Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0981840 | XP_003593554.1 | 88.636 | 572 | 13 | 7 | 1 | 520 | 1 | 572 | 0.0 | 973 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0981840 | sp|Q13435|SF3B2_HUMAN | 51.301 | 538 | 216 | 14 | 20 | 520 | 367 | 895 | 1.89e-136 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0981840 | G7IPR0 | 88.636 | 572 | 13 | 7 | 1 | 520 | 1 | 572 | 0.0 | 973 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa0981840 | 0.811618 | 6.398360e-51 | -8.615850e-47 |
| Msa0007440 | Msa0981840 | 0.805750 | 1.148048e-49 | -8.615850e-47 |
| Msa0010490 | Msa0981840 | 0.838523 | 2.734614e-57 | -8.615850e-47 |
| Msa0010500 | Msa0981840 | 0.845645 | 3.569198e-59 | -8.615850e-47 |
| Msa0037540 | Msa0981840 | -0.809363 | 1.963172e-50 | -8.615850e-47 |
| Msa0037590 | Msa0981840 | -0.808302 | 3.310419e-50 | -8.615850e-47 |
| Msa0048150 | Msa0981840 | 0.810824 | 9.509914e-51 | -8.615850e-47 |
| Msa0054750 | Msa0981840 | 0.832314 | 1.014610e-55 | -8.615850e-47 |
| Msa0056030 | Msa0981840 | 0.849600 | 2.914180e-60 | -8.615850e-47 |
| Msa0059950 | Msa0981840 | 0.809702 | 1.660564e-50 | -8.615850e-47 |
| Msa0082680 | Msa0981840 | -0.824048 | 9.967291e-54 | -8.615850e-47 |
| Msa0118540 | Msa0981840 | 0.803854 | 2.857736e-49 | -8.615850e-47 |
| Msa0608710 | Msa0981840 | 0.810394 | 1.177961e-50 | -8.615850e-47 |
| Msa0631350 | Msa0981840 | 0.808790 | 2.605395e-50 | -8.615850e-47 |
| Msa0634890 | Msa0981840 | 0.805941 | 1.046477e-49 | -8.615850e-47 |
| Msa0661210 | Msa0981840 | 0.816519 | 5.303685e-52 | -8.615850e-47 |
| Msa0742750 | Msa0981840 | 0.811403 | 7.124058e-51 | -8.615850e-47 |
| Msa0748170 | Msa0981840 | 0.806975 | 6.335810e-50 | -8.615850e-47 |
| Msa0819060 | Msa0981840 | 0.816883 | 4.396139e-52 | -8.615850e-47 |
| Msa0137730 | Msa0981840 | 0.820452 | 6.807283e-53 | -8.615850e-47 |
| Msa0231690 | Msa0981840 | 0.806237 | 9.066571e-50 | -8.615850e-47 |
| Msa0385490 | Msa0981840 | 0.833330 | 5.675221e-56 | -8.615850e-47 |
| Msa0419520 | Msa0981840 | 0.815539 | 8.777398e-52 | -8.615850e-47 |
| Msa0465550 | Msa0981840 | 0.812188 | 4.807812e-51 | -8.615850e-47 |
| Msa0981840 | Msa1081790 | -0.814573 | 1.438097e-51 | -8.615850e-47 |
| Msa0981840 | Msa1089320 | 0.805155 | 1.530146e-49 | -8.615850e-47 |
| Msa0981840 | Msa1133230 | 0.829432 | 5.164107e-55 | -8.615850e-47 |
| Msa0981840 | Msa1133250 | 0.816362 | 5.750126e-52 | -8.615850e-47 |
| Msa0981840 | Msa1135800 | -0.803493 | 3.395494e-49 | -8.615850e-47 |
| Msa0981840 | Msa1166090 | -0.827393 | 1.603619e-54 | -8.615850e-47 |
| Msa0981840 | Msa1176720 | 0.836130 | 1.120911e-56 | -8.615850e-47 |
| Msa0981840 | Msa1231840 | 0.801133 | 1.039657e-48 | -8.615850e-47 |
| Msa0981840 | Msa1359630 | 0.821345 | 4.242872e-53 | -8.615850e-47 |
| Msa0981840 | Msa1364210 | 0.807675 | 4.501453e-50 | -8.615850e-47 |
| Msa0981840 | Msa1371090 | 0.802692 | 4.972511e-49 | -8.615850e-47 |
| Msa0981840 | Msa1386050 | 0.975344 | 8.810518e-140 | -8.615850e-47 |
| Msa0981840 | Msa1388860 | 0.866565 | 2.597358e-65 | -8.615850e-47 |
| Msa0981840 | Msa1396400 | -0.828960 | 6.722923e-55 | -8.615850e-47 |
| Msa0981840 | Msa1421060 | 0.822446 | 2.358126e-53 | -8.615850e-47 |
| Msa0981840 | Msa1436520 | 0.831457 | 1.651518e-55 | -8.615850e-47 |
| Msa0258250 | Msa0981840 | -0.804279 | 2.331371e-49 | -8.615850e-47 |
| Msa0272450 | Msa0981840 | 0.958230 | 3.935771e-116 | -8.615850e-47 |
| Msa0297810 | Msa0981840 | -0.817248 | 3.639505e-52 | -8.615850e-47 |
| Msa0335820 | Msa0981840 | -0.831297 | 1.808168e-55 | -8.615850e-47 |
| Msa0358860 | Msa0981840 | 0.804484 | 2.113322e-49 | -8.615850e-47 |
| Msa0555200 | Msa0981840 | 0.809013 | 2.333425e-50 | -8.615850e-47 |
| Msa0966010 | Msa0981840 | 0.827650 | 1.391329e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0981840 | MtrunA17_Chr2g0282041 | 88.636 | 572 | 13 | 7 | 1 | 520 | 1 | 572 | 0.0 | 973 |
| Msa0981840 | MtrunA17_Chr4g0047751 | 89.087 | 504 | 48 | 5 | 22 | 520 | 78 | 579 | 0.0 | 824 |
| Msa0981840 | MtrunA17_Chr2g0313531 | 53.333 | 165 | 28 | 4 | 1 | 116 | 1 | 165 | 1.07e-36 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0981840 | AT4G21660.1 | 79.283 | 502 | 92 | 7 | 15 | 507 | 74 | 572 | 0.0 | 746 |
| Msa0981840 | AT4G21660.2 | 77.132 | 516 | 92 | 8 | 15 | 507 | 74 | 586 | 0.0 | 736 |
| Msa0981840 | AT4G21660.3 | 81.818 | 363 | 60 | 4 | 148 | 507 | 307 | 666 | 0.0 | 568 |
| Msa0981840 | AT4G21660.3 | 73.239 | 142 | 32 | 3 | 15 | 150 | 74 | 215 | 2.78e-52 | 189 |
| Msa0981840 | AT1G11520.1 | 66.957 | 115 | 34 | 3 | 370 | 483 | 85 | 196 | 3.24e-40 | 144 |
Find 140 sgRNAs with CRISPR-Local
Find 541 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAGGTCGATTTGCTTAA+AGG | 0.211596 | 6_4:-21418074 | Msa0981840:intron |
| AGGATAAATCGGGTGCTAAA+AGG | 0.234213 | 6_4:-21418192 | Msa0981840:CDS |
| CGCCTTCACATCAAGGAAAT+TGG | 0.256686 | 6_4:+21424920 | None:intergenic |
| GACTAAACACTGGGGTGATT+TGG | 0.294704 | 6_4:-21419472 | Msa0981840:CDS |
| TGATTTGGAGGAGGAGGAGG+AGG | 0.308929 | 6_4:-21419457 | Msa0981840:CDS |
| CCTGCGCAACGACTCCGTTT+TGG | 0.320464 | 6_4:+21424779 | None:intergenic |
| CATAGTAGCTATAACTGTTT+CGG | 0.324690 | 6_4:-21417563 | Msa0981840:three_prime_UTR |
| GGGTGATTTGGAGGAGGAGG+AGG | 0.331062 | 6_4:-21419460 | Msa0981840:CDS |
| CACTGGCACCCAGGATAAAT+CGG | 0.339913 | 6_4:-21418203 | Msa0981840:CDS |
| CAGTATGGACGCCCACTATA+TGG | 0.344701 | 6_4:-21420058 | Msa0981840:CDS |
| ATGTCAGCTTTGGCTTTGTT+TGG | 0.352303 | 6_4:+21421426 | None:intergenic |
| CGTATCAAACAAGAAGAAAA+AGG | 0.355646 | 6_4:-21424056 | Msa0981840:intron |
| TCCATGGCTTCCAACTCTTC+CGG | 0.371328 | 6_4:+21418017 | None:intergenic |
| AAAGCTAGCTCCAGCGGGTA+TGG | 0.384929 | 6_4:+21420203 | None:intergenic |
| ATAGTAGCTATAACTGTTTC+GGG | 0.391494 | 6_4:-21417562 | Msa0981840:three_prime_UTR |
| TCCCCAAGGGATGTCAGCTT+TGG | 0.394039 | 6_4:+21421416 | None:intergenic |
| TGCAGCAGATCCTAAGTTGC+TGG | 0.399151 | 6_4:-21423755 | Msa0981840:CDS |
| TTGGTTATCATCCTGGTGGA+TGG | 0.399555 | 6_4:-21420182 | Msa0981840:CDS |
| TTAAAGCAAACCTCATAGTT+AGG | 0.402212 | 6_4:+21420007 | None:intergenic |
| AAAATTTACATACGTGTGTC+CGG | 0.405526 | 6_4:+21418334 | None:intergenic |
| ACGGAAGCAACAGAGAAATA+AGG | 0.414634 | 6_4:-21418522 | Msa0981840:CDS |
| TGGTTATCATCCTGGTGGAT+GGG | 0.416487 | 6_4:-21420181 | Msa0981840:CDS |
| GGAAGAAGAAGAGGAGGAGG+AGG | 0.417125 | 6_4:-21419427 | Msa0981840:CDS |
| ACTTGATAAAGAGGCTTCTC+AGG | 0.422146 | 6_4:+21418497 | None:intergenic |
| AGAGGAAGAAGAAGAGGAGG+AGG | 0.423172 | 6_4:-21419430 | Msa0981840:CDS |
| TTCTCCTCTCTGTAGTTATG+TGG | 0.425409 | 6_4:-21418230 | Msa0981840:intron |
| CCTGATTTCATTGCTGCCAC+TGG | 0.430702 | 6_4:-21422298 | Msa0981840:CDS |
| GGAGGAGGAAGAAGAAGGAA+TGG | 0.431152 | 6_4:-21419412 | Msa0981840:CDS |
| CCTTCAAAGTCTACCTTCTC+TGG | 0.435209 | 6_4:+21424339 | None:intergenic |
| CTGAGGGTGCTCCTCCTCCA+TGG | 0.436159 | 6_4:-21420375 | Msa0981840:CDS |
| GCTAGCTTTGGTTATCATCC+TGG | 0.441107 | 6_4:-21420189 | Msa0981840:CDS |
| CACTTTACTGCCGGAAGAGT+TGG | 0.443843 | 6_4:-21418027 | Msa0981840:CDS |
| GGATAAATCGGGTGCTAAAA+GGG | 0.449282 | 6_4:-21418191 | Msa0981840:intron |
| AAGCCAAAGCTGACATCCCT+TGG | 0.451340 | 6_4:-21421419 | Msa0981840:CDS |
| TGTAGTTATGTGGTTGGCAC+TGG | 0.451870 | 6_4:-21418220 | Msa0981840:intron |
| ATACCCGCTGGAGCTAGCTT+TGG | 0.455254 | 6_4:-21420201 | Msa0981840:CDS |
| TATGCAGGTATGAGGAAGCT+AGG | 0.456420 | 6_4:-21417896 | Msa0981840:intron |
| AGCCAAAGCTGACATCCCTT+GGG | 0.457408 | 6_4:-21421418 | Msa0981840:CDS |
| GGTTATCATCCTGGTGGATG+GGG | 0.459842 | 6_4:-21420180 | Msa0981840:CDS |
| CAGTGTTTAGTCTTATCAAC+TGG | 0.461610 | 6_4:+21419483 | None:intergenic |
| CGAGGGTTTAAGAGAAATTG+AGG | 0.470800 | 6_4:+21424828 | None:intergenic |
| CCAGTGGCAGCAATGAAATC+AGG | 0.472805 | 6_4:+21422298 | None:intergenic |
| TATTTCTCTGTTGCTTCCGT+AGG | 0.476260 | 6_4:+21418525 | None:intergenic |
| TATGAGTTAAACAAGTTCTC+TGG | 0.477229 | 6_4:+21417582 | None:intergenic |
| GAGGAGGAGGAGGAAGAAGA+AGG | 0.483462 | 6_4:-21419417 | Msa0981840:CDS |
| AGAAGAGGAAGAAGAAGAGG+AGG | 0.486639 | 6_4:-21419433 | Msa0981840:CDS |
| CCTCTCTGTAGTTATGTGGT+TGG | 0.487747 | 6_4:-21418226 | Msa0981840:intron |
| GGAAGAAGAGGAAGAAGAAG+AGG | 0.488078 | 6_4:-21419436 | Msa0981840:CDS |
| GGAAGAAGAAGGAATGGAAG+AGG | 0.491838 | 6_4:-21419406 | Msa0981840:CDS |
| ATCTTCAGCTGAGGGTAAGA+TGG | 0.493392 | 6_4:+21420243 | None:intergenic |
| CCAGAGAAGGTAGACTTTGA+AGG | 0.493845 | 6_4:-21424339 | Msa0981840:CDS |
| GTATGGGAGCATTCAGTCCT+GGG | 0.498463 | 6_4:+21420220 | None:intergenic |
