG + chr1_1:38862704-38862723 Msa0021570:CDS 40.0%
TGCAAAACCAAACCAACAAC+AGG - chr1_1:38862714-38862733 None:intergenic 40.0%
TGCTGTGATTATGGAACTTG+AGG + chr1_1:38862773-38862792 Msa0021570:CDS 40.0%
! TTATTCCAATTTTCGCCGGA+GGG + chr1_1:38862811-38862830 Msa0021570:CDS 40.0%
ATCAAAGCTTCAATAGCCCT+TGG - chr1_1:38862960-38862979 None:intergenic 40.0%
! TTTTCCAGACAACTGAAGAG+TGG + chr1_1:38863018-38863037 Msa0021570:CDS 40.0%
!! AGACCCTAAGAGTATTTGCA+AGG - chr1_1:38863242-38863261 None:intergenic 40.0%
GAACGAAGAGGAGAGAAAAA+AGG - chr1_1:38863557-38863576 None:intergenic 40.0%
GTTCCTACATTTCCTTTGTC+TGG - chr1_1:38864412-38864431 None:intergenic 40.0%
!! ATCAATGCTTCTGAAGTCTC+GGG - chr1_1:38864517-38864536 None:intergenic 40.0%
TCTTCTAATGCTGTGGCATA+GGG - chr1_1:38864634-38864653 None:intergenic 40.0%
TTCTTCTAATGCTGTGGCAT+AGG - chr1_1:38864635-38864654 None:intergenic 40.0%
GGAGAGAATCTGTTGGTATA+TGG + chr1_1:38864691-38864710 Msa0021570:CDS 40.0%
TTGGAGAAAAGTAACCGCAT+AGG - chr1_1:38864775-38864794 None:intergenic 40.0%
ATGCTGCAAAACCATGATGA+GGG - chr1_1:38864807-38864826 None:intergenic 40.0%
TATGCTGCAAAACCATGATG+AGG - chr1_1:38864808-38864827 None:intergenic 40.0%
GCTGATGCTGTTCTTCATTT+CGG + chr1_1:38864856-38864875 Msa0021570:CDS 40.0%
CTTTCCAGGCATGAATTCAA+GGG - chr1_1:38864893-38864912 None:intergenic 40.0%
AATATTCCCGATCAGACTGT+CGG - chr1_1:38864944-38864963 None:intergenic 40.0%
TGGAGGAGTAAGATAGCTTA+TGG - chr1_1:38865040-38865059 None:intergenic 40.0%
! CTTGTACAGTCCTGCATTTT+CGG - chr1_1:38865064-38865083 None:intergenic 40.0%
GAAAATGCAGGACTGTACAA+GGG + chr1_1:38865063-38865082 Msa0021570:CDS 40.0%
!! AACTCACAATTTGTTGACCG+CGG - chr1_1:38865143-38865162 None:intergenic 40.0%
ACAAGATCTCGCTCTTTAGT+GGG - chr1_1:38865237-38865256 None:intergenic 40.0%
AACAAGATCTCGCTCTTTAG+TGG - chr1_1:38865238-38865257 None:intergenic 40.0%
! AAAGAGCGAGATCTTGTTGT+TGG + chr1_1:38865240-38865259 Msa0021570:CDS 40.0%
!! AAGAGCGAGATCTTGTTGTT+GGG + chr1_1:38865241-38865260 Msa0021570:CDS 40.0%
! GAAGGTGTATGCTAAGATCA+TGG + chr1_1:38865263-38865282 Msa0021570:CDS 40.0%
CACTCTGAGCTAGTATAGAA+GGG - chr1_1:38865416-38865435 None:intergenic 40.0%
ACACTCTGAGCTAGTATAGA+AGG - chr1_1:38865417-38865436 None:intergenic 40.0%
TCTATACTAGCTCAGAGTGT+AGG + chr1_1:38865417-38865436 Msa0021570:CDS 40.0%
ATTAGTAGTGCGCTCTACAA+AGG - chr1_1:38865544-38865563 None:intergenic 40.0%
AGAGCGCACTACTAATAGTA+AGG + chr1_1:38865548-38865567 Msa0021570:CDS 40.0%
GAGCGCACTACTAATAGTAA+GGG + chr1_1:38865549-38865568 Msa0021570:CDS 40.0%
CCTATCACCTCGGTAAAATT+TGG - chr1_1:38865658-38865677 None:intergenic 40.0%
! CCAAATTTTACCGAGGTGAT+AGG + chr1_1:38865655-38865674 Msa0021570:CDS 40.0%
AGTACTTGGGAGAATGTTTG+AGG + chr1_1:38865700-38865719 Msa0021570:CDS 40.0%
! GGGAAGTTTAAAACAAGCCT+TGG + chr1_1:38865746-38865765 Msa0021570:CDS 40.0%
GAAGGTAAATTTGTAGAGCC+AGG + chr1_1:38865768-38865787 Msa0021570:CDS 40.0%
AGGAAAGAATATTCATGCCC+TGG + chr1_1:38865833-38865852 Msa0021570:CDS 40.0%
AGGAATAGATTGTGGATCCA+GGG - chr1_1:38865853-38865872 None:intergenic 40.0%
TAGGAATAGATTGTGGATCC+AGG - chr1_1:38865854-38865873 None:intergenic 40.0%
GCTGTAGTAGGAATAGATTG+TGG - chr1_1:38865861-38865880 None:intergenic 40.0%
TATTCCTACTACAGCAGCAA+TGG + chr1_1:38865866-38865885 Msa0021570:CDS 40.0%
!! AATGGAGAGTGCCAAAATAG+TGG + chr1_1:38865884-38865903 Msa0021570:CDS 40.0%
TGGTAGAGAGATTGCTTGAA+AGG + chr1_1:38865904-38865923 Msa0021570:CDS 40.0%
