Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082680 | XP_024639704.1 | 98.097 | 473 | 6 | 1 | 1 | 473 | 1 | 470 | 0.0 | 928 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082680 | sp|Q84W91|C3H32_ARATH | 64.854 | 478 | 148 | 9 | 3 | 473 | 1 | 465 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082680 | A0A1S2XZ87 | 89.873 | 474 | 37 | 4 | 1 | 472 | 1 | 465 | 0.0 | 792 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0082680 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0082680 | -0.801867 | 7.352841e-49 | -8.615850e-47 |
| Msa0007440 | Msa0082680 | -0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa0010490 | Msa0082680 | -0.868668 | 5.503239e-66 | -8.615850e-47 |
| Msa0010500 | Msa0082680 | -0.873323 | 1.607512e-67 | -8.615850e-47 |
| Msa0015460 | Msa0082680 | -0.813305 | 2.737689e-51 | -8.615850e-47 |
| Msa0015480 | Msa0082680 | -0.809871 | 1.527516e-50 | -8.615850e-47 |
| Msa0029260 | Msa0082680 | -0.807236 | 5.577469e-50 | -8.615850e-47 |
| Msa0032580 | Msa0082680 | -0.808387 | 3.175990e-50 | -8.615850e-47 |
| Msa0033880 | Msa0082680 | -0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0037540 | Msa0082680 | 0.904448 | 1.215143e-79 | -8.615850e-47 |
| Msa0037570 | Msa0082680 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
| Msa0037590 | Msa0082680 | 0.906505 | 1.380529e-80 | -8.615850e-47 |
| Msa0056030 | Msa0082680 | -0.815155 | 1.068799e-51 | -8.615850e-47 |
| Msa0065650 | Msa0082680 | -0.829550 | 4.833600e-55 | -8.615850e-47 |
| Msa0068020 | Msa0082680 | -0.809969 | 1.454580e-50 | -8.615850e-47 |
| Msa0076780 | Msa0082680 | -0.813512 | 2.464878e-51 | -8.615850e-47 |
| Msa0082680 | Msa0109590 | -0.827093 | 1.892872e-54 | -8.615850e-47 |
| Msa0082680 | Msa0118540 | -0.837458 | 5.136077e-57 | -8.615850e-47 |
| Msa0082680 | Msa0121590 | -0.803549 | 3.305899e-49 | -8.615850e-47 |
| Msa0082680 | Msa0126840 | -0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0082680 | Msa0126880 | -0.808594 | 2.868434e-50 | -8.615850e-47 |
| Msa0082680 | Msa0129190 | 0.882593 | 9.143540e-71 | -8.615850e-47 |
| Msa0082680 | Msa0138020 | -0.810253 | 1.263790e-50 | -8.615850e-47 |
| Msa0082680 | Msa0140100 | -0.808428 | 3.112771e-50 | -8.615850e-47 |
| Msa0082680 | Msa0142500 | -0.801831 | 7.479728e-49 | -8.615850e-47 |
| Msa0082680 | Msa0146770 | -0.814838 | 1.256146e-51 | -8.615850e-47 |
| Msa0082680 | Msa0155880 | -0.803188 | 3.928016e-49 | -8.615850e-47 |
| Msa0082680 | Msa0165950 | -0.816712 | 4.800801e-52 | -8.615850e-47 |
| Msa0082680 | Msa0169300 | -0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0082680 | Msa0172970 | -0.813060 | 3.097861e-51 | -8.615850e-47 |
| Msa0082680 | Msa0177700 | 0.805598 | 1.235742e-49 | -8.615850e-47 |
| Msa0082680 | Msa0186770 | -0.801832 | 7.475145e-49 | -8.615850e-47 |
| Msa0082680 | Msa0188730 | 0.818821 | 1.604852e-52 | -8.615850e-47 |
| Msa0082680 | Msa0189300 | -0.818868 | 1.565667e-52 | -8.615850e-47 |
| Msa0082680 | Msa0189520 | -0.820120 | 8.111013e-53 | -8.615850e-47 |
| Msa0082680 | Msa0215590 | -0.808755 | 2.649725e-50 | -8.615850e-47 |
| Msa0082680 | Msa0217290 | -0.823815 | 1.130590e-53 | -8.615850e-47 |
| Msa0082680 | Msa0229360 | -0.828002 | 1.144962e-54 | -8.615850e-47 |
| Msa0082680 | Msa0231660 | -0.837059 | 6.496438e-57 | -8.615850e-47 |
| Msa0082680 | Msa0258250 | 0.817218 | 3.696711e-52 | -8.615850e-47 |
| Msa0082680 | Msa0270170 | 0.878612 | 2.438730e-69 | -8.615850e-47 |
| Msa0082680 | Msa0271360 | -0.817752 | 2.802348e-52 | -8.615850e-47 |
| Msa0082680 | Msa0272450 | -0.828273 | 9.852749e-55 | -8.615850e-47 |
| Msa0082680 | Msa0297810 | 0.841235 | 5.372469e-58 | -8.615850e-47 |
| Msa0082680 | Msa0333650 | -0.812114 | 4.988754e-51 | -8.615850e-47 |
| Msa0082680 | Msa0335320 | 0.811568 | 6.561371e-51 | -8.615850e-47 |
| Msa0082680 | Msa0335820 | 0.850227 | 1.946457e-60 | -8.615850e-47 |
| Msa0082680 | Msa0347750 | -0.812535 | 4.037794e-51 | -8.615850e-47 |
| Msa0082680 | Msa0379690 | -0.801364 | 9.324893e-49 | -8.615850e-47 |
| Msa0082680 | Msa0383800 | -0.814763 | 1.305501e-51 | -8.615850e-47 |
| Msa0082680 | Msa0385490 | -0.824540 | 7.637439e-54 | -8.615850e-47 |
| Msa0082680 | Msa0386040 | -0.823996 | 1.025217e-53 | -8.615850e-47 |
| Msa0082680 | Msa0387370 | -0.823532 | 1.316934e-53 | -8.615850e-47 |
| Msa0082680 | Msa0387880 | 0.827253 | 1.732720e-54 | -8.615850e-47 |
| Msa0082680 | Msa0419520 | -0.847615 | 1.034152e-59 | -8.615850e-47 |
| Msa0082680 | Msa0421300 | 0.801918 | 7.178431e-49 | -8.615850e-47 |
| Msa0082680 | Msa0434180 | -0.816066 | 6.697235e-52 | -8.615850e-47 |
| Msa0082680 | Msa0465550 | -0.829103 | 6.207186e-55 | -8.615850e-47 |
| Msa0082680 | Msa0467260 | 0.810120 | 1.349533e-50 | -8.615850e-47 |
| Msa0082680 | Msa0468320 | -0.804342 | 2.261879e-49 | -8.615850e-47 |
| Msa0082680 | Msa0479330 | -0.803323 | 3.682202e-49 | -8.615850e-47 |
| Msa0082680 | Msa0491540 | -0.803779 | 2.961846e-49 | -8.615850e-47 |
| Msa0082680 | Msa0530100 | -0.812623 | 3.862471e-51 | -8.615850e-47 |
| Msa0082680 | Msa0556790 | -0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0082680 | Msa0581280 | -0.812959 | 3.260174e-51 | -8.615850e-47 |
| Msa0082680 | Msa0597000 | -0.814451 | 1.530640e-51 | -8.615850e-47 |
| Msa0082680 | Msa0602370 | -0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa0082680 | Msa0603670 | -0.836565 | 8.684756e-57 | -8.615850e-47 |
| Msa0082680 | Msa0605000 | -0.810919 | 9.072028e-51 | -8.615850e-47 |
| Msa0082680 | Msa0609000 | -0.822742 | 2.013497e-53 | -8.615850e-47 |
| Msa0082680 | Msa0618930 | -0.813529 | 2.443747e-51 | -8.615850e-47 |
| Msa0082680 | Msa0619920 | -0.807605 | 4.657696e-50 | -8.615850e-47 |
| Msa0082680 | Msa0620620 | -0.817449 | 3.278365e-52 | -8.615850e-47 |
| Msa0082680 | Msa0626940 | -0.811284 | 7.560259e-51 | -8.615850e-47 |
| Msa0082680 | Msa0629650 | -0.822365 | 2.463198e-53 | -8.615850e-47 |
| Msa0082680 | Msa0631350 | -0.810848 | 9.397746e-51 | -8.615850e-47 |
| Msa0082680 | Msa0651930 | -0.800365 | 1.491583e-48 | -8.615850e-47 |
| Msa0082680 | Msa0661710 | -0.807666 | 4.522028e-50 | -8.615850e-47 |
| Msa0082680 | Msa0669720 | -0.807990 | 3.858425e-50 | -8.615850e-47 |
| Msa0082680 | Msa0669760 | -0.823514 | 1.329762e-53 | -8.615850e-47 |
| Msa0082680 | Msa0683600 | -0.806269 | 8.928629e-50 | -8.615850e-47 |
| Msa0082680 | Msa0685140 | -0.805640 | 1.210653e-49 | -8.615850e-47 |
| Msa0082680 | Msa0694840 | -0.809447 | 1.884064e-50 | -8.615850e-47 |
| Msa0082680 | Msa0704660 | -0.801068 | 1.072152e-48 | -8.615850e-47 |
| Msa0082680 | Msa0705820 | -0.808909 | 2.456635e-50 | -8.615850e-47 |
| Msa0082680 | Msa0719420 | -0.817444 | 3.287687e-52 | -8.615850e-47 |
| Msa0082680 | Msa0742150 | -0.819640 | 1.044316e-52 | -8.615850e-47 |
| Msa0082680 | Msa0780880 | -0.802880 | 4.546595e-49 | -8.615850e-47 |
| Msa0082680 | Msa0789680 | -0.818727 | 1.685367e-52 | -8.615850e-47 |
| Msa0082680 | Msa0790440 | 0.846933 | 1.590566e-59 | -8.615850e-47 |
| Msa0082680 | Msa0798440 | -0.802330 | 5.906131e-49 | -8.615850e-47 |
| Msa0082680 | Msa0802410 | -0.827133 | 1.851099e-54 | -8.615850e-47 |
| Msa0082680 | Msa0826150 | -0.810338 | 1.211156e-50 | -8.615850e-47 |
| Msa0082680 | Msa0826760 | -0.815011 | 1.150194e-51 | -8.615850e-47 |
| Msa0082680 | Msa0830540 | -0.828613 | 8.155941e-55 | -8.615850e-47 |
| Msa0082680 | Msa0838370 | -0.810168 | 1.317858e-50 | -8.615850e-47 |
| Msa0082680 | Msa0858440 | -0.817497 | 3.197984e-52 | -8.615850e-47 |
| Msa0082680 | Msa0861470 | -0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0082680 | Msa0861570 | -0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0082680 | Msa0865330 | -0.816047 | 6.762869e-52 | -8.615850e-47 |
| Msa0082680 | Msa0865570 | -0.804337 | 2.267352e-49 | -8.615850e-47 |
| Msa0082680 | Msa0877710 | -0.805593 | 1.238754e-49 | -8.615850e-47 |
| Msa0082680 | Msa0880810 | -0.829629 | 4.624941e-55 | -8.615850e-47 |
| Msa0082680 | Msa0895310 | -0.823161 | 1.607692e-53 | -8.615850e-47 |
| Msa0082680 | Msa0901320 | -0.812001 | 5.280828e-51 | -8.615850e-47 |
| Msa0082680 | Msa0925770 | -0.811599 | 6.457949e-51 | -8.615850e-47 |
| Msa0082680 | Msa0935770 | -0.815675 | 8.188165e-52 | -8.615850e-47 |
| Msa0082680 | Msa0945440 | -0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0082680 | Msa0966010 | -0.817606 | 3.023102e-52 | -8.615850e-47 |
| Msa0082680 | Msa0980020 | -0.828111 | 1.078230e-54 | -8.615850e-47 |
| Msa0082680 | Msa0981840 | -0.824048 | 9.967291e-54 | -8.615850e-47 |
| Msa0082680 | Msa0994390 | -0.813594 | 2.365074e-51 | -8.615850e-47 |
| Msa0082680 | Msa1025080 | -0.802178 | 6.346850e-49 | -8.615850e-47 |
| Msa0082680 | Msa1025260 | -0.822010 | 2.977697e-53 | -8.615850e-47 |
| Msa0082680 | Msa1025940 | -0.803490 | 3.400566e-49 | -8.615850e-47 |
| Msa0082680 | Msa1029970 | -0.837127 | 6.243291e-57 | -8.615850e-47 |
| Msa0082680 | Msa1040800 | -0.815875 | 7.388260e-52 | -8.615850e-47 |
| Msa0082680 | Msa1059470 | -0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0082680 | Msa1063690 | -0.814823 | 1.265749e-51 | -8.615850e-47 |
| Msa0082680 | Msa1064250 | -0.816262 | 6.056026e-52 | -8.615850e-47 |
