AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258250 MtrunA17_Chr2g0321101 98.707 464 6 0 1 464 1 464 0.0 949
Msa0258250 MtrunA17_Chr2g0290691 50.448 446 198 8 9 441 126 561 1.36e-142 421
Msa0258250 MtrunA17_Chr3g0080101 47.853 489 190 13 14 458 331 798 2.28e-136 411
Msa0258250 MtrunA17_Chr7g0250631 52.538 394 151 6 66 443 343 716 2.23e-135 407
Msa0258250 MtrunA17_Chr7g0227331 50.457 438 188 8 19 441 166 589 5.41e-135 402
Msa0258250 MtrunA17_Chr8g0335351 53.197 391 148 6 66 440 349 720 5.92e-134 404
Msa0258250 MtrunA17_Chr1g0179101 54.124 388 151 7 66 441 449 821 1.12e-133 406
Msa0258250 MtrunA17_Chr2g0309421 49.882 425 164 8 68 462 157 562 1.15e-133 397
Msa0258250 MtrunA17_Chr7g0266031 54.639 388 149 7 66 441 471 843 7.79e-133 404
Msa0258250 MtrunA17_Chr8g0356291 52.231 381 172 5 68 444 107 481 2.34e-131 390
Msa0258250 MtrunA17_Chr6g0449401 45.062 486 192 9 32 464 210 673 1.50e-127 385
Msa0258250 MtrunA17_Chr4g0063311 48.049 410 167 8 71 451 75 467 3.64e-125 372
Msa0258250 MtrunA17_Chr2g0285711 49.862 363 156 6 90 441 78 425 3.39e-118 353
Msa0258250 MtrunA17_Chr8g0381091 45.854 410 188 9 52 448 42 430 5.96e-111 335
Msa0258250 MtrunA17_Chr2g0312641 46.036 391 175 7 66 451 71 430 2.90e-109 332
Msa0258250 MtrunA17_Chr4g0030361 46.809 376 149 7 68 443 288 612 2.33e-102 319
Msa0258250 MtrunA17_Chr2g0327561 45.953 383 166 6 61 443 601 942 1.05e-96 311
Msa0258250 MtrunA17_Chr8g0369091 42.928 403 173 10 68 462 578 931 4.60e-92 299
Msa0258250 MtrunA17_Chr8g0338741 41.972 355 179 10 97 442 26 362 2.28e-81 258
Msa0258250 MtrunA17_Chr4g0032761 38.108 370 203 7 90 444 14 372 3.18e-78 249
Msa0258250 MtrunA17_Chr2g0329011 38.617 347 175 8 97 441 23 333 1.68e-74 239
Msa0258250 MtrunA17_Chr7g0234641 35.849 371 211 9 90 452 12 363 1.22e-65 217
Msa0258250 MtrunA17_Chr6g0478601 32.708 373 200 8 70 441 95 417 9.53e-52 182
Msa0258250 MtrunA17_Chr5g0428981 31.510 384 208 9 90 464 762 1099 1.12e-51 188
Msa0258250 MtrunA17_Chr4g0018201 31.250 384 209 9 90 464 758 1095 2.47e-51 187
Msa0258250 MtrunA17_Chr1g0153321 30.278 360 214 8 84 441 101 425 2.96e-46 167
Msa0258250 MtrunA17_Chr1g0183651 30.330 333 182 7 118 441 144 435 1.25e-42 158
Msa0258250 MtrunA17_Chr1g0187581 29.235 366 207 8 85 441 111 433 1.33e-42 158
Msa0258250 MtrunA17_Chr3g0135951 30.000 360 220 8 85 441 88 418 2.33e-42 157
Msa0258250 MtrunA17_Chr1g0197721 30.919 359 180 7 81 438 41 332 1.47e-41 154
Msa0258250 MtrunA17_Chr1g0167351 29.096 354 200 8 97 441 116 427 6.46e-40 150
Msa0258250 MtrunA17_Chr1g0167311 29.107 347 208 9 97 441 121 431 6.80e-40 150
Msa0258250 MtrunA17_Chr2g0299781 29.670 364 216 9 85 441 107 437 1.02e-38 147
Msa0258250 MtrunA17_Chr7g0261491 29.003 331 191 10 119 441 145 439 4.67e-37 143
Msa0258250 MtrunA17_Chr7g0245031 36.970 165 99 2 84 248 141 300 4.85e-27 113
Msa0258250 MtrunA17_Chr7g0245031 38.400 125 72 3 320 441 301 423 5.50e-18 86.3
Msa0258250 MtrunA17_Chr4g0059751 35.542 166 97 3 88 247 86 247 1.50e-25 108
Msa0258250 MtrunA17_Chr4g0059751 35.664 143 87 3 320 459 249 389 1.61e-20 93.6
Msa0258250 MtrunA17_Chr8g0353621 26.791 321 157 7 89 409 8 250 7.65e-22 95.1
Msa0258250 MtrunA17_Chr3g0125381 42.975 121 67 1 309 427 95 215 1.30e-20 90.1
Msa0258250 MtrunA17_Chr8g0351491 27.826 345 161 11 89 427 14 276 1.75e-19 88.2
Msa0258250 MtrunA17_Chr3g0140631 31.016 187 117 3 56 242 9 183 2.37e-19 88.6
Msa0258250 MtrunA17_Chr3g0140631 43.333 90 51 0 320 409 188 277 4.74e-17 81.6
Msa0258250 MtrunA17_Chr6g0486661 41.732 127 68 5 318 442 910 1032 1.21e-18 89.4
Msa0258250 MtrunA17_Chr1g0205421 24.898 245 169 6 85 322 6 242 7.17e-18 85.9
Msa0258250 MtrunA17_Chr2g0286501 32.323 198 114 6 97 286 55 240 1.29e-17 86.3
Msa0258250 MtrunA17_Chr2g0304111 22.572 381 202 11 75 454 7 295 1.88e-17 84.7
Msa0258250 MtrunA17_Chr5g0428031 22.956 318 167 8 93 409 11 251 2.36e-17 84.3
Msa0258250 MtrunA17_Chr1g0188031 33.553 152 94 4 92 241 21 167 2.87e-17 84.0
Msa0258250 MtrunA17_Chr3g0114511 28.750 160 106 2 82 241 23 174 1.47e-16 81.6
Msa0258250 MtrunA17_Chr1g0166101 31.646 158 102 3 85 241 18 170 3.05e-16 80.5
Msa0258250 MtrunA17_Chr7g0272841 33.117 154 95 3 92 241 69 218 5.23e-16 80.5
Msa0258250 MtrunA17_Chr6g0453681 22.667 375 199 10 90 462 18 303 1.06e-15 79.3
Msa0258250 MtrunA17_Chr2g0302431 30.120 166 106 3 81 241 5 165 1.33e-15 79.0
Msa0258250 MtrunA17_Chr6g0468751 22.520 373 202 9 90 462 18 303 1.48e-15 79.0
Msa0258250 MtrunA17_Chr1g0205931 29.612 206 139 3 48 249 10 213 2.04e-15 79.0
Msa0258250 MtrunA17_Chr5g0432491 31.410 156 100 3 87 241 19 168 2.37e-15 77.8
Msa0258250 MtrunA17_Chr4g0074111 27.879 165 111 3 78 240 3 161 2.68e-15 77.4
Msa0258250 MtrunA17_Chr8g0346071 21.220 377 200 12 79 453 7 288 4.95e-15 77.0
Msa0258250 MtrunA17_Chr1g0202831 28.866 194 127 4 54 241 370 558 7.33e-15 77.4
Msa0258250 MtrunA17_Chr2g0284031 28.125 160 109 2 86 245 26 179 1.09e-14 76.3
Msa0258250 MtrunA17_Chr3g0130151 28.902 173 112 4 97 267 250 413 1.32e-14 76.3
Msa0258250 MtrunA17_Chr3g0107051 30.201 149 98 2 93 241 23 165 2.15e-14 75.1
Msa0258250 MtrunA17_Chr8g0386981 29.381 194 124 4 48 241 375 555 2.58e-14 75.5
Msa0258250 MtrunA17_Chr5g0441011 27.703 148 102 2 94 241 16 158 3.36e-14 74.3
Msa0258250 MtrunA17_Chr4g0063881 23.028 317 166 7 94 409 14 253 3.78e-14 74.3
Msa0258250 MtrunA17_Chr8g0346081 20.973 329 182 8 82 409 8 259 3.88e-14 74.3
Msa0258250 MtrunA17_Chr8g0345801 28.205 195 127 5 81 272 5 189 7.10e-14 71.6
Msa0258250 MtrunA17_Chr3g0132671 22.468 316 159 8 139 454 94 323 1.23e-13 72.8
Msa0258250 MtrunA17_Chr8g0379091 26.708 161 112 2 86 246 21 175 2.10e-13 72.4
Msa0258250 MtrunA17_Chr4g0013131 25.786 159 112 2 83 241 4 156 2.27e-13 72.0
Msa0258250 MtrunA17_Chr2g0321841 26.623 154 106 3 96 246 9 158 2.78e-13 72.4
Msa0258250 MtrunA17_Chr1g0150321 22.941 340 177 11 80 413 2 262 4.10e-13 70.9
Msa0258250 MtrunA17_Chr8g0384301 29.032 155 103 3 89 241 297 446 4.87e-13 71.2
Msa0258250 MtrunA17_Chr2g0284011 28.205 156 106 2 86 241 7 156 6.61e-13 70.5
Msa0258250 MtrunA17_Chr3g0091311 28.302 159 104 3 85 241 6 156 6.69e-13 68.6
Msa0258250 MtrunA17_Chr4g0025671 27.273 154 105 3 96 246 13 162 7.74e-13 70.9
Msa0258250 MtrunA17_Chr7g0244521 25.543 184 131 2 82 265 3 180 1.42e-12 69.3
Msa0258250 MtrunA17_Chr1g0190831 27.922 154 104 3 96 246 9 158 2.18e-12 69.3
Msa0258250 MtrunA17_Chr5g0419441 28.188 149 97 4 97 243 245 385 2.37e-12 69.3
Msa0258250 MtrunA17_Chr4g0001331 25.786 159 110 3 84 241 13 164 2.53e-12 68.6
Msa0258250 MtrunA17_Chr3g0107011 25.641 156 110 2 86 241 9 158 2.59e-12 68.6
Msa0258250 MtrunA17_Chr1g0203881 31.818 154 94 5 93 241 43 190 2.85e-12 68.6
Msa0258250 MtrunA17_Chr4g0047191 24.725 182 135 1 66 247 19 198 4.26e-12 67.4
Msa0258250 MtrunA17_Chr3g0132591 27.861 201 126 6 77 275 98 281 5.14e-12 67.8
Msa0258250 MtrunA17_Chr5g0402601 29.381 194 126 5 50 241 336 520 5.71e-12 68.2
Msa0258250 MtrunA17_Chr5g0432471 23.899 159 111 4 85 241 6 156 7.13e-12 67.4
Msa0258250 MtrunA17_Chr1g0185221 25.974 154 107 3 96 246 9 158 7.20e-12 67.8
Msa0258250 MtrunA17_Chr4g0047211 25.146 171 126 1 77 247 25 193 1.14e-11 66.2
Msa0258250 MtrunA17_Chr1g0200601 27.922 154 102 4 93 242 32 180 1.73e-11 66.2
Msa0258250 MtrunA17_Chr4g0074811 28.293 205 119 9 56 242 47 241 2.66e-11 65.9
Msa0258250 MtrunA17_Chr5g0448721 25.359 209 144 6 61 267 69 267 3.32e-11 65.5
Msa0258250 MtrunA17_Chr5g0424581 29.651 172 108 5 76 241 106 270 4.92e-11 64.3
Msa0258250 MtrunA17_Chr5g0424651 29.651 172 108 5 76 241 302 466 6.86e-11 64.3
Msa0258250 MtrunA17_Chr5g0444171 25.854 205 136 7 93 289 94 290 9.19e-11 63.9
Msa0258250 MtrunA17_Chr4g0047201 26.829 123 87 1 126 245 235 357 9.52e-11 63.9
Msa0258250 MtrunA17_Chr4g0059951 27.189 217 142 6 31 242 18 223 9.89e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258250 AT3G44610.1 63.235 476 138 7 1 464 1 451 0.0 578
Msa0258250 AT5G47750.1 48.671 489 206 9 5 459 85 562 2.90e-145 427
Msa0258250 AT3G27580.2 54.293 396 155 8 61 443 153 535 1.10e-141 418
Msa0258250 AT3G27580.1 54.293 396 155 8 61 443 153 535 1.10e-141 418
Msa0258250 AT1G79250.1 53.731 402 161 8 66 452 123 514 5.14e-139 410
Msa0258250 AT1G79250.3 53.731 402 161 8 66 452 123 514 5.14e-139 410
Msa0258250 AT1G79250.2 53.731 402 161 8 66 452 123 514 5.14e-139 410
Msa0258250 AT1G79250.4 53.731 402 161 8 66 452 123 514 5.14e-139 410
Msa0258250 AT3G12690.1 54.974 382 153 6 66 443 162 528 7.34e-139 411
Msa0258250 AT3G12690.3 54.974 382 153 6 66 443 162 528 7.34e-139 411
Msa0258250 AT3G12690.2 54.974 382 153 6 66 443 162 528 7.34e-139 411
Msa0258250 AT4G26610.1 50.117 427 167 9 33 443 79 475 3.48e-138 407
Msa0258250 AT5G55910.2 54.592 392 152 8 66 443 86 465 4.53e-138 406
Msa0258250 AT5G55910.1 54.592 392 152 8 66 443 86 465 4.53e-138 406