AATCCGATAGCTGATAACCT+CGG + chr1_1:38866044-38866063 Msa0021570:CDS 40.0%
! CAGAGACCTTTTCATCAATC+AGG + chr1_1:38866151-38866170 Msa0021570:CDS 40.0%
TCAGTTATCACACCGTTGTT+TGG + chr1_1:38866176-38866195 Msa0021570:intron 40.0%
CTTACATAGTTCATCTCTGC+TGG - chr1_1:38866462-38866481 None:intergenic 40.0%
CAGCAGAGATGAACTATGTA+AGG + chr1_1:38866460-38866479 Msa0021570:CDS 40.0%
! CTATGTAAGGAAGCATGCAA+TGG + chr1_1:38866473-38866492 Msa0021570:CDS 40.0%
ATTGGAGAAGATCCTTGTTG+CGG - chr1_1:38866535-38866554 None:intergenic 40.0%
CAGGTTTATGTTTGAGGAGT+AGG - chr1_1:38866568-38866587 None:intergenic 40.0%
CTACTCCTCAAACATAAACC+TGG + chr1_1:38866566-38866585 Msa0021570:CDS 40.0%
TTCTGCTAAGGTACATGTCT+TGG - chr1_1:38866629-38866648 None:intergenic 40.0%
!!! TGAGTCAAGGTTTTGGAAAG+TGG - chr1_1:38866739-38866758 None:intergenic 40.0%
! TTTCCGATGAGTCAAGGTTT+TGG - chr1_1:38866746-38866765 None:intergenic 40.0%
GTAATGACTGACATCAGTGA+GGG - chr1_1:38866772-38866791 None:intergenic 40.0%
AGTAATGACTGACATCAGTG+AGG - chr1_1:38866773-38866792 None:intergenic 40.0%
! AACAACTTTTACCTGGGCAT+TGG - chr1_1:38866880-38866899 None:intergenic 40.0%
! TCATTTTATAACCATCCCCG+AGG + chr1_1:38866987-38867006 Msa0021570:intron 40.0%
GTGAAATTCAAATCTCCTCG+GGG - chr1_1:38867005-38867024 None:intergenic 40.0%
GGTGAAATTCAAATCTCCTC+GGG - chr1_1:38867006-38867025 None:intergenic 40.0%
GGGTGAAATTCAAATCTCCT+CGG - chr1_1:38867007-38867026 None:intergenic 40.0%
! AAGTCGAACTGTCTCTGAAA+GGG - chr1_1:38867239-38867258 None:intergenic 40.0%
TTGAACCCCAAATGGTATGA+AGG + chr1_1:38867277-38867296 Msa0021570:CDS 40.0%
ACATGCCTTCATACCATTTG+GGG - chr1_1:38867285-38867304 None:intergenic 40.0%
AAGAGGCTTACTAACACAGT+TGG + chr1_1:38867340-38867359 Msa0021570:CDS 40.0%
! CTTCTGGACAAGTTGACAAT+TGG + chr1_1:38867374-38867393 Msa0021570:CDS 40.0%
CACAACATTCATTCAAGACG+AGG + chr1_1:38867414-38867433 Msa0021570:CDS 40.0%
CAAACATTCTTGGAAGCCAA+TGG + chr1_1:38867490-38867509 Msa0021570:CDS 40.0%
TTGGCAACAGCATCAATTCA+AGG - chr1_1:38867683-38867702 None:intergenic 40.0%
TGAATTGATGCTGTTGCCAA+TGG + chr1_1:38867683-38867702 Msa0021570:three_prime_UTR 40.0%
GCATTTGCAACTGCACAAAA+AGG - chr1_1:38867787-38867806 None:intergenic 40.0%
! AGTTGTCGGTTACTTAGTCG+AGG + chr1_1:38862077-38862096 Msa0021570:CDS 45.0%
CTGTTGAGAAAGAAAGGGAC+AGG + chr1_1:38862211-38862230 Msa0021570:CDS 45.0%
TGAGAAAGAAAGGGACAGGA+TGG + chr1_1:38862215-38862234 Msa0021570:CDS 45.0%
TTGTTCAACCTCATCACCTC+AGG - chr1_1:38862267-38862286 None:intergenic 45.0%
!!! AGTCTACAGTTTTGGCTTGG+TGG + chr1_1:38862471-38862490 Msa0021570:CDS 45.0%
!!! GTCTACAGTTTTGGCTTGGT+GGG + chr1_1:38862472-38862491 Msa0021570:CDS 45.0%
!! ACTTGAGGCTAAAGGTGCTA+AGG + chr1_1:38862788-38862807 Msa0021570:CDS 45.0%
! GTTATTCCAATTTTCGCCGG+AGG + chr1_1:38862810-38862829 Msa0021570:CDS 45.0%
! CTCACTGGATTTGCTCTTGT+TGG + chr1_1:38862912-38862931 Msa0021570:CDS 45.0%
! ACTGGATTTGCTCTTGTTGG+AGG + chr1_1:38862915-38862934 Msa0021570:CDS 45.0%
! CTGGATTTGCTCTTGTTGGA+GGG + chr1_1:38862916-38862935 Msa0021570:CDS 45.0%
TGCTAGACAGGATCATCCAA+GGG + chr1_1:38862941-38862960 Msa0021570:CDS 45.0%
TCAGTTGTCTGGAAAACCAG+TGG - chr1_1:38863014-38863033 None:intergenic 45.0%
TCAACCACTCTTCAGTTGTC+TGG - chr1_1:38863025-38863044 None:intergenic 45.0%
GCAAGCAAGAATGAACGAAG+AGG - chr1_1:38863569-38863588 None:intergenic 45.0%
AGGTGGTGAACTCTGTTGTT+TGG + chr1_1:38863898-38863917 Msa0021570:intron 45.0%