| TCCATGGCTTATTAATATGC+AGG | 0.501939 | 6_4:-21420359 | Msa0981840:intron |
| AAAAGAAATTCATACTTGGC+AGG | 0.504336 | 6_4:+21417984 | None:intergenic |
| AAGCTAGCTCCAGCGGGTAT+GGG | 0.504829 | 6_4:+21420204 | None:intergenic |
| ATTCCTACCTCAACAACATC+AGG | 0.507591 | 6_4:+21423882 | None:intergenic |
| ATGAAATCAGGAAGTTGAAA+GGG | 0.508748 | 6_4:+21422310 | None:intergenic |
| TCTGGATTTATGCAGGTATG+AGG | 0.509168 | 6_4:-21417904 | Msa0981840:intron |
| ACAAGATCAGCCTAACTATG+AGG | 0.510458 | 6_4:-21420017 | Msa0981840:intron |
| AGGTCAAAAGTCAGATAAAG+TGG | 0.510633 | 6_4:-21418054 | Msa0981840:CDS |
| GAAGGTAGACTTTGAAGGCA+TGG | 0.512645 | 6_4:-21424334 | Msa0981840:CDS |
| GGTATGGGAGCATTCAGTCC+TGG | 0.514292 | 6_4:+21420219 | None:intergenic |
| AGAAAGTATACTTCGTCGAC+AGG | 0.517760 | 6_4:+21420150 | None:intergenic |
| AAGTCGTGTGATAACATACC+AGG | 0.517875 | 6_4:+21420418 | None:intergenic |
| AGAAGAAGGAATGGAAGAGG+AGG | 0.521562 | 6_4:-21419403 | Msa0981840:CDS |
| CTCCAATTTCCTTGATGTGA+AGG | 0.522310 | 6_4:-21424922 | None:intergenic |
| TAAACCCTCGACGATGGCTG+CGG | 0.522545 | 6_4:-21424815 | Msa0981840:exon |
| TTTAGCACCCGATTTATCCT+GGG | 0.522600 | 6_4:+21418195 | None:intergenic |
| GCCGGAAGAGTTGGAAGCCA+TGG | 0.523168 | 6_4:-21418018 | Msa0981840:CDS |
| TACCCTCAGCTGAAGATCCC+AGG | 0.525500 | 6_4:-21420237 | Msa0981840:CDS |
| TAAACACTGGGGTGATTTGG+AGG | 0.529324 | 6_4:-21419469 | Msa0981840:CDS |
| CATGGAGGAGGAGCACCCTC+AGG | 0.530319 | 6_4:+21420376 | None:intergenic |
| GAAGTTGAAACAAAAGCAAA+GGG | 0.533046 | 6_4:-21421645 | Msa0981840:CDS |
| CTCAAGACCTGATGTTGTTG+AGG | 0.536900 | 6_4:-21423889 | Msa0981840:intron |
| TTCCGTAGGTCAATAACATC+AGG | 0.537897 | 6_4:+21418539 | None:intergenic |
| ATACTAGGACACTGATAAGA+AGG | 0.539496 | 6_4:-21424167 | Msa0981840:intron |
| ACTGGCACCCAGGATAAATC+GGG | 0.540487 | 6_4:-21418202 | Msa0981840:CDS |
| AATGAAATCAGGAAGTTGAA+AGG | 0.540666 | 6_4:+21422309 | None:intergenic |
| GCAGGCTTATATTGAGAAAG+AGG | 0.540854 | 6_4:-21421675 | Msa0981840:intron |
| TTTCCTTGATGTGAAGGCGG+TGG | 0.547457 | 6_4:-21424916 | Msa0981840:five_prime_UTR |
| AGAAGTTGAAACAAAAGCAA+AGG | 0.550383 | 6_4:-21421646 | Msa0981840:CDS |
| CACGACTTGAAAGAAGCTCT+TGG | 0.551012 | 6_4:-21420403 | Msa0981840:CDS |
| TCACGAAGGAAAAGAATTTG+AGG | 0.551560 | 6_4:-21421387 | Msa0981840:intron |
| GAAGAGGAGGAATTTGAAGA+TGG | 0.554526 | 6_4:-21419390 | Msa0981840:CDS |
| AATCCACCGCCTTCACATCA+AGG | 0.556238 | 6_4:+21424913 | None:intergenic |
| TAGCTATAACTGTTTCGGGC+AGG | 0.559786 | 6_4:-21417558 | Msa0981840:three_prime_UTR |
| GGACGGCAAGTCGAAGAAGA+AGG | 0.560843 | 6_4:-21417684 | Msa0981840:CDS |
| CTGAATGCTCCCATACCCGC+TGG | 0.561728 | 6_4:-21420213 | Msa0981840:CDS |
| CTGGGGTGATTTGGAGGAGG+AGG | 0.562341 | 6_4:-21419463 | Msa0981840:CDS |
| GGAGGCTTGCCCCATCCACC+AGG | 0.563012 | 6_4:+21420171 | None:intergenic |
| AGTGGACGTCACTTTACTGC+CGG | 0.566733 | 6_4:-21418036 | Msa0981840:CDS |
| CACCTGATGTTATTGACCTA+CGG | 0.568343 | 6_4:-21418541 | Msa0981840:CDS |
| GTAACACTTCCTTACCAAAA+CGG | 0.572606 | 6_4:-21424793 | Msa0981840:CDS |
| TGGTGTGCAGGTAAAGTTGA+GGG | 0.572723 | 6_4:-21420449 | Msa0981840:intron |
| TGTGACCAATGCCTAGGTAC+AGG | 0.575538 | 6_4:+21423703 | None:intergenic |
| AGCTGAGGGTAAGATGGTGG+AGG | 0.578031 | 6_4:+21420249 | None:intergenic |
| CTTCGTGATACAACTCCCCA+AGG | 0.578300 | 6_4:+21421402 | None:intergenic |
| GCGAGAAGATTTCAGTGACA+TGG | 0.578430 | 6_4:-21417850 | Msa0981840:CDS |
| CAGGTATGAGGAAGCTAGGG+AGG | 0.579280 | 6_4:-21417892 | Msa0981840:CDS |
| AAATTTACATACGTGTGTCC+GGG | 0.587575 | 6_4:+21418335 | None:intergenic |
| TTCTCTTAAACCCTCGACGA+TGG | 0.588795 | 6_4:-21424821 | Msa0981840:exon |
| ACCTGCATATTAATAAGCCA+TGG | 0.590007 | 6_4:+21420358 | None:intergenic |
| AGTCTGTTGATAGTCTATCA+AGG | 0.590579 | 6_4:-21419362 | Msa0981840:intron |
| TGGTATTGAGAAAATCAGAC+AGG | 0.592292 | 6_4:-21422278 | Msa0981840:intron |
| ATTTAGTTTCACTGCTTCAG+AGG | 0.596518 | 6_4:-21424283 | Msa0981840:intron |
| AGCTTTGGTTATCATCCTGG+TGG | 0.598182 | 6_4:-21420186 | Msa0981840:CDS |
| TAACCAAAGCTAGCTCCAGC+GGG | 0.600182 | 6_4:+21420198 | None:intergenic |
| ATGCAGGTATGAGGAAGCTA+GGG | 0.600493 | 6_4:-21417895 | Msa0981840:intron |
| CACTGATAAGAAGGATGAGG+CGG | 0.600748 | 6_4:-21424158 | Msa0981840:CDS |
| GTCCTGGGATCTTCAGCTGA+GGG | 0.601211 | 6_4:+21420235 | None:intergenic |
| GTTACCGCAGCCATCGTCGA+GGG | 0.603962 | 6_4:+21424811 | None:intergenic |
| GCAGGATCTTTACTTGTACC+CGG | 0.604637 | 6_4:-21418353 | Msa0981840:CDS |
| GCTCAGCACTCCTACTGGAG+TGG | 0.606638 | 6_4:-21418567 | Msa0981840:intron |
| TTTCAGTGACATGGTTGCAG+AGG | 0.609120 | 6_4:-21417841 | Msa0981840:intron |
| AAGTTGAGGGAGATGAAACC+TGG | 0.609533 | 6_4:-21420436 | Msa0981840:CDS |
| AGTTGATAAGACTAAACACT+GGG | 0.609767 | 6_4:-21419481 | Msa0981840:CDS |
| AATTGAGTATGTACCAGAGA+AGG | 0.613096 | 6_4:-21424352 | Msa0981840:CDS |
| ATATTAATAAGCCATGGAGG+AGG | 0.613756 | 6_4:+21420364 | None:intergenic |
| CTGTACCTGTACCTAGGCAT+TGG | 0.613828 | 6_4:-21423708 | Msa0981840:CDS |
| AGAAAGATGCAAGAAAAGGA+CGG | 0.618296 | 6_4:-21417701 | Msa0981840:CDS |
| TTCAGCTGAGGGTAAGATGG+TGG | 0.618413 | 6_4:+21420246 | None:intergenic |
| TGTGGTTGGCACTGGCACCC+AGG | 0.621505 | 6_4:-21418212 | Msa0981840:CDS |
| TCAGGTGTCTCCACTCCAGT+AGG | 0.629943 | 6_4:+21418557 | None:intergenic |
| GAAGCTCTTGGTATGCCTGA+GGG | 0.630070 | 6_4:-21420391 | Msa0981840:CDS |
| CAATTTCCTTGATGTGAAGG+CGG | 0.630272 | 6_4:-21424919 | Msa0981840:five_prime_UTR |
| GGACACTGATAAGAAGGATG+AGG | 0.631112 | 6_4:-21424161 | Msa0981840:CDS |
| ATAACCAAAGCTAGCTCCAG+CGG | 0.635047 | 6_4:+21420197 | None:intergenic |
| ACACTGGGGTGATTTGGAGG+AGG | 0.642355 | 6_4:-21419466 | Msa0981840:CDS |
| AGTCCTGGGATCTTCAGCTG+AGG | 0.642746 | 6_4:+21420234 | None:intergenic |
| CAGTTGATAAGACTAAACAC+TGG | 0.643279 | 6_4:-21419482 | Msa0981840:CDS |
| AAGTATACTTCGTCGACAGG+AGG | 0.657544 | 6_4:+21420153 | None:intergenic |
| GGAACACTGTACCTGTACCT+AGG | 0.658691 | 6_4:-21423714 | Msa0981840:CDS |
| AGAAGCTCTTGGTATGCCTG+AGG | 0.662536 | 6_4:-21420392 | Msa0981840:CDS |
| TTCGTGATACAACTCCCCAA+GGG | 0.663464 | 6_4:+21421403 | None:intergenic |
| TTGGTGTGCAGGTAAAGTTG+AGG | 0.667122 | 6_4:-21420450 | Msa0981840:intron |
| GCCAAAGCTGACATCCCTTG+GGG | 0.669292 | 6_4:-21421417 | Msa0981840:CDS |
| TGTTACCGCAGCCATCGTCG+AGG | 0.690229 | 6_4:+21424810 | None:intergenic |
| CTTGGGGAGTTGTATCACGA+AGG | 0.695093 | 6_4:-21421401 | Msa0981840:CDS |
| TGCATATTAATAAGCCATGG+AGG | 0.699081 | 6_4:+21420361 | None:intergenic |
| GTTGATAAGACTAAACACTG+GGG | 0.838951 | 6_4:-21419480 | Msa0981840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr6_4:21424822-21424841 | Msa0981840:exon | 0.0% |
| !! | ATTTAAAAAAAAAAACAATG+TGG | - | chr6_4:21423510-21423529 | Msa0981840:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGGT+TGG | - | chr6_4:21424829-21424848 | Msa0981840:five_prime_UTR | 10.0% |
| !!! | TTGATTTGAATTAAATTGAT+AGG | - | chr6_4:21417791-21417810 | Msa0981840:intron | 15.0% |
| !!! | TTGTTTTGAATTTTGATTAA+AGG | - | chr6_4:21418267-21418286 | Msa0981840:intron | 15.0% |
| !!! | TATTTCATAATTTCATTTTC+AGG | - | chr6_4:21418678-21418697 | Msa0981840:intron | 15.0% |
| !! | CATTATAACAAAGATAATAA+AGG | + | chr6_4:21419032-21419051 | None:intergenic | 15.0% |
| !!! | ATTATCTTTGTTATAATGAT+TGG | - | chr6_4:21419034-21419053 | Msa0981840:intron | 15.0% |
| !!! | TTATCTTTGTTATAATGATT+GGG | - | chr6_4:21419035-21419054 | Msa0981840:intron | 15.0% |
| !! | TAATATATTACAGTTCAATA+CGG | + | chr6_4:21419171-21419190 | None:intergenic | 15.0% |
| !! | TATAAATTTCAGTTTCATTT+AGG | - | chr6_4:21419367-21419386 | Msa0981840:CDS | 15.0% |
| !! | ATAAATTTCAGTTTCATTTA+GGG | - | chr6_4:21419368-21419387 | Msa0981840:CDS | 15.0% |
| !!! | TTGTTTTCAAGATTATAAAT+TGG | + | chr6_4:21419452-21419471 | None:intergenic | 15.0% |
| !! | ATAAATAATTGAAGATAAAG+AGG | + | chr6_4:21420023-21420042 | None:intergenic | 15.0% |
| !! | AATCTCAAGATTATTTAAAT+AGG | - | chr6_4:21420442-21420461 | Msa0981840:CDS | 15.0% |
| !!! | TAAAGAATTTATGTAGATTT+TGG | - | chr6_4:21420486-21420505 | Msa0981840:intron | 15.0% |
| !!! | AAAGAATTTATGTAGATTTT+GGG | - | chr6_4:21420487-21420506 | Msa0981840:intron | 15.0% |
| !! | TAAATGAACTTTATATGAAA+TGG | - | chr6_4:21420676-21420695 | Msa0981840:intron | 15.0% |
| !! | AATAAAATTGTAAAACACAA+AGG | + | chr6_4:21420912-21420931 | None:intergenic | 15.0% |
| !! | TAAAATAGTTATAGAACATA+TGG | + | chr6_4:21420959-21420978 | None:intergenic | 15.0% |
| !! | AAATATAACTATTAGAAAGT+AGG | + | chr6_4:21420985-21421004 | None:intergenic | 15.0% |
| !! | TTTCTAATAGTTATATTTCT+TGG | - | chr6_4:21420987-21421006 | Msa0981840:intron | 15.0% |