Msa0258250 AT1G16440.1 54.856 381 154 7 66 443 90 455 1.79e-134 397
Msa0258250 AT2G44830.2 50.580 431 188 8 16 441 304 714 3.03e-133 402
Msa0258250 AT2G44830.3 50.580 431 188 8 16 441 304 714 3.03e-133 402
Msa0258250 AT2G44830.1 50.580 431 188 8 16 441 304 714 3.03e-133 402
Msa0258250 AT5G40030.1 53.421 380 168 5 66 443 90 462 6.55e-133 393
Msa0258250 AT5G03640.2 51.750 400 155 6 66 444 516 898 5.06e-132 404
Msa0258250 AT5G03640.1 51.750 400 155 6 66 444 516 898 5.06e-132 404
Msa0258250 AT2G36350.1 52.020 396 160 8 66 444 536 918 1.20e-131 404
Msa0258250 AT3G52890.2 48.222 450 189 7 14 444 475 899 3.73e-131 402
Msa0258250 AT3G52890.4 48.222 450 189 7 14 444 475 899 3.73e-131 402
Msa0258250 AT3G52890.1 48.222 450 189 7 14 444 475 899 3.73e-131 402
Msa0258250 AT3G52890.3 48.222 450 189 7 14 444 475 899 3.73e-131 402
Msa0258250 AT2G26700.1 42.886 492 198 13 33 464 32 500 6.21e-122 366
Msa0258250 AT2G34650.1 47.045 423 185 9 38 446 19 416 3.23e-117 351
Msa0258250 AT1G53700.1 43.860 399 196 5 63 460 65 436 9.02e-103 315
Msa0258250 AT3G14370.1 46.113 373 172 6 68 438 65 410 4.42e-99 306
Msa0258250 AT5G58140.6 43.684 380 166 7 71 450 559 890 9.67e-98 314
Msa0258250 AT5G58140.7 43.684 380 166 7 71 450 559 890 9.67e-98 314
Msa0258250 AT5G58140.5 43.684 380 166 7 71 450 559 890 9.67e-98 314
Msa0258250 AT5G58140.2 43.684 380 166 7 71 450 559 890 9.67e-98 314
Msa0258250 AT5G58140.1 43.684 380 166 7 71 450 559 890 9.67e-98 314
Msa0258250 AT5G58140.3 44.628 363 153 7 71 433 559 873 8.02e-96 308
Msa0258250 AT3G45780.2 44.444 378 158 9 69 443 643 971 1.10e-92 302
Msa0258250 AT3G45780.1 44.444 378 158 9 69 443 643 971 1.10e-92 302
Msa0258250 AT1G51170.1 37.875 367 182 9 91 441 22 358 5.57e-74 238
Msa0258250 AT3G20830.1 37.709 358 185 9 97 441 27 359 1.80e-68 224
Msa0258250 AT4G13000.1 36.240 367 182 12 97 451 26 352 5.31e-68 222
Msa0258250 AT3G25250.1 35.200 375 201 10 80 443 6 349 4.57e-65 216
Msa0258250 AT3G17850.1 33.241 361 195 7 82 441 873 1188 1.24e-50 185
Msa0258250 AT1G45160.2 34.444 360 186 8 85 443 664 974 4.57e-50 184
Msa0258250 AT1G45160.1 34.444 360 186 8 85 443 664 974 6.12e-50 183
Msa0258250 AT5G04510.2 30.495 364 185 7 80 442 33 329 1.01e-49 175
Msa0258250 AT5G04510.1 30.769 364 184 7 80 442 33 329 2.58e-49 176
Msa0258250 AT3G10540.1 29.581 382 201 7 80 460 34 348 7.14e-49 174
Msa0258250 AT1G48490.4 31.675 382 192 9 85 459 823 1142 1.30e-48 179
Msa0258250 AT1G48490.3 31.675 382 192 9 85 459 822 1141 1.36e-48 179
Msa0258250 AT1G48490.2 31.675 382 192 9 85 459 822 1141 1.36e-48 179
Msa0258250 AT1G48490.1 31.675 382 192 9 85 459 822 1141 1.36e-48 179
Msa0258250 AT5G62310.1 31.755 359 199 6 90 447 753 1066 4.30e-48 178
Msa0258250 AT1G30640.3 30.946 349 203 9 97 441 33 347 1.22e-46 168
Msa0258250 AT1G30640.2 30.659 349 204 9 97 441 126 440 6.23e-46 168
Msa0258250 AT1G30640.1 30.659 349 204 9 97 441 126 440 6.23e-46 168
Msa0258250 AT5G09890.1 29.722 360 218 9 84 441 95 421 2.43e-42 157
Msa0258250 AT5G09890.2 29.722 360 218 9 84 441 95 421 2.54e-42 157
Msa0258250 AT4G33080.1 30.028 363 217 10 85 441 88 419 9.61e-42 155
Msa0258250 AT4G33080.2 30.028 363 217 10 85 441 88 419 9.75e-42 155
Msa0258250 AT3G23310.1 27.968 379 217 10 97 460 126 463 8.60e-41 154
Msa0258250 AT4G14350.3 29.683 347 206 8 97 441 125 435 3.02e-40 152
Msa0258250 AT4G14350.2 29.683 347 206 8 97 441 125 435 3.33e-40 152
Msa0258250 AT4G14350.1 29.683 347 206 8 97 441 125 435 3.33e-40 152
Msa0258250 AT4G14350.4 29.683 347 206 8 97 441 125 435 3.33e-40 152
Msa0258250 AT2G20470.3 29.226 349 203 9 97 441 130 438 1.01e-39 150
Msa0258250 AT2G20470.2 29.226 349 203 9 97 441 130 438 1.66e-39 150
Msa0258250 AT2G20470.1 29.226 349 203 9 97 441 130 438 1.66e-39 150
Msa0258250 AT1G03920.2 28.249 354 215 7 90 441 23 339 7.21e-39 146
Msa0258250 AT1G03920.1 28.531 354 214 8 90 441 136 452 1.66e-38 147
Msa0258250 AT1G03920.3 28.531 354 214 8 90 441 136 452 1.66e-38 147
Msa0258250 AT5G04510.3 28.704 324 164 6 80 403 33 289 2.12e-38 142
Msa0258250 AT2G19400.1 29.558 362 221 9 85 441 99 431 5.33e-38 145
Msa0258250 AT3G08720.1 36.478 159 96 2 90 248 139 292 3.02e-25 108
Msa0258250 AT3G08720.1 41.732 127 68 4 318 441 291 414 4.84e-21 95.9
Msa0258250 AT3G08720.3 36.478 159 96 2 90 248 139 292 3.02e-25 108
Msa0258250 AT3G08720.3 41.732 127 68 4 318 441 291 414 4.84e-21 95.9
Msa0258250 AT3G08720.4 36.478 159 96 2 90 248 139 292 3.02e-25 108
Msa0258250 AT3G08720.4 41.732 127 68 4 318 441 291 414 4.84e-21 95.9
Msa0258250 AT3G08720.2 36.478 159 96 2 90 248 139 292 3.02e-25 108
Msa0258250 AT3G08720.2 41.732 127 68 4 318 441 291 414 4.84e-21 95.9
Msa0258250 AT3G08730.1 35.220 159 98 2 90 248 133 286 1.84e-24 106
Msa0258250 AT3G08730.1 41.732 127 68 4 318 441 285 408 3.30e-22 99.4
Msa0258250 AT3G08730.2 35.220 159 98 2 90 248 133 286 1.84e-24 106
Msa0258250 AT3G08730.2 41.732 127 68 4 318 441 285 408 3.30e-22 99.4
Msa0258250 AT5G58140.4 42.969 128 68 2 71 198 559 681 1.57e-23 104
Msa0258250 AT5G18700.1 34.184 196 109 6 97 286 10 191 1.85e-22 101
Msa0258250 AT1G30270.2 24.405 336 173 10 93 426 33 289 6.81e-20 92.4
Msa0258250 AT1G30270.1 24.405 336 173 10 93 426 33 289 7.10e-20 92.4
Msa0258250 AT2G20050.2 41.964 112 61 3 320 429 931 1040 3.42e-19 91.3
Msa0258250 AT2G20050.1 41.964 112 61 3 320 429 934 1043 3.48e-19 91.3
Msa0258250 AT5G10930.1 24.390 328 170 10 84 409 5 256 4.82e-19 89.7
Msa0258250 AT4G14580.1 24.625 333 172 10 86 414 16 273 5.49e-19 89.4
Msa0258250 AT4G24400.1 23.899 318 164 8 93 409 11 251 4.76e-18 86.7
Msa0258250 AT4G24400.2 23.899 318 164 8 93 409 11 251 4.95e-18 86.3
Msa0258250 AT3G01090.3 23.575 386 203 11 79 462 8 303 5.14e-18 87.0
Msa0258250 AT3G01090.1 23.575 386 203 11 79 462 8 303 5.14e-18 87.0
Msa0258250 AT3G01090.2 23.575 386 203 11 79 462 31 326 6.23e-18 86.7
Msa0258250 AT5G35410.2 24.606 317 161 7 94 409 14 253 6.99e-18 85.5
Msa0258250 AT4G32830.1 44.444 90 50 0 320 409 182 271 7.52e-18 84.3
Msa0258250 AT4G32830.1 30.625 160 106 2 83 242 23 177 2.01e-15 77.0
Msa0258250 AT5G25110.1 22.515 342 190 7 68 409 20 286 1.72e-17 85.1
Msa0258250 AT5G35410.1 24.606 317 161 7 94 409 14 253 2.01e-17 84.7
Msa0258250 AT2G45490.1 46.667 90 48 0 320 409 173 262 2.29e-17 82.8
Msa0258250 AT2G45490.1 30.769 156 101 3 89 243 20 169 2.23e-15 77.0
Msa0258250 AT1G12680.1 29.586 169 104 5 77 243 93 248 2.76e-17 84.3
Msa0258250 AT1G01140.3 23.200 375 197 11 81 454 9 293 2.93e-17 84.3
Msa0258250 AT2G25880.2 43.956 91 51 0 320 410 144 234 3.09e-17 81.6
Msa0258250 AT1G01140.1 23.200 375 197 11 81 454 9 293 4.14e-17 84.0
Msa0258250 AT2G25880.1 31.707 164 107 2 79 242 13 171 4.40e-17 82.0
Msa0258250 AT2G25880.1 43.956 91 51 0 320 410 176 266 5.12e-17 81.6
Msa0258250 AT2G25880.4 31.707 164 107 2 79 242 26 184 4.59e-17 82.0
Msa0258250 AT2G25880.4 43.956 91 51 0 320 410 189 279 4.72e-17 82.0
Msa0258250 AT1G09000.2 30.928 194 104 4 52 241 52 219 4.83e-17 84.3
Msa0258250 AT5G45810.1 28.324 173 118 2 73 245 10 176 5.80e-17 83.6
Msa0258250 AT1G09000.1 30.928 194 104 4 52 241 52 219 6.95e-17 84.0
Msa0258250 AT2G25880.3 31.707 164 107 2 79 242 74 232 7.02e-17 82.4
Msa0258250 AT2G25880.3 43.956 91 51 0 320 410 237 327 1.34e-16 81.3
Msa0258250 AT5G57630.2 30.201 149 98 2 93 241 14 156 8.21e-17 82.8
Msa0258250 AT5G57630.1 30.201 149 98 2 93 241 14 156 8.32e-17 82.8
Msa0258250 AT3G29160.3 22.647 340 181 9 86 425 16 273 1.97e-16 80.9
Msa0258250 AT3G29160.1 22.647 340 181 9 86 425 16 273 2.19e-16 82.0
Msa0258250 AT3G29160.2 22.647 340 181 9 86 425 16 273 2.19e-16 82.0
Msa0258250 AT1G01140.2 22.691 379 196 11 81 454 9 295 3.19e-16 81.3
Msa0258250 AT2G34180.1 29.630 162 108 2 81 242 47 202 5.03e-16 80.9
Msa0258250 AT1G29230.1 29.193 161 108 2 81 241 64 218 7.88e-16 80.1
Msa0258250 AT3G06030.1 30.939 181 102 4 78 249 60 226 8.81e-16 80.5
Msa0258250 AT5G39440.1 23.513 353 185 8 86 438 15 282 9.69e-16 79.7
Msa0258250 AT1G54960.1 32.075 159 90 3 92 241 69 218 1.02e-15 80.1
Msa0258250 AT1G54960.2 32.075 159 90 3 92 241 69 218 1.02e-15 80.1
Msa0258250 AT2G45490.2 30.189 159 104 3 89 246 20 172 2.37e-15 76.3
Msa0258250 AT2G45490.2 42.683 82 47 0 320 401 173 254 2.65e-12 67.4
Msa0258250 AT1G53570.7 29.897 194 120 5 97 283 220 404 4.04e-15 78.2
Msa0258250 AT1G53570.6 29.897 194 120 5 97 283 220 404 4.14e-15 78.2
Msa0258250 AT1G53570.1 32.653 147 92 3 97 241 220 361 4.26e-15 78.2
Msa0258250 AT1G53570.2 32.653 147 92 3 97 241 220 361 4.29e-15 78.2
Msa0258250 AT1G53570.3 32.653 147 92 3 97 241 220 361 4.29e-15 78.2
Msa0258250 AT1G53570.4 32.653 147 92 3 97 241 220 361 4.49e-15 78.2
Msa0258250 AT2G26980.1 22.257 319 168 8 94 409 17 258 5.51e-15 77.0
Msa0258250 AT2G26980.2 22.222 315 165 8 94 405 17 254 6.79e-15 75.1