TTCACATGAAGACGACCCTA+AGG - chr1_1:38864283-38864302 None:intergenic 45.0%
CTACATTTCCTTTGTCTGGC+GGG - chr1_1:38864408-38864427 None:intergenic 45.0%
CCTACATTTCCTTTGTCTGG+CGG - chr1_1:38864409-38864428 None:intergenic 45.0%
GAAAACGTTTAGGTACGCAG+CGG - chr1_1:38864434-38864453 None:intergenic 45.0%
GAGTGAGAGCTTGGTATTCA+CGG - chr1_1:38864612-38864631 None:intergenic 45.0%
AAAATTGGGGAAAGCCTCCT+GGG + chr1_1:38864653-38864672 Msa0021570:CDS 45.0%
CAACCTACATTTGGCTACGA+AGG + chr1_1:38864745-38864764 Msa0021570:CDS 45.0%
TCACCTTCGTAGCCAAATGT+AGG - chr1_1:38864751-38864770 None:intergenic 45.0%
ATGATGAGGGCTTGCAGATT+TGG - chr1_1:38864794-38864813 None:intergenic 45.0%
AAATCTGCAAGCCCTCATCA+TGG + chr1_1:38864793-38864812 Msa0021570:CDS 45.0%
GTTCTTCATTTCGGCACACA+CGG + chr1_1:38864865-38864884 Msa0021570:CDS 45.0%
GCTTTCCAGGCATGAATTCA+AGG - chr1_1:38864894-38864913 None:intergenic 45.0%
TGAATTCATGCCTGGAAAGC+AGG + chr1_1:38864894-38864913 Msa0021570:CDS 45.0%
TGTTATCCCGACAGTCTGAT+CGG + chr1_1:38864934-38864953 Msa0021570:CDS 45.0%
ATATTCCCGATCAGACTGTC+GGG - chr1_1:38864943-38864962 None:intergenic 45.0%
CGAAAATGCAGGACTGTACA+AGG + chr1_1:38865062-38865081 Msa0021570:CDS 45.0%
TATCAGTCACTCAAGGACAC+TGG + chr1_1:38865117-38865136 Msa0021570:CDS 45.0%
ATGCAATCTCGACAAGGATG+TGG + chr1_1:38865185-38865204 Msa0021570:CDS 45.0%
CTGAGCTAGTATAGAAGGGA+GGG - chr1_1:38865412-38865431 None:intergenic 45.0%
TCTGAGCTAGTATAGAAGGG+AGG - chr1_1:38865413-38865432 None:intergenic 45.0%
! CAAATAACCGAAGCATCACG+CGG + chr1_1:38865507-38865526 Msa0021570:CDS 45.0%
CTTACCTCCATCCTTGGATT+CGG + chr1_1:38865597-38865616 Msa0021570:CDS 45.0%
GTTTATGCCGAATCCAAGGA+TGG - chr1_1:38865607-38865626 None:intergenic 45.0%
GCCATGGATTCAGTACTTGT+CGG + chr1_1:38865629-38865648 Msa0021570:CDS 45.0%
!! TCCGACAAGTACTGAATCCA+TGG - chr1_1:38865633-38865652 None:intergenic 45.0%
! TCGGACACCAAATTTTACCG+AGG + chr1_1:38865648-38865667 Msa0021570:CDS 45.0%
! TGAGCTTTTCCCTATCACCT+CGG - chr1_1:38865668-38865687 None:intergenic 45.0%
AAATTTGTAGAGCCAGGACC+TGG + chr1_1:38865774-38865793 Msa0021570:CDS 45.0%
ATCTGTTCCCCACAGTACAA+GGG - chr1_1:38865970-38865989 None:intergenic 45.0%
TATCTGTTCCCCACAGTACA+AGG - chr1_1:38865971-38865990 None:intergenic 45.0%
ATATGGAGAATCCCTTGCTC+AGG + chr1_1:38866001-38866020 Msa0021570:CDS 45.0%
CTTCCGAGGTTATCAGCTAT+CGG - chr1_1:38866050-38866069 None:intergenic 45.0%
GATAGCTGATAACCTCGGAA+GGG + chr1_1:38866049-38866068 Msa0021570:CDS 45.0%
CAAGGCTTACAGGTTCTACA+CGG - chr1_1:38866079-38866098 None:intergenic 45.0%
TAGGTCTTCCAAGCTCTTCA+AGG - chr1_1:38866097-38866116 None:intergenic 45.0%
TTGAAGAGCTTGGAAGACCT+AGG + chr1_1:38866096-38866115 Msa0021570:CDS 45.0%
TGAAGAGCTTGGAAGACCTA+GGG + chr1_1:38866097-38866116 Msa0021570:CDS 45.0%
TCTGGATAGAGCAGTGAAGA+TGG + chr1_1:38866419-38866438 Msa0021570:CDS 45.0%
!! CTCTGCTGGTTCGTCTAATT+CGG - chr1_1:38866448-38866467 None:intergenic 45.0%
TTCTCGAACTTCAACCCCTA+GGG - chr1_1:38866511-38866530 None:intergenic 45.0%
CACAGCCAGGTTTATGTTTG+AGG - chr1_1:38866574-38866593 None:intergenic 45.0%
CTCAAACATAAACCTGGCTG+TGG + chr1_1:38866572-38866591 Msa0021570:CDS 45.0%
ATGAAGAATTCTCCACAGCC+AGG - chr1_1:38866587-38866606 None:intergenic 45.0%
TGGCTGTGGAGAATTCTTCA+TGG + chr1_1:38866586-38866605 Msa0021570:CDS 45.0%
!! GCTTTTGATTGTGATGCTCC+TGG + chr1_1:38866657-38866676 Msa0021570:CDS 45.0%
AATTCAAATCTCCTCGGGGA+TGG - chr1_1:38867001-38867020 None:intergenic 45.0%
