AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1114410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114410 MtrunA17_Chr7g0257031 92.628 312 21 1 1 312 1 310 0.0 513
Msa1114410 MtrunA17_Chr7g0256981 77.532 316 65 4 1 312 1 314 2.74e-155 436
Msa1114410 MtrunA17_Chr7g0257011 63.462 312 88 7 1 312 1 286 8.36e-123 353
Msa1114410 MtrunA17_Chr7g0256971 71.600 250 64 3 35 282 3 247 9.17e-118 340
Msa1114410 MtrunA17_Chr1g0172581 44.910 167 81 5 65 231 1 156 3.20e-35 125
Msa1114410 MtrunA17_Chr3g0085991 31.356 236 127 6 26 247 24 238 3.99e-30 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114410 AT5G03990.1 40.838 191 90 3 1 171 1 188 2.16e-40 143
Msa1114410 AT3G51940.1 39.286 112 67 1 26 136 20 131 8.60e-24 101
Msa1114410 AT3G51940.2 42.424 99 56 1 39 136 37 135 2.75e-23 99.8
Msa1114410 AT5G03990.2 48.352 91 44 1 65 155 1 88 1.77e-20 88.6

Find 184 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTTTGGAAGGTGATTT+TGG 0.160540 7_3:-61231337 Msa1114410:three_prime_UTR
TGTTGATTCTGAACTTTATT+TGG 0.166699 7_3:-61236737 Msa1114410:CDS
AATTGTGAACTTGATCAATT+TGG 0.188766 7_3:-61231980 Msa1114410:three_prime_UTR
TTACACTGCAGTCTTGTAAT+TGG 0.206384 7_3:+61230916 None:intergenic
CATCCCAGAGCAGCATAATT+TGG 0.225014 7_3:+61236550 None:intergenic
AGAGCGTTAAAATTTAATAT+TGG 0.230109 7_3:+61232100 None:intergenic
CTTTCAGGTTGAGGGTATTA+TGG 0.237414 7_3:-61231431 Msa1114410:intron
GAAATAGTGGGAGAGGAAAT+TGG 0.249350 7_3:-61236360 Msa1114410:CDS
TCCTCTTCTGGTCTTGGATT+GGG 0.249489 7_3:-61236625 Msa1114410:CDS
GAGGGGAAAATTTGCTTATA+AGG 0.264683 7_3:-61236197 Msa1114410:CDS
AATCAGTCCTCTTCTGGTCT+TGG 0.266278 7_3:-61236631 Msa1114410:CDS
TGATTCTGGAAATGGATAAT+TGG 0.273700 7_3:-61237969 Msa1114410:exon
AAACCTGCTTATCTATTTGT+AGG 0.277089 7_3:-61230975 Msa1114410:three_prime_UTR
GAGCGTTAAAATTTAATATT+GGG 0.281130 7_3:+61232101 None:intergenic
TGCATCCCAAAGTGGTAAAC+TGG 0.283430 7_3:-61236891 Msa1114410:CDS
CTCTTGAATCAGTCCTCTTC+TGG 0.284774 7_3:-61236637 Msa1114410:CDS
GGAGGAAGAGGAGGAGGTGG+GGG 0.291481 7_3:-61236223 Msa1114410:CDS
AATGGAGGAAGAGGAGGAGG+TGG 0.306932 7_3:-61236226 Msa1114410:CDS
TAGATTAGTCCAAAAGCATT+TGG 0.307937 7_3:-61231758 Msa1114410:three_prime_UTR
AGATTAGTCCAAAAGCATTT+GGG 0.322615 7_3:-61231757 Msa1114410:three_prime_UTR
ACATATACTAAGAGAAAATA+AGG 0.322979 7_3:+61230882 None:intergenic
TCGTCCCAGTTTACCACTTT+GGG 0.328360 7_3:+61236886 None:intergenic
AAAGAATATGGATGGCAAAA+TGG 0.329913 7_3:-61236454 Msa1114410:CDS
AAATAGTGGGAGAGGAAATT+GGG 0.332117 7_3:-61236359 Msa1114410:CDS
AGGACTCCTGTCTGATTATC+TGG 0.337619 7_3:+61232179 None:intergenic
TGACCCTCTAGCAGCTTCAT+AGG 0.340644 7_3:+61236115 None:intergenic
GAACATGCTGCAAAAGAATA+TGG 0.344072 7_3:-61236466 Msa1114410:CDS
GGCCAAATCGGTATCAAGTT+TGG 0.345618 7_3:-61231350 Msa1114410:three_prime_UTR
TTGAATGTTATAGGAACTAT+TGG 0.346954 7_3:-61233932 Msa1114410:intron
CGCCCCAACATAGAAGAAAA+AGG 0.348181 7_3:-61236691 Msa1114410:CDS
GATGATGGTTACTGATCCTT+TGG 0.349954 7_3:+61237938 None:intergenic