| !!! | TCGTTTTCTTTTAATTATTT+AGG | - | chr6_4:21421313-21421332 | Msa0981840:intron | 15.0% |
| !! | TATACTACTGAAATTATTAT+TGG | - | chr6_4:21421431-21421450 | Msa0981840:CDS | 15.0% |
| !! | ATACTACTGAAATTATTATT+GGG | - | chr6_4:21421432-21421451 | Msa0981840:CDS | 15.0% |
| !! | AATATTTCATACATTTACAT+TGG | + | chr6_4:21421620-21421639 | None:intergenic | 15.0% |
| !! | TTACTTATATATTATTGGAA+CGG | - | chr6_4:21421972-21421991 | Msa0981840:intron | 15.0% |
| !!! | ATAAATTCACTGTTTATTTT+TGG | - | chr6_4:21422344-21422363 | Msa0981840:intron | 15.0% |
| !!! | ATAATTGATTTTCTTTATGT+TGG | + | chr6_4:21423299-21423318 | None:intergenic | 15.0% |
| !!! | TTTTCAATGATATTTGTTTT+AGG | - | chr6_4:21424336-21424355 | Msa0981840:CDS | 15.0% |
| !!! | TTTCATGTTTTTTTCTTTTT+TGG | - | chr6_4:21424369-21424388 | Msa0981840:CDS | 15.0% |
| !! | TTGAGGAAAAAATTGAAATA+TGG | + | chr6_4:21417627-21417646 | None:intergenic | 20.0% |
| !! | ATCAATATTGTAGTGAAATT+AGG | - | chr6_4:21417859-21417878 | Msa0981840:CDS | 20.0% |
| !! | TCAATATTGTAGTGAAATTA+GGG | - | chr6_4:21417860-21417879 | Msa0981840:CDS | 20.0% |
| !! | TTGTATATCTAAGTAGATAA+TGG | - | chr6_4:21418010-21418029 | Msa0981840:CDS | 20.0% |
| !!! | TAGATAATGGTTTTCATAAT+TGG | - | chr6_4:21418023-21418042 | Msa0981840:CDS | 20.0% |
| !!! | AAGCATACTTGTTAATATTT+AGG | - | chr6_4:21418078-21418097 | Msa0981840:intron | 20.0% |
| !!! | AAGATTAAACTTTTTCAGAA+TGG | + | chr6_4:21418511-21418530 | None:intergenic | 20.0% |
| !! | ATGAAATATCATTTGCATAA+TGG | + | chr6_4:21418666-21418685 | None:intergenic | 20.0% |
| !!! | ATAATTTCATTTTCAGGTTT+GGG | - | chr6_4:21418684-21418703 | Msa0981840:intron | 20.0% |
| !! | ATCTTATATATGTATGTATG+TGG | - | chr6_4:21418926-21418945 | Msa0981840:intron | 20.0% |
| !!! | ACTTGTATTGTTTTATATGA+TGG | - | chr6_4:21419072-21419091 | Msa0981840:intron | 20.0% |
| !!! | CTTGTATTGTTTTATATGAT+GGG | - | chr6_4:21419073-21419092 | Msa0981840:intron | 20.0% |
| !!! | TTGTATTGTTTTATATGATG+GGG | - | chr6_4:21419074-21419093 | Msa0981840:intron | 20.0% |
| !! | TTTATAATCTTGAAAACAAG+TGG | - | chr6_4:21419453-21419472 | Msa0981840:CDS | 20.0% |
| !! | CAAAAAAGCCATATAATTAT+AGG | + | chr6_4:21419901-21419920 | None:intergenic | 20.0% |
| !!! | CTTTTTTGCATGATATTAAT+GGG | - | chr6_4:21419913-21419932 | Msa0981840:intron | 20.0% |
| !! | TCAGCATCAATTATATAATT+GGG | + | chr6_4:21420062-21420081 | None:intergenic | 20.0% |
| !! | TTAAATAATCTTGAGATTCT+TGG | + | chr6_4:21420440-21420459 | None:intergenic | 20.0% |
| !! | AAAAATGGATATAGATTATC+AGG | - | chr6_4:21420869-21420888 | Msa0981840:intron | 20.0% |
| !! | TGTTAAATAAAATCAACAAG+TGG | - | chr6_4:21421406-21421425 | Msa0981840:CDS | 20.0% |
| !!! | TTTCCAGTATTTTGTTTATT+AGG | - | chr6_4:21421540-21421559 | Msa0981840:intron | 20.0% |
| !!! | ACAAGTTTTCACTTTTAATT+TGG | - | chr6_4:21421939-21421958 | Msa0981840:intron | 20.0% |
| !! | GTTATACTATTTAATTAGAG+TGG | - | chr6_4:21422491-21422510 | Msa0981840:intron | 20.0% |
| !! | CAAAAAGAAAACTACATATA+TGG | + | chr6_4:21422637-21422656 | None:intergenic | 20.0% |
| !!! | AGGAATATATTTTGAAGTTT+TGG | + | chr6_4:21422742-21422761 | None:intergenic | 20.0% |
| !!! | TTTTTCATTCAACCAATAAA+AGG | + | chr6_4:21422842-21422861 | None:intergenic | 20.0% |
| !!! | TTTTAAAGTTGACATTGTAT+GGG | + | chr6_4:21422901-21422920 | None:intergenic | 20.0% |
| !!! | ATTTTAAAGTTGACATTGTA+TGG | + | chr6_4:21422902-21422921 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTCATAATTTGC+TGG | - | chr6_4:21422941-21422960 | Msa0981840:intron | 20.0% |
| !! | ATGTTAACAAGATAATGAAA+TGG | + | chr6_4:21423146-21423165 | None:intergenic | 20.0% |
| !!! | CTAGTTTTTTTCTTTTGAAA+GGG | - | chr6_4:21423245-21423264 | Msa0981840:intron | 20.0% |
| !! | ATGTTGAGTTATTTATTAGT+AGG | - | chr6_4:21423413-21423432 | Msa0981840:intron | 20.0% |
| !! | TGTTGAGTTATTTATTAGTA+GGG | - | chr6_4:21423414-21423433 | Msa0981840:intron | 20.0% |
| !! | TCATTTAGTAAATTTATCAG+AGG | - | chr6_4:21423437-21423456 | Msa0981840:intron | 20.0% |
| !!! | TTTGGTTCATTTTTTTTAGA+GGG | + | chr6_4:21423795-21423814 | None:intergenic | 20.0% |
| !!! | TAGATAACGGAAAAATAAAA+AGG | + | chr6_4:21424061-21424080 | None:intergenic | 20.0% |
| !! | TATCAAGAAACAAACAATTA+TGG | + | chr6_4:21424202-21424221 | None:intergenic | 20.0% |
| !!! | AAGATGTTTTCTCTTTTAAT+AGG | - | chr6_4:21424302-21424321 | Msa0981840:CDS | 20.0% |
| !!! | AGATGTTTTCTCTTTTAATA+GGG | - | chr6_4:21424303-21424322 | Msa0981840:CDS | 20.0% |
| ! | ACGAAAATCAAATGAATCAA+AGG | + | chr6_4:21417751-21417770 | None:intergenic | 25.0% |
| !! | GATTTTCGTTGTTTATAGAT+TGG | - | chr6_4:21417762-21417781 | Msa0981840:intron | 25.0% |
| !!! | TGATTGATTATAGAGTGTTT+TGG | - | chr6_4:21417984-21418003 | Msa0981840:intron | 25.0% |
| !! | ATTGCACAATTAGTTTGAAA+TGG | - | chr6_4:21418617-21418636 | Msa0981840:intron | 25.0% |
| !! | ACAATTAGTTTGAAATGGTT+GGG | - | chr6_4:21418622-21418641 | Msa0981840:intron | 25.0% |
| !!! | CATAATTTCATTTTCAGGTT+TGG | - | chr6_4:21418683-21418702 | Msa0981840:intron | 25.0% |
| !!! | TGGTGTTTTTGAAATCTTAT+CGG | - | chr6_4:21418734-21418753 | Msa0981840:intron | 25.0% |
| !! | ACAGAAAAGAAAATTTTTGC+AGG | - | chr6_4:21418786-21418805 | Msa0981840:intron | 25.0% |
| ! | CCTATAATAACTATCAAGTT+AGG | + | chr6_4:21418823-21418842 | None:intergenic | 25.0% |
| !! | CCTAACTTGATAGTTATTAT+AGG | - | chr6_4:21418820-21418839 | Msa0981840:intron | 25.0% |
| ! | TGTTATAATGATTGGGAATA+TGG | - | chr6_4:21419042-21419061 | Msa0981840:intron | 25.0% |
| !!! | AAATATCCTCGTTTATTTTC+AGG | + | chr6_4:21419729-21419748 | None:intergenic | 25.0% |
| !!! | GCTTTTTTGCATGATATTAA+TGG | - | chr6_4:21419912-21419931 | Msa0981840:intron | 25.0% |
| ! | GTCAGCATCAATTATATAAT+TGG | + | chr6_4:21420063-21420082 | None:intergenic | 25.0% |
| !!! | GAATGTTCACTTATTTTGAT+GGG | + | chr6_4:21420287-21420306 | None:intergenic | 25.0% |
| !!! | AGAATGTTCACTTATTTTGA+TGG | + | chr6_4:21420288-21420307 | None:intergenic | 25.0% |
| ! | TACAGAAAAAATGCAATTTC+AGG | + | chr6_4:21420347-21420366 | None:intergenic | 25.0% |
| ! | AGATTATTTAAATAGGTAGC+TGG | - | chr6_4:21420449-21420468 | Msa0981840:intron | 25.0% |
| ! | GATTATTTAAATAGGTAGCT+GGG | - | chr6_4:21420450-21420469 | Msa0981840:intron | 25.0% |
| !!! | AATTTATGTAGATTTTGGGA+TGG | - | chr6_4:21420491-21420510 | Msa0981840:intron | 25.0% |
| ! | CAGTAGAGATATGTTATATT+GGG | - | chr6_4:21420606-21420625 | Msa0981840:intron | 25.0% |
| ! | AGTAGAGATATGTTATATTG+GGG | - | chr6_4:21420607-21420626 | Msa0981840:intron | 25.0% |
| !!! | ATATCCATTTTTCCCATTTT+TGG | + | chr6_4:21420861-21420880 | None:intergenic | 25.0% |
| ! | ACTTAAAAAATGCATCATGA+AGG | + | chr6_4:21421022-21421041 | None:intergenic | 25.0% |
| !!! | TCTTCAATACTTTTTAGCAA+GGG | + | chr6_4:21421113-21421132 | None:intergenic | 25.0% |
| !!! | TTCTTCAATACTTTTTAGCA+AGG | + | chr6_4:21421114-21421133 | None:intergenic | 25.0% |
| ! | ATATAGTGTAACTTATGCTT+TGG | - | chr6_4:21421141-21421160 | Msa0981840:intron | 25.0% |
| !!! | ATTTATTTCTTGCGACATTT+TGG | - | chr6_4:21421172-21421191 | Msa0981840:intron | 25.0% |
| ! | TGACCTAATAAACAAAATAC+TGG | + | chr6_4:21421546-21421565 | None:intergenic | 25.0% |
| !! | TGAAATATTTCTCTTTTGAG+AGG | - | chr6_4:21421631-21421650 | Msa0981840:CDS | 25.0% |
| !!! | ATTAGTTTGTATGATGACAT+TGG | - | chr6_4:21421996-21422015 | Msa0981840:intron | 25.0% |
| ! | AAGCTGGTTAATAAGATAAA+GGG | + | chr6_4:21422374-21422393 | None:intergenic | 25.0% |
| ! | TAAGCTGGTTAATAAGATAA+AGG | + | chr6_4:21422375-21422394 | None:intergenic | 25.0% |
| ! | ACAATGTTTACATTAAACAC+AGG | + | chr6_4:21422668-21422687 | None:intergenic | 25.0% |
| !!! | CTATTTCTTGATTACTCTTT+TGG | - | chr6_4:21422767-21422786 | Msa0981840:intron | 25.0% |
| !! | TTTAAAGTTGACATTGTATG+GGG | + | chr6_4:21422900-21422919 | None:intergenic | 25.0% |
| ! | ATCTTGTTAACATGTAATGT+AGG | - | chr6_4:21423153-21423172 | Msa0981840:intron | 25.0% |
| !!! | ATTTTACCAAAAGAAAGTGT+GGG | - | chr6_4:21423194-21423213 | Msa0981840:intron | 25.0% |
| ! | GAAAAAAACTAGCAAAATCA+AGG | + | chr6_4:21423237-21423256 | None:intergenic | 25.0% |
| !!! | GCTAGTTTTTTTCTTTTGAA+AGG | - | chr6_4:21423244-21423263 | Msa0981840:intron | 25.0% |
| ! | AAAGGGATTACTATTCTTAA+TGG | - | chr6_4:21423262-21423281 | Msa0981840:intron | 25.0% |
| !! | TTGATTTTCTTTATGTTGGT+GGG | + | chr6_4:21423295-21423314 | None:intergenic | 25.0% |
| !!! | ATTGATTTTCTTTATGTTGG+TGG | + | chr6_4:21423296-21423315 | None:intergenic | 25.0% |
| ! | GTCTTTCAATTAAGCTTATT+TGG | - | chr6_4:21423328-21423347 | Msa0981840:intron | 25.0% |