| Msa0082680 | Msa1070390 | -0.820017 | 8.563596e-53 | -8.615850e-47 |
| Msa0082680 | Msa1071320 | -0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0082680 | Msa1081790 | 0.816144 | 6.432336e-52 | -8.615850e-47 |
| Msa0082680 | Msa1089320 | -0.814296 | 1.656432e-51 | -8.615850e-47 |
| Msa0082680 | Msa1096070 | -0.820821 | 5.601749e-53 | -8.615850e-47 |
| Msa0082680 | Msa1103660 | 0.840544 | 8.157659e-58 | -8.615850e-47 |
| Msa0082680 | Msa1108820 | -0.801542 | 8.573656e-49 | -8.615850e-47 |
| Msa0082680 | Msa1109090 | -0.801858 | 7.382243e-49 | -8.615850e-47 |
| Msa0082680 | Msa1109350 | -0.814162 | 1.772796e-51 | -8.615850e-47 |
| Msa0082680 | Msa1120810 | -0.824136 | 9.506108e-54 | -8.615850e-47 |
| Msa0082680 | Msa1122820 | -0.814269 | 1.678869e-51 | -8.615850e-47 |
| Msa0082680 | Msa1126850 | -0.826370 | 2.816324e-54 | -8.615850e-47 |
| Msa0082680 | Msa1127190 | -0.825437 | 4.690682e-54 | -8.615850e-47 |
| Msa0082680 | Msa1131170 | -0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa0082680 | Msa1133230 | -0.824225 | 9.057307e-54 | -8.615850e-47 |
| Msa0082680 | Msa1133250 | -0.827977 | 1.161057e-54 | -8.615850e-47 |
| Msa0082680 | Msa1135800 | 0.822209 | 2.677604e-53 | -8.615850e-47 |
| Msa0082680 | Msa1135810 | 0.815726 | 7.974064e-52 | -8.615850e-47 |
| Msa0082680 | Msa1138870 | -0.800282 | 1.550844e-48 | -8.615850e-47 |
| Msa0082680 | Msa1140230 | -0.806310 | 8.754734e-50 | -8.615850e-47 |
| Msa0082680 | Msa1152920 | -0.820478 | 6.715451e-53 | -8.615850e-47 |
| Msa0082680 | Msa1163540 | -0.801960 | 7.034462e-49 | -8.615850e-47 |
| Msa0082680 | Msa1166090 | 0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa0082680 | Msa1166870 | -0.803065 | 4.164767e-49 | -8.615850e-47 |
| Msa0082680 | Msa1176710 | -0.810527 | 1.102812e-50 | -8.615850e-47 |
| Msa0082680 | Msa1176720 | -0.802827 | 4.662786e-49 | -8.615850e-47 |
| Msa0082680 | Msa1176980 | -0.820235 | 7.634201e-53 | -8.615850e-47 |
| Msa0082680 | Msa1180500 | -0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0082680 | Msa1197320 | -0.800129 | 1.665790e-48 | -8.615850e-47 |
| Msa0082680 | Msa1206310 | -0.819653 | 1.037300e-52 | -8.615850e-47 |
| Msa0082680 | Msa1206360 | -0.827863 | 1.236667e-54 | -8.615850e-47 |
| Msa0082680 | Msa1207310 | -0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0082680 | Msa1209200 | -0.810320 | 1.222009e-50 | -8.615850e-47 |
| Msa0082680 | Msa1218500 | -0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0082680 | Msa1218580 | -0.827599 | 1.431279e-54 | -8.615850e-47 |
| Msa0082680 | Msa1231840 | -0.835652 | 1.481178e-56 | -8.615850e-47 |
| Msa0082680 | Msa1274560 | -0.803910 | 2.781965e-49 | -8.615850e-47 |
| Msa0082680 | Msa1293590 | -0.814348 | 1.612442e-51 | -8.615850e-47 |
| Msa0082680 | Msa1306560 | -0.810787 | 9.690053e-51 | -8.615850e-47 |
| Msa0082680 | Msa1307180 | -0.829009 | 6.543143e-55 | -8.615850e-47 |
| Msa0082680 | Msa1312520 | -0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0082680 | Msa1316360 | -0.835393 | 1.722765e-56 | -8.615850e-47 |
| Msa0082680 | Msa1331350 | -0.814115 | 1.815287e-51 | -8.615850e-47 |
| Msa0082680 | Msa1331710 | -0.802679 | 5.003621e-49 | -8.615850e-47 |
| Msa0082680 | Msa1355700 | -0.803023 | 4.247460e-49 | -8.615850e-47 |
| Msa0082680 | Msa1355890 | -0.843943 | 1.026601e-58 | -8.615850e-47 |
| Msa0082680 | Msa1364210 | -0.815632 | 8.370013e-52 | -8.615850e-47 |
| Msa0082680 | Msa1371090 | -0.801387 | 9.221353e-49 | -8.615850e-47 |
| Msa0082680 | Msa1382790 | -0.809622 | 1.727830e-50 | -8.615850e-47 |
| Msa0082680 | Msa1386050 | -0.826443 | 2.705260e-54 | -8.615850e-47 |
| Msa0082680 | Msa1388860 | -0.831723 | 1.420299e-55 | -8.615850e-47 |
| Msa0082680 | Msa1396400 | 0.813764 | 2.169787e-51 | -8.615850e-47 |
| Msa0082680 | Msa1403530 | 0.864407 | 1.243473e-64 | -8.615850e-47 |
| Msa0082680 | Msa1407190 | -0.815044 | 1.130959e-51 | -8.615850e-47 |
| Msa0082680 | Msa1418280 | -0.808852 | 2.526182e-50 | -8.615850e-47 |
| Msa0082680 | Msa1432130 | -0.800536 | 1.376423e-48 | -8.615850e-47 |
| Msa0082680 | Msa1436520 | -0.845115 | 4.967751e-59 | -8.615850e-47 |
| Msa0082680 | Msa1436600 | -0.832316 | 1.013306e-55 | -8.615850e-47 |
| Msa0082680 | Msa1450550 | 0.864597 | 1.084402e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082680 | MtrunA17_Chr1g0195891 | 98.555 | 346 | 2 | 1 | 1 | 346 | 1 | 343 | 0.0 | 689 |
| Msa0082680 | MtrunA17_Chr1g0195891 | 53.947 | 76 | 33 | 1 | 298 | 371 | 91 | 166 | 3.42e-21 | 94.7 |
| Msa0082680 | MtrunA17_Chr4g0066941 | 52.456 | 509 | 174 | 12 | 4 | 460 | 5 | 497 | 2.01e-143 | 421 |
| Msa0082680 | MtrunA17_Chr2g0286151 | 51.496 | 468 | 191 | 13 | 1 | 445 | 1 | 455 | 8.97e-130 | 384 |
| Msa0082680 | MtrunA17_Chr7g0249221 | 48.626 | 364 | 172 | 7 | 33 | 387 | 9 | 366 | 1.85e-109 | 330 |
| Msa0082680 | MtrunA17_Chr5g0438891 | 36.923 | 390 | 209 | 10 | 49 | 434 | 36 | 392 | 2.42e-76 | 245 |
| Msa0082680 | MtrunA17_Chr5g0438891 | 44.186 | 86 | 46 | 2 | 39 | 123 | 251 | 335 | 1.34e-15 | 78.6 |
| Msa0082680 | MtrunA17_Chr5g0438891 | 38.614 | 101 | 50 | 2 | 294 | 389 | 32 | 125 | 3.13e-15 | 77.4 |
| Msa0082680 | MtrunA17_Chr4g0058011 | 36.207 | 348 | 168 | 13 | 45 | 375 | 227 | 537 | 5.49e-61 | 209 |
| Msa0082680 | MtrunA17_Chr4g0058011 | 50.538 | 93 | 43 | 1 | 94 | 186 | 458 | 547 | 1.57e-21 | 97.8 |
| Msa0082680 | MtrunA17_Chr3g0116431 | 34.985 | 343 | 177 | 9 | 43 | 371 | 165 | 475 | 5.31e-59 | 202 |
| Msa0082680 | MtrunA17_Chr3g0116431 | 47.368 | 114 | 54 | 3 | 93 | 205 | 399 | 507 | 1.88e-20 | 94.0 |
| Msa0082680 | MtrunA17_Chr3g0116431 | 35.000 | 100 | 58 | 2 | 298 | 394 | 171 | 266 | 9.01e-13 | 70.5 |
| Msa0082680 | MtrunA17_Chr8g0356241 | 33.803 | 355 | 197 | 9 | 43 | 371 | 132 | 474 | 1.06e-55 | 193 |
| Msa0082680 | MtrunA17_Chr8g0356241 | 36.025 | 161 | 56 | 3 | 57 | 171 | 317 | 476 | 2.11e-23 | 103 |
| Msa0082680 | MtrunA17_Chr1g0195901 | 96.970 | 99 | 3 | 0 | 375 | 473 | 1 | 99 | 1.11e-55 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082680 | AT2G47850.1 | 64.854 | 478 | 148 | 9 | 3 | 473 | 1 | 465 | 0.0 | 573 |
| Msa0082680 | AT2G47850.3 | 64.854 | 478 | 148 | 9 | 3 | 473 | 1 | 465 | 0.0 | 573 |
| Msa0082680 | AT2G47850.2 | 60.042 | 478 | 145 | 10 | 3 | 473 | 1 | 439 | 1.07e-177 | 505 |
| Msa0082680 | AT2G47850.4 | 63.818 | 351 | 112 | 7 | 130 | 473 | 1 | 343 | 3.33e-136 | 396 |
| Msa0082680 | AT2G47850.4 | 53.571 | 84 | 39 | 0 | 87 | 170 | 157 | 240 | 1.53e-23 | 102 |
| Msa0082680 | AT2G47850.4 | 41.414 | 99 | 51 | 2 | 47 | 138 | 162 | 260 | 2.21e-16 | 80.9 |
| Msa0082680 | AT5G18550.1 | 49.251 | 467 | 198 | 15 | 19 | 466 | 18 | 464 | 1.84e-125 | 373 |
| Msa0082680 | AT5G18550.4 | 52.506 | 419 | 162 | 13 | 19 | 418 | 18 | 418 | 3.32e-125 | 372 |
| Msa0082680 | AT5G18550.3 | 49.087 | 438 | 186 | 12 | 47 | 466 | 14 | 432 | 3.21e-123 | 366 |
| Msa0082680 | AT3G06410.1 | 52.427 | 412 | 169 | 11 | 1 | 394 | 1 | 403 | 7.43e-119 | 356 |
| Msa0082680 | AT5G18550.2 | 47.845 | 464 | 196 | 15 | 19 | 466 | 18 | 451 | 1.55e-118 | 355 |
| Msa0082680 | AT3G02830.1 | 46.429 | 364 | 166 | 7 | 33 | 387 | 19 | 362 | 2.72e-103 | 314 |
| Msa0082680 | AT3G02830.2 | 46.685 | 362 | 164 | 7 | 35 | 387 | 1 | 342 | 1.02e-102 | 312 |
| Msa0082680 | AT5G16540.1 | 43.003 | 393 | 155 | 13 | 33 | 411 | 20 | 357 | 1.49e-90 | 280 |
| Msa0082680 | AT5G16540.1 | 37.107 | 159 | 78 | 6 | 298 | 447 | 84 | 229 | 2.74e-20 | 92.8 |
| Msa0082680 | AT5G16540.3 | 43.223 | 391 | 153 | 13 | 35 | 411 | 1 | 336 | 2.80e-90 | 279 |
| Msa0082680 | AT5G16540.3 | 37.107 | 159 | 78 | 6 | 298 | 447 | 63 | 208 | 2.09e-20 | 92.8 |
| Msa0082680 | AT5G16540.2 | 41.432 | 391 | 157 | 13 | 33 | 411 | 20 | 350 | 1.97e-84 | 265 |
| Msa0082680 | AT5G16540.2 | 37.107 | 159 | 78 | 6 | 298 | 447 | 84 | 229 | 1.94e-20 | 93.2 |
| Msa0082680 | AT5G16540.4 | 43.614 | 321 | 120 | 11 | 35 | 346 | 1 | 269 | 3.18e-75 | 237 |
| Msa0082680 | AT5G16540.4 | 37.107 | 159 | 78 | 6 | 298 | 447 | 63 | 208 | 1.01e-20 | 92.4 |
| Msa0082680 | AT5G16540.4 | 43.878 | 98 | 50 | 2 | 298 | 394 | 18 | 111 | 5.85e-17 | 81.3 |
| Msa0082680 | AT1G04990.1 | 37.135 | 342 | 155 | 9 | 45 | 371 | 37 | 333 | 2.35e-63 | 211 |
| Msa0082680 | AT1G04990.6 | 37.135 | 342 | 155 | 9 | 45 | 371 | 37 | 333 | 2.35e-63 | 211 |
| Msa0082680 | AT1G04990.2 | 37.135 | 342 | 155 | 9 | 45 | 371 | 37 | 333 | 2.35e-63 | 211 |
| Msa0082680 | AT3G48440.1 | 35.511 | 352 | 192 | 9 | 49 | 388 | 107 | 435 | 5.36e-62 | 209 |
| Msa0082680 | AT3G48440.1 | 33.858 | 127 | 34 | 2 | 295 | 371 | 104 | 230 | 2.92e-15 | 78.2 |
| Msa0082680 | AT3G48440.1 | 39.241 | 79 | 45 | 2 | 46 | 122 | 340 | 417 | 3.56e-11 | 65.5 |
| Msa0082680 | AT2G32930.2 | 36.338 | 355 | 179 | 11 | 49 | 393 | 41 | 358 | 2.99e-58 | 199 |
| Msa0082680 | AT2G32930.3 | 36.338 | 355 | 179 | 11 | 49 | 393 | 14 | 331 | 3.38e-58 | 198 |
| Msa0082680 | AT1G04990.5 | 35.294 | 340 | 144 | 9 | 45 | 371 | 37 | 313 | 7.27e-56 | 191 |
| Msa0082680 | AT1G04990.5 | 38.043 | 92 | 56 | 1 | 298 | 389 | 44 | 134 | 6.66e-14 | 73.6 |
| Msa0082680 | AT5G63260.1 | 35.429 | 350 | 189 | 11 | 49 | 387 | 98 | 421 | 6.08e-54 | 187 |