GTCCTCTTCTGGTCTTGGAT+TGG 0.351125 7_3:-61236626 Msa1114410:CDS
TTCCAAACTTGATACCGATT+TGG 0.351407 7_3:+61231348 None:intergenic
AAATTGATCAAGTTCACAAT+TGG 0.357503 7_3:+61231982 None:intergenic
GCAAACTGCATTGAAGTTAC+TGG 0.358277 7_3:-61231039 Msa1114410:three_prime_UTR
TGGAGGAAGAGGAGGAGGTG+GGG 0.358688 7_3:-61236224 Msa1114410:CDS
AAGGAGCTTAACTAGTGGTT+TGG 0.361559 7_3:-61233903 Msa1114410:three_prime_UTR
AGAACCGGAGGTCGTTGATT+TGG 0.373138 7_3:-61231312 Msa1114410:three_prime_UTR
GGATTGGGACCTACTGGATG+GGG 0.378858 7_3:-61236610 Msa1114410:CDS
CCTTTCACTTGTGGAGTCAA+TGG 0.382583 7_3:-61235297 Msa1114410:three_prime_UTR
AATAGAGGAGGAAGAAGAAA+TGG 0.384129 7_3:-61236244 Msa1114410:CDS
TATAACGGAAAACCACCTTT+AGG 0.390153 7_3:-61237883 Msa1114410:intron
TGAACCAAATTATGCTGCTC+TGG 0.390673 7_3:-61236554 Msa1114410:CDS
ACATCATCTATGTAAATGTT+AGG 0.394819 7_3:+61236775 None:intergenic
TATTGATTATGATGCTTCAT+TGG 0.398217 7_3:-61232348 Msa1114410:three_prime_UTR
GATTGGGACCTACTGGATGG+GGG 0.403956 7_3:-61236609 Msa1114410:CDS
TGCTGAACATTTGGTGATCA+TGG 0.405689 7_3:-61235234 Msa1114410:three_prime_UTR
AAAATTCTAGACACTTTAAG+AGG 0.406500 7_3:-61232075 Msa1114410:three_prime_UTR
GGAGAGGAAATTGGGGAACA+TGG 0.411161 7_3:-61236351 Msa1114410:CDS
ATGGAGGAAGAGGAGGAGGT+GGG 0.413896 7_3:-61236225 Msa1114410:CDS
TCATGATTGTGCTGAACATT+TGG 0.414310 7_3:-61235243 Msa1114410:three_prime_UTR
GGAAGAAGAAATGGAGGAAG+AGG 0.415987 7_3:-61236235 Msa1114410:CDS
GTATTGAATGATAAATATAA+TGG 0.415992 7_3:+61231799 None:intergenic
GAGGAAACTAACTTTATTGA+AGG 0.419178 7_3:-61231260 Msa1114410:three_prime_UTR
GGTCTTGGATTGGGACCTAC+TGG 0.427547 7_3:-61236616 Msa1114410:CDS
AAATGATGACTCAATCAGTA+TGG 0.427788 7_3:-61231928 Msa1114410:three_prime_UTR
AAATGGTCAGAATGATTCTC+AGG 0.431182 7_3:-61236437 Msa1114410:CDS
ATCTGGTGCTTTCAGGTTGA+GGG 0.431735 7_3:-61231439 Msa1114410:intron
TTTGGAGTTGCTATGAATCA+AGG 0.432097 7_3:-61231962 Msa1114410:three_prime_UTR
GTCGTCCCAGTTTACCACTT+TGG 0.436251 7_3:+61236885 None:intergenic
AAAATAATGAAACAAACTCT+TGG 0.438543 7_3:-61236510 Msa1114410:CDS
GGTTTCCAACAGTGCCTTTG+TGG 0.441064 7_3:-61236987 Msa1114410:CDS
TTGGATTGGGACCTACTGGA+TGG 0.441158 7_3:-61236612 Msa1114410:CDS
AAGTATCAAGGAAGAAATAG+TGG 0.441466 7_3:-61236373 Msa1114410:CDS
TGGATTGGGACCTACTGGAT+GGG 0.442806 7_3:-61236611 Msa1114410:CDS
TTGAGAATATGATTGCAGTT+AGG 0.449399 7_3:+61231085 None:intergenic
ATAGATAAGCAGGTTTCAAA+TGG 0.457100 7_3:+61230982 None:intergenic
TTTCCTACAAATAGATAAGC+AGG 0.457340 7_3:+61230972 None:intergenic
TCTAATGCACTCTCTACATC+AGG 0.462195 7_3:+61235320 None:intergenic
CTTCGGTGGGCTCAGTTCCA+TGG 0.462514 7_3:-61236948 Msa1114410:CDS
GGATATAAGTTATGTTATCT+AGG 0.463348 7_3:-61236074 Msa1114410:intron
CTTTCACTTGTGGAGTCAAT+GGG 0.464147 7_3:-61235296 Msa1114410:three_prime_UTR
AGAAATGGAGGAAGAGGAGG+AGG 0.467887 7_3:-61236229 Msa1114410:CDS
CTGAGATCAACAACATTCCC+TGG 0.470295 7_3:-61236816 Msa1114410:CDS
AATTGATCAAGTTCACAATT+GGG 0.476433 7_3:+61231983 None:intergenic
AAATAATGAAACAAACTCTT+GGG 0.477297 7_3:-61236509 Msa1114410:CDS