Msa0258250 AT2G26980.3 22.257 319 168 8 94 409 17 258 7.45e-15 77.0
Msa0258250 AT4G18700.1 29.167 168 112 3 78 245 14 174 8.01e-15 77.0
Msa0258250 AT2G26980.5 22.257 319 168 8 94 409 17 258 8.18e-15 76.6
Msa0258250 AT2G26980.4 22.257 319 168 8 94 409 27 268 8.62e-15 76.6
Msa0258250 AT3G23000.1 30.625 160 101 4 85 241 19 171 1.82e-14 75.5
Msa0258250 AT1G48260.1 23.077 338 172 11 93 425 13 267 3.08e-14 75.1
Msa0258250 AT2G30360.1 29.221 154 103 3 93 245 23 171 6.26e-14 73.9
Msa0258250 AT3G17510.1 30.201 149 99 2 93 241 22 165 1.18e-13 73.2
Msa0258250 AT5G21326.1 27.703 148 102 2 94 241 16 158 1.30e-13 73.2
Msa0258250 AT2G38490.1 33.333 153 88 5 93 241 30 172 1.34e-13 72.8
Msa0258250 AT5G45820.1 27.564 156 107 2 86 241 7 156 1.70e-13 72.8
Msa0258250 AT1G63700.1 27.419 186 122 3 89 264 398 580 1.75e-13 73.6
Msa0258250 AT1G63700.2 27.419 186 122 3 89 264 398 580 1.75e-13 73.6
Msa0258250 AT2G38910.1 24.731 279 188 8 53 316 86 357 2.94e-13 72.4
Msa0258250 AT1G54510.4 26.752 157 108 3 93 246 6 158 5.98e-13 71.6
Msa0258250 AT1G54510.2 26.752 157 108 3 93 246 6 158 5.98e-13 71.6
Msa0258250 AT1G54510.1 26.752 157 108 3 93 246 6 158 5.98e-13 71.6
Msa0258250 AT1G54510.3 26.752 157 108 3 93 246 6 158 5.98e-13 71.6
Msa0258250 AT5G38210.1 33.766 154 88 4 93 241 360 504 6.08e-13 71.6
Msa0258250 AT1G66880.3 35.065 154 86 5 93 241 348 492 7.23e-13 71.2
Msa0258250 AT3G44200.2 26.623 154 106 3 96 246 13 162 7.53e-13 71.6
Msa0258250 AT3G44200.1 26.623 154 106 3 96 246 13 162 7.53e-13 71.6
Msa0258250 AT1G66880.1 33.766 154 88 4 93 241 969 1113 8.58e-13 71.2
Msa0258250 AT1G66880.2 35.065 154 86 5 93 241 590 734 1.05e-12 70.9
Msa0258250 AT3G61960.2 30.769 143 93 3 87 229 6 142 1.11e-12 70.5
Msa0258250 AT3G61960.1 30.769 143 93 3 87 229 6 142 1.24e-12 70.5
Msa0258250 AT5G38210.2 35.065 154 86 5 93 241 372 516 1.25e-12 70.5
Msa0258250 AT5G38210.3 35.065 154 86 5 93 241 354 498 1.28e-12 70.5
Msa0258250 AT1G35670.1 23.615 343 172 12 82 411 10 275 1.71e-12 69.7
Msa0258250 AT2G25090.1 28.743 167 111 4 77 241 1 161 2.21e-12 69.3
Msa0258250 AT5G28290.1 26.623 154 106 3 96 246 9 158 3.31e-12 68.9
Msa0258250 AT5G28290.2 26.623 154 106 3 96 246 9 158 3.31e-12 68.9
Msa0258250 AT5G28290.3 26.623 154 106 3 96 246 9 158 3.57e-12 68.9
Msa0258250 AT1G50700.3 28.824 170 108 5 93 256 75 237 4.02e-12 68.6
Msa0258250 AT3G20410.2 27.647 170 110 5 93 256 93 255 4.72e-12 68.6
Msa0258250 AT3G20410.1 27.647 170 110 5 93 256 93 255 4.72e-12 68.6
Msa0258250 AT3G04810.2 25.974 154 107 3 96 246 9 158 5.31e-12 68.6
Msa0258250 AT3G04810.1 25.974 154 107 3 96 246 9 158 5.31e-12 68.6
Msa0258250 AT3G04810.3 25.974 154 107 3 96 246 9 158 5.31e-12 68.6
Msa0258250 AT1G50700.1 28.824 170 108 5 93 256 75 237 5.49e-12 68.2
Msa0258250 AT1G50700.2 28.824 170 108 5 93 256 75 237 6.49e-12 68.2
Msa0258250 AT4G09570.1 23.615 343 172 12 82 411 9 274 7.40e-12 67.8
Msa0258250 AT5G01810.3 26.316 171 119 3 97 267 18 181 9.04e-12 67.0
Msa0258250 AT5G58950.1 25.000 164 120 1 85 245 201 364 1.18e-11 67.4
Msa0258250 AT5G01820.1 30.201 149 98 2 97 245 28 170 1.41e-11 66.6
Msa0258250 AT5G01810.1 26.316 171 119 3 97 267 18 181 1.48e-11 66.6
Msa0258250 AT5G01810.2 26.316 171 119 3 97 267 18 181 1.48e-11 66.6
Msa0258250 AT4G30960.1 26.923 156 108 2 86 241 19 168 1.92e-11 66.2
Msa0258250 AT5G21222.1 27.500 120 85 1 121 240 40 157 3.25e-11 66.2
Msa0258250 AT5G21222.2 27.500 120 85 1 121 240 40 157 3.25e-11 66.2
Msa0258250 AT5G21222.4 27.500 120 85 1 121 240 40 157 3.25e-11 66.2
Msa0258250 AT5G21222.3 27.500 120 85 1 121 240 40 157 3.25e-11 66.2
Msa0258250 AT4G10010.2 34.667 150 86 5 96 241 161 302 3.48e-11 65.9

Find 193 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCTTATCTTACAGTTAT+TGG 0.150192 2_2:-54477171 Msa0258250:CDS
GCTGGCACGGTGGGTTCCTT+TGG 0.242137 2_2:+54477203 None:intergenic
TTGATGACAAATTAAATTAA+TGG 0.251658 2_2:-54476553 Msa0258250:three_prime_UTR
TCTTCTTTGTCTTTAGTATA+AGG 0.254492 2_2:+54477026 None:intergenic
CCCTCACCAGACACTATTTC+AGG 0.255306 2_2:+54477356 None:intergenic
TTAGCTAGCTAGTTGAATTC+AGG 0.265600 2_2:-54476711 Msa0258250:three_prime_UTR
AAGAAACAAAACCAGTTTAA+TGG 0.274820 2_2:-54477449 Msa0258250:CDS
GAGATGGAGGAAATAACTTT+TGG 0.288962 2_2:+54482381 None:intergenic
ATTGATCCTAGCCTTCTTGC+TGG 0.297843 2_2:+54477140 None:intergenic
CTGGCACGGTGGGTTCCTTT+GGG 0.303503 2_2:+54477204 None:intergenic
AGTGTTACAGTTGTTGAAAA+TGG 0.307735 2_2:+54482340 None:intergenic
TTCCACGTATTTACGCAATA+AGG 0.313248 2_2:+54476783 None:intergenic
TGATGACAAATTAAATTAAT+GGG 0.329498 2_2:-54476552 Msa0258250:three_prime_UTR
CAAGCTCAATCAACATAGTT+TGG 0.334165 2_2:+54476573 None:intergenic
GTGGTGGTTGGAGGAGGAGG+AGG 0.336101 2_2:+54482030 None:intergenic
TCATTATCCAAGCCTCTAAA+AGG 0.349968 2_2:+54477266 None:intergenic
GTATAAGGTGGTGGAACATA+AGG 0.354450 2_2:+54477041 None:intergenic
TATCTTACAGTTATTGGTTA+AGG 0.355551 2_2:-54477165 Msa0258250:CDS
CAAACTCAGGCCCATTAAAC+TGG 0.357269 2_2:+54477438 None:intergenic
AAGGAGAGAGTGAGAGTAAA+CGG 0.358530 2_2:+54482310 None:intergenic
TTGCTGAGCCCATTGATGTT+AGG 0.359674 2_2:-54477415 Msa0258250:CDS
GCTGTGGATTGGTGGACCTT+AGG 0.360224 2_2:-54477323 Msa0258250:CDS
TTGGTGGTGGTTGGAGGAGG+AGG 0.362759 2_2:+54482027 None:intergenic
AAATGGGTCTTTCTCAAAAC+GGG 0.365534 2_2:+54482357 None:intergenic
CAAAGTCTGTGAGCATTATA+TGG 0.368029 2_2:+54477660 None:intergenic
CTATTGTCTTTATATTTAAG+AGG 0.370138 2_2:-54476624 Msa0258250:three_prime_UTR
AGAAACAAAACCAGTTTAAT+GGG 0.372442 2_2:-54477448 Msa0258250:CDS
AAGAAGGCTAGGATCAATAA+TGG 0.382085 2_2:-54477135 Msa0258250:CDS
GATATAAGTGGGGTTGGGAA+TGG 0.383003 2_2:+54482280 None:intergenic
TATAAGGTGGTGGAACATAA+GGG 0.389166 2_2:+54477042 None:intergenic
GCGGGAGAAGCGGAGGTCGG+AGG 0.394531 2_2:+54481924 None:intergenic
TGTTTGGTGGTGGTTGGAGG+AGG 0.396205 2_2:+54482024 None:intergenic
AGAAGGCTAGGATCAATAAT+GGG 0.404261 2_2:-54477134 Msa0258250:CDS
TTAGGTCCATGTCATTTGTT+GGG 0.405437 2_2:-54477397 Msa0258250:CDS
AAATATCGTGGCTCGAGCTT+TGG 0.409780 2_2:-54477231 Msa0258250:CDS
GAGGAGGAGGAGGGAAGGGA+AGG 0.411817 2_2:+54482040 None:intergenic
TAAATATAAAGACAATAGTA+TGG 0.417788 2_2:+54476629 None:intergenic
CAACGATGATGGAAAGATTC+CGG 0.419156 2_2:-54481857 Msa0258250:CDS
GGAGCTTGTTAGTAGGAGTA+AGG 0.422662 2_2:-54481803 Msa0258250:CDS
CTATGCATCAGAAGTGTTGA+TGG 0.422952 2_2:-54477759 Msa0258250:CDS
CTTGAATACCTTCACATGTT+GGG 0.423434 2_2:-54477734 Msa0258250:CDS
ATATAAGTGGGGTTGGGAAT+GGG 0.427457 2_2:+54482281 None:intergenic
GTTGGAGGAGGAGGAGGGAA+GGG 0.427718 2_2:+54482036 None:intergenic
AAAATGGGTCTTTCTCAAAA+CGG 0.428590 2_2:+54482356 None:intergenic
TGATTATTATTGATGACAAT+AGG 0.429551 2_2:-54476970 Msa0258250:exon
GATGCGACGAGAAGGGGATT+CGG 0.430492 2_2:+54481951 None:intergenic
GGTTGGAGGAGGAGGAGGGA+AGG 0.431258 2_2:+54482035 None:intergenic
AGAAGCGGAGGTCGGAGGGG+AGG 0.432585 2_2:+54481929 None:intergenic
CTTGTTAGTAGGAGTAAGGA+AGG 0.432647 2_2:-54481799 Msa0258250:CDS
TTCCTCCTTCTATTGCGATC+CGG 0.432704 2_2:+54476743 None:intergenic
GTTAGGTCCATGTCATTTGT+TGG 0.444549 2_2:-54477398 Msa0258250:CDS
CTCCGCTTCTCCCGCCGTCT+CGG 0.445241 2_2:-54481916 Msa0258250:CDS
GTGTGAATTGGGCTTTGTTA+AGG 0.446627 2_2:-54477076 Msa0258250:CDS
GATCGAACTAATACATTCTC+AGG 0.446844 2_2:+54477689 None:intergenic
TGTCATCAATAATAATCAAC+AGG 0.446969 2_2:+54476975 None:intergenic
ATGGTGACAAATTAACTTAA+CGG 0.452222 2_2:+54476648 None:intergenic
GGGAGCCGGATCGCAATAGA+AGG 0.452566 2_2:-54476748 Msa0258250:three_prime_UTR
CGGGAGAAGCGGAGGTCGGA+GGG 0.454029 2_2:+54481925 None:intergenic
AGCCGAGACGGCGGGAGAAG+CGG 0.455018 2_2:+54481914 None:intergenic
GGAGGAAGGAGCGTGATGTT+TGG 0.455035 2_2:+54482008 None:intergenic
GTGTTACAGTTGTTGAAAAT+GGG 0.458376 2_2:+54482341 None:intergenic
GGAGAGATGAGCAGAGGTTG+AGG 0.463067 2_2:+54482071 None:intergenic
CTGTGGATTGGTGGACCTTA+GGG 0.463222 2_2:-54477322 Msa0258250:CDS
TTTGCCGTGGCTGGCACGGT+GGG 0.463953 2_2:+54477194 None:intergenic
GCGTGATGTTTGGTGGTGGT+TGG 0.465818 2_2:+54482018 None:intergenic
TAGCTAGCTAGTTGAATTCA+GGG 0.467070 2_2:-54476710 Msa0258250:three_prime_UTR
TGATGTTTGGTGGTGGTTGG+AGG 0.467304 2_2:+54482021 None:intergenic
TGACATGGACCTAACATCAA+TGG 0.468421 2_2:+54477406 None:intergenic
TTCTCCCGCCGTCTCGGCTC+CGG 0.470534 2_2:-54481910 Msa0258250:CDS
CACGCTGGTCCGCCATTCAC+CGG 0.472726 2_2:-54481981 Msa0258250:CDS
AGAGTGAGAGTAAACGGAGG+TGG 0.474224 2_2:+54482316 None:intergenic
TTGATCCTAGCCTTCTTGCT+GGG 0.474888 2_2:+54477141 None:intergenic
GGTTCAATGAATCCGCCGTC+AGG 0.475293 2_2:-54481618 Msa0258250:intron
CTACCATTGATGCTGCGAAA+TGG 0.477406 2_2:-54481711 Msa0258250:CDS
AAAGATTCCGGCGATGTTTG+CGG 0.478593 2_2:-54481845 Msa0258250:CDS
TAATAATCAACAGGAGTTTG+TGG 0.481895 2_2:+54476984 None:intergenic