| !!! | AGATTTTAAAATACCGTGTT+TGG | - | chr6_4:21423608-21423627 | Msa0981840:intron | 25.0% |
| !! | TTTTACCCTTGTAATATTTG+AGG | - | chr6_4:21423676-21423695 | Msa0981840:intron | 25.0% |
| ! | TATGACCTCAAATATTACAA+GGG | + | chr6_4:21423684-21423703 | None:intergenic | 25.0% |
| ! | ATATGACCTCAAATATTACA+AGG | + | chr6_4:21423685-21423704 | None:intergenic | 25.0% |
| ! | TGAGGTCATATTAATTATAC+AGG | - | chr6_4:21423694-21423713 | Msa0981840:CDS | 25.0% |
| !!! | TTCATTTTTTTTAGAGGGAA+GGG | + | chr6_4:21423790-21423809 | None:intergenic | 25.0% |
| !!! | GTTTGGTTCATTTTTTTTAG+AGG | + | chr6_4:21423796-21423815 | None:intergenic | 25.0% |
| ! | ATTGACAGTAAATAACTGTA+CGG | + | chr6_4:21423844-21423863 | None:intergenic | 25.0% |
| !! | TATTTTTCCGTTATCTATGA+AGG | - | chr6_4:21424064-21424083 | Msa0981840:CDS | 25.0% |
| ! | GAAGAGAAAGAAGAAAAAAT+TGG | - | chr6_4:21424092-21424111 | Msa0981840:CDS | 25.0% |
| !!! | TCAATGATATTTGTTTTAGG+AGG | - | chr6_4:21424339-21424358 | Msa0981840:CDS | 25.0% |
| ! | GATGAAAAGAAATTCATACT+TGG | + | chr6_4:21424492-21424511 | None:intergenic | 25.0% |
| ! | GTTTCTATTTCAGATTTAGT+GGG | - | chr6_4:21424512-21424531 | Msa0981840:intron | 25.0% |
| ! | AAGTTAGATACAGATCATAA+TGG | + | chr6_4:21424711-21424730 | None:intergenic | 25.0% |
| ! | TTATGATCTGTATCTAACTT+TGG | - | chr6_4:21424711-21424730 | Msa0981840:intron | 25.0% |
| !! | TTTTTCTTTTCTTCTCATTC+TGG | + | chr6_4:21424749-21424768 | None:intergenic | 25.0% |
| ! | AAAAAGAAAGATGCAAGAAA+AGG | - | chr6_4:21424764-21424783 | Msa0981840:intron | 25.0% |
| TTTCGTTGTTTATAGATTGG+AGG | - | chr6_4:21417765-21417784 | Msa0981840:intron | 30.0% | |
| !! | AGGTTTGCTATTGTAATACT+AGG | - | chr6_4:21418287-21418306 | Msa0981840:intron | 30.0% |
| GATAACGAGCAAAAAGAAAA+AGG | - | chr6_4:21418390-21418409 | Msa0981840:intron | 30.0% | |
| CGTATCAAACAAGAAGAAAA+AGG | - | chr6_4:21418413-21418432 | Msa0981840:intron | 30.0% | |
| !! | AATTTGTTGTTGTATTCCTG+TGG | - | chr6_4:21418481-21418500 | Msa0981840:intron | 30.0% |
| ! | CACAATTAGTTTGAAATGGT+TGG | - | chr6_4:21418621-21418640 | Msa0981840:intron | 30.0% |
| TGAAAACGATGAAGTCAATA+AGG | - | chr6_4:21418900-21418919 | Msa0981840:intron | 30.0% | |
| AATAAAGGAGAAACAACTCA+AGG | + | chr6_4:21419017-21419036 | None:intergenic | 30.0% | |
| !! | TGTTTTATATGATGGGGAAT+AGG | - | chr6_4:21419080-21419099 | Msa0981840:intron | 30.0% |
| !! | TATGAATTGGTGTTATGGTT+TGG | + | chr6_4:21419144-21419163 | None:intergenic | 30.0% |
| !! | GATCTTATGAATTGGTGTTA+TGG | + | chr6_4:21419149-21419168 | None:intergenic | 30.0% |
| TCAATACGGATCTTATGAAT+TGG | + | chr6_4:21419157-21419176 | None:intergenic | 30.0% | |
| TTACAAACGAACTAGACTAA+TGG | - | chr6_4:21419192-21419211 | Msa0981840:intron | 30.0% | |
| AAAATTGTATAGCAACGGTT+CGG | + | chr6_4:21419232-21419251 | None:intergenic | 30.0% | |
| CAAAAAAACAGTTCAACTTG+GGG | + | chr6_4:21419255-21419274 | None:intergenic | 30.0% | |
| GCAAAAAAACAGTTCAACTT+GGG | + | chr6_4:21419256-21419275 | None:intergenic | 30.0% | |
| ! | TGTGCATATACAAAAGCTTT+TGG | - | chr6_4:21419317-21419336 | Msa0981840:intron | 30.0% |
| ! | GAATCCTAAATCCATTTTCA+CGG | + | chr6_4:21419633-21419652 | None:intergenic | 30.0% |
| AAACGAGGATATTTGTAGTT+CGG | - | chr6_4:21419735-21419754 | Msa0981840:intron | 30.0% | |
| GTAAATTGTGTGTGAAATAG+TGG | - | chr6_4:21419788-21419807 | Msa0981840:intron | 30.0% | |
| ! | GTAAACTACCAGAATTTGTT+CGG | - | chr6_4:21419819-21419838 | Msa0981840:intron | 30.0% |
| GAAATTAACCGAACAAATTC+TGG | + | chr6_4:21419830-21419849 | None:intergenic | 30.0% | |
| CGGTTAATTTCAGTATAGTT+CGG | - | chr6_4:21419839-21419858 | Msa0981840:intron | 30.0% | |
| ATAATTATAGGTCCCCAATT+AGG | + | chr6_4:21419889-21419908 | None:intergenic | 30.0% | |
| ATTGGGGACCTATAATTATA+TGG | - | chr6_4:21419890-21419909 | Msa0981840:intron | 30.0% | |
| ATGAAATCAGGAAGTTGAAA+GGG | + | chr6_4:21420162-21420181 | None:intergenic | 30.0% | |
| AATGAAATCAGGAAGTTGAA+AGG | + | chr6_4:21420163-21420182 | None:intergenic | 30.0% | |
| ACACACATATATATGCAAAC+AGG | + | chr6_4:21420225-21420244 | None:intergenic | 30.0% | |
| GCAGTAGAGATATGTTATAT+TGG | - | chr6_4:21420605-21420624 | Msa0981840:intron | 30.0% | |
| TGAAACAGAAATTCAACAGA+GGG | + | chr6_4:21420656-21420675 | None:intergenic | 30.0% | |
| ATGAAACAGAAATTCAACAG+AGG | + | chr6_4:21420657-21420676 | None:intergenic | 30.0% | |
| TAGATGAATGTATGTAGCAT+AGG | + | chr6_4:21420709-21420728 | None:intergenic | 30.0% | |
| AGAAGTTGAAACAAAAGCAA+AGG | - | chr6_4:21420823-21420842 | Msa0981840:intron | 30.0% | |
| GAAGTTGAAACAAAAGCAAA+GGG | - | chr6_4:21420824-21420843 | Msa0981840:intron | 30.0% | |
| AGTTATATTTCTTGGTTGCT+AGG | - | chr6_4:21420995-21421014 | Msa0981840:intron | 30.0% | |
| !!! | TTTGGTTTTGTTGTAGTGTT+AGG | - | chr6_4:21421190-21421209 | Msa0981840:intron | 30.0% |
| CTGTGAAGTAAAAGTTACTA+TGG | + | chr6_4:21421231-21421250 | None:intergenic | 30.0% | |
| ! | CATAGTAACTTTTACTTCAC+AGG | - | chr6_4:21421229-21421248 | Msa0981840:intron | 30.0% |
| GAAACAAACTAATGCAAAAG+AGG | + | chr6_4:21421480-21421499 | None:intergenic | 30.0% | |
| !! | ATATTTCTCTTTTGAGAGGT+TGG | - | chr6_4:21421635-21421654 | Msa0981840:CDS | 30.0% |
| TTAGATCTTTCGTCAAAAGA+GGG | + | chr6_4:21421843-21421862 | None:intergenic | 30.0% | |
| !! | CTTATTCTAGCTTTAAGTAG+AGG | - | chr6_4:21421874-21421893 | Msa0981840:intron | 30.0% |
| ! | ATTTTTCGTTGATCCTGTAT+TGG | - | chr6_4:21422152-21422171 | Msa0981840:intron | 30.0% |
| TAGAACACGTTTAATGTACA+AGG | + | chr6_4:21422178-21422197 | None:intergenic | 30.0% | |
| !!! | TATTTTTTTCCCCAGAGATA+TGG | - | chr6_4:21422196-21422215 | Msa0981840:intron | 30.0% |
| AGCTGGTTAATAAGATAAAG+GGG | + | chr6_4:21422373-21422392 | None:intergenic | 30.0% | |
| GTATCTTCATCTAAACAGTA+TGG | - | chr6_4:21422396-21422415 | Msa0981840:intron | 30.0% | |
| CAAAAACATCTCCATATAGT+GGG | + | chr6_4:21422425-21422444 | None:intergenic | 30.0% | |
| TTAAAGCAAACCTCATAGTT+AGG | + | chr6_4:21422465-21422484 | None:intergenic | 30.0% | |
| !!! | TTTGAAGTTTTGGATAAGCA+AGG | + | chr6_4:21422732-21422751 | None:intergenic | 30.0% |
| !! | AGTTGATAAGACTAAACACT+GGG | - | chr6_4:21422988-21423007 | Msa0981840:intron | 30.0% |
| ! | CATTTTACCAAAAGAAAGTG+TGG | - | chr6_4:21423193-21423212 | Msa0981840:intron | 30.0% |
| ! | AGTAAATTTATCAGAGGTAC+TGG | - | chr6_4:21423443-21423462 | Msa0981840:intron | 30.0% |
| !! | GTAAATTTATCAGAGGTACT+GGG | - | chr6_4:21423444-21423463 | Msa0981840:intron | 30.0% |
| AAAAAACAATGTGGATATGC+AGG | - | chr6_4:21423519-21423538 | Msa0981840:intron | 30.0% | |
| !!! | TCATTTTTTTTAGAGGGAAG+GGG | + | chr6_4:21423789-21423808 | None:intergenic | 30.0% |
| !!! | GTTCATTTTTTTTAGAGGGA+AGG | + | chr6_4:21423791-21423810 | None:intergenic | 30.0% |
| TACTCTAAATCTTAGTGGTT+TGG | + | chr6_4:21423813-21423832 | None:intergenic | 30.0% | |
| TGGATTACTCTAAATCTTAG+TGG | + | chr6_4:21423818-21423837 | None:intergenic | 30.0% | |
| TTGACAGTAAATAACTGTAC+GGG | + | chr6_4:21423843-21423862 | None:intergenic | 30.0% | |
| GAAAAACTCACTTGATAAAG+AGG | + | chr6_4:21423984-21424003 | None:intergenic | 30.0% | |
| GCTGTTAAAAAATGTTCAGT+AGG | + | chr6_4:21424006-21424025 | None:intergenic | 30.0% | |
| AAAGAAGAAAAAATTGGTGC+AGG | - | chr6_4:21424098-21424117 | Msa0981840:CDS | 30.0% | |
| AAAATTTACATACGTGTGTC+CGG | + | chr6_4:21424138-21424157 | None:intergenic | 30.0% | |
| ! | TTTCTCTTTTAATAGGGTAG+AGG | - | chr6_4:21424309-21424328 | Msa0981840:CDS | 30.0% |
| ! | TTCTCTTTTAATAGGGTAGA+GGG | - | chr6_4:21424310-21424329 | Msa0981840:CDS | 30.0% |
| !!! | TTTTCTTTTTTGGAACTTCC+AGG | - | chr6_4:21424379-21424398 | Msa0981840:intron | 30.0% |
| AAAAGAAATTCATACTTGGC+AGG | + | chr6_4:21424488-21424507 | None:intergenic | 30.0% | |
| CGTTTCTATTTCAGATTTAG+TGG | - | chr6_4:21424511-21424530 | Msa0981840:intron | 30.0% | |
| AAGAAATGATTTCTTACCTC+TGG | - | chr6_4:21424547-21424566 | Msa0981840:intron | 30.0% | |
| AACTAACCCTACTAATCATA+TGG | - | chr6_4:21424657-21424676 | Msa0981840:intron | 30.0% | |
| ACTAACCCTACTAATCATAT+GGG | - | chr6_4:21424658-21424677 | Msa0981840:intron | 30.0% | |
| ! | ATCTAACTTTGGTCTTTATC+TGG | - | chr6_4:21424722-21424741 | Msa0981840:intron | 30.0% |
| TATGAGTTAAACAAGTTCTC+TGG | + | chr6_4:21424890-21424909 | None:intergenic | 30.0% | |
| CATAGTAGCTATAACTGTTT+CGG | - | chr6_4:21424906-21424925 | Msa0981840:five_prime_UTR | 30.0% | |
| ATAGTAGCTATAACTGTTTC+GGG | - | chr6_4:21424907-21424926 | Msa0981840:five_prime_UTR | 30.0% | |
| GTAACACTTCCTTACCAAAA+CGG | - | chr6_4:21417676-21417695 | Msa0981840:CDS | 35.0% | |
| AATTGAGTATGTACCAGAGA+AGG | - | chr6_4:21418117-21418136 | Msa0981840:intron | 35.0% | |