AAAGACTGAACTGGCCAAAT+CGG 0.478619 7_3:-61231362 Msa1114410:three_prime_UTR
TCTATGTAAATGTTAGGATC+AGG 0.480083 7_3:+61236781 None:intergenic
TTCTGAACTTTATTTGGATG+TGG 0.480333 7_3:-61236731 Msa1114410:CDS
GGAAATTGGGGAACATGGGA+TGG 0.480974 7_3:-61236346 Msa1114410:CDS
AGATCCTCCATGGACATTTG+TGG 0.481453 7_3:+61231111 None:intergenic
ATAATTTCCATAAACTGATA+AGG 0.486430 7_3:+61232273 None:intergenic
TGCATTAGACCTTTCACTTG+TGG 0.489679 7_3:-61235306 Msa1114410:three_prime_UTR
CAAATTATGCTGCTCTGGGA+TGG 0.490209 7_3:-61236549 Msa1114410:CDS
GTTGATTTGGCTTGTGAACA+TGG 0.491255 7_3:-61231299 Msa1114410:three_prime_UTR
GGTGATCAAAACTGAAGATA+AGG 0.491687 7_3:-61231651 Msa1114410:three_prime_UTR
AGAAAGAAAACAACATGTCT+TGG 0.492809 7_3:-61236312 Msa1114410:CDS
GGTTGATACATTAACAAAAG+TGG 0.495995 7_3:-61235213 Msa1114410:three_prime_UTR
TATACCAGCACTGGCAGCAA+TGG 0.501370 7_3:-61231386 Msa1114410:three_prime_UTR
AGAGGAGGAAGAAGAAATGG+AGG 0.503196 7_3:-61236241 Msa1114410:CDS
GTTTCCAACAGTGCCTTTGT+GGG 0.503784 7_3:-61236986 Msa1114410:CDS
CAAGGAAGAAATAGTGGGAG+AGG 0.507156 7_3:-61236367 Msa1114410:CDS
CTCCATGGACATTTGTGGAC+GGG 0.508645 7_3:+61231116 None:intergenic
AGCAATGGAAAAGACTGAAC+TGG 0.509467 7_3:-61231371 Msa1114410:three_prime_UTR
TATATGTGGAAATATGTCTC+AGG 0.509832 7_3:-61232318 Msa1114410:three_prime_UTR
CAGTTTGCTCATCTACAGAA+TGG 0.510267 7_3:+61231054 None:intergenic
ATTGGGACCTACTGGATGGG+GGG 0.510955 7_3:-61236608 Msa1114410:CDS
ATCAGGCAATGGTATGTCCC+AGG 0.512479 7_3:+61236798 None:intergenic
AGAAGAAATGGAGGAAGAGG+AGG 0.513878 7_3:-61236232 Msa1114410:CDS
GCAGCATAATTTGGTTCAGA+AGG 0.514407 7_3:+61236559 None:intergenic
AATGAGTATCAGATGAATAG+AGG 0.514889 7_3:-61236259 Msa1114410:CDS
TCCTCCTTCTCATCCTATAA+CGG 0.515407 7_3:-61237898 Msa1114410:CDS
AATCAGAGGGAGCGATATGC+TGG 0.516052 7_3:-61236409 Msa1114410:CDS
CCATCATCAAGTGGGTCAGT+GGG 0.517302 7_3:-61237923 Msa1114410:CDS
CCCACTGACCCACTTGATGA+TGG 0.517715 7_3:+61237923 None:intergenic
AGGAAACTAACTTTATTGAA+GGG 0.519973 7_3:-61231259 Msa1114410:three_prime_UTR
AATCATGATTTGAGATGAGC+GGG 0.521687 7_3:+61235258 None:intergenic
GGAGAGGCGGCTGTGACTCT+AGG 0.522716 7_3:-61236670 Msa1114410:CDS
AAATTATGCTGCTCTGGGAT+GGG 0.527002 7_3:-61236548 Msa1114410:CDS
GAGAGGAAATTGGGGAACAT+GGG 0.531170 7_3:-61236350 Msa1114410:CDS
CAAGAGGAAAGATTAAGAAA+AGG 0.533714 7_3:-61232376 Msa1114410:three_prime_UTR
GACTATTAATGTACATATGT+AGG 0.536358 7_3:+61232159 None:intergenic
TCTTTCCTCTTGGATGACTG+TGG 0.539172 7_3:+61232387 None:intergenic
GTCAGAATGATTCTCAGGGA+TGG 0.540162 7_3:-61236432 Msa1114410:CDS
GGTTCCTCTAGAACACTTTG+TGG 0.551877 7_3:+61233866 None:intergenic
GAACCAAATTATGCTGCTCT+GGG 0.563912 7_3:-61236553 Msa1114410:CDS
CAAGCCAAATCAACGACCTC+CGG 0.564412 7_3:+61231308 None:intergenic
GACTTGTATAACAAGTATCA+AGG 0.564906 7_3:-61236385 Msa1114410:CDS
TAAAGGAACTCACAATCTTG+TGG 0.566067 7_3:+61233842 None:intergenic
ACCATCATCAAGTGGGTCAG+TGG 0.567874 7_3:-61237924 Msa1114410:CDS
GGAAACTAACTTTATTGAAG+GGG 0.567917 7_3:-61231258 Msa1114410:three_prime_UTR