| Msa0082680 | AT5G63260.1 | 42.718 | 103 | 54 | 1 | 90 | 192 | 327 | 424 | 2.01e-18 | 87.8 |
| Msa0082680 | AT5G63260.1 | 32.394 | 142 | 41 | 3 | 297 | 389 | 97 | 232 | 3.39e-15 | 77.8 |
| Msa0082680 | AT5G63260.1 | 38.462 | 78 | 47 | 1 | 46 | 122 | 328 | 405 | 3.41e-12 | 68.6 |
| Msa0082680 | AT2G32930.1 | 35.854 | 357 | 174 | 13 | 49 | 393 | 41 | 354 | 2.06e-53 | 186 |
| Msa0082680 | AT3G12680.1 | 34.012 | 344 | 191 | 8 | 49 | 371 | 171 | 499 | 1.02e-51 | 183 |
| Msa0082680 | AT3G12680.1 | 41.860 | 172 | 71 | 4 | 47 | 192 | 220 | 388 | 6.49e-34 | 134 |
| Msa0082680 | AT3G12680.1 | 39.024 | 164 | 58 | 4 | 50 | 171 | 338 | 501 | 6.31e-27 | 114 |
| Msa0082680 | AT3G12680.1 | 41.346 | 104 | 51 | 2 | 28 | 123 | 398 | 499 | 2.18e-17 | 85.1 |
| Msa0082680 | AT3G12680.1 | 42.169 | 83 | 39 | 2 | 297 | 371 | 170 | 251 | 3.57e-13 | 72.0 |
| Msa0082680 | AT5G63260.2 | 33.880 | 366 | 189 | 11 | 49 | 387 | 98 | 437 | 1.45e-51 | 181 |
| Msa0082680 | AT5G63260.2 | 42.718 | 103 | 54 | 1 | 90 | 192 | 343 | 440 | 1.99e-18 | 87.8 |
| Msa0082680 | AT5G63260.2 | 45.652 | 92 | 42 | 2 | 300 | 389 | 163 | 248 | 8.73e-18 | 85.9 |
| Msa0082680 | AT5G63260.2 | 38.462 | 78 | 47 | 1 | 46 | 122 | 344 | 421 | 3.88e-12 | 68.6 |
| Msa0082680 | AT1G04990.3 | 35.714 | 280 | 125 | 7 | 104 | 371 | 16 | 252 | 3.41e-44 | 158 |
| Msa0082680 | AT1G04990.3 | 48.571 | 70 | 36 | 0 | 60 | 129 | 17 | 86 | 7.31e-18 | 84.7 |
| Msa0082680 | AT1G04990.3 | 38.017 | 121 | 61 | 4 | 82 | 191 | 165 | 282 | 1.11e-13 | 72.4 |
| Msa0082680 | AT1G04990.4 | 33.453 | 278 | 114 | 7 | 104 | 371 | 16 | 232 | 8.01e-37 | 137 |
| Msa0082680 | AT1G04990.4 | 48.571 | 70 | 36 | 0 | 60 | 129 | 17 | 86 | 9.87e-18 | 84.3 |
| Msa0082680 | AT1G48195.1 | 51.250 | 80 | 37 | 1 | 293 | 370 | 1 | 80 | 3.56e-20 | 85.1 |
| Msa0082680 | AT1G48195.1 | 52.000 | 75 | 36 | 0 | 94 | 168 | 6 | 80 | 1.33e-18 | 80.9 |
Find 194 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGTTGTTCCATTTCC+TGG | 0.149575 | 1_2:+61516675 | Msa0082680:CDS |
| ACCGGTTCACCGGGTCTTTC+AGG | 0.153591 | 1_2:-61516994 | None:intergenic |
| AAAACTGGAACCTGTAAATT+TGG | 0.163743 | 1_2:+61516215 | Msa0082680:CDS |
| AAAACGGGGCAGTGCAAATT+TGG | 0.196691 | 1_2:+61516447 | Msa0082680:CDS |
| AGAACTGGGGACTGTAAATT+TGG | 0.217131 | 1_2:+61517033 | Msa0082680:CDS |
| CAAGCTCCACTAAATATTTA+TGG | 0.224349 | 1_2:+61516287 | Msa0082680:CDS |
| CGAGAGAGACAGAAAGAAAA+TGG | 0.228655 | 1_2:-61515098 | None:intergenic |
| CTTCAACATCTTCAGAATTT+CGG | 0.252360 | 1_2:+61519391 | Msa0082680:CDS |
| ATGCTCCTCTCAGTATTTAA+TGG | 0.254508 | 1_2:+61519671 | Msa0082680:three_prime_UTR |
| CAAAATGGGCACTGCAAGTT+TGG | 0.265662 | 1_2:+61519249 | Msa0082680:CDS |
| CTGGCGCGCAACCTGCTGTT+GGG | 0.306993 | 1_2:+61516851 | Msa0082680:CDS |
| ACAAGACGCGCCAAATTTAC+AGG | 0.307599 | 1_2:-61516225 | None:intergenic |
| CTTCATACTATTATGCTTTG+TGG | 0.327068 | 1_2:+61519831 | Msa0082680:three_prime_UTR |
| GAAGAGGGCAGAGGAGTATA+AGG | 0.330274 | 1_2:-61516931 | None:intergenic |
| TCCTGAAGTGTGTTTCCTCC+AGG | 0.341736 | 1_2:-61516961 | None:intergenic |
| GGAGATAACACAGGGCTTAC+AGG | 0.346214 | 1_2:-61516829 | None:intergenic |
| TCCTGGATGGAGTCCTTATT+CGG | 0.346285 | 1_2:+61516692 | Msa0082680:CDS |
| CTGCCCTCTTCTCCTGGCCC+TGG | 0.347929 | 1_2:+61516943 | Msa0082680:CDS |
| GTTGGGGCTACTTCTCTTTA+CGG | 0.355067 | 1_2:+61516868 | Msa0082680:CDS |
| TGCTCCTATTATTTGAAAAC+GGG | 0.359605 | 1_2:+61516432 | Msa0082680:CDS |
| CATTCATCTGGAAATGGTTC+TGG | 0.366848 | 1_2:+61519456 | Msa0082680:CDS |
| TCATATGTACAAGGGGCTTA+TGG | 0.368244 | 1_2:+61516636 | Msa0082680:CDS |
| CCAACAGCAGGTTGCGCGCC+AGG | 0.368459 | 1_2:-61516850 | None:intergenic |
| AAAGAGAGTTAGCGATTTAG+AGG | 0.369711 | 1_2:+61519919 | Msa0082680:three_prime_UTR |
| CGACCACTTCTTAGTCCCTT+TGG | 0.371098 | 1_2:+61517099 | Msa0082680:CDS |
| TATGTGTCTCTTACCGAATA+AGG | 0.372520 | 1_2:-61516705 | None:intergenic |
| TAGAATGATCTAGAATGTTC+TGG | 0.372795 | 1_2:-61515169 | None:intergenic |
| TGCCAATACTATATGAGAAC+TGG | 0.381157 | 1_2:+61517018 | Msa0082680:CDS |
| TAAGATGATTATGTTTAGAC+AGG | 0.383054 | 1_2:+61519868 | Msa0082680:three_prime_UTR |
| GCTGCTGATGCTACTGCTCT+TGG | 0.385955 | 1_2:+61515336 | Msa0082680:CDS |
| CATTCTGGCTGAAAAGGAAT+TGG | 0.388564 | 1_2:-61519433 | None:intergenic |
| ACTCCTCTGCCCTCTTCTCC+TGG | 0.392892 | 1_2:+61516937 | Msa0082680:CDS |
| CTCGACTCGACGAGGAAGTT+AGG | 0.394395 | 1_2:+61515117 | Msa0082680:five_prime_UTR |
| GGAGGTTCGCCAAGCCTCTC+CGG | 0.397154 | 1_2:-61516068 | None:intergenic |
| AGAGTCGAACCGGTCGTAAT+GGG | 0.398417 | 1_2:-61516313 | None:intergenic |
| TGTGCTTATTATATGAGAAC+CGG | 0.398738 | 1_2:+61515543 | Msa0082680:CDS |
| TGCAGTGCAAAACTGACATT+CGG | 0.398789 | 1_2:-61519944 | None:intergenic |
| CCTGGCGCGCAACCTGCTGT+TGG | 0.402151 | 1_2:+61516850 | Msa0082680:CDS |
| AAGAGTCGAACCGGTCGTAA+TGG | 0.402365 | 1_2:-61516314 | None:intergenic |
| TCAGCCAGAATGCATTCATC+TGG | 0.404570 | 1_2:+61519444 | Msa0082680:CDS |
| AGCCCCTTGTACATATGAAC+CGG | 0.406272 | 1_2:-61516631 | None:intergenic |
| TAAGGACTCCATCCAGGAAA+TGG | 0.406810 | 1_2:-61516687 | None:intergenic |
| TTGGACCCTGACTTCAGTTC+AGG | 0.406845 | 1_2:-61519414 | None:intergenic |
| TGAATGCATTCTGGCTGAAA+AGG | 0.407290 | 1_2:-61519439 | None:intergenic |
| GGTGGGTCTGTCTCACTGTC+TGG | 0.408100 | 1_2:+61519507 | Msa0082680:CDS |
| CATTTATCACTTGGTGGTGG+TGG | 0.408114 | 1_2:+61515480 | Msa0082680:CDS |
| GTGCTCCTATTATTTGAAAA+CGG | 0.410929 | 1_2:+61516431 | Msa0082680:CDS |
| GTGTTTACGAGAAAGGAAAA+TGG | 0.411487 | 1_2:-61515208 | None:intergenic |
| CATAAATATTTAGTGGAGCT+TGG | 0.417854 | 1_2:-61516286 | None:intergenic |
| CTGTACAGTGTTTACGAGAA+AGG | 0.418611 | 1_2:-61515215 | None:intergenic |
| CCTCCTCTGCCGGAACAGTT+TGG | 0.418933 | 1_2:+61516564 | Msa0082680:CDS |
| TCCTGAAAGACCCGGTGAAC+CGG | 0.419994 | 1_2:+61516993 | Msa0082680:CDS |
| TTCGGTACACCATGTCTCTC+CGG | 0.421325 | 1_2:-61515519 | None:intergenic |
| CCAACTGGGTATGGAGCAAC+TGG | 0.428649 | 1_2:-61519345 | None:intergenic |
| TATGCTTTGTGGACTTATGC+TGG | 0.433115 | 1_2:+61519842 | Msa0082680:three_prime_UTR |
| GGTCCCGTGCTTCTTTCCCC+AGG | 0.436024 | 1_2:+61516657 | Msa0082680:CDS |
| CCCTGGAGGAAACACACTTC+AGG | 0.438306 | 1_2:+61516960 | Msa0082680:CDS |
| ATTTCCAGATGAATGCATTC+TGG | 0.440875 | 1_2:-61519448 | None:intergenic |
| GCTGCTGCAGTAAGAGCTAC+AGG | 0.442302 | 1_2:+61516038 | Msa0082680:CDS |
| CAGTTGCTCCATACCCAGTT+GGG | 0.446844 | 1_2:+61519346 | Msa0082680:CDS |
| AATGGTTCTGGTACCTCTGT+TGG | 0.448422 | 1_2:+61519468 | Msa0082680:CDS |
| TTTCGGCCTGAACTGAAGTC+AGG | 0.458185 | 1_2:+61519408 | Msa0082680:CDS |
| CTCATATAATAAGCACAATT+CGG | 0.458439 | 1_2:-61515537 | None:intergenic |
| CCTGAAGTGTGTTTCCTCCA+GGG | 0.458829 | 1_2:-61516960 | None:intergenic |
| AGTAAAGACCCAACTGGGTA+TGG | 0.465151 | 1_2:-61519354 | None:intergenic |
| GGGTTGTTCCATTTCCTGGA+TGG | 0.465512 | 1_2:+61516679 | Msa0082680:CDS |
| TTATCACTTGGTGGTGGTGG+TGG | 0.467660 | 1_2:+61515483 | Msa0082680:CDS |
| GAAGCTCCTCCAAACTGTTC+CGG | 0.468963 | 1_2:-61516573 | None:intergenic |
| GAGAGAGACAGAAAGAAAAT+GGG | 0.469232 | 1_2:-61515097 | None:intergenic |
| CTCATATAGTATTGGCAGAC+CGG | 0.470230 | 1_2:-61517012 | None:intergenic |
| CTTTGGTCTTCCTCTACGCC+CGG | 0.470273 | 1_2:+61517116 | Msa0082680:CDS |
| GTCCCGTGCTTCTTTCCCCA+GGG | 0.477072 | 1_2:+61516658 | Msa0082680:CDS |
| CCAGTTGCTCCATACCCAGT+TGG | 0.481757 | 1_2:+61519345 | Msa0082680:CDS |
| AGAATGCATTCATCTGGAAA+TGG | 0.482468 | 1_2:+61519450 | Msa0082680:CDS |
| TCCTCCAGGGCCAGGAGAAG+AGG | 0.485909 | 1_2:-61516947 | None:intergenic |
| CTTTCTCGTAAACACTGTAC+AGG | 0.487912 | 1_2:+61515216 | Msa0082680:five_prime_UTR |
| CCAGGAAATGGAACAACCCC+TGG | 0.488180 | 1_2:-61516675 | None:intergenic |
| GCTTGGCGAACCTCCATGTC+AGG | 0.489422 | 1_2:+61516076 | Msa0082680:CDS |
| CCCCAGTTCTCATATAGTAT+TGG | 0.489917 | 1_2:-61517020 | None:intergenic |
| CTGAAGATGTTGAAGGAACC+AGG | 0.490486 | 1_2:-61519383 | None:intergenic |
| GTAAGCCCTGTGTTATCTCC+TGG | 0.490761 | 1_2:+61516832 | Msa0082680:CDS |
| CCCTCTTCTCCTGGCCCTGG+AGG | 0.494580 | 1_2:+61516946 | Msa0082680:CDS |
| GGGTATCCATAAATATTTAG+TGG | 0.496866 | 1_2:-61516293 | None:intergenic |
| TTAGATAGTAAAGACCCAAC+TGG | 0.497066 | 1_2:-61519360 | None:intergenic |
| ACCCCTGGGGAAAGAAGCAC+GGG | 0.497178 | 1_2:-61516660 | None:intergenic |
| CGCCATTCATGTTGATTAAG+CGG | 0.499950 | 1_2:-61515306 | None:intergenic |
| GGTCGGAGCCCCACTAGAAA+CGG | 0.501024 | 1_2:+61515276 | Msa0082680:CDS |
| GCAGTGCAAAACTGACATTC+GGG | 0.502440 | 1_2:-61519943 | None:intergenic |
| CCTCTGCCGGAACAGTTTGG+AGG | 0.503926 | 1_2:+61516567 | Msa0082680:CDS |
| TGCAAGTTTGATCATCCTGC+GGG | 0.504011 | 1_2:+61519279 | Msa0082680:CDS |
| CCTCCAAACTGTTCCGGCAG+AGG | 0.504937 | 1_2:-61516567 | None:intergenic |
| TGGGTCTTTACTATCTAACC+TGG | 0.505387 | 1_2:+61519365 | Msa0082680:CDS |
| GGGGACTACCCGGAGAGGCT+TGG | 0.507506 | 1_2:+61516059 | Msa0082680:CDS |
| CGGGTTGGATCCGTTTCTAG+TGG | 0.508512 | 1_2:-61515286 | None:intergenic |
| GCCATTCATGTTGATTAAGC+GGG | 0.509081 | 1_2:-61515305 | None:intergenic |
| GGGTTGGATCCGTTTCTAGT+GGG | 0.515461 | 1_2:-61515285 | None:intergenic |