| ! | ATTTAGTTTCACTGCTTCAG+AGG | - | chr6_4:21418186-21418205 | Msa0981840:intron | 35.0% |
| ! | TTTTGTCGTTGCAACTTCTT+TGG | - | chr6_4:21418240-21418259 | Msa0981840:intron | 35.0% |
| ATACTAGGACACTGATAAGA+AGG | - | chr6_4:21418302-21418321 | Msa0981840:intron | 35.0% | |
| TTCAAAAACACCAGCAACTT+AGG | + | chr6_4:21418727-21418746 | None:intergenic | 35.0% | |
| AATGATGTAAGCATGTCTGA+TGG | - | chr6_4:21418845-21418864 | Msa0981840:intron | 35.0% | |
| ATTACTACATCACTCATGCA+GGG | + | chr6_4:21418876-21418895 | None:intergenic | 35.0% | |
| TATTACTACATCACTCATGC+AGG | + | chr6_4:21418877-21418896 | None:intergenic | 35.0% | |
| TGCATGAGTGATGTAGTAAT+AGG | - | chr6_4:21418876-21418895 | Msa0981840:intron | 35.0% | |
| GCATGAGTGATGTAGTAATA+GGG | - | chr6_4:21418877-21418896 | Msa0981840:intron | 35.0% | |
| TGGGGAAAATTGTATAGCAA+CGG | + | chr6_4:21419237-21419256 | None:intergenic | 35.0% | |
| CGCAAAAAAACAGTTCAACT+TGG | + | chr6_4:21419257-21419276 | None:intergenic | 35.0% | |
| ! | TATACAAAAGCTTTTGGCGA+TGG | - | chr6_4:21419323-21419342 | Msa0981840:intron | 35.0% |
| ATGGATGAAACAGTGGTTAT+GGG | - | chr6_4:21419342-21419361 | Msa0981840:intron | 35.0% | |
| AGGGATTAATTCCCAAATTG+TGG | - | chr6_4:21419387-21419406 | Msa0981840:CDS | 35.0% | |
| GGGATTAATTCCCAAATTGT+GGG | - | chr6_4:21419388-21419407 | Msa0981840:CDS | 35.0% | |
| AATTCCCAAATTGTGGGAAA+AGG | - | chr6_4:21419394-21419413 | Msa0981840:CDS | 35.0% | |
| ATTCCCAAATTGTGGGAAAA+GGG | - | chr6_4:21419395-21419414 | Msa0981840:CDS | 35.0% | |
| ! | ATTCCCTTTTCCCACAATTT+GGG | + | chr6_4:21419401-21419420 | None:intergenic | 35.0% |
| ! | TAAATCCATTTTCACGGTCA+CGG | + | chr6_4:21419627-21419646 | None:intergenic | 35.0% |
| CATTGATAGAGAGAGGATTT+AGG | - | chr6_4:21419655-21419674 | Msa0981840:intron | 35.0% | |
| ! | AGAGGATTTAGGTTTACAAG+CGG | - | chr6_4:21419666-21419685 | Msa0981840:intron | 35.0% |
| !!! | TCCTCGTTTATTTTCAGGTT+CGG | + | chr6_4:21419724-21419743 | None:intergenic | 35.0% |
| TTGTGTGTGAAATAGTGGTT+TGG | - | chr6_4:21419793-21419812 | Msa0981840:intron | 35.0% | |
| !!! | TCGGTTCAACTTTTTTGTTG+TGG | - | chr6_4:21419858-21419877 | Msa0981840:intron | 35.0% |
| !!! | CGGTTCAACTTTTTTGTTGT+GGG | - | chr6_4:21419859-21419878 | Msa0981840:intron | 35.0% |
| TGGGTATTTATTCACGACAA+AGG | - | chr6_4:21419932-21419951 | Msa0981840:intron | 35.0% | |
| !! | CAGAAGCTGTGTTATTGTTT+TGG | - | chr6_4:21420109-21420128 | Msa0981840:intron | 35.0% |
| ! | TCTGATTTTCTCAATACCAG+TGG | + | chr6_4:21420190-21420209 | None:intergenic | 35.0% |
| ! | TGGTATTGAGAAAATCAGAC+AGG | - | chr6_4:21420191-21420210 | Msa0981840:CDS | 35.0% |
| !!! | TGTTCACTTATTTTGATGGG+AGG | + | chr6_4:21420284-21420303 | None:intergenic | 35.0% |
| !!! | TATGTAGATTTTGGGATGGA+TGG | - | chr6_4:21420495-21420514 | Msa0981840:intron | 35.0% |
| !!! | ATGTAGATTTTGGGATGGAT+GGG | - | chr6_4:21420496-21420515 | Msa0981840:intron | 35.0% |
| ACTTATAGCAAGTTAGAGTG+TGG | - | chr6_4:21420544-21420563 | Msa0981840:intron | 35.0% | |
| CTTATAGCAAGTTAGAGTGT+GGG | - | chr6_4:21420545-21420564 | Msa0981840:intron | 35.0% | |
| TGTTATATTGGGGATGTTGA+TGG | - | chr6_4:21420617-21420636 | Msa0981840:intron | 35.0% | |
| AAACAGCAACTACAACAATC+TGG | + | chr6_4:21420751-21420770 | None:intergenic | 35.0% | |
| GAACGTATGCAACCAAAAAT+GGG | - | chr6_4:21420846-21420865 | Msa0981840:intron | 35.0% | |
| GCAACCAAAAATGGGAAAAA+TGG | - | chr6_4:21420854-21420873 | Msa0981840:intron | 35.0% | |
| TCACGAAGGAAAAGAATTTG+AGG | - | chr6_4:21421082-21421101 | Msa0981840:intron | 35.0% | |
| ! | TAACTTTTACTTCACAGGAG+TGG | - | chr6_4:21421234-21421253 | Msa0981840:intron | 35.0% |
| GATCTCTAATGTTGAGCAAT+AGG | - | chr6_4:21421256-21421275 | Msa0981840:intron | 35.0% | |
| AATGTTGAGCAATAGGTGTT+TGG | - | chr6_4:21421263-21421282 | Msa0981840:intron | 35.0% | |
| TTCCACTCAAATCAATCGTT+GGG | + | chr6_4:21421289-21421308 | None:intergenic | 35.0% | |
| ! | CAATCTATGTTTTTCCCATC+AGG | + | chr6_4:21421509-21421528 | None:intergenic | 35.0% |
| AGAAAGACACAAAATGGAGA+AGG | + | chr6_4:21421694-21421713 | None:intergenic | 35.0% | |
| TTCGAGAGAAAGACACAAAA+TGG | + | chr6_4:21421700-21421719 | None:intergenic | 35.0% | |
| TAGATCTTTCGTCAAAAGAG+GGG | + | chr6_4:21421842-21421861 | None:intergenic | 35.0% | |
| CTTAGATCTTTCGTCAAAAG+AGG | + | chr6_4:21421844-21421863 | None:intergenic | 35.0% | |
| GTTTGTATGATGACATTGGT+TGG | - | chr6_4:21422000-21422019 | Msa0981840:intron | 35.0% | |
| ATATTAATAAGCCATGGAGG+AGG | + | chr6_4:21422108-21422127 | None:intergenic | 35.0% | |
| TGCATATTAATAAGCCATGG+AGG | + | chr6_4:21422111-21422130 | None:intergenic | 35.0% | |
| TCCATGGCTTATTAATATGC+AGG | - | chr6_4:21422110-21422129 | Msa0981840:intron | 35.0% | |
| ACCTGCATATTAATAAGCCA+TGG | + | chr6_4:21422114-21422133 | None:intergenic | 35.0% | |
| GGCTTATTAATATGCAGGTA+AGG | - | chr6_4:21422115-21422134 | Msa0981840:intron | 35.0% | |
| TTAATGTACAAGGCCAATAC+AGG | + | chr6_4:21422168-21422187 | None:intergenic | 35.0% | |
| GCTGGTTAATAAGATAAAGG+GGG | + | chr6_4:21422372-21422391 | None:intergenic | 35.0% | |
| TTAGATGAAGATACGTAAGC+TGG | + | chr6_4:21422390-21422409 | None:intergenic | 35.0% | |
| CCAAAAACATCTCCATATAG+TGG | + | chr6_4:21422426-21422445 | None:intergenic | 35.0% | |
| ! | CCACTATATGGAGATGTTTT+TGG | - | chr6_4:21422423-21422442 | Msa0981840:intron | 35.0% |
| GTAATCAAGAAATAGCACTG+AGG | + | chr6_4:21422762-21422781 | None:intergenic | 35.0% | |
| ! | TCTTGATTACTCTTTTGGTG+TGG | - | chr6_4:21422772-21422791 | Msa0981840:intron | 35.0% |
| ATAAAAGGACTGCCTCTTAT+GGG | + | chr6_4:21422827-21422846 | None:intergenic | 35.0% | |
| AATAAAAGGACTGCCTCTTA+TGG | + | chr6_4:21422828-21422847 | None:intergenic | 35.0% | |
| ! | ATAAGAGGCAGTCCTTTTAT+TGG | - | chr6_4:21422827-21422846 | Msa0981840:intron | 35.0% |
| !! | CAGTGTTTAGTCTTATCAAC+TGG | + | chr6_4:21422989-21423008 | None:intergenic | 35.0% |
| !! | CAGTTGATAAGACTAAACAC+TGG | - | chr6_4:21422987-21423006 | Msa0981840:intron | 35.0% |
| ! | GTTGATAAGACTAAACACTG+GGG | - | chr6_4:21422989-21423008 | Msa0981840:intron | 35.0% |
| !! | AGTCTGTTGATAGTCTATCA+AGG | - | chr6_4:21423107-21423126 | Msa0981840:intron | 35.0% |
| ! | TGTAATGTAGGTTTGAAGTG+TGG | - | chr6_4:21423165-21423184 | Msa0981840:intron | 35.0% |
| AAACTAGCAAAATCAAGGTG+AGG | + | chr6_4:21423232-21423251 | None:intergenic | 35.0% | |
| AGATAGATGTGGTGCTTATT+AGG | - | chr6_4:21423469-21423488 | Msa0981840:intron | 35.0% | |
| TGCTTATTAGGTTAGGTACT+TGG | - | chr6_4:21423481-21423500 | Msa0981840:intron | 35.0% | |
| TTAGGGTCTGTTAGGTTTAA+TGG | - | chr6_4:21423548-21423567 | Msa0981840:intron | 35.0% | |
| ! | TGTTAGGTTTAATGGATGAG+AGG | - | chr6_4:21423556-21423575 | Msa0981840:intron | 35.0% |
| ! | GTTAGGTTTAATGGATGAGA+GGG | - | chr6_4:21423557-21423576 | Msa0981840:intron | 35.0% |
| TGACAGTAAATAACTGTACG+GGG | + | chr6_4:21423842-21423861 | None:intergenic | 35.0% | |
| CAAAATGACACAGGAAAAAG+AGG | + | chr6_4:21423883-21423902 | None:intergenic | 35.0% | |
| TCAAGCACCTTCATAGATAA+CGG | + | chr6_4:21424074-21424093 | None:intergenic | 35.0% | |
| AAATTTACATACGTGTGTCC+GGG | + | chr6_4:21424137-21424156 | None:intergenic | 35.0% | |
| ATAACTACAGAGAGGAGAAA+AGG | + | chr6_4:21424238-21424257 | None:intergenic | 35.0% | |
| AGGTCAAAAGTCAGATAAAG+TGG | - | chr6_4:21424415-21424434 | Msa0981840:intron | 35.0% | |
| AGAAAGATGCAAGAAAAGGA+CGG | - | chr6_4:21424768-21424787 | Msa0981840:intron | 35.0% | |
| CGAGGGTTTAAGAGAAATTG+AGG | + | chr6_4:21417644-21417663 | None:intergenic | 40.0% | |
| AGGTTATGCGATAGTAACAG+AGG | + | chr6_4:21417731-21417750 | None:intergenic | 40.0% | |
| ! | TTTTCAGAATGGATCTCCAC+AGG | + | chr6_4:21418500-21418519 | None:intergenic | 40.0% |
| ATTCCTACCTCAACAACATC+AGG | + | chr6_4:21418590-21418609 | None:intergenic | 40.0% | |
| ! | CATAATGGCCTTGAAAGAAG+GGG | + | chr6_4:21418651-21418670 | None:intergenic | 40.0% |
| ! | GCATAATGGCCTTGAAAGAA+GGG | + | chr6_4:21418652-21418671 | None:intergenic | 40.0% |
| ! | TGCATAATGGCCTTGAAAGA+AGG | + | chr6_4:21418653-21418672 | None:intergenic | 40.0% |
| TGTATGTATGTGGTTCTTGC+AGG | - | chr6_4:21418936-21418955 | Msa0981840:intron | 40.0% | |
| GTATGTATGTGGTTCTTGCA+GGG | - | chr6_4:21418937-21418956 | Msa0981840:intron | 40.0% | |
| TATGTATGTGGTTCTTGCAG+GGG | - | chr6_4:21418938-21418957 | Msa0981840:intron | 40.0% | |
| ACTGGTAGGTGTTTGGAAAT+GGG | - | chr6_4:21418988-21419007 | Msa0981840:intron | 40.0% | |
| GATGGATGAAACAGTGGTTA+TGG | - | chr6_4:21419341-21419360 | Msa0981840:intron | 40.0% | |
| ! | CATTCCCTTTTCCCACAATT+TGG | + | chr6_4:21419402-21419421 | None:intergenic | 40.0% |