CCAGAACACAGAGTCTATGT+AGG - chr1_1:38867153-38867172 None:intergenic 45.0%
CCTACATAGACTCTGTGTTC+TGG + chr1_1:38867150-38867169 Msa0021570:intron 45.0%
CAAGTCGAACTGTCTCTGAA+AGG - chr1_1:38867240-38867259 None:intergenic 45.0%
!! CTAGTGGTTATGAGGGTGTT+CGG + chr1_1:38867308-38867327 Msa0021570:CDS 45.0%
!! TAGTGGTTATGAGGGTGTTC+GGG + chr1_1:38867309-38867328 Msa0021570:CDS 45.0%
GGCTTACTAACACAGTTGGA+TGG + chr1_1:38867344-38867363 Msa0021570:CDS 45.0%
GAAGCTGGTGCAAACATTCT+TGG + chr1_1:38867480-38867499 Msa0021570:CDS 45.0%
GCAACAGCATCAATTCAAGG+TGG - chr1_1:38867680-38867699 None:intergenic 45.0%
ACAACAGGGAAAAAGGGGAA+AGG - chr1_1:38867735-38867754 None:intergenic 45.0%
CAGCTGCTGAGACTGATGAT+TGG - chr1_1:38862017-38862036 None:intergenic 50.0%
! GGACAGGATGGATGCAGTTT+TGG + chr1_1:38862227-38862246 Msa0021570:CDS 50.0%
GGTGTTTCCATCAATGCCTG+AGG + chr1_1:38862248-38862267 Msa0021570:CDS 50.0%
!! CTCATCACCTCAGGCATTGA+TGG - chr1_1:38862258-38862277 None:intergenic 50.0%
CATCAATGCCTGAGGTGATG+AGG + chr1_1:38862256-38862275 Msa0021570:CDS 50.0%
GCTTGTGAGGACTTTGCCTA+AGG + chr1_1:38862395-38862414 Msa0021570:CDS 50.0%
CTTGGATGATCCTGTCTAGC+AGG - chr1_1:38862942-38862961 None:intergenic 50.0%
CTGCTAGACAGGATCATCCA+AGG + chr1_1:38862940-38862959 Msa0021570:CDS 50.0%
GTTGCATTGCCAGAGCTAGA+TGG + chr1_1:38863086-38863105 Msa0021570:CDS 50.0%
! TCCATTCCTCCATCTAGCTC+TGG - chr1_1:38863098-38863117 None:intergenic 50.0%
! ATGGAGCCGATAGTTTTCGC+TGG + chr1_1:38863113-38863132 Msa0021570:CDS 50.0%
! AGCCGATAGTTTTCGCTGGT+CGG + chr1_1:38863117-38863136 Msa0021570:CDS 50.0%
TCCCGACCAGCGAAAACTAT+CGG - chr1_1:38863122-38863141 None:intergenic 50.0%
TCACGCTCTTCACAAGAGAG+TGG + chr1_1:38863628-38863647 Msa0021570:CDS 50.0%
TTTGCACCAGGGCAATCAGA+TGG + chr1_1:38863657-38863676 Msa0021570:CDS 50.0%
TTGCACCAGGGCAATCAGAT+GGG + chr1_1:38863658-38863677 Msa0021570:CDS 50.0%
TTCAGTTTCCCGCCAGACAA+AGG + chr1_1:38864397-38864416 Msa0021570:CDS 50.0%
CCGCCAGACAAAGGAAATGT+AGG + chr1_1:38864406-38864425 Msa0021570:CDS 50.0%
GAAAATTGGGGAAAGCCTCC+TGG + chr1_1:38864652-38864671 Msa0021570:CDS 50.0%
TGCGGATGGAGAGAATCTGT+TGG + chr1_1:38864684-38864703 Msa0021570:CDS 50.0%
GCTACGAAGGTGATCCTATG+CGG + chr1_1:38864758-38864777 Msa0021570:CDS 50.0%
GGTTCCCTTGAATTCATGCC+TGG + chr1_1:38864886-38864905 Msa0021570:CDS 50.0%
TTCATGCCTGGAAAGCAGGT+AGG + chr1_1:38864898-38864917 Msa0021570:CDS 50.0%
TCATGCCTGGAAAGCAGGTA+GGG + chr1_1:38864899-38864918 Msa0021570:CDS 50.0%
GTTATCCCGACAGTCTGATC+GGG + chr1_1:38864935-38864954 Msa0021570:CDS 50.0%
TGCTGCAAACAACCCTTCAG+AGG + chr1_1:38864981-38865000 Msa0021570:CDS 50.0%
TGGCTATGGTAGCCTCTGAA+GGG - chr1_1:38864996-38865015 None:intergenic 50.0%
TTGGCTATGGTAGCCTCTGA+AGG - chr1_1:38864997-38865016 None:intergenic 50.0%
ATTTGCGTAGCTCCTGCGTT+TGG - chr1_1:38865016-38865035 None:intergenic 50.0%
! TACAGTCCTGCATTTTCGGC+TGG - chr1_1:38865060-38865079 None:intergenic 50.0%
CTCGTCGTATCAGTCACTCA+AGG + chr1_1:38865110-38865129 Msa0021570:CDS 50.0%
CAAGGATGTGGATTTGCCAG+AGG + chr1_1:38865197-38865216 Msa0021570:CDS 50.0%
GATGTGGATTTGCCAGAGGA+GGG + chr1_1:38865201-38865220 Msa0021570:CDS 50.0%
!! GCGAGATCTTGTTGTTGGGA+AGG + chr1_1:38865245-38865264 Msa0021570:CDS 50.0%
CCAATGACATGGAGTCCACA+AGG - chr1_1:38865309-38865328 None:intergenic 50.0%
CCTTGTGGACTCCATGTCAT+TGG + chr1_1:38865306-38865325 Msa0021570:CDS 50.0%
CATAGCTGCACTTGATCGTG+TGG + chr1_1:38865371-38865390 Msa0021570:CDS 50.0%