AGGAGGAGGAGGGAAGGGAA+GGG 0.482202 2_2:+54482041 None:intergenic
GACATGGACCTAACATCAAT+GGG 0.485341 2_2:+54477407 None:intergenic
GCGGTGATCTTCACGTTCTC+CGG 0.486794 2_2:-54481660 Msa0258250:CDS
ATAAGAAGGAGCTTGTTAGT+AGG 0.488431 2_2:-54481810 Msa0258250:CDS
AAACCCGACCGCAGGGGAGC+CGG 0.488589 2_2:-54476762 Msa0258250:three_prime_UTR
AGGGAAGGGAAGGGATCGAC+CGG 0.489446 2_2:+54482050 None:intergenic
AGGGGAGGATGCGACGAGAA+GGG 0.490748 2_2:+54481944 None:intergenic
CTCGCTGAACTCAACGATGA+TGG 0.490977 2_2:-54481868 Msa0258250:CDS
ATCTTCACGTTCTCCGGCAA+CGG 0.491111 2_2:-54481654 Msa0258250:CDS
TTCGGATTGGATCCGGTGAA+TGG 0.492447 2_2:+54481969 None:intergenic
TGTTATGATATAAGTGGGGT+TGG 0.493281 2_2:+54482274 None:intergenic
CACTGCTGGGACTATACAGT+TGG 0.494527 2_2:+54477502 None:intergenic
GATCCGGCTCCCCTGCGGTC+GGG 0.496016 2_2:+54476759 None:intergenic
GGTTGGAAACAAGACACTGC+TGG 0.499710 2_2:+54477488 None:intergenic
AAGGGGATTCGGATTGGATC+CGG 0.502813 2_2:+54481962 None:intergenic
GAGGGGAGGATGCGACGAGA+AGG 0.505089 2_2:+54481943 None:intergenic
TGGAGGCGAAGCTTAGGCTC+TGG 0.505224 2_2:+54482151 None:intergenic
GGTTGGGAATGGGTTGAAGA+AGG 0.506257 2_2:+54482291 None:intergenic
TAAGGAAGGAAGAGCGAAGA+CGG 0.506830 2_2:-54481785 Msa0258250:CDS
GGGGAGGATGCGACGAGAAG+GGG 0.510250 2_2:+54481945 None:intergenic
GACATGGTAGTGCTGTGGAT+TGG 0.510805 2_2:-54477334 Msa0258250:CDS
TCAACCTCTGCTCATCTCTC+CGG 0.510834 2_2:-54482069 Msa0258250:CDS
TTAGCTCCTGAAATAGTGTC+TGG 0.512885 2_2:-54477362 Msa0258250:CDS
TTTCAGGAGCTAAGTATTCG+TGG 0.516681 2_2:+54477372 None:intergenic
GACCAGCGTGGGTCGGAGGA+AGG 0.516809 2_2:+54481994 None:intergenic
GAGCCACGGGTCCATTGCGT+TGG 0.516889 2_2:+54482194 None:intergenic
CGATCCGGCTCCCCTGCGGT+CGG 0.517670 2_2:+54476758 None:intergenic
GGGAGAAGCGGAGGTCGGAG+GGG 0.518248 2_2:+54481926 None:intergenic
TGGTGGTTGGAGGAGGAGGA+GGG 0.519385 2_2:+54482031 None:intergenic
GACGAGAAGGGGATTCGGAT+TGG 0.522524 2_2:+54481956 None:intergenic
ACTTGAATACCTTCACATGT+TGG 0.522765 2_2:-54477735 Msa0258250:CDS
TTGTCTTTAGTATAAGGTGG+TGG 0.522892 2_2:+54477032 None:intergenic
TATCTTAAACGTGTGAATGC+TGG 0.524710 2_2:+54476923 None:intergenic
CGGTTAGATCGTCGAGCCAC+GGG 0.525260 2_2:+54482181 None:intergenic
GGTGACAGTGGTGGTTGTTG+TGG 0.525776 2_2:+54482131 None:intergenic
GTCGCCGGAGCCGAGACGGC+GGG 0.526860 2_2:+54481906 None:intergenic
TTGGAGATTATTATCTGAGC+TGG 0.529430 2_2:+54477605 None:intergenic
GGCGGACCAGCGTGGGTCGG+AGG 0.530429 2_2:+54481990 None:intergenic
TGATGTCGCCGGAGCCGAGA+CGG 0.534164 2_2:+54481902 None:intergenic
ATGGTAGTGCTGTGGATTGG+TGG 0.535208 2_2:-54477331 Msa0258250:CDS
GCTTGTGCTGCGTTTGATGT+CGG 0.537321 2_2:+54482104 None:intergenic
TCTTTGTCTTTAGTATAAGG+TGG 0.537665 2_2:+54477029 None:intergenic
AATGTATTAGTTCGATCAGA+TGG 0.539764 2_2:-54477683 Msa0258250:CDS
TCGGTTAGATCGTCGAGCCA+CGG 0.541043 2_2:+54482180 None:intergenic
TGAGTGTGTTATGATATAAG+TGG 0.544289 2_2:+54482268 None:intergenic
GTTGGAAACAAGACACTGCT+GGG 0.545351 2_2:+54477489 None:intergenic
ACGGCGGGAGAAGCGGAGGT+CGG 0.545559 2_2:+54481921 None:intergenic
AATGGCGGACCAGCGTGGGT+CGG 0.549165 2_2:+54481987 None:intergenic
TTGTTGTGGAGGCGAAGCTT+AGG 0.553466 2_2:+54482145 None:intergenic
CGGTGAATGGCGGACCAGCG+TGG 0.553706 2_2:+54481982 None:intergenic
GAGCCATTTCGCAGCATCAA+TGG 0.554337 2_2:+54481708 None:intergenic
ATGGGCTCAGCAACAAACTC+AGG 0.554582 2_2:+54477425 None:intergenic
ATAAGGTGGTGGAACATAAG+GGG 0.560134 2_2:+54477043 None:intergenic
GTTATGATATAAGTGGGGTT+GGG 0.561605 2_2:+54482275 None:intergenic
ATACGTGGAAACCCGACCGC+AGG 0.564427 2_2:-54476770 Msa0258250:three_prime_UTR
GGAAGGAGCGTGATGTTTGG+TGG 0.565321 2_2:+54482011 None:intergenic
GGGTATTATGCACGAAGATG+AGG 0.565764 2_2:+54477523 None:intergenic
GAGTGTGTTATGATATAAGT+GGG 0.566477 2_2:+54482269 None:intergenic
AAGGACCCAGCAAGAAGGCT+AGG 0.566657 2_2:-54477146 Msa0258250:CDS
TTCGAATATAAATATCCCTA+AGG 0.566988 2_2:+54477307 None:intergenic
TACGTGGAAACCCGACCGCA+GGG 0.572118 2_2:-54476769 Msa0258250:three_prime_UTR
GGCGAAAGTGATGGATAAGA+AGG 0.573191 2_2:-54481824 Msa0258250:CDS
GCTGCGTTTGATGTCGGCGG+TGG 0.576561 2_2:+54482110 None:intergenic
ATCCTTATTGCGTAAATACG+TGG 0.577196 2_2:-54476785 Msa0258250:three_prime_UTR
CATTCTCAGGCTTCAGATCA+CGG 0.578761 2_2:+54477702 None:intergenic
CGAGACGGCGGGAGAAGCGG+AGG 0.579319 2_2:+54481917 None:intergenic
GGAACCCACCGTGCCAGCCA+CGG 0.579506 2_2:-54477198 Msa0258250:CDS
AGGAGCGTGATGTTTGGTGG+TGG 0.581035 2_2:+54482014 None:intergenic
TAAGGTGGTGGAACATAAGG+GGG 0.582230 2_2:+54477044 None:intergenic
TTCAGGAGCTAAGTATTCGT+GGG 0.583402 2_2:+54477373 None:intergenic
GGTGAATGGCGGACCAGCGT+GGG 0.588266 2_2:+54481983 None:intergenic
TAGACACAACGCCAACGCAA+TGG 0.588457 2_2:-54482205 Msa0258250:exon
TCCTGAAATAGTGTCTGGTG+AGG 0.592404 2_2:-54477357 Msa0258250:CDS
CTCCTTCCTCCGACCCACGC+TGG 0.592942 2_2:-54481996 Msa0258250:CDS
ACTTTCGCCGCAAACATCGC+CGG 0.593418 2_2:+54481838 None:intergenic
GATGTTTGCGGCGAAAGTGA+TGG 0.594332 2_2:-54481833 Msa0258250:CDS
GACAGTGGTGGTTGTTGTGG+AGG 0.594718 2_2:+54482134 None:intergenic
GGCAACGGCAGCAAAACAAA+CGG 0.594934 2_2:-54481639 Msa0258250:CDS
ACTGCTGGGACTATACAGTT+GGG 0.600875 2_2:+54477503 None:intergenic
ACGCCAACGCAATGGACCCG+TGG 0.603133 2_2:-54482197 Msa0258250:exon
CCTGAAATAGTGTCTGGTGA+GGG 0.604464 2_2:-54477356 Msa0258250:CDS
GAGAGAGTGAGAGTAAACGG+AGG 0.611612 2_2:+54482313 None:intergenic
GTAGACAGAGCTGATGTCGC+CGG 0.615555 2_2:+54481891 None:intergenic
TGGTTAAGGACCCAGCAAGA+AGG 0.615648 2_2:-54477151 Msa0258250:CDS
AGAACGTGAAGATCACCGCC+AGG 0.616021 2_2:+54481664 None:intergenic
GCTTAGGCTCTGGAGGTCGT+CGG 0.617095 2_2:+54482161 None:intergenic
ACACTATTCCCAACATGTGA+AGG 0.617621 2_2:+54477726 None:intergenic
AAATTGTGAGTGTTCACTGT+GGG 0.628128 2_2:+54477547 None:intergenic
TCAATGGTAGCATAAAGAGT+AGG 0.628667 2_2:+54481724 None:intergenic
TCGAGCTTTGGAGTTCCCAA+AGG 0.630634 2_2:-54477219 Msa0258250:CDS
GAAGGCTAGGATCAATAATG+GGG 0.632594 2_2:-54477133 Msa0258250:CDS
TGAGGGACATGGTAGTGCTG+TGG 0.637250 2_2:-54477339 Msa0258250:CDS
AGGCGAAGCTTAGGCTCTGG+AGG 0.637580 2_2:+54482154 None:intergenic
TGTCGCCGGAGCCGAGACGG+CGG 0.642917 2_2:+54481905 None:intergenic
GTGGGTCCCAACAAATGACA+TGG 0.643455 2_2:+54477391 None:intergenic
GATGTCGGCGGTGGTGACAG+TGG 0.644046 2_2:+54482119 None:intergenic
GATTATTATCTGAGCTGGTG+TGG 0.648376 2_2:+54477610 None:intergenic
AGCCGGATCGCAATAGAAGG+AGG 0.648833 2_2:-54476745 Msa0258250:three_prime_UTR
ATTGCGATCCGGCTCCCCTG+CGG 0.650041 2_2:+54476754 None:intergenic
AGGAGAGCTTGTATTCCACA+TGG 0.652880 2_2:-54476950 Msa0258250:three_prime_UTR
GGATTGGATCCGGTGAATGG+CGG 0.656828 2_2:+54481972 None:intergenic
GTCGGCGGTGGTGACAGTGG+TGG 0.662150 2_2:+54482122 None:intergenic
AATGGGTCTTTCTCAAAACG+GGG 0.675892 2_2:+54482358 None:intergenic
AATTGTGAGTGTTCACTGTG+GGG 0.682910 2_2:+54477548 None:intergenic
TGTGCTGCGTTTGATGTCGG+CGG 0.684906 2_2:+54482107 None:intergenic
AGTGTGTTATGATATAAGTG+GGG 0.685149 2_2:+54482270 None:intergenic
ACGTGGAAACCCGACCGCAG+GGG 0.693813 2_2:-54476768 Msa0258250:three_prime_UTR
GTGAATGCTGGTTATCCATG+TGG 0.693998 2_2:+54476935 None:intergenic
TCGACCGGAGAGATGAGCAG+AGG 0.695003 2_2:+54482065 None:intergenic
TGGAAGTGCTTACCTGACGG+CGG 0.700077 2_2:+54481606 None:intergenic
ATTAACTCTAGCAAATATCG+TGG 0.701691 2_2:-54477243 Msa0258250:CDS
ATGGGTCTTTCTCAAAACGG+GGG 0.708269 2_2:+54482359 None:intergenic
AAGGCTAGGATCAATAATGG+GGG 0.726443 2_2:-54477132 Msa0258250:CDS
ATAGTGTCTGGTGAGGGACA+TGG 0.727885 2_2:-54477350 Msa0258250:CDS
CATCATCGTTGAGTTCAGCG+AGG 0.734744 2_2:+54481869 None:intergenic
ACGCAATAAGGATATCAGTG+TGG 0.741718 2_2:+54476795 None:intergenic
CAAATTGTGAGTGTTCACTG+TGG 0.769274 2_2:+54477546 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAATAATTTTTTTTA+AGG + chr2_2:54479726-54479745 None:intergenic 0.0%
!!! ATGTTTTTTTTTGTTAAAAT+CGG - chr2_2:54478033-54478052 Msa0258250:intron 10.0%
!! ATTAAAAAAATATACATTTG+AGG + chr2_2:54478060-54478079 None:intergenic 10.0%
!!! ATATTAATAGTTGTTAATTT+TGG + chr2_2:54478350-54478369 None:intergenic 10.0%
!! TTAATTACACTATAAATAAT+TGG - chr2_2:54478973-54478992 Msa0258250:intron 10.0%
!! ATTTAAATTATATATACCAA+CGG - chr2_2:54479737-54479756 Msa0258250:intron 10.0%
!! TATAATAAAAATTCTTGAAT+TGG + chr2_2:54480251-54480270 None:intergenic 10.0%
!!! TTTATATTCGAATTATTTTA+TGG - chr2_2:54481639-54481658 Msa0258250:CDS 10.0%
!!! GAAAATAAAAAGAATTATTT+TGG + chr2_2:54482068-54482087 None:intergenic 10.0%
!! TTGTAACAATGTAATTATAT+AGG + chr2_2:54477489-54477508 None:intergenic 15.0%
!!! TTTTTTTTTTTGAGCAATAA+AGG - chr2_2:54478165-54478184 Msa0258250:intron 15.0%
!!! TAATTTTGGTTTTTTCTATA+GGG + chr2_2:54478336-54478355 None:intergenic 15.0%
!!! TTAATTTTGGTTTTTTCTAT+AGG + chr2_2:54478337-54478356 None:intergenic 15.0%