| AGTGTGTTTCCTCCAGGGCC+AGG | 0.516627 | 1_2:-61516955 | None:intergenic |
| TTCATGTTGATTAAGCGGGT+TGG | 0.518663 | 1_2:-61515301 | None:intergenic |
| TCTTTACCTTTGTACAGAGC+AGG | 0.520007 | 1_2:-61519901 | None:intergenic |
| CAGAGTTCTGCTTCTTTGAA+CGG | 0.524210 | 1_2:+61519546 | Msa0082680:CDS |
| CGAAATTCTGAAGATGTTGA+AGG | 0.524251 | 1_2:-61519390 | None:intergenic |
| ACCGAATAAGGACTCCATCC+AGG | 0.527011 | 1_2:-61516693 | None:intergenic |
| CCTCCAGGGCCAGGAGAAGA+GGG | 0.528497 | 1_2:-61516946 | None:intergenic |
| GGGCCAGGAGAAGAGGGCAG+AGG | 0.530606 | 1_2:-61516940 | None:intergenic |
| GCTGATGCTACTGCTCTTGG+AGG | 0.530886 | 1_2:+61515339 | Msa0082680:CDS |
| GTATTGGCAGACCGGTTCAC+CGG | 0.534770 | 1_2:-61517004 | None:intergenic |
| GATCACGCGGGTGATTGAAA+CGG | 0.536117 | 1_2:-61515590 | None:intergenic |
| CTCTCTCTCTGGAAACTGTA+CGG | 0.536785 | 1_2:-61514980 | None:intergenic |
| GAGGTTCGCCAAGCCTCTCC+GGG | 0.539007 | 1_2:-61516067 | None:intergenic |
| TCCAACGGTTCCTCCTCTGC+CGG | 0.542744 | 1_2:+61516554 | Msa0082680:CDS |
| TTCCACCATCCTCAACCTGC+TGG | 0.542831 | 1_2:+61516483 | Msa0082680:CDS |
| AGAGAAGTAGCCCCAACAGC+AGG | 0.544267 | 1_2:-61516862 | None:intergenic |
| ATATCATCATCCACGGGACC+AGG | 0.545094 | 1_2:+61517068 | Msa0082680:CDS |
| ATGTGGCATTTATCACTTGG+TGG | 0.548863 | 1_2:+61515474 | Msa0082680:CDS |
| TCGGTACACCATGTCTCTCC+GGG | 0.549964 | 1_2:-61515518 | None:intergenic |
| TCCGGCAGAGGAGGAACCGT+TGG | 0.550152 | 1_2:-61516555 | None:intergenic |
| AATGAAGTGCCAGCAGGTTG+AGG | 0.551017 | 1_2:-61516492 | None:intergenic |
| TATTGGCAGACCGGTTCACC+GGG | 0.551065 | 1_2:-61517003 | None:intergenic |
| CCGTGGATGATGATATCGAC+AGG | 0.551295 | 1_2:-61517061 | None:intergenic |
| CGTTCAAAGAAGCAGAACTC+TGG | 0.551424 | 1_2:-61519545 | None:intergenic |
| AGAGCAGTAGCATCAGCAGC+AGG | 0.552367 | 1_2:-61515333 | None:intergenic |
| ACCCGCTTAATCAACATGAA+TGG | 0.553551 | 1_2:+61515304 | Msa0082680:CDS |
| CACACGAACGAGAGAACACA+AGG | 0.555271 | 1_2:+61515056 | Msa0082680:five_prime_UTR |
| TGCCAGCAGGTTGAGGATGG+TGG | 0.556077 | 1_2:-61516485 | None:intergenic |
| TCGATGTGGCATTTATCACT+TGG | 0.559752 | 1_2:+61515471 | Msa0082680:CDS |
| CCAAACTGTTCCGGCAGAGG+AGG | 0.560230 | 1_2:-61516564 | None:intergenic |
| GCCAATACTATATGAGAACT+GGG | 0.562063 | 1_2:+61517019 | Msa0082680:CDS |
| AGCACACAAGAATCACGATT+GGG | 0.562359 | 1_2:-61519735 | None:intergenic |
| GGGCGTAGAGGAAGACCAAA+GGG | 0.563721 | 1_2:-61517114 | None:intergenic |
| TAAAATTGAGGTGCAGATGC+TGG | 0.564467 | 1_2:-61516516 | None:intergenic |
| AACCCCTGGGGAAAGAAGCA+CGG | 0.566411 | 1_2:-61516661 | None:intergenic |
| TGGCGCGCAACCTGCTGTTG+GGG | 0.568122 | 1_2:+61516852 | Msa0082680:CDS |
| GAAGTGGTCGTGCAGCAACC+TGG | 0.569368 | 1_2:-61517086 | None:intergenic |
| GCTAGACCTCCTGTGTTACC+CGG | 0.569379 | 1_2:+61516612 | Msa0082680:CDS |
| TCTAGAATGTTCTGGAAGAT+CGG | 0.571009 | 1_2:-61515161 | None:intergenic |
| CAGGAAATGGAACAACCCCT+GGG | 0.572341 | 1_2:-61516674 | None:intergenic |
| CTGTCTCTCTCGACTCGACG+AGG | 0.573937 | 1_2:+61515109 | Msa0082680:five_prime_UTR |
| AGCTTCTGCAAGTGTGAGAG+TGG | 0.577326 | 1_2:+61516590 | Msa0082680:CDS |
| TTTCTTCCTGCTCTGTACAA+AGG | 0.580033 | 1_2:+61519895 | Msa0082680:three_prime_UTR |
| TGGCATTTATCACTTGGTGG+TGG | 0.580267 | 1_2:+61515477 | Msa0082680:CDS |
| TCAACAGGTGCAGTCTCCAA+CGG | 0.580807 | 1_2:+61516539 | Msa0082680:CDS |
| CGTGCAGCAACCTGGTCCCG+TGG | 0.581143 | 1_2:-61517078 | None:intergenic |
| CTGTATCTCATTGACCCCGC+AGG | 0.585745 | 1_2:-61519294 | None:intergenic |
| GTGCTTATTATATGAGAACC+GGG | 0.587111 | 1_2:+61515544 | Msa0082680:CDS |
| TAGCACACAAGAATCACGAT+TGG | 0.588728 | 1_2:-61519736 | None:intergenic |
| TTCGGCCTGAACTGAAGTCA+GGG | 0.588933 | 1_2:+61519409 | Msa0082680:CDS |
| TCAATAAGAGAAGATGCTGA+TGG | 0.590082 | 1_2:-61519318 | None:intergenic |
| GGTTGGATCCGTTTCTAGTG+GGG | 0.592076 | 1_2:-61515284 | None:intergenic |
| AAACAAAATTATACCTGACA+TGG | 0.597128 | 1_2:-61516089 | None:intergenic |
| TTACCCGGTTCATATGTACA+AGG | 0.598382 | 1_2:+61516627 | Msa0082680:CDS |
| ACCATTCATACCGGGCGTAG+AGG | 0.599219 | 1_2:-61517126 | None:intergenic |
| TTATGGATACCCATTACGAC+CGG | 0.600721 | 1_2:+61516304 | Msa0082680:CDS |
| AAGAGCTACAGGGGACTACC+CGG | 0.601311 | 1_2:+61516049 | Msa0082680:CDS |
| CTGCTGCAGTAAGAGCTACA+GGG | 0.603414 | 1_2:+61516039 | Msa0082680:CDS |
| GAATCTTACCCGGAGAGACA+TGG | 0.604072 | 1_2:+61515510 | Msa0082680:CDS |
| AGGAGCATGAACAGAAGCAA+TGG | 0.605978 | 1_2:-61519656 | None:intergenic |
| AAGAGAGTTAGCGATTTAGA+GGG | 0.608238 | 1_2:+61519920 | Msa0082680:three_prime_UTR |
| AGCATGAACAGAAGCAATGG+TGG | 0.610209 | 1_2:-61519653 | None:intergenic |
| CCTGTCGATATCATCATCCA+CGG | 0.616717 | 1_2:+61517061 | Msa0082680:CDS |
| ACCCGGTTCATATGTACAAG+GGG | 0.619952 | 1_2:+61516629 | Msa0082680:CDS |
| TGCGCGCCAGGAGATAACAC+AGG | 0.621580 | 1_2:-61516838 | None:intergenic |
| GCTGGCAATGAAGTGCCAGC+AGG | 0.622750 | 1_2:-61516498 | None:intergenic |
| TCCACCATATCCACAAAACC+CGG | 0.626060 | 1_2:-61515562 | None:intergenic |
| TAGATAGTAAAGACCCAACT+GGG | 0.626186 | 1_2:-61519359 | None:intergenic |
| ATTCTTGTGTGCTATACACC+AGG | 0.628639 | 1_2:+61519745 | Msa0082680:three_prime_UTR |
| CTGTCGATATCATCATCCAC+GGG | 0.629057 | 1_2:+61517062 | Msa0082680:CDS |
| TCCCGTGCTTCTTTCCCCAG+GGG | 0.630198 | 1_2:+61516659 | Msa0082680:CDS |
| TGCACCTGTTGATAAAATTG+AGG | 0.642079 | 1_2:-61516528 | None:intergenic |
| GCCCCTTGTACATATGAACC+GGG | 0.643721 | 1_2:-61516630 | None:intergenic |
| AAGATGATTATGTTTAGACA+GGG | 0.643889 | 1_2:+61519869 | Msa0082680:three_prime_UTR |
| TGGTGGTGTTGAATCTTACC+CGG | 0.644232 | 1_2:+61515500 | Msa0082680:CDS |
| AGCAGAAGCAGCAGACAGAG+TGG | 0.645532 | 1_2:+61519570 | Msa0082680:CDS |
| ACATATGAACCGGGTAACAC+AGG | 0.645643 | 1_2:-61516621 | None:intergenic |
| ATTACCGCAGCACGATCACG+CGG | 0.645892 | 1_2:-61515603 | None:intergenic |
| ATGCAAGTTTGATCATCCTG+CGG | 0.650257 | 1_2:+61519278 | Msa0082680:CDS |
| AGACCAAAGGGACTAAGAAG+TGG | 0.653237 | 1_2:-61517102 | None:intergenic |
| AAGTGCCAGCAGGTTGAGGA+TGG | 0.654749 | 1_2:-61516488 | None:intergenic |
| CAAAATTATACCTGACATGG+AGG | 0.657604 | 1_2:-61516086 | None:intergenic |
| TACCCGGTTCATATGTACAA+GGG | 0.670537 | 1_2:+61516628 | Msa0082680:CDS |
| GCTCCTATTATTTGAAAACG+GGG | 0.671672 | 1_2:+61516433 | Msa0082680:CDS |
| CGGGCGTAGAGGAAGACCAA+AGG | 0.672188 | 1_2:-61517115 | None:intergenic |
| TCACCCGCGTGATCGTGCTG+CGG | 0.674265 | 1_2:+61515599 | Msa0082680:CDS |
| AAAGTATTTCCTGAAAGACC+CGG | 0.677421 | 1_2:+61516985 | Msa0082680:CDS |
| GCGCGCCAGGAGATAACACA+GGG | 0.680593 | 1_2:-61516837 | None:intergenic |
| CTACAGGGGACTACCCGGAG+AGG | 0.687189 | 1_2:+61516054 | Msa0082680:CDS |
| AAGCATAAAAGAGAATGACC+TGG | 0.694248 | 1_2:-61519763 | None:intergenic |
| TGCTGCAGTAAGAGCTACAG+GGG | 0.695738 | 1_2:+61516040 | Msa0082680:CDS |
| GTTTATGTTCAGAGTCGATG+TGG | 0.699078 | 1_2:+61515457 | Msa0082680:intron |
| TATGAACCGGGTAACACAGG+AGG | 0.706559 | 1_2:-61516618 | None:intergenic |
| AGTTGCCATTAAATACTGAG+AGG | 0.712026 | 1_2:-61519676 | None:intergenic |
| AGGAAATGGAACAACCCCTG+GGG | 0.738169 | 1_2:-61516673 | None:intergenic |
| CCAATACTATATGAGAACTG+GGG | 0.738213 | 1_2:+61517020 | Msa0082680:CDS |
| TTACCGCAGCACGATCACGC+GGG | 0.739210 | 1_2:-61515602 | None:intergenic |
| GCAAGTTTGATCATCCTGCG+GGG | 0.750469 | 1_2:+61519280 | Msa0082680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTGTAATTTATTAATT+AGG | + | chr1_2:61515417-61515436 | Msa0082680:intron | 10.0% |
| !! | TTAATTGAATTTAACAATTT+AGG | - | chr1_2:61515740-61515759 | None:intergenic | 10.0% |
| !! | AAATTGTTAAATTCAATTAA+AGG | + | chr1_2:61515740-61515759 | Msa0082680:intron | 10.0% |
| !!! | CATTTTTTTCAATTTTTTAT+CGG | + | chr1_2:61515803-61515822 | Msa0082680:intron | 10.0% |
| !! | ATATTATTTACACATTTATA+TGG | - | chr1_2:61517244-61517263 | None:intergenic | 10.0% |
| !! | AAAAAATAAAATGAATGTTA+AGG | - | chr1_2:61517472-61517491 | None:intergenic | 10.0% |
| !!! | CATTATTTGTATATTTTTTA+TGG | + | chr1_2:61518195-61518214 | Msa0082680:intron | 10.0% |
| !! | AAATAATATGTATTCTATTC+AGG | + | chr1_2:61517255-61517274 | Msa0082680:intron | 15.0% |
| !! | AAATAAACACATTAATAGTT+GGG | - | chr1_2:61517598-61517617 | None:intergenic | 15.0% |
| !!! | ATTCAGACATTTATTTTAAT+CGG | - | chr1_2:61519142-61519161 | None:intergenic | 15.0% |
| !!! | TAATTTATTTTCTAGAAAAC+AGG | + | chr1_2:61519200-61519219 | Msa0082680:intron | 15.0% |
| !!! | AATTTATTTTCTAGAAAACA+GGG | + | chr1_2:61519201-61519220 | Msa0082680:intron | 15.0% |
| !!! | TTTTGTATATAAAATGAACA+AGG | - | chr1_2:61519234-61519253 | None:intergenic | 15.0% |
| !!! | TGTTCATTTTATATACAAAA+TGG | + | chr1_2:61519234-61519253 | Msa0082680:CDS | 15.0% |
| !!! | GTTCATTTTATATACAAAAT+GGG | + | chr1_2:61519235-61519254 | Msa0082680:CDS | 15.0% |
| !!! | TTTTGTTTGGGTTTTTTTTT+AGG | - | chr1_2:61515244-61515263 | None:intergenic | 20.0% |
| !! | AAAAAAAACCCAAACAAAAA+TGG | + | chr1_2:61515245-61515264 | Msa0082680:exon | 20.0% |
| !! | ATGTTATGTTATGTTATGTT+AGG | + | chr1_2:61515394-61515413 | Msa0082680:intron | 20.0% |
| !! | TGTTATGTTATGTTATGTTA+GGG | + | chr1_2:61515395-61515414 | Msa0082680:intron | 20.0% |