TTCCCGTCCACAAATGTCCA+TGG 0.570370 7_3:-61231118 Msa1114410:three_prime_UTR
ATCTTCATTTACCATGCACT+AGG 0.571296 7_3:+61236166 None:intergenic
TGGATCTGTAGACGTGGTTG+TGG 0.571892 7_3:-61235193 Msa1114410:three_prime_UTR
TCTTCTATTAGCTTTCGCCA+TGG 0.571899 7_3:+61236931 None:intergenic
TCCCAATCCAAGACCAGAAG+AGG 0.573717 7_3:+61236624 None:intergenic
AATGCTGTGGAGTGCAAGCA+AGG 0.582656 7_3:-61236141 Msa1114410:three_prime_UTR
AAGTTACCAGATAATCAGAC+AGG 0.584540 7_3:-61232185 Msa1114410:three_prime_UTR
CATGATGATGATTTGAAACA+CGG 0.585023 7_3:+61238135 None:intergenic
TGTACATTAATAGTCTTCAC+AGG 0.586909 7_3:-61232151 Msa1114410:three_prime_UTR
GATTAGTCCAAAAGCATTTG+GGG 0.587112 7_3:-61231756 Msa1114410:three_prime_UTR
AAGAACCATGGATATCATCA+TGG 0.588202 7_3:-61236286 Msa1114410:CDS
AATAGTGGGAGAGGAAATTG+GGG 0.595211 7_3:-61236358 Msa1114410:CDS
TAGGAACTATTGGAAGGAGA+AGG 0.595461 7_3:-61233922 Msa1114410:three_prime_UTR
ATGCTGCAAAAGAATATGGA+TGG 0.597894 7_3:-61236462 Msa1114410:CDS
TAGTGCCATGATGATATCCA+TGG 0.599866 7_3:+61236281 None:intergenic
ATGTTATAGGAACTATTGGA+AGG 0.600671 7_3:-61233928 Msa1114410:intron
ATTCTCAGGGATGGAATCAG+AGG 0.601746 7_3:-61236423 Msa1114410:CDS
TGGACTCATTATTAAAGATG+AGG 0.604851 7_3:-61231279 Msa1114410:three_prime_UTR
CAATCATGATTTGAGATGAG+CGG 0.605123 7_3:+61235257 None:intergenic
GAGTATCAGATGAATAGAGG+AGG 0.605987 7_3:-61236256 Msa1114410:CDS
CCATTGACTCCACAAGTGAA+AGG 0.606787 7_3:+61235297 None:intergenic
GATCAGTAACCATCATCAAG+TGG 0.608162 7_3:-61237932 Msa1114410:CDS
TAACTGCAATCATATTCTCA+AGG 0.609724 7_3:-61231083 Msa1114410:three_prime_UTR
GCATCCCAAAGTGGTAAACT+GGG 0.611168 7_3:-61236890 Msa1114410:CDS
CCTCCATGGACATTTGTGGA+CGG 0.616617 7_3:+61231115 None:intergenic
AGTTAGGCTTAGATCCTCCA+TGG 0.617357 7_3:+61231101 None:intergenic
CAAAAGTGGATCTGTAGACG+TGG 0.617423 7_3:-61235199 Msa1114410:three_prime_UTR
ATCAGTAACCATCATCAAGT+GGG 0.619741 7_3:-61237931 Msa1114410:CDS
CAATACTGTCTCACGTACAC+AGG 0.620069 7_3:-61231782 Msa1114410:three_prime_UTR
AAACCTATGAAGCTGCTAGA+GGG 0.620303 7_3:-61236118 Msa1114410:three_prime_UTR
GAAAGCTAATAGAAGACAAG+AGG 0.621891 7_3:-61236924 Msa1114410:CDS
AGTATCAAGGAAGAAATAGT+GGG 0.622344 7_3:-61236372 Msa1114410:CDS
GGACGACTCTGCTGTCAAAG+AGG 0.623703 7_3:-61236869 Msa1114410:CDS
AAATTCTAGACACTTTAAGA+GGG 0.624707 7_3:-61232074 Msa1114410:three_prime_UTR
GGATGTGGAAATAGAAGCAG+AGG 0.625331 7_3:-61236716 Msa1114410:CDS
TGAGATCAACAACATTCCCT+GGG 0.626226 7_3:-61236815 Msa1114410:CDS
AAATCGGTATCAAGTTTGGA+AGG 0.627405 7_3:-61231346 Msa1114410:three_prime_UTR
GAAACCTATGAAGCTGCTAG+AGG 0.627786 7_3:-61236119 Msa1114410:three_prime_UTR
TCCGTTATAGGATGAGAAGG+AGG 0.628511 7_3:+61237897 None:intergenic
TCATTGGTGATGTCTATATG+TGG 0.628680 7_3:-61232332 Msa1114410:three_prime_UTR
AATGGTCAGAATGATTCTCA+GGG 0.628914 7_3:-61236436 Msa1114410:CDS
TGTGCCACAAAGTGTTCTAG+AGG 0.631627 7_3:-61233870 Msa1114410:three_prime_UTR
ATGTCTTGGTCTAAGAACCA+TGG 0.637891 7_3:-61236298 Msa1114410:CDS
CAGAAGAGGACTGATTCAAG+AGG 0.638374 7_3:+61236638 None:intergenic