GCACTTGATCGTGTGGAAGA+AGG + chr1_1:38865378-38865397 Msa0021570:CDS 50.0%
AGCTAGTATAGAAGGGAGGG+AGG - chr1_1:38865409-38865428 None:intergenic 50.0%
AATTGCTCCGCGTGATGCTT+CGG - chr1_1:38865517-38865536 None:intergenic 50.0%
TATGCCGAATCCAAGGATGG+AGG - chr1_1:38865604-38865623 None:intergenic 50.0%
GCTCGTTTATGCCGAATCCA+AGG - chr1_1:38865611-38865630 None:intergenic 50.0%
GATTCGGCATAAACGAGCCA+TGG + chr1_1:38865613-38865632 Msa0021570:CDS 50.0%
CTCTCCATTGCTGCTGTAGT+AGG - chr1_1:38865873-38865892 None:intergenic 50.0%
AGTACAAGGGCAACTGTCTC+AGG - chr1_1:38865957-38865976 None:intergenic 50.0%
AGACAGTTGCCCTTGTACTG+TGG + chr1_1:38865958-38865977 Msa0021570:CDS 50.0%
GACAGTTGCCCTTGTACTGT+GGG + chr1_1:38865959-38865978 Msa0021570:CDS 50.0%
ACAGTTGCCCTTGTACTGTG+GGG + chr1_1:38865960-38865979 Msa0021570:CDS 50.0%
AATCCCTTGCTCAGGTTCTG+TGG + chr1_1:38866009-38866028 Msa0021570:CDS 50.0%
CATCCACAGAACCTGAGCAA+GGG - chr1_1:38866015-38866034 None:intergenic 50.0%
TCATCCACAGAACCTGAGCA+AGG - chr1_1:38866016-38866035 None:intergenic 50.0%
GCTCAGGTTCTGTGGATGAT+TGG + chr1_1:38866017-38866036 Msa0021570:CDS 50.0%
CGATAGCTGATAACCTCGGA+AGG + chr1_1:38866048-38866067 Msa0021570:CDS 50.0%
CCAAGCTCTTCAAGGCTTAC+AGG - chr1_1:38866089-38866108 None:intergenic 50.0%
CCTGTAAGCCTTGAAGAGCT+TGG + chr1_1:38866086-38866105 Msa0021570:CDS 50.0%
TTAACGACGACGTCAACCCT+AGG - chr1_1:38866116-38866135 None:intergenic 50.0%
GACGTCGTCGTTAATTGCTC+TGG + chr1_1:38866122-38866141 Msa0021570:CDS 50.0%
ATGGAACAAGCTGAAGCCCT+AGG + chr1_1:38866492-38866511 Msa0021570:CDS 50.0%
TGGAACAAGCTGAAGCCCTA+GGG + chr1_1:38866493-38866512 Msa0021570:CDS 50.0%
CTTCTCGAACTTCAACCCCT+AGG - chr1_1:38866512-38866531 None:intergenic 50.0%
AAGTTCGAGAAGCCGCAACA+AGG + chr1_1:38866520-38866539 Msa0021570:CDS 50.0%
AGGATCTTCTCCAATGCCTC+AGG + chr1_1:38866540-38866559 Msa0021570:CDS 50.0%
GTTTGAGGAGTAGGATCCTG+AGG - chr1_1:38866559-38866578 None:intergenic 50.0%
! TTTTCAGTCATGCCTGCACC+AGG - chr1_1:38866678-38866697 None:intergenic 50.0%
GGGAGATTTCCGATGAGTCA+AGG - chr1_1:38866752-38866771 None:intergenic 50.0%
!!! TTTTACCTGGGCATTGGCAG+TGG - chr1_1:38866874-38866893 None:intergenic 50.0%
! TGAAAGGGTGCGTACCTGAA+AGG - chr1_1:38867224-38867243 None:intergenic 50.0%
! CCATTTGGGGTTCAACAGCT+TGG - chr1_1:38867272-38867291 None:intergenic 50.0%
CCAAGCTGTTGAACCCCAAA+TGG + chr1_1:38867269-38867288 Msa0021570:CDS 50.0%
GTGTTCGGGAAATCGAGAAG+AGG + chr1_1:38867323-38867342 Msa0021570:CDS 50.0%
GTTGGATGGAGTGCAACTTC+TGG + chr1_1:38867358-38867377 Msa0021570:CDS 50.0%
GCACAAATCCCAACTCCTTC+AGG + chr1_1:38867458-38867477 Msa0021570:CDS 50.0%
ACCAGCTTCCTGAAGGAGTT+GGG - chr1_1:38867469-38867488 None:intergenic 50.0%
TGTTTGCACCAGCTTCCTGA+AGG - chr1_1:38867476-38867495 None:intergenic 50.0%
TTCTTGGAAGCCAATGGACG+CGG + chr1_1:38867496-38867515 Msa0021570:CDS 50.0%
AAGCCAATGGACGCGGATAT+TGG + chr1_1:38867503-38867522 Msa0021570:CDS 50.0%
AGCCAATGGACGCGGATATT+GGG + chr1_1:38867504-38867523 Msa0021570:CDS 50.0%
TTCCCAATATCCGCGTCCAT+TGG - chr1_1:38867509-38867528 None:intergenic 50.0%
GAGGCAGTTGTACTCAGAAG+TGG + chr1_1:38867555-38867574 Msa0021570:CDS 50.0%
TGGTGAAAGTTTGGCCCACG+TGG - chr1_1:38861423-38861442 None:intergenic 55.0%
TCTAGCCCTCCGGCGAAAAT+TGG - chr1_1:38862819-38862838 None:intergenic 55.0%
! CGCCGGAGGGCTAGATTTTT+CGG + chr1_1:38862824-38862843 Msa0021570:CDS 55.0%
! GCCGGAGGGCTAGATTTTTC+GGG + chr1_1:38862825-38862844 Msa0021570:CDS 55.0%