| !!! | ATTAATTAGGGTTTTGATTT+TGG | + | chr1_2:61515430-61515449 | Msa0082680:intron | 20.0% |
| !! | TAAAAGGGTTATACTAATTA+CGG | + | chr1_2:61516165-61516184 | Msa0082680:intron | 20.0% |
| !! | GAACAGTATTATTTAAAAAC+TGG | + | chr1_2:61516200-61516219 | Msa0082680:intron | 20.0% |
| !!! | TTTACAGAGAATTTTTCATA+TGG | + | chr1_2:61516364-61516383 | Msa0082680:intron | 20.0% |
| !!! | TATATATGTGATCTGAAATA+TGG | + | chr1_2:61516734-61516753 | Msa0082680:intron | 20.0% |
| !!! | CAAATCTCCTTTTAAAAAAA+GGG | + | chr1_2:61517318-61517337 | Msa0082680:intron | 20.0% |
| !! | CAAATAAACACATTAATAGT+TGG | - | chr1_2:61517599-61517618 | None:intergenic | 20.0% |
| !! | CAACTATTAATGTGTTTATT+TGG | + | chr1_2:61517597-61517616 | Msa0082680:intron | 20.0% |
| !! | TAATATCACGTTCATTAAAA+AGG | - | chr1_2:61518567-61518586 | None:intergenic | 20.0% |
| !! | TTAACTATCAATTCTGAATT+AGG | - | chr1_2:61518716-61518735 | None:intergenic | 20.0% |
| !!! | ATTACTTCGTAAGTAAATTT+TGG | + | chr1_2:61518907-61518926 | Msa0082680:intron | 20.0% |
| !!! | TAATCTAAAGCTACTTAATA+TGG | - | chr1_2:61519058-61519077 | None:intergenic | 20.0% |
| ! | CTCATATAATAAGCACAATT+CGG | - | chr1_2:61515540-61515559 | None:intergenic | 25.0% |
| ! | TGCATAAACCTATATTAGTA+AGG | + | chr1_2:61515912-61515931 | Msa0082680:intron | 25.0% |
| !!! | CCTTTTTTCCTTACTAATAT+AGG | - | chr1_2:61515923-61515942 | None:intergenic | 25.0% |
| ! | CCTATATTAGTAAGGAAAAA+AGG | + | chr1_2:61515920-61515939 | Msa0082680:intron | 25.0% |
| ! | AAACAAAATTATACCTGACA+TGG | - | chr1_2:61516092-61516111 | None:intergenic | 25.0% |
| ! | AAAAGGGTTATACTAATTAC+GGG | + | chr1_2:61516166-61516185 | Msa0082680:intron | 25.0% |
| ! | ATATGGTTAAACTTAAACCA+TGG | + | chr1_2:61516381-61516400 | Msa0082680:intron | 25.0% |
| !! | TGATGATTTTAAATTAGTGC+AGG | + | chr1_2:61516804-61516823 | Msa0082680:intron | 25.0% |
| !!! | TAAACTATAAGAAGTACTGA+TGG | - | chr1_2:61517293-61517312 | None:intergenic | 25.0% |
| ! | ATCAGTACTTCTTATAGTTT+AGG | + | chr1_2:61517292-61517311 | Msa0082680:intron | 25.0% |
| !!! | CCTTTTTTTAAAAGGAGATT+TGG | - | chr1_2:61517320-61517339 | None:intergenic | 25.0% |
| !!! | CCAAATCTCCTTTTAAAAAA+AGG | + | chr1_2:61517317-61517336 | Msa0082680:intron | 25.0% |
| !!! | TTTGGTTCCCTTTTTTTAAA+AGG | - | chr1_2:61517328-61517347 | None:intergenic | 25.0% |
| ! | CTTAAAAACCATGTTATCAA+GGG | - | chr1_2:61517515-61517534 | None:intergenic | 25.0% |
| ! | TCTTAAAAACCATGTTATCA+AGG | - | chr1_2:61517516-61517535 | None:intergenic | 25.0% |
| ! | TAGAGTTAGTTAAATCTTAG+CGG | + | chr1_2:61518158-61518177 | Msa0082680:intron | 25.0% |
| !! | TGTCTGTTTATTCTGAAAAA+TGG | + | chr1_2:61518378-61518397 | Msa0082680:intron | 25.0% |
| !! | GTCTGTTTATTCTGAAAAAT+GGG | + | chr1_2:61518379-61518398 | Msa0082680:intron | 25.0% |
| !! | TCTGTTTATTCTGAAAAATG+GGG | + | chr1_2:61518380-61518399 | Msa0082680:intron | 25.0% |
| ! | TACATCACTACATTGAAATT+TGG | - | chr1_2:61518758-61518777 | None:intergenic | 25.0% |
| ! | TAATACGCATCATAAATGAA+AGG | - | chr1_2:61519108-61519127 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGTGCATTCTTT+TGG | + | chr1_2:61519163-61519182 | Msa0082680:intron | 25.0% |
| !!! | TAATTTGTGTGCATTCTTTT+GGG | + | chr1_2:61519164-61519183 | Msa0082680:intron | 25.0% |
| ! | TGAAAAAATTAAACCAACAG+AGG | - | chr1_2:61519484-61519503 | None:intergenic | 25.0% |
| !!! | GTTGGTTTAATTTTTTCACA+AGG | + | chr1_2:61519486-61519505 | Msa0082680:CDS | 25.0% |
| !!! | GTTTAATTTTTTCACAAGGT+GGG | + | chr1_2:61519490-61519509 | Msa0082680:CDS | 25.0% |
| ! | TAAGATGATTATGTTTAGAC+AGG | + | chr1_2:61519868-61519887 | Msa0082680:three_prime_UTR | 25.0% |
| ! | AAGATGATTATGTTTAGACA+GGG | + | chr1_2:61519869-61519888 | Msa0082680:three_prime_UTR | 25.0% |
| ! | TAGAATGATCTAGAATGTTC+TGG | - | chr1_2:61515172-61515191 | None:intergenic | 30.0% |
| !! | GTACAAGTCCATTTTTGTTT+GGG | - | chr1_2:61515256-61515275 | None:intergenic | 30.0% |
| ! | CAAACAAAAATGGACTTGTA+CGG | + | chr1_2:61515255-61515274 | Msa0082680:exon | 30.0% |
| !!! | AATTAGGGTTTTGATTTTGG+TGG | + | chr1_2:61515433-61515452 | Msa0082680:intron | 30.0% |
| TGTGCTTATTATATGAGAAC+CGG | + | chr1_2:61515543-61515562 | Msa0082680:CDS | 30.0% | |
| AGGAATAAAATTAACCATCC+AGG | - | chr1_2:61515720-61515739 | None:intergenic | 30.0% | |
| ! | TCAGTGATATACATTTGCTA+AGG | + | chr1_2:61515836-61515855 | Msa0082680:intron | 30.0% |
| ! | CAGTGATATACATTTGCTAA+GGG | + | chr1_2:61515837-61515856 | Msa0082680:intron | 30.0% |
| ! | TAAGTGATGTACATTTGCTA+AGG | + | chr1_2:61515976-61515995 | Msa0082680:intron | 30.0% |
| ! | AAGTGATGTACATTTGCTAA+GGG | + | chr1_2:61515977-61515996 | Msa0082680:intron | 30.0% |
| ! | AACTGACTCAAATATTGTTC+AGG | + | chr1_2:61516013-61516032 | Msa0082680:intron | 30.0% |
| AAAACTGGAACCTGTAAATT+TGG | + | chr1_2:61516215-61516234 | Msa0082680:CDS | 30.0% | |
| CATAAATATTTAGTGGAGCT+TGG | - | chr1_2:61516289-61516308 | None:intergenic | 30.0% | |
| CAAGCTCCACTAAATATTTA+TGG | + | chr1_2:61516287-61516306 | Msa0082680:CDS | 30.0% | |
| GGGTATCCATAAATATTTAG+TGG | - | chr1_2:61516296-61516315 | None:intergenic | 30.0% | |
| !! | CATGGATTTTGTTTAACACA+GGG | + | chr1_2:61516399-61516418 | Msa0082680:intron | 30.0% |
| GTGCTCCTATTATTTGAAAA+CGG | + | chr1_2:61516431-61516450 | Msa0082680:CDS | 30.0% | |
| TGCTCCTATTATTTGAAAAC+GGG | + | chr1_2:61516432-61516451 | Msa0082680:CDS | 30.0% | |
| ! | ATATGTGATCTGAAATATGG+CGG | + | chr1_2:61516737-61516756 | Msa0082680:intron | 30.0% |
| AATTGAGATACCATTCATAC+CGG | - | chr1_2:61517138-61517157 | None:intergenic | 30.0% | |
| GTATGAATGGTATCTCAATT+TGG | + | chr1_2:61517138-61517157 | Msa0082680:intron | 30.0% | |
| GTTTAGACTAACAACAGATT+TGG | - | chr1_2:61517346-61517365 | None:intergenic | 30.0% | |
| AAGATTGTGATATTCCTCAT+AGG | + | chr1_2:61517532-61517551 | Msa0082680:intron | 30.0% | |
| CATTTCAGTGGAAATCTATT+AGG | - | chr1_2:61517676-61517695 | None:intergenic | 30.0% | |
| CTAATAGATTTCCACTGAAA+TGG | + | chr1_2:61517674-61517693 | Msa0082680:intron | 30.0% | |
| GTTCTTCAATTTATGAGACT+AGG | - | chr1_2:61517734-61517753 | None:intergenic | 30.0% | |
| AATGAAAGCGGAATAGATAT+GGG | - | chr1_2:61517777-61517796 | None:intergenic | 30.0% | |
| AAATGAAAGCGGAATAGATA+TGG | - | chr1_2:61517778-61517797 | None:intergenic | 30.0% | |
| CTCAGAATATCAAATGAAAG+CGG | - | chr1_2:61517789-61517808 | None:intergenic | 30.0% | |
| !!! | CTTGTGACTTTGTTTTAAGA+TGG | + | chr1_2:61517919-61517938 | Msa0082680:intron | 30.0% |
| GTTGTAATTCATGAAAGACA+TGG | - | chr1_2:61518101-61518120 | None:intergenic | 30.0% | |
| ! | CTGTTTATTCTGAAAAATGG+GGG | + | chr1_2:61518381-61518400 | Msa0082680:intron | 30.0% |
| AAGGAAATAGATTGAATAGC+AGG | - | chr1_2:61518548-61518567 | None:intergenic | 30.0% | |
| TTCTAAGTGTCTGTAAAACA+AGG | + | chr1_2:61518596-61518615 | Msa0082680:intron | 30.0% | |
| TTTGAATGCTTCTTTATCTC+AGG | + | chr1_2:61518671-61518690 | Msa0082680:intron | 30.0% | |
| ! | AATTAGGTTTTGCTAACCTT+GGG | - | chr1_2:61518700-61518719 | None:intergenic | 30.0% |
| ! | TTTGGAGTTGTAAACTGAAA+AGG | - | chr1_2:61518740-61518759 | None:intergenic | 30.0% |
| AAAGAATGGAAACTACGATA+CGG | - | chr1_2:61518804-61518823 | None:intergenic | 30.0% | |
| AAGCACAACTTAAGAAAGAA+TGG | - | chr1_2:61518818-61518837 | None:intergenic | 30.0% | |
| !!! | TCGTAAGTAAATTTTGGTTG+CGG | + | chr1_2:61518913-61518932 | Msa0082680:intron | 30.0% |
| CTTCAACATCTTCAGAATTT+CGG | + | chr1_2:61519391-61519410 | Msa0082680:CDS | 30.0% | |
| !!! | GGTTTAATTTTTTCACAAGG+TGG | + | chr1_2:61519489-61519508 | Msa0082680:CDS | 30.0% |
| !! | TTGGGTGACAAATTTTTCAA+TGG | - | chr1_2:61519720-61519739 | None:intergenic | 30.0% |
| CTTCATACTATTATGCTTTG+TGG | + | chr1_2:61519831-61519850 | Msa0082680:three_prime_UTR | 30.0% | |
| GAGAGAGACAGAAAGAAAAT+GGG | - | chr1_2:61515100-61515119 | None:intergenic | 35.0% | |
| !! | TCTAGAATGTTCTGGAAGAT+CGG | - | chr1_2:61515164-61515183 | None:intergenic | 35.0% |
| GTGTTTACGAGAAAGGAAAA+TGG | - | chr1_2:61515211-61515230 | None:intergenic | 35.0% | |
| !! | CGTACAAGTCCATTTTTGTT+TGG | - | chr1_2:61515257-61515276 | None:intergenic | 35.0% |
| GTGCTTATTATATGAGAACC+GGG | + | chr1_2:61515544-61515563 | Msa0082680:CDS | 35.0% | |
| !!! | TAGTAGATGCTATTTTTGCC+TGG | + | chr1_2:61515699-61515718 | Msa0082680:intron | 35.0% |
| CAAAATTATACCTGACATGG+AGG | - | chr1_2:61516089-61516108 | None:intergenic | 35.0% | |
| AAATTCCACCATCCCAAAAA+TGG | + | chr1_2:61516248-61516267 | Msa0082680:CDS | 35.0% | |
| !! | AAATATCCGCCTCCATTTTT+GGG | - | chr1_2:61516263-61516282 | None:intergenic | 35.0% |
| ! | TAAATATCCGCCTCCATTTT+TGG | - | chr1_2:61516264-61516283 | None:intergenic | 35.0% |
| AAGAAAAAGAAGAGTCGAAC+CGG | - | chr1_2:61516326-61516345 | None:intergenic | 35.0% | |
| CCTGTGTTAAACAAAATCCA+TGG | - | chr1_2:61516401-61516420 | None:intergenic | 35.0% | |
| !! | CCATGGATTTTGTTTAACAC+AGG | + | chr1_2:61516398-61516417 | Msa0082680:intron | 35.0% |
| GCTCCTATTATTTGAAAACG+GGG | + | chr1_2:61516433-61516452 | Msa0082680:CDS | 35.0% | |
| ! | TGCACCTCAATTTTATCAAC+AGG | + | chr1_2:61516524-61516543 | Msa0082680:CDS | 35.0% |