TTCTCAGGGATGGAATCAGA+GGG 0.642433 7_3:-61236422 Msa1114410:CDS
CATGTATATGCATCCCAAAG+TGG 0.643906 7_3:-61236899 Msa1114410:CDS
TCAGGCAATGGTATGTCCCA+GGG 0.651273 7_3:+61236799 None:intergenic
AGGTTGCTACTCCTAGTGCA+TGG 0.652070 7_3:-61236177 Msa1114410:CDS
ATGGAAGAAGTCACACGTGG+TGG 0.654788 7_3:-61231722 Msa1114410:three_prime_UTR
AGGAACTCACAATCTTGTGG+AGG 0.655548 7_3:+61233845 None:intergenic
ATTAGTCCAAAAGCATTTGG+GGG 0.660428 7_3:-61231755 Msa1114410:three_prime_UTR
TATTATGGTCTGTGTGCAAG+TGG 0.667807 7_3:-61231416 Msa1114410:three_prime_UTR
ATAATTGGAGAAGAAACCAA+AGG 0.669189 7_3:-61237954 Msa1114410:CDS
GGGCGTTACACTAACTAACA+TGG 0.671858 7_3:-61232054 Msa1114410:three_prime_UTR
CATCATCAAGTGGGTCAGTG+GGG 0.675320 7_3:-61237922 Msa1114410:CDS
TCAAAACTGAAGATAAGGCG+AGG 0.683853 7_3:-61231646 Msa1114410:intron
CAGGTCCACAGTCATCCAAG+AGG 0.685142 7_3:-61232392 Msa1114410:three_prime_UTR
TAAATGTTAGGATCAGGCAA+TGG 0.686387 7_3:+61236787 None:intergenic
AGAATGAACGAACCTAAAGG+TGG 0.691864 7_3:+61237871 None:intergenic
AGGAGAAGGAGCTTAACTAG+TGG 0.693930 7_3:-61233908 Msa1114410:three_prime_UTR
CCGTCCACAAATGTCCATGG+AGG 0.723653 7_3:-61231115 Msa1114410:three_prime_UTR
TAAATGAAGATCGAATGCTG+TGG 0.769907 7_3:-61236154 Msa1114410:three_prime_UTR
TTTATGGAAGAAGTCACACG+TGG 0.776921 7_3:-61231725 Msa1114410:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATAAATTTTGGAAAAA+GGG + chr7_3:61230872-61230891 None:intergenic 10.0%
!!! AATTAATAAATTTTGGAAAA+AGG + chr7_3:61230873-61230892 None:intergenic 10.0%
!!! AAGCAAAAATTAATAAATTT+TGG + chr7_3:61230880-61230899 None:intergenic 10.0%
!!! TTACTATATAGATTTTTTTT+CGG + chr7_3:61233124-61233143 None:intergenic 10.0%
!!! TTTCTTTTGATTTTTAATAT+AGG - chr7_3:61233414-61233433 Msa1114410:intron 10.0%
!!! CTATCATTTTTTAAAATTTT+AGG + chr7_3:61234222-61234241 None:intergenic 10.0%
!!! AAAATTTTAAAAAATGATAG+AGG - chr7_3:61234222-61234241 Msa1114410:intron 10.0%
!! TATAACTAAATAATTTATTG+AGG - chr7_3:61237343-61237362 Msa1114410:intron 10.0%
!!! TGAAAAAGTTTTATTGAAAA+CGG + chr7_3:61230919-61230938 None:intergenic 15.0%
!!! GTTTTTTGGTTTTAAAAATT+GGG - chr7_3:61231316-61231335 Msa1114410:three_prime_UTR 15.0%
!!! TTTTTTGGTTTTAAAAATTG+GGG - chr7_3:61231317-61231336 Msa1114410:three_prime_UTR 15.0%
!!! ATTGATTCTATTTATTCTTT+TGG - chr7_3:61231911-61231930 Msa1114410:three_prime_UTR 15.0%
!! TGATGTTATATAAGAATAAT+GGG - chr7_3:61232894-61232913 Msa1114410:intron 15.0%
!!! TACTATATAGATTTTTTTTC+GGG + chr7_3:61233123-61233142 None:intergenic 15.0%
!! TAAAATAATTACTGATATGT+TGG + chr7_3:61233180-61233199 None:intergenic 15.0%
!!! ATAAATTATGTTCATTTTGT+TGG - chr7_3:61233574-61233593 Msa1114410:intron 15.0%
!! AAGAAATATATCTTGAAATA+TGG - chr7_3:61233982-61234001 Msa1114410:intron 15.0%
!! ATATATTCTCATAGATAATT+CGG + chr7_3:61234445-61234464 None:intergenic 15.0%
!!! TTGGAAATTTGTTAAATATT+TGG - chr7_3:61235367-61235386 Msa1114410:intron 15.0%
!! TAGAATAATAGATTATGATT+TGG - chr7_3:61235578-61235597 Msa1114410:intron 15.0%