CCCCGAAAAATCTAGCCCTC+CGG - chr1_1:38862829-38862848 None:intergenic 55.0%
! CCGGAGGGCTAGATTTTTCG+GGG + chr1_1:38862826-38862845 Msa0021570:CDS 55.0%
!!! AGGGCTAGATTTTTCGGGGC+CGG + chr1_1:38862830-38862849 Msa0021570:CDS 55.0%
GCATTGCCAGAGCTAGATGG+AGG + chr1_1:38863089-38863108 Msa0021570:CDS 55.0%
GCCAGAGCTAGATGGAGGAA+TGG + chr1_1:38863094-38863113 Msa0021570:CDS 55.0%
! GCCGATAGTTTTCGCTGGTC+GGG + chr1_1:38863118-38863137 Msa0021570:CDS 55.0%
AGTGGAGCAGCTTTGCACCA+GGG + chr1_1:38863646-38863665 Msa0021570:CDS 55.0%
TGGCATAGGGAGTGAGAGCT+TGG - chr1_1:38864621-38864640 None:intergenic 55.0%
GCCTCCTGGGAATCTGAATG+CGG + chr1_1:38864666-38864685 Msa0021570:CDS 55.0%
TCCGCATTCAGATTCCCAGG+AGG - chr1_1:38864670-38864689 None:intergenic 55.0%
CCATCCGCATTCAGATTCCC+AGG - chr1_1:38864673-38864692 None:intergenic 55.0%
CCTGGGAATCTGAATGCGGA+TGG + chr1_1:38864670-38864689 Msa0021570:CDS 55.0%
CTCATCCCTACCTGCTTTCC+AGG - chr1_1:38864907-38864926 None:intergenic 55.0%
AGGCTACCATAGCCAAACGC+AGG + chr1_1:38865001-38865020 Msa0021570:CDS 55.0%
GTAGCTCCTGCGTTTGGCTA+TGG - chr1_1:38865010-38865029 None:intergenic 55.0%
ACTCCTCCAGCCGAAAATGC+AGG + chr1_1:38865051-38865070 Msa0021570:CDS 55.0%
! AGTCCTGCATTTTCGGCTGG+AGG - chr1_1:38865057-38865076 None:intergenic 55.0%
GGATGTGGATTTGCCAGAGG+AGG + chr1_1:38865200-38865219 Msa0021570:CDS 55.0%
CATGGAGTCCACAAGGCAAC+AGG - chr1_1:38865302-38865321 None:intergenic 55.0%
TGGGTGGCTCACCAATGACA+TGG - chr1_1:38865320-38865339 None:intergenic 55.0%
GCAACTGCTTCCATGGCTGT+GGG - chr1_1:38865339-38865358 None:intergenic 55.0%
TTTGTAGAGCCAGGACCTGG+AGG + chr1_1:38865777-38865796 Msa0021570:CDS 55.0%
GGAACAAGCTGAAGCCCTAG+GGG + chr1_1:38866494-38866513 Msa0021570:CDS 55.0%
GGAGTAGGATCCTGAGGCAT+TGG - chr1_1:38866553-38866572 None:intergenic 55.0%
GATTGTGATGCTCCTGGTGC+AGG + chr1_1:38866663-38866682 Msa0021570:CDS 55.0%
TCCCAACTCCTTCAGGAAGC+TGG + chr1_1:38867465-38867484 Msa0021570:CDS 55.0%
CACCAGCTTCCTGAAGGAGT+TGG - chr1_1:38867470-38867489 None:intergenic 55.0%
TGTTGGAGGGCCTGCTAGAC+AGG + chr1_1:38862929-38862948 Msa0021570:CDS 60.0%
GCTGGTCGGGATCCCAAAAC+AGG + chr1_1:38863131-38863150 Msa0021570:CDS 60.0%
GAGTGGAGCAGCTTTGCACC+AGG + chr1_1:38863645-38863664 Msa0021570:CDS 60.0%
CTCAGCCCATCTGATTGCCC+TGG - chr1_1:38863666-38863685 None:intergenic 60.0%
TCACTCAAGGACACTGGCCG+CGG + chr1_1:38865123-38865142 Msa0021570:CDS 60.0%
GGATTTGCCAGAGGAGGGTG+TGG + chr1_1:38865206-38865225 Msa0021570:CDS 60.0%
GAGTCCACAAGGCAACAGGC+GGG - chr1_1:38865298-38865317 None:intergenic 60.0%
GGAGTCCACAAGGCAACAGG+CGG - chr1_1:38865299-38865318 None:intergenic 60.0%
ACTGCTTCCATGGCTGTGGG+TGG - chr1_1:38865336-38865355 None:intergenic 60.0%
TTTCTGATCGGGTCGCCTCC+AGG - chr1_1:38865795-38865814 None:intergenic 60.0%
CTACACGGTTGACCCTTCCG+AGG - chr1_1:38866064-38866083 None:intergenic 60.0%
TACCACCACTGCCAATGCCC+AGG + chr1_1:38866866-38866885 Msa0021570:CDS 60.0%
!! TACCTGGGCATTGGCAGTGG+TGG - chr1_1:38866871-38866890 None:intergenic 60.0%
GGAAGCTCCACACCCTCCTC+TGG - chr1_1:38865216-38865235 None:intergenic 65.0%
GAGTCCCGCCTGTTGCCTTG+TGG + chr1_1:38865291-38865310 Msa0021570:CDS 65.0%
TGGTGAGCCACCCACAGCCA+TGG + chr1_1:38865326-38865345 Msa0021570:CDS 65.0%
ATCGGGTCGCCTCCAGGTCC+TGG - chr1_1:38865789-38865808 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 38861359 38867867 38861359 ID=Msa0021570;Name=Msa0021570