| ATTGTGGGAAAAGGGAATGT+TGG | - | chr6_4:21419403-21419422 | Msa0981840:CDS | 40.0% | |
| GCGACTATGTTTAACTCACT+AGG | + | chr6_4:21419484-21419503 | None:intergenic | 40.0% | |
| !!! | CCACGTAGTTTTAGAAGTCA+GGG | + | chr6_4:21419511-21419530 | None:intergenic | 40.0% |
| !!! | ACCACGTAGTTTTAGAAGTC+AGG | + | chr6_4:21419512-21419531 | None:intergenic | 40.0% |
| TTGTTTGAACAAACCTCGTG+AGG | - | chr6_4:21419532-21419551 | Msa0981840:intron | 40.0% | |
| TGTTTGAACAAACCTCGTGA+GGG | - | chr6_4:21419533-21419552 | Msa0981840:intron | 40.0% | |
| ! | GTGACCGTGAAAATGGATTT+AGG | - | chr6_4:21419626-21419645 | Msa0981840:intron | 40.0% |
| GATTCGTCATTGATAGAGAG+AGG | - | chr6_4:21419648-21419667 | Msa0981840:intron | 40.0% | |
| TTAGGTTTACAAGCGGATCT+TGG | - | chr6_4:21419673-21419692 | Msa0981840:intron | 40.0% | |
| ACCGAACCTGAAAATAAACG+AGG | - | chr6_4:21419720-21419739 | Msa0981840:intron | 40.0% | |
| !!! | TCAACTTTTTTGTTGTGGGC+AGG | - | chr6_4:21419863-21419882 | Msa0981840:intron | 40.0% |
| GAGCATTAAGCACAATGGAA+AGG | + | chr6_4:21419989-21420008 | None:intergenic | 40.0% | |
| TTCCATTGTGCTTAATGCTC+AGG | - | chr6_4:21419989-21420008 | Msa0981840:intron | 40.0% | |
| !!! | AGCTGTGTTATTGTTTTGGC+AGG | - | chr6_4:21420113-21420132 | Msa0981840:intron | 40.0% |
| !!! | GCTGTGTTATTGTTTTGGCA+GGG | - | chr6_4:21420114-21420133 | Msa0981840:intron | 40.0% |
| !!! | CTGTGTTATTGTTTTGGCAG+GGG | - | chr6_4:21420115-21420134 | Msa0981840:intron | 40.0% |
| GCAGTAGAATAAGCATCTGA+TGG | + | chr6_4:21420370-21420389 | None:intergenic | 40.0% | |
| TAAATAGGTAGCTGGGAAGT+TGG | - | chr6_4:21420457-21420476 | Msa0981840:intron | 40.0% | |
| AAATTCAACAGAGGGACACA+AGG | + | chr6_4:21420648-21420667 | None:intergenic | 40.0% | |
| GCAGGCTTATATTGAGAAAG+AGG | - | chr6_4:21420794-21420813 | Msa0981840:intron | 40.0% | |
| GGAACGTATGCAACCAAAAA+TGG | - | chr6_4:21420845-21420864 | Msa0981840:intron | 40.0% | |
| !! | ATGTCAGCTTTGGCTTTGTT+TGG | + | chr6_4:21421046-21421065 | None:intergenic | 40.0% |
| ! | GTAGTGTTAGGCTAGTTCTT+AGG | - | chr6_4:21421202-21421221 | Msa0981840:intron | 40.0% |
| GTTCCACTCAAATCAATCGT+TGG | + | chr6_4:21421290-21421309 | None:intergenic | 40.0% | |
| ! | TCTATGTTTTTCCCATCAGG+TGG | + | chr6_4:21421506-21421525 | None:intergenic | 40.0% |
| AGACACAAAATGGAGAAGGA+GGG | + | chr6_4:21421690-21421709 | None:intergenic | 40.0% | |
| AAGACACAAAATGGAGAAGG+AGG | + | chr6_4:21421691-21421710 | None:intergenic | 40.0% | |
| CAAGAGAGAGAGACACAAAA+TGG | - | chr6_4:21421785-21421804 | Msa0981840:intron | 40.0% | |
| ATGGAGGAGAGAATGAGATA+AGG | - | chr6_4:21421804-21421823 | Msa0981840:intron | 40.0% | |
| CTAACGCTCAACTAGATCAA+TGG | + | chr6_4:21421903-21421922 | None:intergenic | 40.0% | |
| TGAAAACTTGTGAATGTGCC+TGG | + | chr6_4:21421930-21421949 | None:intergenic | 40.0% | |
| AAGTCGTGTGATAACATACC+AGG | + | chr6_4:21422054-21422073 | None:intergenic | 40.0% | |
| ! | AGAAAGTATACTTCGTCGAC+AGG | + | chr6_4:21422322-21422341 | None:intergenic | 40.0% |
| ACAAGATCAGCCTAACTATG+AGG | - | chr6_4:21422452-21422471 | Msa0981840:intron | 40.0% | |
| !! | TGATTACTCTTTTGGTGTGG+CGG | - | chr6_4:21422775-21422794 | Msa0981840:intron | 40.0% |
| CTCTTATGGGTGAAAAGAGA+AGG | + | chr6_4:21422814-21422833 | None:intergenic | 40.0% | |
| ! | CTTCTCTTTTCACCCATAAG+AGG | - | chr6_4:21422812-21422831 | Msa0981840:intron | 40.0% |
| GAAGAGGAGGAATTTGAAGA+TGG | - | chr6_4:21423079-21423098 | Msa0981840:intron | 40.0% | |
| ! | ATGTAGGTTTGAAGTGTGGT+TGG | - | chr6_4:21423169-21423188 | Msa0981840:intron | 40.0% |
| ! | AGAACACCCACACTTTCTTT+TGG | + | chr6_4:21423203-21423222 | None:intergenic | 40.0% |
| GATGTGGTGCTTATTAGGTT+AGG | - | chr6_4:21423474-21423493 | Msa0981840:intron | 40.0% | |
| AAACCTAACAGACCCTAAGT+GGG | + | chr6_4:21423546-21423565 | None:intergenic | 40.0% | |
| TAAACCTAACAGACCCTAAG+TGG | + | chr6_4:21423547-21423566 | None:intergenic | 40.0% | |
| ! | GTTTAATGGATGAGAGGGAA+GGG | - | chr6_4:21423562-21423581 | Msa0981840:intron | 40.0% |
| ! | TGAGAGGGAAGGGATTTTAA+TGG | - | chr6_4:21423572-21423591 | Msa0981840:intron | 40.0% |
| !! | AGGGAAGGGATTTTAATGGA+AGG | - | chr6_4:21423576-21423595 | Msa0981840:intron | 40.0% |
| !! | GGGAAGGGATTTTAATGGAA+GGG | - | chr6_4:21423577-21423596 | Msa0981840:intron | 40.0% |
| !! | AAGGGATTTTAATGGAAGGG+AGG | - | chr6_4:21423580-21423599 | Msa0981840:intron | 40.0% |
| !! | AGGGATTTTAATGGAAGGGA+GGG | - | chr6_4:21423581-21423600 | Msa0981840:intron | 40.0% |
| ! | ATACCGTGTTTGGTTCAACA+TGG | - | chr6_4:21423618-21423637 | Msa0981840:intron | 40.0% |
| ! | TACCGTGTTTGGTTCAACAT+GGG | - | chr6_4:21423619-21423638 | Msa0981840:intron | 40.0% |
| AAAAAAGTGGGGGACTTAGA+GGG | + | chr6_4:21423753-21423772 | None:intergenic | 40.0% | |
| !!! | TTTTTTTAGAGGGAAGGGGA+GGG | + | chr6_4:21423785-21423804 | None:intergenic | 40.0% |
| !!! | TTTTTTTTAGAGGGAAGGGG+AGG | + | chr6_4:21423786-21423805 | None:intergenic | 40.0% |
| AGTAAATAACTGTACGGGGA+TGG | + | chr6_4:21423838-21423857 | None:intergenic | 40.0% | |
| TGACACAGGAAAAAGAGGTA+AGG | + | chr6_4:21423878-21423897 | None:intergenic | 40.0% | |
| CACCTGATGTTATTGACCTA+CGG | - | chr6_4:21423928-21423947 | Msa0981840:CDS | 40.0% | |
| TTCCGTAGGTCAATAACATC+AGG | + | chr6_4:21423933-21423952 | None:intergenic | 40.0% | |
| ! | TATTTCTCTGTTGCTTCCGT+AGG | + | chr6_4:21423947-21423966 | None:intergenic | 40.0% |
| ACGGAAGCAACAGAGAAATA+AGG | - | chr6_4:21423947-21423966 | Msa0981840:intron | 40.0% | |
| ACTTGATAAAGAGGCTTCTC+AGG | + | chr6_4:21423975-21423994 | None:intergenic | 40.0% | |
| TTCTCCTCTCTGTAGTTATG+TGG | - | chr6_4:21424239-21424258 | Msa0981840:intron | 40.0% | |
| TTTAGCACCCGATTTATCCT+GGG | + | chr6_4:21424277-21424296 | None:intergenic | 40.0% | |
| ! | TTTTAGCACCCGATTTATCC+TGG | + | chr6_4:21424278-21424297 | None:intergenic | 40.0% |
| AGGATAAATCGGGTGCTAAA+AGG | - | chr6_4:21424277-21424296 | Msa0981840:intron | 40.0% | |
| GGATAAATCGGGTGCTAAAA+GGG | - | chr6_4:21424278-21424297 | Msa0981840:intron | 40.0% | |
| !! | TTCCAGGTCGATTTGCTTAA+AGG | - | chr6_4:21424395-21424414 | Msa0981840:intron | 40.0% |
| TCTTACCTCTGGATTTATGC+AGG | - | chr6_4:21424558-21424577 | Msa0981840:intron | 40.0% | |
| TCATACCTGCATAAATCCAG+AGG | + | chr6_4:21424566-21424585 | None:intergenic | 40.0% | |
| TCTGGATTTATGCAGGTATG+AGG | - | chr6_4:21424565-21424584 | Msa0981840:intron | 40.0% | |
| GCAGTCCCATATGATTAGTA+GGG | + | chr6_4:21424666-21424685 | None:intergenic | 40.0% | |
| TGCAGTCCCATATGATTAGT+AGG | + | chr6_4:21424667-21424686 | None:intergenic | 40.0% | |
| TTCTCTTAAACCCTCGACGA+TGG | - | chr6_4:21417648-21417667 | Msa0981840:three_prime_UTR | 45.0% | |
| CCTTCAAAGTCTACCTTCTC+TGG | + | chr6_4:21418133-21418152 | None:intergenic | 45.0% | |
| CCAGAGAAGGTAGACTTTGA+AGG | - | chr6_4:21418130-21418149 | Msa0981840:intron | 45.0% | |
| ! | GAAGGTAGACTTTGAAGGCA+TGG | - | chr6_4:21418135-21418154 | Msa0981840:intron | 45.0% |
| GGACACTGATAAGAAGGATG+AGG | - | chr6_4:21418308-21418327 | Msa0981840:intron | 45.0% | |
| CACTGATAAGAAGGATGAGG+CGG | - | chr6_4:21418311-21418330 | Msa0981840:intron | 45.0% | |
| CTCAAGACCTGATGTTGTTG+AGG | - | chr6_4:21418580-21418599 | Msa0981840:intron | 45.0% | |
| AGACCTGATGTTGTTGAGGT+AGG | - | chr6_4:21418584-21418603 | Msa0981840:intron | 45.0% | |
| TTGGGTATCCCCTTCTTTCA+AGG | - | chr6_4:21418640-21418659 | Msa0981840:intron | 45.0% | |
| ! | CTTTTCTGTGACCAATGCCT+AGG | + | chr6_4:21418775-21418794 | None:intergenic | 45.0% |
| GACTGGTAGGTGTTTGGAAA+TGG | - | chr6_4:21418987-21419006 | Msa0981840:intron | 45.0% | |
| TTTGGCGATGGATGAAACAG+TGG | - | chr6_4:21419335-21419354 | Msa0981840:intron | 45.0% | |
| !! | CCCTGACTTCTAAAACTACG+TGG | - | chr6_4:21419508-21419527 | Msa0981840:intron | 45.0% |
| AGCCTGAGCATTAAGCACAA+TGG | + | chr6_4:21419994-21420013 | None:intergenic | 45.0% | |
| !! | ATCTGAAGTGTTGTGCATGC+AGG | - | chr6_4:21420776-21420795 | Msa0981840:intron | 45.0% |
| TTCGTGATACAACTCCCCAA+GGG | + | chr6_4:21421069-21421088 | None:intergenic | 45.0% | |
| TTTGTTTCCCACCACCTGAT+GGG | - | chr6_4:21421492-21421511 | Msa0981840:intron | 45.0% | |
| ! | TGTTTTTCCCATCAGGTGGT+GGG | + | chr6_4:21421502-21421521 | None:intergenic | 45.0% |
| ! | ATGTTTTTCCCATCAGGTGG+TGG | + | chr6_4:21421503-21421522 | None:intergenic | 45.0% |
| GAGAAGAAGAGAATGGGAGA+AGG | + | chr6_4:21421668-21421687 | None:intergenic | 45.0% | |
| AGGAGGGAGAAGAAGAGAAT+GGG | + | chr6_4:21421674-21421693 | None:intergenic | 45.0% | |
| AAGGAGGGAGAAGAAGAGAA+TGG | + | chr6_4:21421675-21421694 | None:intergenic | 45.0% | |