| ! | TGCACCTGTTGATAAAATTG+AGG | - | chr1_2:61516531-61516550 | None:intergenic | 35.0% |
| TATGTGTCTCTTACCGAATA+AGG | - | chr1_2:61516708-61516727 | None:intergenic | 35.0% | |
| ! | AAAGTATTTCCTGAAAGACC+CGG | + | chr1_2:61516985-61517004 | Msa0082680:CDS | 35.0% |
| TGCCAATACTATATGAGAAC+TGG | + | chr1_2:61517018-61517037 | Msa0082680:CDS | 35.0% | |
| GCCAATACTATATGAGAACT+GGG | + | chr1_2:61517019-61517038 | Msa0082680:CDS | 35.0% | |
| CCAATACTATATGAGAACTG+GGG | + | chr1_2:61517020-61517039 | Msa0082680:CDS | 35.0% | |
| ATTGAGATACCATTCATACC+GGG | - | chr1_2:61517137-61517156 | None:intergenic | 35.0% | |
| ATGTATTCTATTCAGGAGTC+AGG | + | chr1_2:61517262-61517281 | Msa0082680:intron | 35.0% | |
| ! | TTTTTGCAAAACTGCAGAGT+TGG | + | chr1_2:61517489-61517508 | Msa0082680:intron | 35.0% |
| ATAGATTTCCACTGAAATGG+CGG | + | chr1_2:61517677-61517696 | Msa0082680:intron | 35.0% | |
| ATGAAAGCGGAATAGATATG+GGG | - | chr1_2:61517776-61517795 | None:intergenic | 35.0% | |
| AGCTAAGAAAAAGATTGGAG+GGG | - | chr1_2:61517825-61517844 | None:intergenic | 35.0% | |
| GAGCTAAGAAAAAGATTGGA+GGG | - | chr1_2:61517826-61517845 | None:intergenic | 35.0% | |
| GATGGAGCTAAGAAAAAGAT+TGG | - | chr1_2:61517830-61517849 | None:intergenic | 35.0% | |
| ! | TTTTCTTAGCTCCATCATGT+CGG | + | chr1_2:61517834-61517853 | Msa0082680:intron | 35.0% |
| TGAACTCAACACTGTATCTT+TGG | + | chr1_2:61517943-61517962 | Msa0082680:intron | 35.0% | |
| CAAAGCAAAGAAAACAGTGT+GGG | - | chr1_2:61518021-61518040 | None:intergenic | 35.0% | |
| ACAAAGCAAAGAAAACAGTG+TGG | - | chr1_2:61518022-61518041 | None:intergenic | 35.0% | |
| TCAAAATTGAGATCCTTCCT+AGG | - | chr1_2:61518267-61518286 | None:intergenic | 35.0% | |
| ATTCCTTGATGGAACATGAT+TGG | + | chr1_2:61518299-61518318 | Msa0082680:intron | 35.0% | |
| GGATACATGGATCAAACTTA+TGG | + | chr1_2:61518402-61518421 | Msa0082680:intron | 35.0% | |
| GGATCAAACTTATGGTTACT+TGG | + | chr1_2:61518410-61518429 | Msa0082680:intron | 35.0% | |
| ! | TAGCTTGTGAGTATCTTATG+TGG | + | chr1_2:61518640-61518659 | Msa0082680:intron | 35.0% |
| AGCTTGTGAGTATCTTATGT+GGG | + | chr1_2:61518641-61518660 | Msa0082680:intron | 35.0% | |
| ! | GAATTAGGTTTTGCTAACCT+TGG | - | chr1_2:61518701-61518720 | None:intergenic | 35.0% |
| ! | TTCTTAAGTTGTGCTTTGCT+TGG | + | chr1_2:61518822-61518841 | Msa0082680:intron | 35.0% |
| TCAATAAGAGAAGATGCTGA+TGG | - | chr1_2:61519321-61519340 | None:intergenic | 35.0% | |
| TAGATAGTAAAGACCCAACT+GGG | - | chr1_2:61519362-61519381 | None:intergenic | 35.0% | |
| TTAGATAGTAAAGACCCAAC+TGG | - | chr1_2:61519363-61519382 | None:intergenic | 35.0% | |
| ! | CGAAATTCTGAAGATGTTGA+AGG | - | chr1_2:61519393-61519412 | None:intergenic | 35.0% |
| ATGCTCCTCTCAGTATTTAA+TGG | + | chr1_2:61519671-61519690 | Msa0082680:three_prime_UTR | 35.0% | |
| AGTTGCCATTAAATACTGAG+AGG | - | chr1_2:61519679-61519698 | None:intergenic | 35.0% | |
| AAGCATAAAAGAGAATGACC+TGG | - | chr1_2:61519766-61519785 | None:intergenic | 35.0% | |
| AAAGAGAGTTAGCGATTTAG+AGG | + | chr1_2:61519919-61519938 | Msa0082680:three_prime_UTR | 35.0% | |
| AAGAGAGTTAGCGATTTAGA+GGG | + | chr1_2:61519920-61519939 | Msa0082680:three_prime_UTR | 35.0% | |
| ! | TTTTTCTCTCTCTCTCTCTC+TGG | - | chr1_2:61514994-61515013 | None:intergenic | 40.0% |
| CGAGAGAGACAGAAAGAAAA+TGG | - | chr1_2:61515101-61515120 | None:intergenic | 40.0% | |
| CTGTACAGTGTTTACGAGAA+AGG | - | chr1_2:61515218-61515237 | None:intergenic | 40.0% | |
| CTTTCTCGTAAACACTGTAC+AGG | + | chr1_2:61515216-61515235 | Msa0082680:five_prime_UTR | 40.0% | |
| ! | CAAAAATGGACTTGTACGGT+CGG | + | chr1_2:61515259-61515278 | Msa0082680:exon | 40.0% |
| ! | TTCATGTTGATTAAGCGGGT+TGG | - | chr1_2:61515304-61515323 | None:intergenic | 40.0% |
| ACCCGCTTAATCAACATGAA+TGG | + | chr1_2:61515304-61515323 | Msa0082680:CDS | 40.0% | |
| ! | GCCATTCATGTTGATTAAGC+GGG | - | chr1_2:61515308-61515327 | None:intergenic | 40.0% |
| ! | CGCCATTCATGTTGATTAAG+CGG | - | chr1_2:61515309-61515328 | None:intergenic | 40.0% |
| GTTTATGTTCAGAGTCGATG+TGG | + | chr1_2:61515457-61515476 | Msa0082680:intron | 40.0% | |
| TCGATGTGGCATTTATCACT+TGG | + | chr1_2:61515471-61515490 | Msa0082680:CDS | 40.0% | |
| ATGTGGCATTTATCACTTGG+TGG | + | chr1_2:61515474-61515493 | Msa0082680:CDS | 40.0% | |
| ! | TATATGAGAACCGGGTTTTG+TGG | + | chr1_2:61515552-61515571 | Msa0082680:CDS | 40.0% |
| !!! | AGATGCTATTTTTGCCTGGA+TGG | + | chr1_2:61515703-61515722 | Msa0082680:intron | 40.0% |
| TTATGGATACCCATTACGAC+CGG | + | chr1_2:61516304-61516323 | Msa0082680:CDS | 40.0% | |
| ! | CTGCCCCGTTTTCAAATAAT+AGG | - | chr1_2:61516439-61516458 | None:intergenic | 40.0% |
| TAAAATTGAGGTGCAGATGC+TGG | - | chr1_2:61516519-61516538 | None:intergenic | 40.0% | |
| TTACCCGGTTCATATGTACA+AGG | + | chr1_2:61516627-61516646 | Msa0082680:CDS | 40.0% | |
| TACCCGGTTCATATGTACAA+GGG | + | chr1_2:61516628-61516647 | Msa0082680:CDS | 40.0% | |
| TCATATGTACAAGGGGCTTA+TGG | + | chr1_2:61516636-61516655 | Msa0082680:CDS | 40.0% | |
| !! | CTCATATAGTATTGGCAGAC+CGG | - | chr1_2:61517015-61517034 | None:intergenic | 40.0% |
| CCCCAGTTCTCATATAGTAT+TGG | - | chr1_2:61517023-61517042 | None:intergenic | 40.0% | |
| AGAACTGGGGACTGTAAATT+TGG | + | chr1_2:61517033-61517052 | Msa0082680:CDS | 40.0% | |
| GTGCGTACATGTATTATGTG+TGG | + | chr1_2:61517562-61517581 | Msa0082680:intron | 40.0% | |
| ACCAGGTTAGTGTGTATACT+TGG | - | chr1_2:61517627-61517646 | None:intergenic | 40.0% | |
| GTATACACACTAACCTGGTT+TGG | + | chr1_2:61517628-61517647 | Msa0082680:intron | 40.0% | |
| ! | AAAGTTTTCCGCCATTTCAG+TGG | - | chr1_2:61517688-61517707 | None:intergenic | 40.0% |
| ATTGAAGAACCCCATCCTTA+TGG | + | chr1_2:61517744-61517763 | Msa0082680:intron | 40.0% | |
| GGAGCTAAGAAAAAGATTGG+AGG | - | chr1_2:61517827-61517846 | None:intergenic | 40.0% | |
| AAGATGAAACACCCACAAAG+GGG | - | chr1_2:61517902-61517921 | None:intergenic | 40.0% | |
| CAAGATGAAACACCCACAAA+GGG | - | chr1_2:61517903-61517922 | None:intergenic | 40.0% | |
| ACAAGATGAAACACCCACAA+AGG | - | chr1_2:61517904-61517923 | None:intergenic | 40.0% | |
| ATCTTTGGTCAAGACCCATA+AGG | + | chr1_2:61517958-61517977 | Msa0082680:intron | 40.0% | |
| GAGAAACAGGTAGTCCTTAT+GGG | - | chr1_2:61517975-61517994 | None:intergenic | 40.0% | |
| TGAGAAACAGGTAGTCCTTA+TGG | - | chr1_2:61517976-61517995 | None:intergenic | 40.0% | |
| ! | ACTACCTGTTTCTCACTGTT+GGG | + | chr1_2:61517981-61518000 | Msa0082680:intron | 40.0% |
| TTCTCTTCCCAATTGATCCT+AGG | + | chr1_2:61518247-61518266 | Msa0082680:intron | 40.0% | |
| GATCCTTCCTAGGATCAATT+GGG | - | chr1_2:61518257-61518276 | None:intergenic | 40.0% | |
| AGATCCTTCCTAGGATCAAT+TGG | - | chr1_2:61518258-61518277 | None:intergenic | 40.0% | |
| AACCTTGCTTGATTCCTTGA+TGG | + | chr1_2:61518288-61518307 | Msa0082680:intron | 40.0% | |
| TTCCATCAAGGAATCAAGCA+AGG | - | chr1_2:61518293-61518312 | None:intergenic | 40.0% | |
| AAGCCAATCATGTTCCATCA+AGG | - | chr1_2:61518305-61518324 | None:intergenic | 40.0% | |
| !! | AGACCCAAGCTTTTGTTTGA+GGG | - | chr1_2:61518345-61518364 | None:intergenic | 40.0% |
| TCTGAAAAATGGGGGATACA+TGG | + | chr1_2:61518389-61518408 | Msa0082680:intron | 40.0% | |
| TAACTTGAGCTTAGGAGAGT+TGG | - | chr1_2:61518471-61518490 | None:intergenic | 40.0% | |
| CTCTCCTAAGCTCAAGTTAT+TGG | + | chr1_2:61518472-61518491 | Msa0082680:intron | 40.0% | |
| GCATCCAATAACTTGAGCTT+AGG | - | chr1_2:61518479-61518498 | None:intergenic | 40.0% | |
| ATTGGATGCATGCACATGAT+TGG | + | chr1_2:61518490-61518509 | Msa0082680:intron | 40.0% | |
| TCTTTATCTCAGGAAACCCA+AGG | + | chr1_2:61518681-61518700 | Msa0082680:intron | 40.0% | |
| TAAGTTGTGCTTTGCTTGGT+TGG | + | chr1_2:61518826-61518845 | Msa0082680:intron | 40.0% | |
| ATCAAAAGTCCCCTGTAAGA+GGG | - | chr1_2:61518952-61518971 | None:intergenic | 40.0% | |
| ATGCAAGTTTGATCATCCTG+CGG | + | chr1_2:61519278-61519297 | Msa0082680:CDS | 40.0% | |
| TGGGTCTTTACTATCTAACC+TGG | + | chr1_2:61519365-61519384 | Msa0082680:CDS | 40.0% | |
| CATTCATCTGGAAATGGTTC+TGG | + | chr1_2:61519456-61519475 | Msa0082680:CDS | 40.0% | |
| CAGAGTTCTGCTTCTTTGAA+CGG | + | chr1_2:61519546-61519565 | Msa0082680:CDS | 40.0% | |
| AGCACACAAGAATCACGATT+GGG | - | chr1_2:61519738-61519757 | None:intergenic | 40.0% | |
| TAGCACACAAGAATCACGAT+TGG | - | chr1_2:61519739-61519758 | None:intergenic | 40.0% | |
| ATTCTTGTGTGCTATACACC+AGG | + | chr1_2:61519745-61519764 | Msa0082680:three_prime_UTR | 40.0% | |
| TATGCTTTGTGGACTTATGC+TGG | + | chr1_2:61519842-61519861 | Msa0082680:three_prime_UTR | 40.0% | |
| TTTCTTCCTGCTCTGTACAA+AGG | + | chr1_2:61519895-61519914 | Msa0082680:three_prime_UTR | 40.0% | |
| TCTTTACCTTTGTACAGAGC+AGG | - | chr1_2:61519904-61519923 | None:intergenic | 40.0% | |
| ! | CTCTCTCTCTGGAAACTGTA+CGG | - | chr1_2:61514983-61515002 | None:intergenic | 45.0% |
| ! | TGGCATTTATCACTTGGTGG+TGG | + | chr1_2:61515477-61515496 | Msa0082680:CDS | 45.0% |
| !! | CATTTATCACTTGGTGGTGG+TGG | + | chr1_2:61515480-61515499 | Msa0082680:CDS | 45.0% |
| ! | TGGTGGTGTTGAATCTTACC+CGG | + | chr1_2:61515500-61515519 | Msa0082680:CDS | 45.0% |
| !! | AGAACCGGGTTTTGTGGATA+TGG | + | chr1_2:61515558-61515577 | Msa0082680:CDS | 45.0% |