!! ATGAATAAATATGCAAATAT+CGG - chr7_3:61235744-61235763 Msa1114410:intron 15.0%
!!! TAATGTAAATTACACTTTTA+AGG - chr7_3:61235824-61235843 Msa1114410:intron 15.0%
!!! TTAATTGATTTATTGAATTG+TGG - chr7_3:61236100-61236119 Msa1114410:three_prime_UTR 15.0%
!! TGAAAAATAATAAATGGAAT+GGG + chr7_3:61236524-61236543 None:intergenic 15.0%
!! GTATTGAATGATAAATATAA+TGG + chr7_3:61237138-61237157 None:intergenic 15.0%
!! TGCAACAAAACAAATTTAAA+AGG + chr7_3:61231143-61231162 None:intergenic 20.0%
!! TTAGAATTGGTAAATATATC+AGG - chr7_3:61231185-61231204 Msa1114410:three_prime_UTR 20.0%
!!! GGTTTTTTGGTTTTAAAAAT+TGG - chr7_3:61231315-61231334 Msa1114410:three_prime_UTR 20.0%
!! ATAAGCAATTTAATGACATA+GGG + chr7_3:61231514-61231533 None:intergenic 20.0%
!! AATAAGCAATTTAATGACAT+AGG + chr7_3:61231515-61231534 None:intergenic 20.0%
!!! AGAATCAATTGATAGTTTAA+GGG + chr7_3:61231900-61231919 None:intergenic 20.0%
!!! TAGAATCAATTGATAGTTTA+AGG + chr7_3:61231901-61231920 None:intergenic 20.0%
!!! TTGTTTCATTATTTTCATGT+TGG + chr7_3:61232419-61232438 None:intergenic 20.0%
!! AAAATAATGAAACAAACTCT+TGG - chr7_3:61232424-61232443 Msa1114410:intron 20.0%
!! AAATAATGAAACAAACTCTT+GGG - chr7_3:61232425-61232444 Msa1114410:intron 20.0%
!! GTGATGTTATATAAGAATAA+TGG - chr7_3:61232893-61232912 Msa1114410:intron 20.0%
!! TATATCAATAAGAACTCATT+AGG + chr7_3:61233149-61233168 None:intergenic 20.0%
!!! ACATAATTTATTAGTTTGAC+AGG + chr7_3:61233565-61233584 None:intergenic 20.0%
!! TACGATTAAGAAACAAATAT+TGG + chr7_3:61233954-61233973 None:intergenic 20.0%
!!! AGTATCTTAGATGATATTTT+AGG + chr7_3:61234016-61234035 None:intergenic 20.0%
!! TATTAACTGTTAATATACCT+TGG + chr7_3:61234076-61234095 None:intergenic 20.0%
!!! TCTTCCTTTAAAAAAATCTT+TGG + chr7_3:61234498-61234517 None:intergenic 20.0%
!!! TTAACTTGTTTGAATGTTAT+AGG - chr7_3:61234993-61235012 Msa1114410:intron 20.0%
!! TATCAATCTAATAGCATAAT+TGG + chr7_3:61235145-61235164 None:intergenic 20.0%
!!! ATTCTAGAATATATTAGCAA+GGG + chr7_3:61235224-61235243 None:intergenic 20.0%
!!! AATTCTAGAATATATTAGCA+AGG + chr7_3:61235225-61235244 None:intergenic 20.0%
!! AAAAACAATGTGTATGATTT+CGG - chr7_3:61235330-61235349 Msa1114410:three_prime_UTR 20.0%
!! TTTAACAAATTTCCAATTTC+CGG + chr7_3:61235363-61235382 None:intergenic 20.0%
!! TATTAATACACATAGCAATA+TGG + chr7_3:61235528-61235547 None:intergenic 20.0%
!!! TATGTTGATAAATATGCTTA+TGG - chr7_3:61235674-61235693 Msa1114410:intron 20.0%
!!! ACACTTTTAAGGTAATATAA+TGG - chr7_3:61235835-61235854 Msa1114410:intron 20.0%
!! CTACCATAATGTATATATAT+TGG - chr7_3:61235929-61235948 Msa1114410:intron 20.0%
!! ACACCAATATATATACATTA+TGG + chr7_3:61235935-61235954 None:intergenic 20.0%
!!! AAATATTCACTTCTCTAAAA+TGG + chr7_3:61236025-61236044 None:intergenic 20.0%
!!! TTAATTTTACGAATAAACTC+AGG + chr7_3:61236298-61236317 None:intergenic 20.0%
!! TTAAGTTATGATATGATTAC+AGG - chr7_3:61236383-61236402 Msa1114410:CDS 20.0%
!! CTGAAAAATAATAAATGGAA+TGG + chr7_3:61236525-61236544 None:intergenic 20.0%
!!! CATTCCATTTATTATTTTTC+AGG - chr7_3:61236523-61236542 Msa1114410:CDS 20.0%