| GAGAGAGAGACACAAAATGG+AGG | - | chr6_4:21421788-21421807 | Msa0981840:intron | 45.0% | |
| GGAGAGAATGAGATAAGGAG+AGG | - | chr6_4:21421809-21421828 | Msa0981840:intron | 45.0% | |
| TAGTTGAGCGTTAGTGATCC+AGG | - | chr6_4:21421909-21421928 | Msa0981840:intron | 45.0% | |
| TTGGTGTGCAGGTAAAGTTG+AGG | - | chr6_4:21422019-21422038 | Msa0981840:intron | 45.0% | |
| TGGTGTGCAGGTAAAGTTGA+GGG | - | chr6_4:21422020-21422039 | Msa0981840:intron | 45.0% | |
| AAGTTGAGGGAGATGAAACC+TGG | - | chr6_4:21422033-21422052 | Msa0981840:intron | 45.0% | |
| CACGACTTGAAAGAAGCTCT+TGG | - | chr6_4:21422066-21422085 | Msa0981840:intron | 45.0% | |
| ATCTTCAGCTGAGGGTAAGA+TGG | + | chr6_4:21422229-21422248 | None:intergenic | 45.0% | |
| ATAACCAAAGCTAGCTCCAG+CGG | + | chr6_4:21422275-21422294 | None:intergenic | 45.0% | |
| !! | GCTAGCTTTGGTTATCATCC+TGG | - | chr6_4:21422280-21422299 | Msa0981840:CDS | 45.0% |
| ! | AGCTTTGGTTATCATCCTGG+TGG | - | chr6_4:21422283-21422302 | Msa0981840:CDS | 45.0% |
| TTGGTTATCATCCTGGTGGA+TGG | - | chr6_4:21422287-21422306 | Msa0981840:CDS | 45.0% | |
| ! | TGGTTATCATCCTGGTGGAT+GGG | - | chr6_4:21422288-21422307 | Msa0981840:CDS | 45.0% |
| AAGTATACTTCGTCGACAGG+AGG | + | chr6_4:21422319-21422338 | None:intergenic | 45.0% | |
| GACTAAACACTGGGGTGATT+TGG | - | chr6_4:21422997-21423016 | Msa0981840:intron | 45.0% | |
| ! | TAAACACTGGGGTGATTTGG+AGG | - | chr6_4:21423000-21423019 | Msa0981840:intron | 45.0% |
| GGAAGAAGAGGAAGAAGAAG+AGG | - | chr6_4:21423033-21423052 | Msa0981840:intron | 45.0% | |
| AGAAGAGGAAGAAGAAGAGG+AGG | - | chr6_4:21423036-21423055 | Msa0981840:intron | 45.0% | |
| GGAAGAAGAAGGAATGGAAG+AGG | - | chr6_4:21423063-21423082 | Msa0981840:intron | 45.0% | |
| AGAAGAAGGAATGGAAGAGG+AGG | - | chr6_4:21423066-21423085 | Msa0981840:intron | 45.0% | |
| ! | GGTACTGGGTTAGATAGATG+TGG | - | chr6_4:21423458-21423477 | Msa0981840:intron | 45.0% |
| ! | GGTTTAATGGATGAGAGGGA+AGG | - | chr6_4:21423561-21423580 | Msa0981840:intron | 45.0% |
| !! | GGGATTTTAATGGAAGGGAG+GGG | - | chr6_4:21423582-21423601 | Msa0981840:intron | 45.0% |
| !! | GGATTTTAATGGAAGGGAGG+GGG | - | chr6_4:21423583-21423602 | Msa0981840:intron | 45.0% |
| !! | GATTTTAATGGAAGGGAGGG+GGG | - | chr6_4:21423584-21423603 | Msa0981840:intron | 45.0% |
| CTCCCATGTTGAACCAAACA+CGG | + | chr6_4:21423624-21423643 | None:intergenic | 45.0% | |
| ! | GTGTTTGGTTCAACATGGGA+GGG | - | chr6_4:21423623-21423642 | Msa0981840:intron | 45.0% |
| ! | TGTTTGGTTCAACATGGGAG+GGG | - | chr6_4:21423624-21423643 | Msa0981840:intron | 45.0% |
| TCAACATGGGAGGGGTTTAA+TGG | - | chr6_4:21423632-21423651 | Msa0981840:intron | 45.0% | |
| AAAAAGTGGGGGACTTAGAG+GGG | + | chr6_4:21423752-21423771 | None:intergenic | 45.0% | |
| CAAAAAAGTGGGGGACTTAG+AGG | + | chr6_4:21423754-21423773 | None:intergenic | 45.0% | |
| GCAAGAGAGCAAAAAAGTGG+GGG | + | chr6_4:21423763-21423782 | None:intergenic | 45.0% | |
| GGCAAGAGAGCAAAAAAGTG+GGG | + | chr6_4:21423764-21423783 | None:intergenic | 45.0% | |
| GGGCAAGAGAGCAAAAAAGT+GGG | + | chr6_4:21423765-21423784 | None:intergenic | 45.0% | |
| AGGGCAAGAGAGCAAAAAAG+TGG | + | chr6_4:21423766-21423785 | None:intergenic | 45.0% | |
| ! | AGTGCTGAGCAAAATGACAC+AGG | + | chr6_4:21423892-21423911 | None:intergenic | 45.0% |
| ! | ATTTTGCTCAGCACTCCTAC+TGG | - | chr6_4:21423897-21423916 | Msa0981840:CDS | 45.0% |
| GCAGGATCTTTACTTGTACC+CGG | - | chr6_4:21424116-21424135 | Msa0981840:CDS | 45.0% | |
| CCAACCACATAACTACAGAG+AGG | + | chr6_4:21424246-21424265 | None:intergenic | 45.0% | |
| CCTCTCTGTAGTTATGTGGT+TGG | - | chr6_4:21424243-21424262 | Msa0981840:intron | 45.0% | |
| TGTAGTTATGTGGTTGGCAC+TGG | - | chr6_4:21424249-21424268 | Msa0981840:intron | 45.0% | |
| GACCTTTAAGCAAATCGACC+TGG | + | chr6_4:21424400-21424419 | None:intergenic | 45.0% | |
| TATGCAGGTATGAGGAAGCT+AGG | - | chr6_4:21424573-21424592 | Msa0981840:intron | 45.0% | |
| ATGCAGGTATGAGGAAGCTA+GGG | - | chr6_4:21424574-21424593 | Msa0981840:intron | 45.0% | |
| GCGAGAAGATTTCAGTGACA+TGG | - | chr6_4:21424619-21424638 | Msa0981840:intron | 45.0% | |
| TTTCAGTGACATGGTTGCAG+AGG | - | chr6_4:21424628-21424647 | Msa0981840:intron | 45.0% | |
| TAGCTATAACTGTTTCGGGC+AGG | - | chr6_4:21424911-21424930 | Msa0981840:five_prime_UTR | 45.0% | |
| !! | AAAAAAAAAAAATCAATTAA+GGG | + | chr6_4:21418222-21418241 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAATCAATTA+AGG | + | chr6_4:21418223-21418242 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTATAGAA+TGG | - | chr6_4:21419284-21419303 | Msa0981840:intron | 5.0% |
| !!! | TTATTTTACTTATATATTAT+TGG | - | chr6_4:21421967-21421986 | Msa0981840:intron | 5.0% |
| TTTCCTTGATGTGAAGGCGG+TGG | - | chr6_4:21417553-21417572 | Msa0981840:three_prime_UTR | 50.0% | |
| AATCCACCGCCTTCACATCA+AGG | + | chr6_4:21417559-21417578 | None:intergenic | 50.0% | |
| !! | GCAACGACTCCGTTTTGGTA+AGG | + | chr6_4:21417688-21417707 | None:intergenic | 50.0% |
| TGCAGCAGATCCTAAGTTGC+TGG | - | chr6_4:21418714-21418733 | Msa0981840:intron | 50.0% | |
| GGAACACTGTACCTGTACCT+AGG | - | chr6_4:21418755-21418774 | Msa0981840:intron | 50.0% | |
| CTGTACCTGTACCTAGGCAT+TGG | - | chr6_4:21418761-21418780 | Msa0981840:intron | 50.0% | |
| TGTGACCAATGCCTAGGTAC+AGG | + | chr6_4:21418769-21418788 | None:intergenic | 50.0% | |
| ATCACCAATCCTCGACTGGT+AGG | - | chr6_4:21418974-21418993 | Msa0981840:intron | 50.0% | |
| AACACCTACCAGTCGAGGAT+TGG | + | chr6_4:21418981-21419000 | None:intergenic | 50.0% | |
| ATCCTCGACTGGTAGGTGTT+TGG | - | chr6_4:21418981-21419000 | Msa0981840:intron | 50.0% | |
| TTCCAAACACCTACCAGTCG+AGG | + | chr6_4:21418986-21419005 | None:intergenic | 50.0% | |
| TCGTGAGGGAGAAGTAGCTT+GGG | - | chr6_4:21419547-21419566 | Msa0981840:intron | 50.0% | |
| ACAGACCGTGACCGTGAAAA+TGG | - | chr6_4:21419619-21419638 | Msa0981840:intron | 50.0% | |
| TTGTTGTGGGCAGGCCTAAT+TGG | - | chr6_4:21419872-21419891 | Msa0981840:intron | 50.0% | |
| TGTTGTGGGCAGGCCTAATT+GGG | - | chr6_4:21419873-21419892 | Msa0981840:intron | 50.0% | |
| !!! | TTGTTTTGGCAGGGGAAACG+AGG | - | chr6_4:21420123-21420142 | Msa0981840:intron | 50.0% |
| CCAGTGGCAGCAATGAAATC+AGG | + | chr6_4:21420174-21420193 | None:intergenic | 50.0% | |
| CCTGATTTCATTGCTGCCAC+TGG | - | chr6_4:21420171-21420190 | Msa0981840:CDS | 50.0% | |
| !!! | TTTTGGGATGGATGGGTTGC+TGG | - | chr6_4:21420503-21420522 | Msa0981840:intron | 50.0% |
| AAGCCAAAGCTGACATCCCT+TGG | - | chr6_4:21421050-21421069 | Msa0981840:intron | 50.0% | |
| AGCCAAAGCTGACATCCCTT+GGG | - | chr6_4:21421051-21421070 | Msa0981840:intron | 50.0% | |
| CTTCGTGATACAACTCCCCA+AGG | + | chr6_4:21421070-21421089 | None:intergenic | 50.0% | |
| CTTGGGGAGTTGTATCACGA+AGG | - | chr6_4:21421068-21421087 | Msa0981840:intron | 50.0% | |
| !! | GGCCCAACGATTGATTTGAG+TGG | - | chr6_4:21421284-21421303 | Msa0981840:intron | 50.0% |
| GTTTGTTTCCCACCACCTGA+TGG | - | chr6_4:21421491-21421510 | Msa0981840:intron | 50.0% | |
| GAAGAGAATGGGAGAAGGAG+AGG | + | chr6_4:21421663-21421682 | None:intergenic | 50.0% | |
| CTTTCGTCAAAAGAGGGGCT+TGG | + | chr6_4:21421837-21421856 | None:intergenic | 50.0% | |
| ! | GATGACATTGGTTGGTGTGC+AGG | - | chr6_4:21422008-21422027 | Msa0981840:intron | 50.0% |
| AGAAGCTCTTGGTATGCCTG+AGG | - | chr6_4:21422077-21422096 | Msa0981840:intron | 50.0% | |
| GAAGCTCTTGGTATGCCTGA+GGG | - | chr6_4:21422078-21422097 | Msa0981840:intron | 50.0% | |
| TGGTGGAGGACCATATCTCT+GGG | + | chr6_4:21422209-21422228 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGGACCATATCTC+TGG | + | chr6_4:21422210-21422229 | None:intergenic | 50.0% |
| TTCAGCTGAGGGTAAGATGG+TGG | + | chr6_4:21422226-21422245 | None:intergenic | 50.0% | |
| !! | GTATGGGAGCATTCAGTCCT+GGG | + | chr6_4:21422252-21422271 | None:intergenic | 50.0% |
| TAACCAAAGCTAGCTCCAGC+GGG | + | chr6_4:21422274-21422293 | None:intergenic | 50.0% | |
| ! | GGTTATCATCCTGGTGGATG+GGG | - | chr6_4:21422289-21422308 | Msa0981840:CDS | 50.0% |
| CAGTATGGACGCCCACTATA+TGG | - | chr6_4:21422411-21422430 | Msa0981840:intron | 50.0% | |
| TGCTGGTGTCCTCATTATGC+AGG | - | chr6_4:21422958-21422977 | Msa0981840:intron | 50.0% | |
| ! | CTGGCTCTTCCTGCATAATG+AGG | + | chr6_4:21422970-21422989 | None:intergenic | 50.0% |
| AGAGGAAGAAGAAGAGGAGG+AGG | - | chr6_4:21423039-21423058 | Msa0981840:intron | 50.0% | |
| GGAGGAGGAAGAAGAAGGAA+TGG | - | chr6_4:21423057-21423076 | Msa0981840:intron | 50.0% | |
| TGGATATGCAGGTCCCACTT+AGG | - | chr6_4:21423530-21423549 | Msa0981840:intron | 50.0% | |
| GGATATGCAGGTCCCACTTA+GGG | - | chr6_4:21423531-21423550 | Msa0981840:intron | 50.0% | |
| ! | CGTGTTTGGTTCAACATGGG+AGG | - | chr6_4:21423622-21423641 | Msa0981840:intron | 50.0% |