| TCCACCATATCCACAAAACC+CGG | - | chr1_2:61515565-61515584 | None:intergenic | 45.0% | |
| !! | GGTTTTGTGGATATGGTGGA+AGG | + | chr1_2:61515565-61515584 | Msa0082680:CDS | 45.0% |
| ACAAGACGCGCCAAATTTAC+AGG | - | chr1_2:61516228-61516247 | None:intergenic | 45.0% | |
| TTCCACCATCCCAAAAATGG+AGG | + | chr1_2:61516251-61516270 | Msa0082680:CDS | 45.0% | |
| AAAACGGGGCAGTGCAAATT+TGG | + | chr1_2:61516447-61516466 | Msa0082680:CDS | 45.0% | |
| ACATATGAACCGGGTAACAC+AGG | - | chr1_2:61516624-61516643 | None:intergenic | 45.0% | |
| ACCCGGTTCATATGTACAAG+GGG | + | chr1_2:61516629-61516648 | Msa0082680:CDS | 45.0% | |
| AGCCCCTTGTACATATGAAC+CGG | - | chr1_2:61516634-61516653 | None:intergenic | 45.0% | |
| TAAGGACTCCATCCAGGAAA+TGG | - | chr1_2:61516690-61516709 | None:intergenic | 45.0% | |
| TCCTGGATGGAGTCCTTATT+CGG | + | chr1_2:61516692-61516711 | Msa0082680:CDS | 45.0% | |
| GTTGGGGCTACTTCTCTTTA+CGG | + | chr1_2:61516868-61516887 | Msa0082680:CDS | 45.0% | |
| CCTGTCGATATCATCATCCA+CGG | + | chr1_2:61517061-61517080 | Msa0082680:CDS | 45.0% | |
| CTGTCGATATCATCATCCAC+GGG | + | chr1_2:61517062-61517081 | Msa0082680:CDS | 45.0% | |
| AGACCAAAGGGACTAAGAAG+TGG | - | chr1_2:61517105-61517124 | None:intergenic | 45.0% | |
| AACAAGTTAGACACCAGGCA+GGG | - | chr1_2:61517401-61517420 | None:intergenic | 45.0% | |
| ! | AGAGTTGGCCCTTGATAACA+TGG | + | chr1_2:61517504-61517523 | Msa0082680:intron | 45.0% |
| TACGCACGAGTAATCCTATG+AGG | - | chr1_2:61517549-61517568 | None:intergenic | 45.0% | |
| GCCAAGTATACACACTAACC+TGG | + | chr1_2:61517623-61517642 | Msa0082680:intron | 45.0% | |
| TACAGCAATCTCACCAAACC+AGG | - | chr1_2:61517644-61517663 | None:intergenic | 45.0% | |
| !! | TGGTTTGGTGAGATTGCTGT+AGG | + | chr1_2:61517643-61517662 | Msa0082680:intron | 45.0% |
| GATATGGGGAAACAGCCATA+AGG | - | chr1_2:61517762-61517781 | None:intergenic | 45.0% | |
| !! | TGCAGAGTTTTAGCACCACT+CGG | - | chr1_2:61517871-61517890 | None:intergenic | 45.0% |
| ! | GTGGTGCTAAAACTCTGCAT+TGG | + | chr1_2:61517872-61517891 | Msa0082680:intron | 45.0% |
| ! | GACTACCTGTTTCTCACTGT+TGG | + | chr1_2:61517980-61517999 | Msa0082680:intron | 45.0% |
| AGTTCCCAACAGTGAGAAAC+AGG | - | chr1_2:61517988-61518007 | None:intergenic | 45.0% | |
| GTTTCTCACTGTTGGGAACT+TGG | + | chr1_2:61517988-61518007 | Msa0082680:intron | 45.0% | |
| CTTCCCAATTGATCCTAGGA+AGG | + | chr1_2:61518251-61518270 | Msa0082680:intron | 45.0% | |
| !! | AAGCTTTTGTTTGAGGGAGC+AGG | - | chr1_2:61518339-61518358 | None:intergenic | 45.0% |
| TGCTCCCTCAAACAAAAGCT+TGG | + | chr1_2:61518338-61518357 | Msa0082680:intron | 45.0% | |
| GCTCCCTCAAACAAAAGCTT+GGG | + | chr1_2:61518339-61518358 | Msa0082680:intron | 45.0% | |
| !! | CAGACCCAAGCTTTTGTTTG+AGG | - | chr1_2:61518346-61518365 | None:intergenic | 45.0% |
| GAAGCCATGATACCATGTCA+AGG | + | chr1_2:61518444-61518463 | Msa0082680:intron | 45.0% | |
| TGGTCCTTGACATGGTATCA+TGG | - | chr1_2:61518451-61518470 | None:intergenic | 45.0% | |
| !! | TTGGTGTCATAGCATGGTTG+AGG | + | chr1_2:61518845-61518864 | Msa0082680:intron | 45.0% |
| !! | TGGTGTCATAGCATGGTTGA+GGG | + | chr1_2:61518846-61518865 | Msa0082680:intron | 45.0% |
| GGTTGAGGGGATATGAAACA+TGG | + | chr1_2:61518860-61518879 | Msa0082680:intron | 45.0% | |
| TGGCTACAACAAAAGCGATG+TGG | + | chr1_2:61518880-61518899 | Msa0082680:intron | 45.0% | |
| !! | ATCGTTTTTGCCCCTCTTAC+AGG | + | chr1_2:61518938-61518957 | Msa0082680:intron | 45.0% |
| !! | TCGTTTTTGCCCCTCTTACA+GGG | + | chr1_2:61518939-61518958 | Msa0082680:intron | 45.0% |
| TCAAAAGTCCCCTGTAAGAG+GGG | - | chr1_2:61518951-61518970 | None:intergenic | 45.0% | |
| CATCAAAAGTCCCCTGTAAG+AGG | - | chr1_2:61518953-61518972 | None:intergenic | 45.0% | |
| ! | CTCTTACAGGGGACTTTTGA+TGG | + | chr1_2:61518951-61518970 | Msa0082680:intron | 45.0% |
| ! | CAAAATGGGCACTGCAAGTT+TGG | + | chr1_2:61519249-61519268 | Msa0082680:CDS | 45.0% |
| TGCAAGTTTGATCATCCTGC+GGG | + | chr1_2:61519279-61519298 | Msa0082680:CDS | 45.0% | |
| AGTAAAGACCCAACTGGGTA+TGG | - | chr1_2:61519357-61519376 | None:intergenic | 45.0% | |
| CTGAAGATGTTGAAGGAACC+AGG | - | chr1_2:61519386-61519405 | None:intergenic | 45.0% | |
| !! | AATGGTTCTGGTACCTCTGT+TGG | + | chr1_2:61519468-61519487 | Msa0082680:CDS | 45.0% |
| CGTTCAAAGAAGCAGAACTC+TGG | - | chr1_2:61519548-61519567 | None:intergenic | 45.0% | |
| AGCATGAACAGAAGCAATGG+TGG | - | chr1_2:61519656-61519675 | None:intergenic | 45.0% | |
| ! | AGGAGCATGAACAGAAGCAA+TGG | - | chr1_2:61519659-61519678 | None:intergenic | 45.0% |
| !!! | ATTTTGTAATTTATTAATTA+GGG | + | chr1_2:61515418-61515437 | Msa0082680:intron | 5.0% |
| !! | TATATTTACTATTTAATAAA+AGG | + | chr1_2:61516149-61516168 | Msa0082680:intron | 5.0% |
| !! | ATATTTACTATTTAATAAAA+GGG | + | chr1_2:61516150-61516169 | Msa0082680:intron | 5.0% |
| CACACGAACGAGAGAACACA+AGG | + | chr1_2:61515056-61515075 | Msa0082680:five_prime_UTR | 50.0% | |
| !! | GGTTGGATCCGTTTCTAGTG+GGG | - | chr1_2:61515287-61515306 | None:intergenic | 50.0% |
| !! | GGGTTGGATCCGTTTCTAGT+GGG | - | chr1_2:61515288-61515307 | None:intergenic | 50.0% |
| !! | TTATCACTTGGTGGTGGTGG+TGG | + | chr1_2:61515483-61515502 | Msa0082680:CDS | 50.0% |
| GAATCTTACCCGGAGAGACA+TGG | + | chr1_2:61515510-61515529 | Msa0082680:CDS | 50.0% | |
| TTCGGTACACCATGTCTCTC+CGG | - | chr1_2:61515522-61515541 | None:intergenic | 50.0% | |
| !! | ACCGGGTTTTGTGGATATGG+TGG | + | chr1_2:61515561-61515580 | Msa0082680:CDS | 50.0% |
| GATCACGCGGGTGATTGAAA+CGG | - | chr1_2:61515593-61515612 | None:intergenic | 50.0% | |
| CTGCTGCAGTAAGAGCTACA+GGG | + | chr1_2:61516039-61516058 | Msa0082680:CDS | 50.0% | |
| TGCTGCAGTAAGAGCTACAG+GGG | + | chr1_2:61516040-61516059 | Msa0082680:CDS | 50.0% | |
| CACCATCCCAAAAATGGAGG+CGG | + | chr1_2:61516254-61516273 | Msa0082680:CDS | 50.0% | |
| !! | ATCCGCCTCCATTTTTGGGA+TGG | - | chr1_2:61516259-61516278 | None:intergenic | 50.0% |
| AGAGTCGAACCGGTCGTAAT+GGG | - | chr1_2:61516316-61516335 | None:intergenic | 50.0% | |
| AAGAGTCGAACCGGTCGTAA+TGG | - | chr1_2:61516317-61516336 | None:intergenic | 50.0% | |
| ! | AATGAAGTGCCAGCAGGTTG+AGG | - | chr1_2:61516495-61516514 | None:intergenic | 50.0% |
| TCAACAGGTGCAGTCTCCAA+CGG | + | chr1_2:61516539-61516558 | Msa0082680:CDS | 50.0% | |
| GAAGCTCCTCCAAACTGTTC+CGG | - | chr1_2:61516576-61516595 | None:intergenic | 50.0% | |
| AGCTTCTGCAAGTGTGAGAG+TGG | + | chr1_2:61516590-61516609 | Msa0082680:CDS | 50.0% | |
| TATGAACCGGGTAACACAGG+AGG | - | chr1_2:61516621-61516640 | None:intergenic | 50.0% | |
| GCCCCTTGTACATATGAACC+GGG | - | chr1_2:61516633-61516652 | None:intergenic | 50.0% | |
| AGGAAATGGAACAACCCCTG+GGG | - | chr1_2:61516676-61516695 | None:intergenic | 50.0% | |
| CAGGAAATGGAACAACCCCT+GGG | - | chr1_2:61516677-61516696 | None:intergenic | 50.0% | |
| GGGTTGTTCCATTTCCTGGA+TGG | + | chr1_2:61516679-61516698 | Msa0082680:CDS | 50.0% | |
| ACCGAATAAGGACTCCATCC+AGG | - | chr1_2:61516696-61516715 | None:intergenic | 50.0% | |
| GGAGATAACACAGGGCTTAC+AGG | - | chr1_2:61516832-61516851 | None:intergenic | 50.0% | |
| GTAAGCCCTGTGTTATCTCC+TGG | + | chr1_2:61516832-61516851 | Msa0082680:CDS | 50.0% | |
| ! | GAAGAGGGCAGAGGAGTATA+AGG | - | chr1_2:61516934-61516953 | None:intergenic | 50.0% |
| CCTGAAGTGTGTTTCCTCCA+GGG | - | chr1_2:61516963-61516982 | None:intergenic | 50.0% | |
| TCCTGAAGTGTGTTTCCTCC+AGG | - | chr1_2:61516964-61516983 | None:intergenic | 50.0% | |
| CCGTGGATGATGATATCGAC+AGG | - | chr1_2:61517064-61517083 | None:intergenic | 50.0% | |
| ATATCATCATCCACGGGACC+AGG | + | chr1_2:61517068-61517087 | Msa0082680:CDS | 50.0% | |
| CGACCACTTCTTAGTCCCTT+TGG | + | chr1_2:61517099-61517118 | Msa0082680:CDS | 50.0% | |
| TTAAGACCAATGTCCCTGCC+TGG | + | chr1_2:61517385-61517404 | Msa0082680:intron | 50.0% | |
| CAACAAGTTAGACACCAGGC+AGG | - | chr1_2:61517402-61517421 | None:intergenic | 50.0% | |
| CAGGCAACAAGTTAGACACC+AGG | - | chr1_2:61517406-61517425 | None:intergenic | 50.0% | |
| AATGCAACTAAAGCCAGCGC+AGG | - | chr1_2:61517425-61517444 | None:intergenic | 50.0% | |
| !! | TGCGCTGGCTTTAGTTGCAT+TGG | + | chr1_2:61517424-61517443 | Msa0082680:intron | 50.0% |
| !! | GCGCTGGCTTTAGTTGCATT+GGG | + | chr1_2:61517425-61517444 | Msa0082680:intron | 50.0% |
| !! | CGCTGGCTTTAGTTGCATTG+GGG | + | chr1_2:61517426-61517445 | Msa0082680:intron | 50.0% |
| GGGAAACAGCCATAAGGATG+GGG | - | chr1_2:61517756-61517775 | None:intergenic | 50.0% | |
| GGGGAAACAGCCATAAGGAT+GGG | - | chr1_2:61517757-61517776 | None:intergenic | 50.0% | |
| TGGGGAAACAGCCATAAGGA+TGG | - | chr1_2:61517758-61517777 | None:intergenic | 50.0% | |
| TCTTAGCTCCATCATGTCGG+TGG | + | chr1_2:61517837-61517856 | Msa0082680:intron | 50.0% | |
| TGCATTGGAGTTCCCCTTTG+TGG | + | chr1_2:61517887-61517906 | Msa0082680:intron | 50.0% | |
| GCATTGGAGTTCCCCTTTGT+GGG | + | chr1_2:61517888-61517907 | Msa0082680:intron | 50.0% | |
| ! | AGGAGAGTTGGTCCTTGACA+TGG | - | chr1_2:61518459-61518478 | None:intergenic | 50.0% |
| !! | GCTTGGTTGGTGTCATAGCA+TGG | + | chr1_2:61518839-61518858 | Msa0082680:intron | 50.0% |
| ! | GGTGTCATAGCATGGTTGAG+GGG | + | chr1_2:61518847-61518866 | Msa0082680:intron | 50.0% |
| ! | CGTTTTTGCCCCTCTTACAG+GGG | + | chr1_2:61518940-61518959 | Msa0082680:intron | 50.0% |