!! AACTATTAATATATTGACAT+TGG - chr2_2:54478358-54478377 Msa0258250:intron 15.0%
!! AAATATAATCAAAGTAAGTT+AGG - chr2_2:54478775-54478794 Msa0258250:intron 15.0%
!!! TTTAAATTTTGAACTGTTTT+TGG + chr2_2:54479543-54479562 None:intergenic 15.0%
!! ATTACATTGTGAATTTAAAT+AGG - chr2_2:54479611-54479630 Msa0258250:intron 15.0%
!!! GATTAATTTATATGTTTTGA+TGG + chr2_2:54479860-54479879 None:intergenic 15.0%
!!! AATTACTATTATGCTTTTTT+TGG - chr2_2:54480391-54480410 Msa0258250:intron 15.0%
!! TAAATATAAAGACAATAGTA+TGG + chr2_2:54482309-54482328 None:intergenic 15.0%
!!! TTGATGACAAATTAAATTAA+TGG - chr2_2:54482382-54482401 Msa0258250:five_prime_UTR 15.0%
!! TGATGACAAATTAAATTAAT+GGG - chr2_2:54482383-54482402 Msa0258250:five_prime_UTR 15.0%
!! AACAATGTAATTATATAGGT+TGG + chr2_2:54477485-54477504 None:intergenic 20.0%
!! TATAATTACATTGTTACAAG+TGG - chr2_2:54477490-54477509 Msa0258250:CDS 20.0%
!! TGTTATGAAAGTTATGATAA+CGG + chr2_2:54477690-54477709 None:intergenic 20.0%
!! TGTCTTTATGACATTTATTA+AGG + chr2_2:54478085-54478104 None:intergenic 20.0%
!! CAATTCAATTCATAAAGTAA+AGG - chr2_2:54478134-54478153 Msa0258250:intron 20.0%
!!! AGAATCAAACTTTTTTTTGA+GGG + chr2_2:54478281-54478300 None:intergenic 20.0%
!!! AATTTTGGTTTTTTCTATAG+GGG + chr2_2:54478335-54478354 None:intergenic 20.0%
!!! ACTCATTGTATCATATTTTA+GGG - chr2_2:54478431-54478450 Msa0258250:intron 20.0%
!!! TCATATTTTAGGGAATAATA+TGG - chr2_2:54478441-54478460 Msa0258250:intron 20.0%
!!! CATATTTTAGGGAATAATAT+GGG - chr2_2:54478442-54478461 Msa0258250:intron 20.0%
!!! ATATTTTAGGGAATAATATG+GGG - chr2_2:54478443-54478462 Msa0258250:intron 20.0%
!! ACTATAATGAAATTTCATTG+AGG + chr2_2:54478568-54478587 None:intergenic 20.0%
!!! AAAATTACACGTTTTCAAAT+GGG - chr2_2:54478800-54478819 Msa0258250:intron 20.0%
!!! ACAAATAGTACTTTTTTTGT+GGG + chr2_2:54479389-54479408 None:intergenic 20.0%
!!! AACAAATAGTACTTTTTTTG+TGG + chr2_2:54479390-54479409 None:intergenic 20.0%
!!! CAAAAAAAGTACTATTTGTT+TGG - chr2_2:54479390-54479409 Msa0258250:intron 20.0%
!!! CTCTAGAATTTACAAATATA+TGG - chr2_2:54479492-54479511 Msa0258250:intron 20.0%
!!! TTCTATTTAAGATCATTTGA+TGG - chr2_2:54479805-54479824 Msa0258250:intron 20.0%
!!! ATTCCATTTTAAAAAGTTGA+TGG + chr2_2:54479898-54479917 None:intergenic 20.0%
!! GTATAAATTTACTTAATGAG+AGG - chr2_2:54480018-54480037 Msa0258250:intron 20.0%
!!! TTATGAACACAATTTCTTTT+TGG + chr2_2:54480212-54480231 None:intergenic 20.0%
!!! GACATTGAAAATAATGTTTT+GGG + chr2_2:54480797-54480816 None:intergenic 20.0%
!!! TGACATTGAAAATAATGTTT+TGG + chr2_2:54480798-54480817 None:intergenic 20.0%
!! CATAGAATCTGTAAAAAAAA+AGG + chr2_2:54481161-54481180 None:intergenic 20.0%
!!! TGATTATTATTGATGACAAT+AGG - chr2_2:54481965-54481984 Msa0258250:CDS 20.0%
!! AAAAATACTGAACTTGAATT+TGG - chr2_2:54482094-54482113 Msa0258250:CDS 20.0%
!! CTATTGTCTTTATATTTAAG+AGG - chr2_2:54482311-54482330 Msa0258250:five_prime_UTR 20.0%
!! TGTCTAACTAAGTATTTTCT+CGG + chr2_2:54476716-54476735 None:intergenic 25.0%
! TAATTACGATGATGCTAAAA+TGG + chr2_2:54477352-54477371 None:intergenic 25.0%
! AGTGAAAATAGAAACTAAGA+GGG - chr2_2:54477603-54477622 Msa0258250:CDS 25.0%
! ATCATAACTTTCATAACAGA+CGG - chr2_2:54477692-54477711 Msa0258250:CDS 25.0%
!!! CTAATTCATGTTTGTTTTGT+AGG - chr2_2:54477741-54477760 Msa0258250:CDS 25.0%
! AATTAAGTCAATGCTTGTAT+TGG + chr2_2:54477927-54477946 None:intergenic 25.0%
! TAGATGATTGAGTATATTGA+TGG - chr2_2:54477967-54477986 Msa0258250:intron 25.0%
!!! GAGAATCAAACTTTTTTTTG+AGG + chr2_2:54478282-54478301 None:intergenic 25.0%
! CTAAAATATGATACAATGAG+TGG + chr2_2:54478432-54478451 None:intergenic 25.0%
!! CACTCATTGTATCATATTTT+AGG - chr2_2:54478430-54478449 Msa0258250:intron 25.0%
!! CAAAATTACACGTTTTCAAA+TGG - chr2_2:54478799-54478818 Msa0258250:intron 25.0%
!! AAATTACACGTTTTCAAATG+GGG - chr2_2:54478801-54478820 Msa0258250:intron 25.0%
!!! CGTAAAATTAAATTTTGACG+TGG - chr2_2:54478884-54478903 Msa0258250:intron 25.0%
!! TAACATTTTACCTAAATCGT+AGG + chr2_2:54479021-54479040 None:intergenic 25.0%
! AGTTTATTTCAGTTGTTAGT+TGG - chr2_2:54479329-54479348 Msa0258250:intron 25.0%
! TTCACAATGTAATTAGTTGA+TGG + chr2_2:54479604-54479623 None:intergenic 25.0%
!!! ACACCATCAACTTTTTAAAA+TGG - chr2_2:54479892-54479911 Msa0258250:intron 25.0%
! TCATGTATGTTCTTTCTTTA+TGG - chr2_2:54480184-54480203 Msa0258250:intron 25.0%
! CATGTATGTTCTTTCTTTAT+GGG - chr2_2:54480185-54480204 Msa0258250:intron 25.0%
! ATGTATGTTCTTTCTTTATG+GGG - chr2_2:54480186-54480205 Msa0258250:intron 25.0%
!!! TATTATGCTGTCTTTAGAAT+TGG - chr2_2:54480435-54480454 Msa0258250:intron 25.0%
!!! ATTATGCTGTCTTTAGAATT+GGG - chr2_2:54480436-54480455 Msa0258250:intron 25.0%
! AATAATTATTCACCCAAGAA+GGG + chr2_2:54480587-54480606 None:intergenic 25.0%
! TAATAATTATTCACCCAAGA+AGG + chr2_2:54480588-54480607 None:intergenic 25.0%
!! ATATAGGAATATTGGTTGTT+AGG + chr2_2:54480993-54481012 None:intergenic 25.0%
! AAGAATGCATATAGGAATAT+TGG + chr2_2:54481001-54481020 None:intergenic 25.0%
! ATATTCCTATATGCATTCTT+CGG - chr2_2:54481001-54481020 Msa0258250:intron 25.0%
! CTAAGAGAAGGTTTAATTAT+TGG + chr2_2:54481037-54481056 None:intergenic 25.0%
!! TAGAACTTGTTTGCAATAAT+TGG + chr2_2:54481101-54481120 None:intergenic 25.0%
!! AGTTCTACTTTGGATTTTTA+AGG - chr2_2:54481114-54481133 Msa0258250:intron 25.0%
!!! TATCATCACATTTTAATGAG+AGG + chr2_2:54481302-54481321 None:intergenic 25.0%
! AAGAAACAAAACCAGTTTAA+TGG - chr2_2:54481486-54481505 Msa0258250:intron 25.0%
! AGAAACAAAACCAGTTTAAT+GGG - chr2_2:54481487-54481506 Msa0258250:intron 25.0%
! TTCGAATATAAATATCCCTA+AGG + chr2_2:54481631-54481650 None:intergenic 25.0%
! AGATCTTATCTTACAGTTAT+TGG - chr2_2:54481764-54481783 Msa0258250:CDS 25.0%
!! TATCTTACAGTTATTGGTTA+AGG - chr2_2:54481770-54481789 Msa0258250:CDS 25.0%
!!! ATTTTTTCAAGGTGTGAATT+GGG - chr2_2:54481848-54481867 Msa0258250:CDS 25.0%
! TCTTCTTTGTCTTTAGTATA+AGG + chr2_2:54481912-54481931 None:intergenic 25.0%
! TGTCATCAATAATAATCAAC+AGG + chr2_2:54481963-54481982 None:intergenic 25.0%
! ATGGTGACAAATTAACTTAA+CGG + chr2_2:54482290-54482309 None:intergenic 25.0%
AAAATGGGTCTTTCTCAAAA+CGG + chr2_2:54476582-54476601 None:intergenic 30.0%
GTGTTACAGTTGTTGAAAAT+GGG + chr2_2:54476597-54476616 None:intergenic 30.0%
AGTGTTACAGTTGTTGAAAA+TGG + chr2_2:54476598-54476617 None:intergenic 30.0%
AGTGTGTTATGATATAAGTG+GGG + chr2_2:54476668-54476687 None:intergenic 30.0%
GAGTGTGTTATGATATAAGT+GGG + chr2_2:54476669-54476688 None:intergenic 30.0%
TGAGTGTGTTATGATATAAG+TGG + chr2_2:54476670-54476689 None:intergenic 30.0%
GAGTGAAAATAGAAACTAAG+AGG - chr2_2:54477602-54477621 Msa0258250:CDS 30.0%
GTAGATTGAAAACGGAAAAT+GGG + chr2_2:54477784-54477803 None:intergenic 30.0%
! GTACTATGTTTAGAATCAAC+CGG - chr2_2:54477853-54477872 Msa0258250:intron 30.0%
! CATTAGCAATTTTGTTAAGC+CGG + chr2_2:54477875-54477894 None:intergenic 30.0%
!! ATTAAGTTGACTTAGTAGCT+AGG - chr2_2:54478190-54478209 Msa0258250:intron 30.0%
!! TTAAGTTGACTTAGTAGCTA+GGG - chr2_2:54478191-54478210 Msa0258250:intron 30.0%
GAGGAAAATAGTACTTGTTT+AGG + chr2_2:54479306-54479325 None:intergenic 30.0%
TATTTCAGTTGTTAGTTGGT+AGG - chr2_2:54479333-54479352 Msa0258250:intron 30.0%
! ATTTCAGTTGTTAGTTGGTA+GGG - chr2_2:54479334-54479353 Msa0258250:intron 30.0%
!!! AATAGTACTTTTTTTGTGGG+CGG + chr2_2:54479386-54479405 None:intergenic 30.0%
GTGATAACAAGAGAAATAGT+TGG + chr2_2:54479424-54479443 None:intergenic 30.0%
! TTCTCTTGTTATCACACAAT+AGG - chr2_2:54479429-54479448 Msa0258250:intron 30.0%
!! ACAACATATAGTTGATGGAA+CGG + chr2_2:54479463-54479482 None:intergenic 30.0%
CTAACACAACATATAGTTGA+TGG + chr2_2:54479468-54479487 None:intergenic 30.0%
GTAAAAAAGAATTACACCGT+TGG + chr2_2:54479756-54479775 None:intergenic 30.0%
!! TTTCCTCTAAGATATGATCA+AGG + chr2_2:54479938-54479957 None:intergenic 30.0%
TGATCATATCTTAGAGGAAA+TGG - chr2_2:54479938-54479957 Msa0258250:intron 30.0%
GGATATGTTCAACCAAAATT+TGG - chr2_2:54480068-54480087 Msa0258250:intron 30.0%
! CAAACACTAGAACCAAATTT+TGG + chr2_2:54480083-54480102 None:intergenic 30.0%
CTAAATGCATAAAGAAGACT+TGG + chr2_2:54480351-54480370 None:intergenic 30.0%
TCTAAAGACAGCATAATACT+AGG + chr2_2:54480433-54480452 None:intergenic 30.0%
TAACTCTTGTGACATACTTT+AGG - chr2_2:54480535-54480554 Msa0258250:intron 30.0%
AACTCTTGTGACATACTTTA+GGG - chr2_2:54480536-54480555 Msa0258250:intron 30.0%
ATAATTATTCACCCAAGAAG+GGG + chr2_2:54480586-54480605 None:intergenic 30.0%
!! TTTTCTTTTCCTAAAGTGCT+TGG - chr2_2:54480871-54480890 Msa0258250:intron 30.0%
ATTGCAAACAAGTTCTACTT+TGG - chr2_2:54481104-54481123 Msa0258250:intron 30.0%
AATGTATTAGTTCGATCAGA+TGG - chr2_2:54481252-54481271 Msa0258250:intron 30.0%
! TTCTTCTTTCTTTTGCGTTT+TGG + chr2_2:54481471-54481490 None:intergenic 30.0%
ATTAACTCTAGCAAATATCG+TGG - chr2_2:54481692-54481711 Msa0258250:CDS 30.0%