| CACTGGCACCCAGGATAAAT+CGG | - | chr6_4:21424266-21424285 | Msa0981840:intron | 50.0% | |
| ACTGGCACCCAGGATAAATC+GGG | - | chr6_4:21424267-21424286 | Msa0981840:intron | 50.0% | |
| ! | AGTGGACGTCACTTTACTGC+CGG | - | chr6_4:21424433-21424452 | Msa0981840:intron | 50.0% |
| CACTTTACTGCCGGAAGAGT+TGG | - | chr6_4:21424442-21424461 | Msa0981840:intron | 50.0% | |
| TCCATGGCTTCCAACTCTTC+CGG | + | chr6_4:21424455-21424474 | None:intergenic | 50.0% | |
| ! | GGCAGGCAGAACATTTTCCA+TGG | + | chr6_4:21424471-21424490 | None:intergenic | 50.0% |
| TAAACCCTCGACGATGGCTG+CGG | - | chr6_4:21417654-21417673 | Msa0981840:exon | 55.0% | |
| ATGTGGTTCTTGCAGGGGAG+CGG | - | chr6_4:21418943-21418962 | Msa0981840:intron | 55.0% | |
| GGCAATCACCAATCCTCGAC+TGG | - | chr6_4:21418970-21418989 | Msa0981840:intron | 55.0% | |
| CAAGCTACTTCTCCCTCACG+AGG | + | chr6_4:21419548-21419567 | None:intergenic | 55.0% | |
| CTCGTGAGGGAGAAGTAGCT+TGG | - | chr6_4:21419546-21419565 | Msa0981840:intron | 55.0% | |
| GTTGTGGGCAGGCCTAATTG+GGG | - | chr6_4:21419874-21419893 | Msa0981840:intron | 55.0% | |
| GCCAAAGCTGACATCCCTTG+GGG | - | chr6_4:21421052-21421071 | Msa0981840:intron | 55.0% | |
| TCCCCAAGGGATGTCAGCTT+TGG | + | chr6_4:21421056-21421075 | None:intergenic | 55.0% | |
| GGTGGAGGACCATATCTCTG+GGG | + | chr6_4:21422208-21422227 | None:intergenic | 55.0% | |
| ! | AGCTGAGGGTAAGATGGTGG+AGG | + | chr6_4:21422223-21422242 | None:intergenic | 55.0% |
| TACCCTCAGCTGAAGATCCC+AGG | - | chr6_4:21422232-21422251 | Msa0981840:intron | 55.0% | |
| GTCCTGGGATCTTCAGCTGA+GGG | + | chr6_4:21422237-21422256 | None:intergenic | 55.0% | |
| AGTCCTGGGATCTTCAGCTG+AGG | + | chr6_4:21422238-21422257 | None:intergenic | 55.0% | |
| !! | GGTATGGGAGCATTCAGTCC+TGG | + | chr6_4:21422253-21422272 | None:intergenic | 55.0% |
| AAGCTAGCTCCAGCGGGTAT+GGG | + | chr6_4:21422268-21422287 | None:intergenic | 55.0% | |
| AAAGCTAGCTCCAGCGGGTA+TGG | + | chr6_4:21422269-21422288 | None:intergenic | 55.0% | |
| ! | ATACCCGCTGGAGCTAGCTT+TGG | - | chr6_4:21422268-21422287 | Msa0981840:intron | 55.0% |
| ! | ACACTGGGGTGATTTGGAGG+AGG | - | chr6_4:21423003-21423022 | Msa0981840:intron | 55.0% |
| ! | TGATTTGGAGGAGGAGGAGG+AGG | - | chr6_4:21423012-21423031 | Msa0981840:intron | 55.0% |
| GGAAGAAGAAGAGGAGGAGG+AGG | - | chr6_4:21423042-21423061 | Msa0981840:intron | 55.0% | |
| GAGGAGGAGGAGGAAGAAGA+AGG | - | chr6_4:21423022-21423041 | Msa0981840:intron | 55.0% | |
| GGTCCCACTTAGGGTCTGTT+AGG | - | chr6_4:21423540-21423559 | Msa0981840:intron | 55.0% | |
| TCAGGTGTCTCCACTCCAGT+AGG | + | chr6_4:21423915-21423934 | None:intergenic | 55.0% | |
| CAGGTATGAGGAAGCTAGGG+AGG | - | chr6_4:21424577-21424596 | Msa0981840:intron | 55.0% | |
| GGACGGCAAGTCGAAGAAGA+AGG | - | chr6_4:21424785-21424804 | Msa0981840:CDS | 55.0% | |
| GTTACCGCAGCCATCGTCGA+GGG | + | chr6_4:21417661-21417680 | None:intergenic | 60.0% | |
| TGTTACCGCAGCCATCGTCG+AGG | + | chr6_4:21417662-21417681 | None:intergenic | 60.0% | |
| ! | CCTGCGCAACGACTCCGTTT+TGG | + | chr6_4:21417693-21417712 | None:intergenic | 60.0% |
| CCAAAACGGAGTCGTTGCGC+AGG | - | chr6_4:21417690-21417709 | Msa0981840:CDS | 60.0% | |
| CGCGAGATTTGCGACTCCTG+AGG | - | chr6_4:21419595-21419614 | Msa0981840:intron | 60.0% | |
| ACGGTCACGGTCTGTTCCTC+AGG | + | chr6_4:21419614-21419633 | None:intergenic | 60.0% | |
| CTGAATGCTCCCATACCCGC+TGG | - | chr6_4:21422256-21422275 | Msa0981840:intron | 60.0% | |
| ! | CTGGGGTGATTTGGAGGAGG+AGG | - | chr6_4:21423006-21423025 | Msa0981840:intron | 60.0% |
| ! | GGGTGATTTGGAGGAGGAGG+AGG | - | chr6_4:21423009-21423028 | Msa0981840:intron | 60.0% |
| GGAGGAGGAGGAGGAAGAAG+AGG | - | chr6_4:21423021-21423040 | Msa0981840:intron | 60.0% | |
| GCTCAGCACTCCTACTGGAG+TGG | - | chr6_4:21423902-21423921 | Msa0981840:CDS | 60.0% | |
| GCCGGAAGAGTTGGAAGCCA+TGG | - | chr6_4:21424451-21424470 | Msa0981840:intron | 60.0% | |
| TTCTTGCAGGGGAGCGGCTG+TGG | - | chr6_4:21418949-21418968 | Msa0981840:intron | 65.0% | |
| !! | CATGGAGGAGGAGCACCCTC+AGG | + | chr6_4:21422096-21422115 | None:intergenic | 65.0% |
| !! | CTGAGGGTGCTCCTCCTCCA+TGG | - | chr6_4:21422094-21422113 | Msa0981840:intron | 65.0% |
| !! | TGTGGTTGGCACTGGCACCC+AGG | - | chr6_4:21424257-21424276 | Msa0981840:intron | 65.0% |
| GGAGGCTTGCCCCATCCACC+AGG | + | chr6_4:21422301-21422320 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 21417552 | 21424939 | 21417552 | ID=Msa0981840;Name=Msa0981840 |
| chr6_4 | mRNA | 21417552 | 21424939 | 21417552 | ID=Msa0981840-mRNA-1;Parent=Msa0981840;Name=Msa0981840-mRNA-1;_AED=0.14;_eAED=0.14;_QI=115|1|1|1|1|1|18|118|520 |
| chr6_4 | exon | 21417552 | 21417741 | 21417552 | ID=Msa0981840-mRNA-1:exon:6627;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21417842 | 21417911 | 21417842 | ID=Msa0981840-mRNA-1:exon:6626;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21417999 | 21418090 | 21417999 | ID=Msa0981840-mRNA-1:exon:6625;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21418192 | 21418237 | 21418192 | ID=Msa0981840-mRNA-1:exon:6624;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21418347 | 21418405 | 21418347 | ID=Msa0981840-mRNA-1:exon:6623;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21418499 | 21418583 | 21418499 | ID=Msa0981840-mRNA-1:exon:6622;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21419363 | 21419511 | 21419363 | ID=Msa0981840-mRNA-1:exon:6621;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21420018 | 21420077 | 21420018 | ID=Msa0981840-mRNA-1:exon:6620;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21420161 | 21420280 | 21420161 | ID=Msa0981840-mRNA-1:exon:6619;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21420360 | 21420461 | 21420360 | ID=Msa0981840-mRNA-1:exon:6618;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21421388 | 21421474 | 21421388 | ID=Msa0981840-mRNA-1:exon:6617;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21421601 | 21421693 | 21421601 | ID=Msa0981840-mRNA-1:exon:6616;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21422279 | 21422356 | 21422279 | ID=Msa0981840-mRNA-1:exon:6615;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21423684 | 21423791 | 21423684 | ID=Msa0981840-mRNA-1:exon:6614;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21423890 | 21423952 | 21423890 | ID=Msa0981840-mRNA-1:exon:6613;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21424057 | 21424182 | 21424057 | ID=Msa0981840-mRNA-1:exon:6612;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21424284 | 21424391 | 21424284 | ID=Msa0981840-mRNA-1:exon:6611;Parent=Msa0981840-mRNA-1 |
| chr6_4 | exon | 21424780 | 21424939 | 21424780 | ID=Msa0981840-mRNA-1:exon:6610;Parent=Msa0981840-mRNA-1 |
| chr6_4 | five_prime_UTR | 21424825 | 21424939 | 21424825 | ID=Msa0981840-mRNA-1:five_prime_utr;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21424780 | 21424824 | 21424780 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21424284 | 21424391 | 21424284 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21424057 | 21424182 | 21424057 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21423890 | 21423952 | 21423890 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21423684 | 21423791 | 21423684 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21422279 | 21422356 | 21422279 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21421601 | 21421693 | 21421601 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21421388 | 21421474 | 21421388 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21420360 | 21420461 | 21420360 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21420161 | 21420280 | 21420161 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21420018 | 21420077 | 21420018 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21419363 | 21419511 | 21419363 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21418499 | 21418583 | 21418499 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21418347 | 21418405 | 21418347 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21418192 | 21418237 | 21418192 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21417999 | 21418090 | 21417999 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21417842 | 21417911 | 21417842 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | CDS | 21417670 | 21417741 | 21417670 | ID=Msa0981840-mRNA-1:cds;Parent=Msa0981840-mRNA-1 |
| chr6_4 | three_prime_UTR | 21417552 | 21417669 | 21417552 | ID=Msa0981840-mRNA-1:three_prime_utr;Parent=Msa0981840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