!! ATAATTTCCATAAACTGATA+AGG + chr7_3:61236664-61236683 None:intergenic 20.0%
!! GAGCGTTAAAATTTAATATT+GGG + chr7_3:61236836-61236855 None:intergenic 20.0%
!!! AGAGCGTTAAAATTTAATAT+TGG + chr7_3:61236837-61236856 None:intergenic 20.0%
!!! TTCAACAATTTTATCATTTG+AGG - chr7_3:61236914-61236933 Msa1114410:CDS 20.0%
!! ATAACAAAAACTAAGAGTTT+GGG + chr7_3:61237049-61237068 None:intergenic 20.0%
!!! TATATATTTGAAATACCATC+AGG - chr7_3:61237311-61237330 Msa1114410:intron 20.0%
!! GAAAAGAATTAAAACAAGAT+TGG + chr7_3:61237463-61237482 None:intergenic 20.0%
!!! AAGACGTTATCTTTAAAAAT+TGG - chr7_3:61237778-61237797 Msa1114410:intron 20.0%
!!! AGACGTTATCTTTAAAAATT+GGG - chr7_3:61237779-61237798 Msa1114410:intron 20.0%
!! ACATATACTAAGAGAAAATA+AGG + chr7_3:61238055-61238074 None:intergenic 20.0%
!!! TTTGATTTTTGTTTGACTAA+GGG + chr7_3:61238079-61238098 None:intergenic 20.0%
!! TCAAGAAAAATTGATTAACT+TGG + chr7_3:61238124-61238143 None:intergenic 20.0%
!!! ACTTTTTCAATTATCTCTTC+TGG - chr7_3:61230930-61230949 Msa1114410:three_prime_UTR 25.0%
!!! CTTTTTCAATTATCTCTTCT+GGG - chr7_3:61230931-61230950 Msa1114410:three_prime_UTR 25.0%
!!! TTATCTTTTGATTCTGGAAA+TGG - chr7_3:61230957-61230976 Msa1114410:three_prime_UTR 25.0%
!!! TGATCACTTTACTTTTGAAT+TGG - chr7_3:61231283-61231302 Msa1114410:three_prime_UTR 25.0%
! AATATCTAGAAATCATCTCT+TGG - chr7_3:61231469-61231488 Msa1114410:intron 25.0%
!!! ACATGAATCTGTTTTGATTA+TGG - chr7_3:61231567-61231586 Msa1114410:intron 25.0%
!! ATCTGAAAATGTCTTGATTT+TGG - chr7_3:61231599-61231618 Msa1114410:intron 25.0%
! ACATCATCTATGTAAATGTT+AGG + chr7_3:61232162-61232181 None:intergenic 25.0%
!!! TGTTGATTCTGAACTTTATT+TGG - chr7_3:61232197-61232216 Msa1114410:three_prime_UTR 25.0%
! GGATATAAGTTATGTTATCT+AGG - chr7_3:61232860-61232879 Msa1114410:intron 25.0%
! TAATATCAGTACTAATGCAT+TGG + chr7_3:61233006-61233025 None:intergenic 25.0%
! ATCAAATCAATAACAGTTTC+AGG + chr7_3:61233895-61233914 None:intergenic 25.0%
!!! GAAACTGTTATTGATTTGAT+AGG - chr7_3:61233895-61233914 Msa1114410:three_prime_UTR 25.0%
!! TAGATAAGTAACTAACTTGT+TGG + chr7_3:61234330-61234349 None:intergenic 25.0%
! AAATAGCTGACATAGATAAA+TGG + chr7_3:61234420-61234439 None:intergenic 25.0%
! TATGAGAATATATTGAACCA+AGG - chr7_3:61234452-61234471 Msa1114410:intron 25.0%
! ATGAGAATATATTGAACCAA+GGG - chr7_3:61234453-61234472 Msa1114410:intron 25.0%
!! CCTTTAAAAAAATCTTTGGA+TGG + chr7_3:61234494-61234513 None:intergenic 25.0%
!!! CCATCCAAAGATTTTTTTAA+AGG - chr7_3:61234491-61234510 Msa1114410:intron 25.0%
! TTGAATGTTATAGGAACTAT+TGG - chr7_3:61235002-61235021 Msa1114410:intron 25.0%
!! AAATCATGATTTTGAGCTTT+AGG - chr7_3:61235164-61235183 Msa1114410:intron 25.0%
!!! AATATATTAGCAAGGGTATT+AGG + chr7_3:61235217-61235236 None:intergenic 25.0%
! ATTCTATACTAACATAAGCA+TGG + chr7_3:61235265-61235284 None:intergenic 25.0%
! TAGTATAGAATAGAAGTTGA+AGG - chr7_3:61235274-61235293 Msa1114410:three_prime_UTR 25.0%
! GAAGTTGAAGGAAAATTATT+AGG - chr7_3:61235286-61235305 Msa1114410:three_prime_UTR 25.0%