!!! AAACACCACTCATTTTTTCA+AGG - chr2_2:54481837-54481856 Msa0258250:CDS 30.0%
!!! CATTTTTTCAAGGTGTGAAT+TGG - chr2_2:54481847-54481866 Msa0258250:CDS 30.0%
TCTTTGTCTTTAGTATAAGG+TGG + chr2_2:54481909-54481928 None:intergenic 30.0%
TAATAATCAACAGGAGTTTG+TGG + chr2_2:54481954-54481973 None:intergenic 30.0%
! GAGATGGAGGAAATAACTTT+TGG + chr2_2:54476557-54476576 None:intergenic 35.0%
AAATGGGTCTTTCTCAAAAC+GGG + chr2_2:54476581-54476600 None:intergenic 35.0%
GTTATGATATAAGTGGGGTT+GGG + chr2_2:54476663-54476682 None:intergenic 35.0%
TGTTATGATATAAGTGGGGT+TGG + chr2_2:54476664-54476683 None:intergenic 35.0%
!! ATAAGAAGGAGCTTGTTAGT+AGG - chr2_2:54477125-54477144 Msa0258250:CDS 35.0%
GCATAAAGAGTAGGCAAAAA+AGG + chr2_2:54477205-54477224 None:intergenic 35.0%
TCAATGGTAGCATAAAGAGT+AGG + chr2_2:54477214-54477233 None:intergenic 35.0%
GTGTCAGACACTAACATATA+TGG + chr2_2:54477463-54477482 None:intergenic 35.0%
GTTTGAGCTTGTATTCTTGA+TGG - chr2_2:54477562-54477581 Msa0258250:CDS 35.0%
GAAAATAGAAACTAAGAGGG+AGG - chr2_2:54477606-54477625 Msa0258250:CDS 35.0%
AATGAAAGACATGAAAGCGA+CGG - chr2_2:54477715-54477734 Msa0258250:CDS 35.0%
TGAAAACGGAAAATGGGAAA+CGG + chr2_2:54477778-54477797 None:intergenic 35.0%
CGTAGATTGAAAACGGAAAA+TGG + chr2_2:54477785-54477804 None:intergenic 35.0%
! TTTTCCGTTTTCAATCTACG+TGG - chr2_2:54477785-54477804 Msa0258250:intron 35.0%
! TTTCCGTTTTCAATCTACGT+GGG - chr2_2:54477786-54477805 Msa0258250:intron 35.0%
GGTGTTTACCCATTAAGAAT+GGG - chr2_2:54478464-54478483 Msa0258250:intron 35.0%
GTGTTTACCCATTAAGAATG+GGG - chr2_2:54478465-54478484 Msa0258250:intron 35.0%
TGTTTACCCATTAAGAATGG+GGG - chr2_2:54478466-54478485 Msa0258250:intron 35.0%
ATCACTTCTTGTAGTTCTCA+GGG - chr2_2:54478536-54478555 Msa0258250:intron 35.0%
TCAACTGTGTCATGTATTGT+GGG + chr2_2:54478602-54478621 None:intergenic 35.0%
AACACTCACTCATCATGTTT+AGG - chr2_2:54479093-54479112 Msa0258250:intron 35.0%
! ACTCATCATGTTTAGGACTT+AGG - chr2_2:54479100-54479119 Msa0258250:intron 35.0%
!! TGTTTTGAGTAAGTCTTACG+TGG - chr2_2:54479148-54479167 Msa0258250:intron 35.0%
ACAACTGAAATAAACTCACG+AGG + chr2_2:54479325-54479344 None:intergenic 35.0%
!!! ATAGTACTTTTTTTGTGGGC+GGG + chr2_2:54479385-54479404 None:intergenic 35.0%
TAAAATGGAATTATGACCCC+CGG - chr2_2:54479907-54479926 Msa0258250:intron 35.0%
GAAATCCCGCAAAAGTTTAT+GGG + chr2_2:54479981-54480000 None:intergenic 35.0%
AGAAATCCCGCAAAAGTTTA+TGG + chr2_2:54479982-54480001 None:intergenic 35.0%
! ATAAACTTTTGCGGGATTTC+TGG - chr2_2:54479981-54480000 Msa0258250:intron 35.0%
GGTTGAACATATCCCAATAT+GGG + chr2_2:54480062-54480081 None:intergenic 35.0%
TGGTTGAACATATCCCAATA+TGG + chr2_2:54480063-54480082 None:intergenic 35.0%
!! TAGCTTTAGATGATTGTACG+TGG - chr2_2:54480281-54480300 Msa0258250:intron 35.0%
!!! TTGCTTGCTTTCATTGGTTT+TGG + chr2_2:54480325-54480344 None:intergenic 35.0%
TAATTATTCACCCAAGAAGG+GGG + chr2_2:54480585-54480604 None:intergenic 35.0%
!! ATTCTTAACTTGTGCCCTTA+AGG - chr2_2:54480755-54480774 Msa0258250:intron 35.0%
!! TTCTTAACTTGTGCCCTTAA+GGG - chr2_2:54480756-54480775 Msa0258250:intron 35.0%
TCTGATCCTCATGATTCATT+CGG - chr2_2:54480958-54480977 Msa0258250:intron 35.0%
! GGAATATTGGTTGTTAGGTT+AGG + chr2_2:54480988-54481007 None:intergenic 35.0%
ATGATCCGAAGAATGCATAT+AGG + chr2_2:54481009-54481028 None:intergenic 35.0%
TCTATCTCTAAGCTAAGAGA+AGG + chr2_2:54481049-54481068 None:intergenic 35.0%
ACTTGAATACCTTCACATGT+TGG - chr2_2:54481200-54481219 Msa0258250:intron 35.0%
CTTGAATACCTTCACATGTT+GGG - chr2_2:54481201-54481220 Msa0258250:intron 35.0%
GATCGAACTAATACATTCTC+AGG + chr2_2:54481249-54481268 None:intergenic 35.0%
CAAAGTCTGTGAGCATTATA+TGG + chr2_2:54481278-54481297 None:intergenic 35.0%
TTGGAGATTATTATCTGAGC+TGG + chr2_2:54481333-54481352 None:intergenic 35.0%
!! TACTTGAGGAGAGTTTTGAT+TGG + chr2_2:54481352-54481371 None:intergenic 35.0%
AAATTGTGAGTGTTCACTGT+GGG + chr2_2:54481391-54481410 None:intergenic 35.0%
!! TCTTTCTTTTGCGTTTTGGT+TGG + chr2_2:54481467-54481486 None:intergenic 35.0%
TCATTATCCAAGCCTCTAAA+AGG + chr2_2:54481672-54481691 None:intergenic 35.0%
! TAAGATAAGATCTTTTGCCG+TGG + chr2_2:54481757-54481776 None:intergenic 35.0%
AAGAAGGCTAGGATCAATAA+TGG - chr2_2:54481800-54481819 Msa0258250:CDS 35.0%
AGAAGGCTAGGATCAATAAT+GGG - chr2_2:54481801-54481820 Msa0258250:CDS 35.0%
TCACACCTTGAAAAAATGAG+TGG + chr2_2:54481845-54481864 None:intergenic 35.0%
!! TATAAGGTGGTGGAACATAA+GGG + chr2_2:54481896-54481915 None:intergenic 35.0%
TTGTCTTTAGTATAAGGTGG+TGG + chr2_2:54481906-54481925 None:intergenic 35.0%
TATCTTAAACGTGTGAATGC+TGG + chr2_2:54482015-54482034 None:intergenic 35.0%
ATCCTTATTGCGTAAATACG+TGG - chr2_2:54482150-54482169 Msa0258250:CDS 35.0%
TTCCACGTATTTACGCAATA+AGG + chr2_2:54482155-54482174 None:intergenic 35.0%
TTAGCTAGCTAGTTGAATTC+AGG - chr2_2:54482224-54482243 Msa0258250:five_prime_UTR 35.0%
TAGCTAGCTAGTTGAATTCA+GGG - chr2_2:54482225-54482244 Msa0258250:five_prime_UTR 35.0%
CAAGCTCAATCAACATAGTT+TGG + chr2_2:54482365-54482384 None:intergenic 35.0%
AATGGGTCTTTCTCAAAACG+GGG + chr2_2:54476580-54476599 None:intergenic 40.0%
AAGGAGAGAGTGAGAGTAAA+CGG + chr2_2:54476628-54476647 None:intergenic 40.0%
ATATAAGTGGGGTTGGGAAT+GGG + chr2_2:54476657-54476676 None:intergenic 40.0%
!! CAACGATGATGGAAAGATTC+CGG - chr2_2:54477078-54477097 Msa0258250:CDS 40.0%
CTTGTTAGTAGGAGTAAGGA+AGG - chr2_2:54477136-54477155 Msa0258250:CDS 40.0%
!! GAAATGGCTCTGTCTTTTGA+CGG - chr2_2:54477240-54477259 Msa0258250:CDS 40.0%
!! AAATGGAAGTGCTTACCTGA+CGG + chr2_2:54477335-54477354 None:intergenic 40.0%
AATAGAAACTAAGAGGGAGG+AGG - chr2_2:54477609-54477628 Msa0258250:CDS 40.0%
ATAGAAACTAAGAGGGAGGA+GGG - chr2_2:54477610-54477629 Msa0258250:CDS 40.0%
TACTTCTAGATTTCCACCGT+AGG + chr2_2:54477663-54477682 None:intergenic 40.0%
AAAATGGGAAACGGTGGTTA+TGG + chr2_2:54477769-54477788 None:intergenic 40.0%
AAGTGAAGGTGACATAAGGT+GGG + chr2_2:54477813-54477832 None:intergenic 40.0%
AGACAAGTGAAGGTGACATA+AGG + chr2_2:54477817-54477836 None:intergenic 40.0%
TAATTCCAGCAGACAAGTGA+AGG + chr2_2:54477827-54477846 None:intergenic 40.0%
GGGTGTTTACCCATTAAGAA+TGG - chr2_2:54478463-54478482 Msa0258250:intron 40.0%
AAGCAACCCCCATTCTTAAT+GGG + chr2_2:54478475-54478494 None:intergenic 40.0%
TAAGCAACCCCCATTCTTAA+TGG + chr2_2:54478476-54478495 None:intergenic 40.0%
TAAGAATGGGGGTTGCTTAA+TGG - chr2_2:54478477-54478496 Msa0258250:intron 40.0%
CATCACTTCTTGTAGTTCTC+AGG - chr2_2:54478535-54478554 Msa0258250:intron 40.0%
GTCAACTGTGTCATGTATTG+TGG + chr2_2:54478603-54478622 None:intergenic 40.0%
AGATGTCGTTAGATTCGTCT+CGG + chr2_2:54478720-54478739 None:intergenic 40.0%
! TTCAAATGGGGCATCTATTG+CGG - chr2_2:54478813-54478832 Msa0258250:intron 40.0%
ACACACATCACGGAATCATA+CGG + chr2_2:54478934-54478953 None:intergenic 40.0%
CATTCATGTGCCTACGATTT+AGG - chr2_2:54479008-54479027 Msa0258250:intron 40.0%
AGTCTTACGTGGTCAGATTT+AGG - chr2_2:54479159-54479178 Msa0258250:intron 40.0%
AGATATGATCAAGGCTGATC+CGG + chr2_2:54479929-54479948 None:intergenic 40.0%
CAGCCTTGATCATATCTTAG+AGG - chr2_2:54479932-54479951 Msa0258250:intron 40.0%
! CCTAGACCCATAAACTTTTG+CGG - chr2_2:54479972-54479991 Msa0258250:intron 40.0%
! CTAGACCCATAAACTTTTGC+GGG - chr2_2:54479973-54479992 Msa0258250:intron 40.0%
! TGGCTTTTGCTTGCTTTCAT+TGG + chr2_2:54480331-54480350 None:intergenic 40.0%
AATTATTCACCCAAGAAGGG+GGG + chr2_2:54480584-54480603 None:intergenic 40.0%
!! GTGTTAACTTGTGCCCTTAA+GGG + chr2_2:54480772-54480791 None:intergenic 40.0%
!! AGTGTTAACTTGTGCCCTTA+AGG + chr2_2:54480773-54480792 None:intergenic 40.0%
!! TTTCCTAAAGTGCTTGGTGT+TGG - chr2_2:54480877-54480896 Msa0258250:intron 40.0%
AGTAGTCGCCCAAAGTTATA+CGG - chr2_2:54480915-54480934 Msa0258250:intron 40.0%
TCGTCTTGCCGTATAACTTT+GGG + chr2_2:54480926-54480945 None:intergenic 40.0%
ATCGTCTTGCCGTATAACTT+TGG + chr2_2:54480927-54480946 None:intergenic 40.0%
TGAATCATGAGGATCAGACA+GGG + chr2_2:54480956-54480975 None:intergenic 40.0%
ATGAATCATGAGGATCAGAC+AGG + chr2_2:54480957-54480976 None:intergenic 40.0%
ATCCTCATGATTCATTCGGT+AGG - chr2_2:54480962-54480981 Msa0258250:intron 40.0%
ATGCATTCTTCGGATCATGT+TGG - chr2_2:54481011-54481030 Msa0258250:intron 40.0%
!! CTATGCATCAGAAGTGTTGA+TGG - chr2_2:54481176-54481195 Msa0258250:intron 40.0%
ACACTATTCCCAACATGTGA+AGG + chr2_2:54481212-54481231 None:intergenic 40.0%
GATTATTATCTGAGCTGGTG+TGG + chr2_2:54481328-54481347 None:intergenic 40.0%
!!! TGTTCACTGTGGGGATTTTT+TGG + chr2_2:54481381-54481400 None:intergenic 40.0%
AATTGTGAGTGTTCACTGTG+GGG + chr2_2:54481390-54481409 None:intergenic 40.0%
CAAATTGTGAGTGTTCACTG+TGG + chr2_2:54481392-54481411 None:intergenic 40.0%
TTCAGGAGCTAAGTATTCGT+GGG + chr2_2:54481565-54481584 None:intergenic 40.0%
TTTCAGGAGCTAAGTATTCG+TGG + chr2_2:54481566-54481585 None:intergenic 40.0%