chr1_1 mRNA 38861359 38867867 38861359 ID=Msa0021570-mRNA-1;Parent=Msa0021570;Name=Msa0021570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=383|1|1|1|1|1|5|261|1383
chr1_1 exon 38861359 38863152 38861359 ID=Msa0021570-mRNA-1:exon:11893;Parent=Msa0021570-mRNA-1
chr1_1 exon 38863621 38863703 38863621 ID=Msa0021570-mRNA-1:exon:11894;Parent=Msa0021570-mRNA-1
chr1_1 exon 38864370 38866172 38864370 ID=Msa0021570-mRNA-1:exon:11895;Parent=Msa0021570-mRNA-1
chr1_1 exon 38866411 38866887 38866411 ID=Msa0021570-mRNA-1:exon:11896;Parent=Msa0021570-mRNA-1
chr1_1 exon 38867229 38867867 38867229 ID=Msa0021570-mRNA-1:exon:11897;Parent=Msa0021570-mRNA-1
chr1_1 five_prime_UTR 38861359 38861741 38861359 ID=Msa0021570-mRNA-1:five_prime_utr;Parent=Msa0021570-mRNA-1
chr1_1 CDS 38861742 38863152 38861742 ID=Msa0021570-mRNA-1:cds;Parent=Msa0021570-mRNA-1
chr1_1 CDS 38863621 38863703 38863621 ID=Msa0021570-mRNA-1:cds;Parent=Msa0021570-mRNA-1
chr1_1 CDS 38864370 38866172 38864370 ID=Msa0021570-mRNA-1:cds;Parent=Msa0021570-mRNA-1
chr1_1 CDS 38866411 38866887 38866411 ID=Msa0021570-mRNA-1:cds;Parent=Msa0021570-mRNA-1
chr1_1 CDS 38867229 38867606 38867229 ID=Msa0021570-mRNA-1:cds;Parent=Msa0021570-mRNA-1
chr1_1 three_prime_UTR 38867607 38867867 38867607 ID=Msa0021570-mRNA-1:three_prime_utr;Parent=Msa0021570-mRNA-1
Gene Sequence

>Msa0021570

ATGGCTTCATTTTTATCAACACCATTTACTCTACCAAATTCTAAAGTTGATCAACTTTCTTCAGTTGCTCAAAGACATCTTTTTCTTCATTCATTCCTTCCTAAGAAAACCAATTACTATGGTAACTCAAAAGCTTCCTTTAGATTGAAATGCAATGCAATTGGTAATGGTTTGTTCACTCAAACAACTCAAGAAGTTCGTAGAATAGTACCAGAAAACAAGCAAAACTTACCAACAGTGAAAATTGTGTATGTTGTTCTTGAAGCTCAGTACCAATCATCAGTCTCAGCAGCTGTTAGAGAACTCAACAGCAATCAGAATGATGCTTCTTTTGAAGTTGTCGGTTACTTAGTCGAGGAGCTTCGCGACAAATCAACGTACGAAACATTCTGCAAGGATTTAGAAGATGCTAATATCTTCATTGGTTCATTGATTTTTGTTGAGGAGCTAGCACTGAAAGTGAAAGCTGCTGTTGAGAAAGAAAGGGACAGGATGGATGCAGTTTTGGTGTTTCCATCAATGCCTGAGGTGATGAGGTTGAACAAATTGGGCTCTTTTAGTATGTCACAACTTGGACAATCTAAAAGTCCTTTTTTTCAGCTTTTCAAGAAGAAGAATACTTCTTCAGCTGGTTTTGCTGATAGCATGTTGAAGCTTGTGAGGACTTTGCCTAAGGTTTTGAAGTATTTACCAAGTGATAAAGCTCAAGATGCTAGGCTTTATATCTTGAGTCTACAGTTTTGGCTTGGTGGGTCACCTGATAATTTGCAGAATTTCTTGAAGATGATTTCTGGTTCTTATGTTCCAGCATTGAAAGGTACAAAGATGGAGTATTCTGATCCTGTTTTGTTTTTAGATAATGGAATTTGGCACCCTTTAGCACCTTGTATGTATGATGATGTCAAAGAGTATTTGAATTGGTATGGAACTAGAAGGGATGCTAATGAGAAACTAAAGAGTTCAAATGCACCTGTTGTTGGTTTGGTTTTGCAAAGGAGTCATATTGTTACTGGTGATGATGGTCATTACGTTGCTGTGATTATGGAACTTGAGGCTAAAGGTGCTAAGGTTATTCCAATTTTCGCCGGAGGGCTAGATTTTTCGGGGCCGGTTGAGAAGTTCTTCATTGATCCTATTACTAAGAAACCATTTGTGAATTCTGTGATATCTCTCACTGGATTTGCTCTTGTTGGAGGGCCTGCTAGACAGGATCATCCAAGGGCTATTGAAGCTTTGATGAAGCTTGATGTTCCTTATATTGTTGCTTTGCCACTGGTTTTCCAGACAACTGAAGAGTGGTTGAATAGTACTTTGGGTTTGCATCCAATTCAAGTTGCTCTTCAAGTTGCATTGCCAGAGCTAGATGGAGGAATGGAGCCGATAGTTTTCGCTGGTCGGGATCCCAAAACAGGAAAATCTCACGCTCTTCACAAGAGAGTGGAGCAGCTTTGCACCAGGGCAATCAGATGGGCTGAGTTGAAAAGAAAAACAAAGGAAGACAAGAAACTAGCAATCACTGTCTTCAGTTTCCCGCCAGACAAAGGAAATGTAGGAACCGCTGCGTACCTAAACGTTTTCTCCTCCATTTTCTCTGTTCTAAAAGAACTTCAAAGTGATGGTTACAATGTTGAAGGTCTTCCCGAGACTTCAGAAGCATTGATTGAAGATATATTACATGACAAAGAAGCACAATTCAGCAGCCCAAATCTCAACATTGCTTACAAAATGAACGTCCGTGAATACCAAGCTCTCACTCCCTATGCCACAGCATTAGAAGAAAATTGGGGAAAGCCTCCTGGGAATCTGAATGCGGATGGAGAGAATCTGTTGGTATATGGTAAGCAATATGGTAATGTATTCATAGGTGTTCAACCTACATTTGGCTACGAAGGTGATCCTATGCGGTTACTTTTCTCCAAATCTGCAAGCCCTCATCATGGTTTTGCAGCATATTACTCTTTTGTCGAGAAAATTTTCAAAGCTGATGCTGTTCTTCATTTCGGCACACACGGTTCCCTTGAATTCATGCCTGGAAAGCAGGTAGGGATGAGTGATGTATGTTATCCCGACAGTCTGATCGGGAATATTCCAAATGTCTATTACTATGCTGCAAACAACCCTTCAGAGGCTACCATAGCCAAACGCAGGAGCTACGCAAATACCATAAGCTATCTTACTCCTCCAGCCGAAAATGCAGGACTGTACAAGGGTCTTAAGCAGTTAAGTGAACTCATCTCGTCGTATCAGTCACTCAAGGACACTGGCCGCGGTCAACAAATTGTGAGTTCAATTATTAGCACGGCTAAACAATGCAATCTCGACAAGGATGTGGATTTGCCAGAGGAGGGTGTGGAGCTTCCCACTAAAGAGCGAGATCTTGTTGTTGGGAAGGTGTATGCTAAGATCATGGAGATTGAGTCCCGCCTGTTGCCTTGTGGACTCCATGTCATTGGTGAGCCACCCACAGCCATGGAAGCAGTTGCTACATTGGTGAACATAGCTGCACTTGATCGTGTGGAAGAAGGTATTTCCTCCCTCCCTTCTATACTAGCTCAGAGTGTAGGAAAAAACATAGAGGAAATTTATAGAAGCAGTGACAAAGGAGTATTAAAGGATGTAGAGCTTCTTCGGCAAATAACCGAAGCATCACGCGGAGCAATTACTTCCTTTGTAGAGCGCACTACTAATAGTAAGGGTCAAGTTGTAGATGTATCTAATAAACTTACCTCCATCCTTGGATTCGGCATAAACGAGCCATGGATTCAGTACTTGTCGGACACCAAATTTTACCGAGGTGATAGGGAAAAGCTCAGAATTTTGTTTGAGTACTTGGGAGAATGTTTGAGGTTAATTGTAGCTGATAATGAAGTGGGAAGTTTAAAACAAGCCTTGGAAGGTAAATTTGTAGAGCCAGGACCTGGAGGCGACCCGATCAGAAACCCTAAAGTTTTACCAACAGGAAAGAATATTCATGCCCTGGATCCACAATCTATTCCTACTACAGCAGCAATGGAGAGTGCCAAAATAGTGGTAGAGAGATTGCTTGAAAGGCAAAAAATTGATAATGGAGGAAAGTATCCTGAGACAGTTGCCCTTGTACTGTGGGGAACAGATAATATTAAGACATATGGAGAATCCCTTGCTCAGGTTCTGTGGATGATTGGTGTAAATCCGATAGCTGATAACCTCGGAAGGGTCAACCGTGTAGAACCTGTAAGCCTTGAAGAGCTTGGAAGACCTAGGGTTGACGTCGTCGTTAATTGCTCTGGAGTATTCAGAGACCTTTTCATCAATCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTTGCCGAATTAGACGAACCAGCAGAGATGAACTATGTAAGGAAGCATGCAATGGAACAAGCTGAAGCCCTAGGGGTTGAAGTTCGAGAAGCCGCAACAAGGATCTTCTCCAATGCCTCAGGATCCTACTCCTCAAACATAAACCTGGCTGTGGAGAATTCTTCATGGAATGATGAGAAGCAGCTCCAAGACATGTACCTTAGCAGAAAGTCTTTTGCTTTTGATTGTGATGCTCCTGGTGCAGGCATGACTGAAAAAAGACAAGTCTTTGAGATGGCTCTCAGCACAGCAGACGCCACTTTCCAAAACCTTGACTCATCGGAAATCTCCCTCACTGATGTCAGTCATTACTTTGATTCAGACCCCACTAACCTTGTTCAAAATTTAAGGAAAGATGGGAAGAAGCCAAGTGCATATATTGCTGATACCACCACTGCCAATGCCCAGGTACGCACCCTTTCAGAGACAGTTCGACTTGATGCAAGAACCAAGCTGTTGAACCCCAAATGGTATGAAGGCATGTTATCTAGTGGTTATGAGGGTGTTCGGGAAATCGAGAAGAGGCTTACTAACACAGTTGGATGGAGTGCAACTTCTGGACAAGTTGACAATTGGGTGTATGAAGAAGCCAACACAACATTCATTCAAGACGAGGAAATGTTGAAGAAGCTGATGAGCACAAATCCCAACTCCTTCAGGAAGCTGGTGCAAACATTCTTGGAAGCCAATGGACGCGGATATTGGGAAACTGAAGAAGAAAACATTGAGAAGTTGAGGCAGTTGTACTCAGAAGTGGAAGATAAAATTGAAGGCATTGATCGCTGA
Protein sequence

>Msa0021570

MASFLSTPFTLPNSKVDQLSSVAQRHLFLHSFLPKKTNYYGNSKASFRLKCNAIGNGLFTQTTQEVRRIVPENKQNLPTVKIVYVVLEAQYQSSVSAAVRELNSNQNDASFEVVGYLVEELRDKSTYETFCKDLEDANIFIGSLIFVEELALKVKAAVEKERDRMDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKNTSSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALKGTKMEYSDPVLFLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSSNAPVVGLVLQRSHIVTGDDGHYVAVIMELEAKGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVISLTGFALVGGPARQDHPRAIEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCTRAIRWAELKRKTKEDKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKELQSDGYNVEGLPETSEALIEDILHDKEAQFSSPNLNIAYKMNVREYQALTPYATALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGQQIVSSIISTAKQCNLDKDVDLPEEGVELPTKERDLVVGKVYAKIMEIESRLLPCGLHVIGEPPTAMEAVATLVNIAALDRVEEGISSLPSILAQSVGKNIEEIYRSSDKGVLKDVELLRQITEASRGAITSFVERTTNSKGQVVDVSNKLTSILGFGINEPWIQYLSDTKFYRGDREKLRILFEYLGECLRLIVADNEVGSLKQALEGKFVEPGPGGDPIRNPKVLPTGKNIHALDPQSIPTTAAMESAKIVVERLLERQKIDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVNPIADNLGRVNRVEPVSLEELGRPRVDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEMNYVRKHAMEQAEALGVEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRQVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKKLMSTNPNSFRKLVQTFLEANGRGYWETEEENIEKLRQLYSEVEDKIEGIDR*