| GCAAGTTTGATCATCCTGCG+GGG | + | chr1_2:61519280-61519299 | Msa0082680:CDS | 50.0% | |
| CAGTTGCTCCATACCCAGTT+GGG | + | chr1_2:61519346-61519365 | Msa0082680:CDS | 50.0% | |
| TTTCGGCCTGAACTGAAGTC+AGG | + | chr1_2:61519408-61519427 | Msa0082680:CDS | 50.0% | |
| TTCGGCCTGAACTGAAGTCA+GGG | + | chr1_2:61519409-61519428 | Msa0082680:CDS | 50.0% | |
| TTGGACCCTGACTTCAGTTC+AGG | - | chr1_2:61519417-61519436 | None:intergenic | 50.0% | |
| ! | CTCGACTCGACGAGGAAGTT+AGG | + | chr1_2:61515117-61515136 | Msa0082680:five_prime_UTR | 55.0% |
| ! | CGGGTTGGATCCGTTTCTAG+TGG | - | chr1_2:61515289-61515308 | None:intergenic | 55.0% |
| AGAGCAGTAGCATCAGCAGC+AGG | - | chr1_2:61515336-61515355 | None:intergenic | 55.0% | |
| GCTGCTGATGCTACTGCTCT+TGG | + | chr1_2:61515336-61515355 | Msa0082680:CDS | 55.0% | |
| GCTGATGCTACTGCTCTTGG+AGG | + | chr1_2:61515339-61515358 | Msa0082680:CDS | 55.0% | |
| TCGGTACACCATGTCTCTCC+GGG | - | chr1_2:61515521-61515540 | None:intergenic | 55.0% | |
| ATTACCGCAGCACGATCACG+CGG | - | chr1_2:61515606-61515625 | None:intergenic | 55.0% | |
| GCTGCTGCAGTAAGAGCTAC+AGG | + | chr1_2:61516038-61516057 | Msa0082680:CDS | 55.0% | |
| AAGAGCTACAGGGGACTACC+CGG | + | chr1_2:61516049-61516068 | Msa0082680:CDS | 55.0% | |
| !!! | CGCCTCCATTTTTGGGATGG+TGG | - | chr1_2:61516256-61516275 | None:intergenic | 55.0% |
| TTCCACCATCCTCAACCTGC+TGG | + | chr1_2:61516483-61516502 | Msa0082680:CDS | 55.0% | |
| ! | AAGTGCCAGCAGGTTGAGGA+TGG | - | chr1_2:61516491-61516510 | None:intergenic | 55.0% |
| GCTAGACCTCCTGTGTTACC+CGG | + | chr1_2:61516612-61516631 | Msa0082680:CDS | 55.0% | |
| AACCCCTGGGGAAAGAAGCA+CGG | - | chr1_2:61516664-61516683 | None:intergenic | 55.0% | |
| CCAGGAAATGGAACAACCCC+TGG | - | chr1_2:61516678-61516697 | None:intergenic | 55.0% | |
| CCAGGGGTTGTTCCATTTCC+TGG | + | chr1_2:61516675-61516694 | Msa0082680:CDS | 55.0% | |
| AGAGAAGTAGCCCCAACAGC+AGG | - | chr1_2:61516865-61516884 | None:intergenic | 55.0% | |
| CCCTGGAGGAAACACACTTC+AGG | + | chr1_2:61516960-61516979 | Msa0082680:CDS | 55.0% | |
| TCCTGAAAGACCCGGTGAAC+CGG | + | chr1_2:61516993-61517012 | Msa0082680:CDS | 55.0% | |
| ! | TATTGGCAGACCGGTTCACC+GGG | - | chr1_2:61517006-61517025 | None:intergenic | 55.0% |
| ! | GTATTGGCAGACCGGTTCAC+CGG | - | chr1_2:61517007-61517026 | None:intergenic | 55.0% |
| GGGCGTAGAGGAAGACCAAA+GGG | - | chr1_2:61517117-61517136 | None:intergenic | 55.0% | |
| ! | CTTTGGTCTTCCTCTACGCC+CGG | + | chr1_2:61517116-61517135 | Msa0082680:CDS | 55.0% |
| TCCTCTACGCCCGGTATGAA+TGG | + | chr1_2:61517125-61517144 | Msa0082680:intron | 55.0% | |
| ACCATTCATACCGGGCGTAG+AGG | - | chr1_2:61517129-61517148 | None:intergenic | 55.0% | |
| TAGACACCAGGCAGGGACAT+TGG | - | chr1_2:61517394-61517413 | None:intergenic | 55.0% | |
| !! | GTCTAACTTGTTGCCTGCGC+TGG | + | chr1_2:61517409-61517428 | Msa0082680:intron | 55.0% |
| TTGCAGCACCACCGACATGA+TGG | - | chr1_2:61517848-61517867 | None:intergenic | 55.0% | |
| CTGTATCTCATTGACCCCGC+AGG | - | chr1_2:61519297-61519316 | None:intergenic | 55.0% | |
| CCAACTGGGTATGGAGCAAC+TGG | - | chr1_2:61519348-61519367 | None:intergenic | 55.0% | |
| CCAGTTGCTCCATACCCAGT+TGG | + | chr1_2:61519345-61519364 | Msa0082680:CDS | 55.0% | |
| AGCAGAAGCAGCAGACAGAG+TGG | + | chr1_2:61519570-61519589 | Msa0082680:CDS | 55.0% | |
| ! | CTGTCTCTCTCGACTCGACG+AGG | + | chr1_2:61515109-61515128 | Msa0082680:five_prime_UTR | 60.0% |
| GGTCGGAGCCCCACTAGAAA+CGG | + | chr1_2:61515276-61515295 | Msa0082680:CDS | 60.0% | |
| TTACCGCAGCACGATCACGC+GGG | - | chr1_2:61515605-61515624 | None:intergenic | 60.0% | |
| GCTTGGCGAACCTCCATGTC+AGG | + | chr1_2:61516076-61516095 | Msa0082680:CDS | 60.0% | |
| ! | TGCCAGCAGGTTGAGGATGG+TGG | - | chr1_2:61516488-61516507 | None:intergenic | 60.0% |
| ! | GCTGGCAATGAAGTGCCAGC+AGG | - | chr1_2:61516501-61516520 | None:intergenic | 60.0% |
| TCCAACGGTTCCTCCTCTGC+CGG | + | chr1_2:61516554-61516573 | Msa0082680:CDS | 60.0% | |
| CCAAACTGTTCCGGCAGAGG+AGG | - | chr1_2:61516567-61516586 | None:intergenic | 60.0% | |
| CCTCCTCTGCCGGAACAGTT+TGG | + | chr1_2:61516564-61516583 | Msa0082680:CDS | 60.0% | |
| CCTCCAAACTGTTCCGGCAG+AGG | - | chr1_2:61516570-61516589 | None:intergenic | 60.0% | |
| CCTCTGCCGGAACAGTTTGG+AGG | + | chr1_2:61516567-61516586 | Msa0082680:CDS | 60.0% | |
| GTCCCGTGCTTCTTTCCCCA+GGG | + | chr1_2:61516658-61516677 | Msa0082680:CDS | 60.0% | |
| TCCCGTGCTTCTTTCCCCAG+GGG | + | chr1_2:61516659-61516678 | Msa0082680:CDS | 60.0% | |
| ! | ACCCCTGGGGAAAGAAGCAC+GGG | - | chr1_2:61516663-61516682 | None:intergenic | 60.0% |
| GCGCGCCAGGAGATAACACA+GGG | - | chr1_2:61516840-61516859 | None:intergenic | 60.0% | |
| TGCGCGCCAGGAGATAACAC+AGG | - | chr1_2:61516841-61516860 | None:intergenic | 60.0% | |
| ACTCCTCTGCCCTCTTCTCC+TGG | + | chr1_2:61516937-61516956 | Msa0082680:CDS | 60.0% | |
| AGTGTGTTTCCTCCAGGGCC+AGG | - | chr1_2:61516958-61516977 | None:intergenic | 60.0% | |
| ! | ACCGGTTCACCGGGTCTTTC+AGG | - | chr1_2:61516997-61517016 | None:intergenic | 60.0% |
| GAAGTGGTCGTGCAGCAACC+TGG | - | chr1_2:61517089-61517108 | None:intergenic | 60.0% | |
| CGGGCGTAGAGGAAGACCAA+AGG | - | chr1_2:61517118-61517137 | None:intergenic | 60.0% | |
| GGTGGGTCTGTCTCACTGTC+TGG | + | chr1_2:61519507-61519526 | Msa0082680:CDS | 60.0% | |
| TCACCCGCGTGATCGTGCTG+CGG | + | chr1_2:61515599-61515618 | Msa0082680:CDS | 65.0% | |
| CTACAGGGGACTACCCGGAG+AGG | + | chr1_2:61516054-61516073 | Msa0082680:CDS | 65.0% | |
| GAGGTTCGCCAAGCCTCTCC+GGG | - | chr1_2:61516070-61516089 | None:intergenic | 65.0% | |
| GGAGGTTCGCCAAGCCTCTC+CGG | - | chr1_2:61516071-61516090 | None:intergenic | 65.0% | |
| TCCGGCAGAGGAGGAACCGT+TGG | - | chr1_2:61516558-61516577 | None:intergenic | 65.0% | |
| GGTCCCGTGCTTCTTTCCCC+AGG | + | chr1_2:61516657-61516676 | Msa0082680:CDS | 65.0% | |
| CTGGCGCGCAACCTGCTGTT+GGG | + | chr1_2:61516851-61516870 | Msa0082680:CDS | 65.0% | |
| TGGCGCGCAACCTGCTGTTG+GGG | + | chr1_2:61516852-61516871 | Msa0082680:CDS | 65.0% | |
| CCTCCAGGGCCAGGAGAAGA+GGG | - | chr1_2:61516949-61516968 | None:intergenic | 65.0% | |
| TCCTCCAGGGCCAGGAGAAG+AGG | - | chr1_2:61516950-61516969 | None:intergenic | 65.0% | |
| !! | TCGGTGGTGCTGCAACCGAG+TGG | + | chr1_2:61517853-61517872 | Msa0082680:intron | 65.0% |
| GGGGACTACCCGGAGAGGCT+TGG | + | chr1_2:61516059-61516078 | Msa0082680:CDS | 70.0% | |
| CCAACAGCAGGTTGCGCGCC+AGG | - | chr1_2:61516853-61516872 | None:intergenic | 70.0% | |
| CCTGGCGCGCAACCTGCTGT+TGG | + | chr1_2:61516850-61516869 | Msa0082680:CDS | 70.0% | |
| GGGCCAGGAGAAGAGGGCAG+AGG | - | chr1_2:61516943-61516962 | None:intergenic | 70.0% | |
| CTGCCCTCTTCTCCTGGCCC+TGG | + | chr1_2:61516943-61516962 | Msa0082680:CDS | 70.0% | |
| CCCTCTTCTCCTGGCCCTGG+AGG | + | chr1_2:61516946-61516965 | Msa0082680:CDS | 70.0% | |
| CGTGCAGCAACCTGGTCCCG+TGG | - | chr1_2:61517081-61517100 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 61514954 | 61519960 | 61514954 | ID=Msa0082680;Name=Msa0082680 |
| chr1_2 | mRNA | 61514954 | 61519960 | 61514954 | ID=Msa0082680-mRNA-1;Parent=Msa0082680;Name=Msa0082680-mRNA-1;_AED=0.20;_eAED=0.20;_QI=288|1|1|1|0.85|0.75|8|355|473 |
| chr1_2 | exon | 61514954 | 61515028 | 61514954 | ID=Msa0082680-mRNA-1:exon:20355;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61515051 | 61515360 | 61515051 | ID=Msa0082680-mRNA-1:exon:20356;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61515469 | 61515620 | 61515469 | ID=Msa0082680-mRNA-1:exon:20357;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61516035 | 61516097 | 61516035 | ID=Msa0082680-mRNA-1:exon:20358;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61516206 | 61516325 | 61516206 | ID=Msa0082680-mRNA-1:exon:20359;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61516420 | 61516713 | 61516420 | ID=Msa0082680-mRNA-1:exon:20360;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61516826 | 61517137 | 61516826 | ID=Msa0082680-mRNA-1:exon:20361;Parent=Msa0082680-mRNA-1 |
| chr1_2 | exon | 61519222 | 61519960 | 61519222 | ID=Msa0082680-mRNA-1:exon:20362;Parent=Msa0082680-mRNA-1 |
| chr1_2 | five_prime_UTR | 61514954 | 61515028 | 61514954 | ID=Msa0082680-mRNA-1:five_prime_utr;Parent=Msa0082680-mRNA-1 |
| chr1_2 | five_prime_UTR | 61515051 | 61515263 | 61515051 | ID=Msa0082680-mRNA-1:five_prime_utr;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61515264 | 61515360 | 61515264 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61515469 | 61515620 | 61515469 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61516035 | 61516097 | 61516035 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61516206 | 61516325 | 61516206 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61516420 | 61516713 | 61516420 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61516826 | 61517137 | 61516826 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | CDS | 61519222 | 61519605 | 61519222 | ID=Msa0082680-mRNA-1:cds;Parent=Msa0082680-mRNA-1 |
| chr1_2 | three_prime_UTR | 61519606 | 61519960 | 61519606 | ID=Msa0082680-mRNA-1:three_prime_utr;Parent=Msa0082680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