TTAGCTCCTGAAATAGTGTC+TGG - chr2_2:54481573-54481592 Msa0258250:intron 40.0%
!!! TATGGTGTCACACCTTTTAG+AGG - chr2_2:54481657-54481676 Msa0258250:CDS 40.0%
GAAGGCTAGGATCAATAATG+GGG - chr2_2:54481802-54481821 Msa0258250:CDS 40.0%
AAGGCTAGGATCAATAATGG+GGG - chr2_2:54481803-54481822 Msa0258250:CDS 40.0%
!! GTGTGAATTGGGCTTTGTTA+AGG - chr2_2:54481859-54481878 Msa0258250:CDS 40.0%
!! ATAAGGTGGTGGAACATAAG+GGG + chr2_2:54481895-54481914 None:intergenic 40.0%
!! GTATAAGGTGGTGGAACATA+AGG + chr2_2:54481897-54481916 None:intergenic 40.0%
ACGCAATAAGGATATCAGTG+TGG + chr2_2:54482143-54482162 None:intergenic 40.0%
ATGGGTCTTTCTCAAAACGG+GGG + chr2_2:54476579-54476598 None:intergenic 45.0%
GATATAAGTGGGGTTGGGAA+TGG + chr2_2:54476658-54476677 None:intergenic 45.0%
AAAGATTCCGGCGATGTTTG+CGG - chr2_2:54477090-54477109 Msa0258250:CDS 45.0%
!! GGCGAAAGTGATGGATAAGA+AGG - chr2_2:54477111-54477130 Msa0258250:CDS 45.0%
!! GGAGCTTGTTAGTAGGAGTA+AGG - chr2_2:54477132-54477151 Msa0258250:CDS 45.0%
TAAGGAAGGAAGAGCGAAGA+CGG - chr2_2:54477150-54477169 Msa0258250:CDS 45.0%
CTACCATTGATGCTGCGAAA+TGG - chr2_2:54477224-54477243 Msa0258250:CDS 45.0%
!! CTTTTGACGGAGTTTTGTCC+TGG - chr2_2:54477253-54477272 Msa0258250:CDS 45.0%
! GAGCTTGTATTCTTGATGGC+TGG - chr2_2:54477566-54477585 Msa0258250:CDS 45.0%
! TATTCTTGATGGCTGGAGTG+AGG - chr2_2:54477573-54477592 Msa0258250:CDS 45.0%
! ATTCTTGATGGCTGGAGTGA+GGG - chr2_2:54477574-54477593 Msa0258250:CDS 45.0%
TAGAAACTAAGAGGGAGGAG+GGG - chr2_2:54477611-54477630 Msa0258250:CDS 45.0%
GGAATGTGCAGAAGATCCTA+CGG - chr2_2:54477644-54477663 Msa0258250:CDS 45.0%
AAACGGAAAATGGGAAACGG+TGG + chr2_2:54477775-54477794 None:intergenic 45.0%
GGTCCCACGTAGATTGAAAA+CGG + chr2_2:54477792-54477811 None:intergenic 45.0%
CAAGTGAAGGTGACATAAGG+TGG + chr2_2:54477814-54477833 None:intergenic 45.0%
! AGTTGACTTAGTAGCTAGGG+TGG - chr2_2:54478194-54478213 Msa0258250:intron 45.0%
CTGTGTCATGTATTGTGGGA+CGG + chr2_2:54478598-54478617 None:intergenic 45.0%
! TCAAATGGGGCATCTATTGC+GGG - chr2_2:54478814-54478833 Msa0258250:intron 45.0%
CGGTTAAAGTAAGCCAAAGC+TGG + chr2_2:54478914-54478933 None:intergenic 45.0%
GTGCTATCTCACACACATCA+CGG + chr2_2:54478944-54478963 None:intergenic 45.0%
GTCAAAAAAGACACCTACCG+AGG - chr2_2:54479051-54479070 Msa0258250:intron 45.0%
ATATGATCAAGGCTGATCCG+GGG + chr2_2:54479927-54479946 None:intergenic 45.0%
GATATGATCAAGGCTGATCC+GGG + chr2_2:54479928-54479947 None:intergenic 45.0%
CCGCAAAAGTTTATGGGTCT+AGG + chr2_2:54479975-54479994 None:intergenic 45.0%
GAGAGGTTAAGATCTTGACG+TGG - chr2_2:54480035-54480054 Msa0258250:intron 45.0%
ATCTTGACGTGGTCCCATAT+TGG - chr2_2:54480046-54480065 Msa0258250:intron 45.0%
TCTTGACGTGGTCCCATATT+GGG - chr2_2:54480047-54480066 Msa0258250:intron 45.0%
TGACAAACAGAGCAAAGAGC+TGG + chr2_2:54480476-54480495 None:intergenic 45.0%
AATGTCTTTCCCCCCTTCTT+GGG - chr2_2:54480572-54480591 Msa0258250:intron 45.0%
CGACTACTCCATTGCTTGTT+TGG + chr2_2:54480903-54480922 None:intergenic 45.0%
CATTCTCAGGCTTCAGATCA+CGG + chr2_2:54481236-54481255 None:intergenic 45.0%
!!! TTTTTTGGTGGGGCTACTTG+AGG + chr2_2:54481366-54481385 None:intergenic 45.0%
!!! ACTGTGGGGATTTTTTGGTG+GGG + chr2_2:54481376-54481395 None:intergenic 45.0%
!!! CACTGTGGGGATTTTTTGGT+GGG + chr2_2:54481377-54481396 None:intergenic 45.0%
!!! TCACTGTGGGGATTTTTTGG+TGG + chr2_2:54481378-54481397 None:intergenic 45.0%
GGGTATTATGCACGAAGATG+AGG + chr2_2:54481415-54481434 None:intergenic 45.0%
ACTGCTGGGACTATACAGTT+GGG + chr2_2:54481435-54481454 None:intergenic 45.0%
GTTGGAAACAAGACACTGCT+GGG + chr2_2:54481449-54481468 None:intergenic 45.0%
CAAACTCAGGCCCATTAAAC+TGG + chr2_2:54481500-54481519 None:intergenic 45.0%
TTGCTGAGCCCATTGATGTT+AGG - chr2_2:54481520-54481539 Msa0258250:intron 45.0%
TCCTGAAATAGTGTCTGGTG+AGG - chr2_2:54481578-54481597 Msa0258250:intron 45.0%
CCTGAAATAGTGTCTGGTGA+GGG - chr2_2:54481579-54481598 Msa0258250:intron 45.0%
!! TGTCACACCTTTTAGAGGCT+TGG - chr2_2:54481662-54481681 Msa0258250:CDS 45.0%
AAATATCGTGGCTCGAGCTT+TGG - chr2_2:54481704-54481723 Msa0258250:CDS 45.0%
! ATAAGATCTTTTGCCGTGGC+TGG + chr2_2:54481753-54481772 None:intergenic 45.0%
! TTGATCCTAGCCTTCTTGCT+GGG + chr2_2:54481797-54481816 None:intergenic 45.0%
! ATTGATCCTAGCCTTCTTGC+TGG + chr2_2:54481798-54481817 None:intergenic 45.0%
!! TAAGGTGGTGGAACATAAGG+GGG + chr2_2:54481894-54481913 None:intergenic 45.0%
AGGAGAGCTTGTATTCCACA+TGG - chr2_2:54481985-54482004 Msa0258250:CDS 45.0%
! GTGAATGCTGGTTATCCATG+TGG + chr2_2:54482003-54482022 None:intergenic 45.0%
TTCCTCCTTCTATTGCGATC+CGG + chr2_2:54482195-54482214 None:intergenic 45.0%
!!! TTCTAAATTATATTTTTTTT+TGG + chr2_2:54479668-54479687 None:intergenic 5.0%
!!! AATTAATTTTATATTTTTAG+AGG - chr2_2:54480832-54480851 Msa0258250:intron 5.0%
CTTTCTCAAAACGGGGGAGA+TGG + chr2_2:54476573-54476592 None:intergenic 50.0%
AGAGTGAGAGTAAACGGAGG+TGG + chr2_2:54476622-54476641 None:intergenic 50.0%
GAGAGAGTGAGAGTAAACGG+AGG + chr2_2:54476625-54476644 None:intergenic 50.0%
!! GGTTGGGAATGGGTTGAAGA+AGG + chr2_2:54476647-54476666 None:intergenic 50.0%
TAGACACAACGCCAACGCAA+TGG - chr2_2:54476730-54476749 Msa0258250:three_prime_UTR 50.0%
TTGTTGTGGAGGCGAAGCTT+AGG + chr2_2:54476793-54476812 None:intergenic 50.0%
GCTTGTGCTGCGTTTGATGT+CGG + chr2_2:54476834-54476853 None:intergenic 50.0%
TCAACCTCTGCTCATCTCTC+CGG - chr2_2:54476866-54476885 Msa0258250:three_prime_UTR 50.0%
!! TGATGTTTGGTGGTGGTTGG+AGG + chr2_2:54476917-54476936 None:intergenic 50.0%
! TTCGGATTGGATCCGGTGAA+TGG + chr2_2:54476969-54476988 None:intergenic 50.0%
! AAGGGGATTCGGATTGGATC+CGG + chr2_2:54476976-54476995 None:intergenic 50.0%
CATCATCGTTGAGTTCAGCG+AGG + chr2_2:54477069-54477088 None:intergenic 50.0%
CTCGCTGAACTCAACGATGA+TGG - chr2_2:54477067-54477086 Msa0258250:CDS 50.0%
GATGTTTGCGGCGAAAGTGA+TGG - chr2_2:54477102-54477121 Msa0258250:CDS 50.0%
GAGCCATTTCGCAGCATCAA+TGG + chr2_2:54477230-54477249 None:intergenic 50.0%
!! TTGACGGAGTTTTGTCCTGG+CGG - chr2_2:54477256-54477275 Msa0258250:CDS 50.0%
ATCTTCACGTTCTCCGGCAA+CGG - chr2_2:54477281-54477300 Msa0258250:CDS 50.0%
!!! GTTTGTTTTGCTGCCGTTGC+CGG + chr2_2:54477297-54477316 None:intergenic 50.0%
GGCAACGGCAGCAAAACAAA+CGG - chr2_2:54477296-54477315 Msa0258250:CDS 50.0%
CTCAAACGCTGGTACACTTC+AGG - chr2_2:54477419-54477438 Msa0258250:CDS 50.0%
AACGCTGGTACACTTCAGGT+TGG - chr2_2:54477423-54477442 Msa0258250:CDS 50.0%
ATGTGCAGAAGATCCTACGG+TGG - chr2_2:54477647-54477666 Msa0258250:CDS 50.0%
TGTCACCTTCACTTGTCTGC+TGG - chr2_2:54477819-54477838 Msa0258250:intron 50.0%
GTCATGTATTGTGGGACGGA+GGG + chr2_2:54478594-54478613 None:intergenic 50.0%
TGTCATGTATTGTGGGACGG+AGG + chr2_2:54478595-54478614 None:intergenic 50.0%
TTGACGTGGCTTTCCAGCTT+TGG - chr2_2:54478898-54478917 Msa0258250:intron 50.0%
GTGTGAGATAGCACGTGTGT+TGG - chr2_2:54478950-54478969 Msa0258250:intron 50.0%
!! TGAGTAGTGAGTGCTGACCT+CGG + chr2_2:54479071-54479090 None:intergenic 50.0%
TATGATCAAGGCTGATCCGG+GGG + chr2_2:54479926-54479945 None:intergenic 50.0%
CAATGTCTTTCCCCCCTTCT+TGG - chr2_2:54480571-54480590 Msa0258250:intron 50.0%
TGGCCAACACCAAGCACTTT+AGG + chr2_2:54480883-54480902 None:intergenic 50.0%
!! GGTGTTGGCCAAACAAGCAA+TGG - chr2_2:54480892-54480911 Msa0258250:intron 50.0%
GGCCTACCGAATGAATCATG+AGG + chr2_2:54480967-54480986 None:intergenic 50.0%
CACTGCTGGGACTATACAGT+TGG + chr2_2:54481436-54481455 None:intergenic 50.0%
GGTTGGAAACAAGACACTGC+TGG + chr2_2:54481450-54481469 None:intergenic 50.0%
ATGGGCTCAGCAACAAACTC+AGG + chr2_2:54481513-54481532 None:intergenic 50.0%
CCCTCACCAGACACTATTTC+AGG + chr2_2:54481582-54481601 None:intergenic 50.0%
ATAGTGTCTGGTGAGGGACA+TGG - chr2_2:54481585-54481604 Msa0258250:intron 50.0%
! GACATGGTAGTGCTGTGGAT+TGG - chr2_2:54481601-54481620 Msa0258250:intron 50.0%
!! ATGGTAGTGCTGTGGATTGG+TGG - chr2_2:54481604-54481623 Msa0258250:intron 50.0%
!! CTGTGGATTGGTGGACCTTA+GGG - chr2_2:54481613-54481632 Msa0258250:intron 50.0%
!! TCGAGCTTTGGAGTTCCCAA+AGG - chr2_2:54481716-54481735 Msa0258250:CDS 50.0%
TGGTTAAGGACCCAGCAAGA+AGG - chr2_2:54481784-54481803 Msa0258250:CDS 50.0%
TCTCAAAACGGGGGAGATGG+AGG + chr2_2:54476570-54476589 None:intergenic 55.0%
TCGGTTAGATCGTCGAGCCA+CGG + chr2_2:54476758-54476777 None:intergenic 55.0%
GACAGTGGTGGTTGTTGTGG+AGG + chr2_2:54476804-54476823 None:intergenic 55.0%
GGTGACAGTGGTGGTTGTTG+TGG + chr2_2:54476807-54476826 None:intergenic 55.0%
TGTGCTGCGTTTGATGTCGG+CGG + chr2_2:54476831-54476850 None:intergenic 55.0%
GGAGAGATGAGCAGAGGTTG+AGG + chr2_2:54476867-54476886 None:intergenic 55.0%
!! TGTTTGGTGGTGGTTGGAGG+AGG + chr2_2:54476914-54476933 None:intergenic 55.0%
!! GCGTGATGTTTGGTGGTGGT+TGG + chr2_2:54476920-54476939 None:intergenic 55.0%
! AGGAGCGTGATGTTTGGTGG+TGG + chr2_2:54476924-54476943 None:intergenic 55.0%
! GGAAGGAGCGTGATGTTTGG+TGG + chr2_2:54476927-54476946 None:intergenic 55.0%
! GGAGGAAGGAGCGTGATGTT+TGG + chr2_2:54476930-54476949 None:intergenic 55.0%
GGATTGGATCCGGTGAATGG+CGG + chr2_2:54476966-54476985 None:intergenic 55.0%
GACGAGAAGGGGATTCGGAT+TGG + chr2_2:54476982-54477001 None:intergenic 55.0%
GATGCGACGAGAAGGGGATT+CGG + chr2_2:54476987-54477006 None:intergenic 55.0%
GTAGACAGAGCTGATGTCGC+CGG + chr2_2:54477047-54477066 None:intergenic 55.0%
ACTTTCGCCGCAAACATCGC+CGG + chr2_2:54477100-54477119 None:intergenic 55.0%
AGAACGTGAAGATCACCGCC+AGG + chr2_2:54477274-54477293 None:intergenic 55.0%
GCGGTGATCTTCACGTTCTC+CGG - chr2_2:54477275-54477294 Msa0258250:CDS 55.0%
GGTTCAATGAATCCGCCGTC+AGG - chr2_2:54477317-54477336 Msa0258250:CDS 55.0%
!! TGGAAGTGCTTACCTGACGG+CGG + chr2_2:54477332-54477351 None:intergenic 55.0%
CAGCGTTTGAGCTCTCACGA+CGG + chr2_2:54477410-54477429 None:intergenic 55.0%
! ATGGGGCATCTATTGCGGGA+CGG - chr2_2:54478818-54478837 Msa0258250:intron 55.0%
!! TAGTGAGTGCTGACCTCGGT+AGG + chr2_2:54479067-54479086 None:intergenic 55.0%
! TGAGGGACATGGTAGTGCTG+TGG - chr2_2:54481596-54481615 Msa0258250:intron 55.0%
!! GCTGTGGATTGGTGGACCTT+AGG - chr2_2:54481612-54481631 Msa0258250:intron 55.0%
! ATCTTTTGCCGTGGCTGGCA+CGG + chr2_2:54481748-54481767 None:intergenic 55.0%
AAGGACCCAGCAAGAAGGCT+AGG - chr2_2:54481789-54481808 Msa0258250:CDS 55.0%
AGCCGGATCGCAATAGAAGG+AGG - chr2_2:54482190-54482209 Msa0258250:exon 55.0%
CGGTTAGATCGTCGAGCCAC+GGG + chr2_2:54476757-54476776 None:intergenic 60.0%
!! GCTTAGGCTCTGGAGGTCGT+CGG + chr2_2:54476777-54476796 None:intergenic 60.0%
! AGGCGAAGCTTAGGCTCTGG+AGG + chr2_2:54476784-54476803 None:intergenic 60.0%
TGGAGGCGAAGCTTAGGCTC+TGG + chr2_2:54476787-54476806 None:intergenic 60.0%
TCGACCGGAGAGATGAGCAG+AGG + chr2_2:54476873-54476892 None:intergenic 60.0%
AGGGAAGGGAAGGGATCGAC+CGG + chr2_2:54476888-54476907 None:intergenic 60.0%
AGGAGGAGGAGGGAAGGGAA+GGG + chr2_2:54476897-54476916 None:intergenic 60.0%
GTTGGAGGAGGAGGAGGGAA+GGG + chr2_2:54476902-54476921 None:intergenic 60.0%
TGGTGGTTGGAGGAGGAGGA+GGG + chr2_2:54476907-54476926 None:intergenic 60.0%
!! TTGGTGGTGGTTGGAGGAGG+AGG + chr2_2:54476911-54476930 None:intergenic 60.0%
AGGGGAGGATGCGACGAGAA+GGG + chr2_2:54476994-54477013 None:intergenic 60.0%
CGTCGTGAGAGCTCAAACGC+TGG - chr2_2:54477408-54477427 Msa0258250:CDS 60.0%
CTAAGAGGGAGGAGGGGATC+AGG - chr2_2:54477617-54477636 Msa0258250:CDS 60.0%
GGCATCTATTGCGGGACGGA+GGG - chr2_2:54478822-54478841 Msa0258250:intron 60.0%
! CTGGCACGGTGGGTTCCTTT+GGG + chr2_2:54481734-54481753 None:intergenic 60.0%
ATACGTGGAAACCCGACCGC+AGG - chr2_2:54482165-54482184 Msa0258250:CDS 60.0%
TACGTGGAAACCCGACCGCA+GGG - chr2_2:54482166-54482185 Msa0258250:CDS 60.0%
GGGAGCCGGATCGCAATAGA+AGG - chr2_2:54482187-54482206 Msa0258250:CDS 60.0%
ACGCCAACGCAATGGACCCG+TGG - chr2_2:54476738-54476757 Msa0258250:three_prime_UTR 65.0%
GAGCCACGGGTCCATTGCGT+TGG + chr2_2:54476744-54476763 None:intergenic 65.0%
GATGTCGGCGGTGGTGACAG+TGG + chr2_2:54476819-54476838 None:intergenic 65.0%
GCTGCGTTTGATGTCGGCGG+TGG + chr2_2:54476828-54476847 None:intergenic 65.0%
GAGGAGGAGGAGGGAAGGGA+AGG + chr2_2:54476898-54476917 None:intergenic 65.0%
GGTTGGAGGAGGAGGAGGGA+AGG + chr2_2:54476903-54476922 None:intergenic 65.0%
GTGGTGGTTGGAGGAGGAGG+AGG + chr2_2:54476908-54476927 None:intergenic 65.0%
!! AATGGCGGACCAGCGTGGGT+CGG + chr2_2:54476951-54476970 None:intergenic 65.0%
!! GGTGAATGGCGGACCAGCGT+GGG + chr2_2:54476955-54476974 None:intergenic 65.0%
CACGCTGGTCCGCCATTCAC+CGG - chr2_2:54476954-54476973 Msa0258250:three_prime_UTR 65.0%
GGGGAGGATGCGACGAGAAG+GGG + chr2_2:54476993-54477012 None:intergenic 65.0%
GAGGGGAGGATGCGACGAGA+AGG + chr2_2:54476995-54477014 None:intergenic 65.0%
TGATGTCGCCGGAGCCGAGA+CGG + chr2_2:54477036-54477055 None:intergenic 65.0%
AGGGAGGAGGGGATCAGGTG+TGG - chr2_2:54477622-54477641 Msa0258250:CDS 65.0%
GGGAGGAGGGGATCAGGTGT+GGG - chr2_2:54477623-54477642 Msa0258250:CDS 65.0%
GGGCATCTATTGCGGGACGG+AGG - chr2_2:54478821-54478840 Msa0258250:intron 65.0%
! GCTGGCACGGTGGGTTCCTT+TGG + chr2_2:54481735-54481754 None:intergenic 65.0%
TTTGCCGTGGCTGGCACGGT+GGG + chr2_2:54481744-54481763 None:intergenic 65.0%
! TTTTGCCGTGGCTGGCACGG+TGG + chr2_2:54481745-54481764 None:intergenic 65.0%
ACGTGGAAACCCGACCGCAG+GGG - chr2_2:54482167-54482186 Msa0258250:CDS 65.0%
ATTGCGATCCGGCTCCCCTG+CGG + chr2_2:54482184-54482203 None:intergenic 65.0%
GTCGGCGGTGGTGACAGTGG+TGG + chr2_2:54476816-54476835 None:intergenic 70.0%
CTCCTTCCTCCGACCCACGC+TGG - chr2_2:54476939-54476958 Msa0258250:three_prime_UTR 70.0%
GACCAGCGTGGGTCGGAGGA+AGG + chr2_2:54476944-54476963 None:intergenic 70.0%
!! CGGTGAATGGCGGACCAGCG+TGG + chr2_2:54476956-54476975 None:intergenic 70.0%
AGAAGCGGAGGTCGGAGGGG+AGG + chr2_2:54477009-54477028 None:intergenic 70.0%
GGGAGAAGCGGAGGTCGGAG+GGG + chr2_2:54477012-54477031 None:intergenic 70.0%
CGGGAGAAGCGGAGGTCGGA+GGG + chr2_2:54477013-54477032 None:intergenic 70.0%
ACGGCGGGAGAAGCGGAGGT+CGG + chr2_2:54477017-54477036 None:intergenic 70.0%
CTCCGCTTCTCCCGCCGTCT+CGG - chr2_2:54477019-54477038 Msa0258250:CDS 70.0%
AGCCGAGACGGCGGGAGAAG+CGG + chr2_2:54477024-54477043 None:intergenic 70.0%
TTCTCCCGCCGTCTCGGCTC+CGG - chr2_2:54477025-54477044 Msa0258250:CDS 70.0%
GGAACCCACCGTGCCAGCCA+CGG - chr2_2:54481737-54481756 Msa0258250:CDS 70.0%
AAACCCGACCGCAGGGGAGC+CGG - chr2_2:54482173-54482192 Msa0258250:CDS 70.0%
GCGGGAGAAGCGGAGGTCGG+AGG + chr2_2:54477014-54477033 None:intergenic 75.0%
CGAGACGGCGGGAGAAGCGG+AGG + chr2_2:54477021-54477040 None:intergenic 75.0%
TGTCGCCGGAGCCGAGACGG+CGG + chr2_2:54477033-54477052 None:intergenic 75.0%
GATCCGGCTCCCCTGCGGTC+GGG + chr2_2:54482179-54482198 None:intergenic 75.0%
CGATCCGGCTCCCCTGCGGT+CGG + chr2_2:54482180-54482199 None:intergenic 75.0%
! GGCGGACCAGCGTGGGTCGG+AGG + chr2_2:54476948-54476967 None:intergenic 80.0%
! GTCGCCGGAGCCGAGACGGC+GGG + chr2_2:54477032-54477051 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 54476547 54482410 54476547 ID=Msa0258250;Name=Msa0258250
chr2_2 mRNA 54476547 54482410 54476547 ID=Msa0258250-mRNA-1;Parent=Msa0258250;Name=Msa0258250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=202|1|1|1|1|1|2|433|464
chr2_2 exon 54476547 54477784 54476547 ID=Msa0258250-mRNA-1:exon:16365;Parent=Msa0258250-mRNA-1
chr2_2 exon 54481619 54482410 54481619 ID=Msa0258250-mRNA-1:exon:16364;Parent=Msa0258250-mRNA-1
chr2_2 five_prime_UTR 54482209 54482410 54482209 ID=Msa0258250-mRNA-1:five_prime_utr;Parent=Msa0258250-mRNA-1
chr2_2 CDS 54481619 54482208 54481619 ID=Msa0258250-mRNA-1:cds;Parent=Msa0258250-mRNA-1
chr2_2 CDS 54476980 54477784 54476980 ID=Msa0258250-mRNA-1:cds;Parent=Msa0258250-mRNA-1
chr2_2 three_prime_UTR 54476547 54476979 54476547 ID=Msa0258250-mRNA-1:three_prime_utr;Parent=Msa0258250-mRNA-1
Gene Sequence

>Msa0258250

ATGGACCCGTGGCTCGACGATCTAACCGACGACCTCCAGAGCCTAAGCTTCGCCTCCACAACAACCACCACTGTCACCACCGCCGACATCAAACGCAGCACAAGCTTCAGTTCATCCTCAACCTCTGCTCATCTCTCCGGTCGATCCCTTCCCTTCCCTCCTCCTCCTCCAACCACCACCAAACATCACGCTCCTTCCTCCGACCCACGCTGGTCCGCCATTCACCGGATCCAATCCGAATCCCCTTCTCGTCGCATCCTCCCCTCCGACCTCCGCTTCTCCCGCCGTCTCGGCTCCGGCGACATCAGCTCTGTCTACCTCGCTGAACTCAACGATGATGGAAAGATTCCGGCGATGTTTGCGGCGAAAGTGATGGATAAGAAGGAGCTTGTTAGTAGGAGTAAGGAAGGAAGAGCGAAGACGGAGAGAGAAATACTTGAATCTCTTGATCATCCTTTTTTGCCTACTCTTTATGCTACCATTGATGCTGCGAAATGGCTCTGTCTTTTGACGGAGTTTTGTCCTGGCGGTGATCTTCACGTTCTCCGGCAACGGCAGCAAAACAAACGGTTCAATGAATCCGCCGTCAGATTCTATGCATCAGAAGTGTTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTGTACCGTGATCTGAAGCCTGAGAATGTATTAGTTCGATCAGATGGCCATATAATGCTCACAGACTTTGACCTCTCATTAAAATGTGATGATAGTTCCACACCAGCTCAGATAATAATCTCCAATCAAAACTCTCCTCAAGTAGCCCCACCAAAAAATCCCCACAGTGAACACTCACAATTTGCCTCATCTTCGTGCATAATACCCAACTGTATAGTCCCAGCAGTGTCTTGTTTCCAACCAAAACGCAAAAGAAAGAAGAAACAAAACCAGTTTAATGGGCCTGAGTTTGTTGCTGAGCCCATTGATGTTAGGTCCATGTCATTTGTTGGGACCCACGAATACTTAGCTCCTGAAATAGTGTCTGGTGAGGGACATGGTAGTGCTGTGGATTGGTGGACCTTAGGGATATTTATATTCGAATTATTTTATGGTGTCACACCTTTTAGAGGCTTGGATAATGAATTAACTCTAGCAAATATCGTGGCTCGAGCTTTGGAGTTCCCAAAGGAACCCACCGTGCCAGCCACGGCAAAAGATCTTATCTTACAGTTATTGGTTAAGGACCCAGCAAGAAGGCTAGGATCAATAATGGGGGCTTCTGCAATCAAACACCACTCATTTTTTCAAGGTGTGAATTGGGCTTTGTTAAGGTGTACAACTCCCCCTTATGTTCCACCACCTTATACTAAAGACAAAGAAGATGTTTCTGATGATAGTTGTCCACAAACTCCTGTTGATTATTATTGA
Protein sequence

>Msa0258250

MDPWLDDLTDDLQSLSFASTTTTTVTTADIKRSTSFSSSSTSAHLSGRSLPFPPPPPTTTKHHAPSSDPRWSAIHRIQSESPSRRILPSDLRFSRRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELVSRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQQNKRFNESAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSSTPAQIIISNQNSPQVAPPKNPHSEHSQFASSSCIIPNCIVPAVSCFQPKRKRKKKQNQFNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLILQLLVKDPARRLGSIMGASAIKHHSFFQGVNWALLRCTTPPYVPPPYTKDKEDVSDDSCPQTPVDYY*