!!! GATTGAACTTTTCATTTTTC+CGG - chr7_3:61235458-61235477 Msa1114410:intron 25.0%
!! GAGGTTCTTATAACAATTTT+CGG + chr7_3:61235492-61235511 None:intergenic 25.0%
!!! AGATTATGATTTGGTACATT+AGG - chr7_3:61235587-61235606 Msa1114410:intron 25.0%
!! TATGGTAATGTAGAAATTAG+AGG - chr7_3:61235692-61235711 Msa1114410:intron 25.0%
! AGGATTTACATAACACATTT+CGG + chr7_3:61235898-61235917 None:intergenic 25.0%
! TGGACCTGAAAAATAATAAA+TGG + chr7_3:61236530-61236549 None:intergenic 25.0%
!! TATTGATTATGATGCTTCAT+TGG - chr7_3:61236586-61236605 Msa1114410:CDS 25.0%
!! TTTTAGTCCTTATCAGTTTA+TGG - chr7_3:61236654-61236673 Msa1114410:CDS 25.0%
! GACTATTAATGTACATATGT+AGG + chr7_3:61236778-61236797 None:intergenic 25.0%
! AAAATTCTAGACACTTTAAG+AGG - chr7_3:61236859-61236878 Msa1114410:CDS 25.0%
!! AAATTCTAGACACTTTAAGA+GGG - chr7_3:61236860-61236879 Msa1114410:CDS 25.0%
! AATTGATCAAGTTCACAATT+GGG + chr7_3:61236954-61236973 None:intergenic 25.0%
! AAATTGATCAAGTTCACAAT+TGG + chr7_3:61236955-61236974 None:intergenic 25.0%
! AATTGTGAACTTGATCAATT+TGG - chr7_3:61236954-61236973 Msa1114410:CDS 25.0%
! GATAACAAAAACTAAGAGTT+TGG + chr7_3:61237050-61237069 None:intergenic 25.0%
!!! TTAAAACAAGATTGGTCTTT+GGG + chr7_3:61237455-61237474 None:intergenic 25.0%
!!! ATTAAAACAAGATTGGTCTT+TGG + chr7_3:61237456-61237475 None:intergenic 25.0%
! AGGAAACTAACTTTATTGAA+GGG - chr7_3:61237675-61237694 Msa1114410:intron 25.0%
! TGTGTTCATTAGTCAAAAAA+AGG - chr7_3:61237993-61238012 Msa1114410:five_prime_UTR 25.0%
!!! CTTTGATTTTTGTTTGACTA+AGG + chr7_3:61238080-61238099 None:intergenic 25.0%
! CATGATGATGATTTGAAACA+CGG + chr7_3:61230802-61230821 None:intergenic 30.0%
!! GGGATTTTATCTTTTGATTC+TGG - chr7_3:61230951-61230970 Msa1114410:three_prime_UTR 30.0%
! TGATTCTGGAAATGGATAAT+TGG - chr7_3:61230965-61230984 Msa1114410:three_prime_UTR 30.0%
ATAATTGGAGAAGAAACCAA+AGG - chr7_3:61230980-61230999 Msa1114410:three_prime_UTR 30.0%
! TTCATTCTTCAGTTTTTGCA+TGG - chr7_3:61231078-61231097 Msa1114410:three_prime_UTR 30.0%
TTGTTGCATAGTTGAAAAAG+TGG - chr7_3:61231155-61231174 Msa1114410:three_prime_UTR 30.0%
TGTTGCATAGTTGAAAAAGT+GGG - chr7_3:61231156-61231175 Msa1114410:three_prime_UTR 30.0%
AAGTAAAGTGATCACAATCA+AGG + chr7_3:61231277-61231296 None:intergenic 30.0%
!! TACTTTTGAATTGGTTCAGT+TGG - chr7_3:61231292-61231311 Msa1114410:three_prime_UTR 30.0%
!! ACTTTTGAATTGGTTCAGTT+GGG - chr7_3:61231293-61231312 Msa1114410:three_prime_UTR 30.0%
! AAAATTGGGGTTTTTCCATA+AGG - chr7_3:61231330-61231349 Msa1114410:three_prime_UTR 30.0%
! AAATTGGGGTTTTTCCATAA+GGG - chr7_3:61231331-61231350 Msa1114410:three_prime_UTR 30.0%
TAGTTATCTATCAACCCTTA+TGG + chr7_3:61231348-61231367 None:intergenic 30.0%
TATTACAGAACATAATCAGC+AGG + chr7_3:61231393-61231412 None:intergenic 30.0%
AATAAACATCTCCTTGAACA+TGG + chr7_3:61231625-61231644 None:intergenic 30.0%
ATGTTCAAGGAGATGTTTAT+TGG - chr7_3:61231624-61231643 Msa1114410:intron 30.0%
TTCATTGAATAGCCAAATCT+AGG + chr7_3:61231774-61231793 None:intergenic 30.0%
CATGTGATTATAACATAACG+TGG + chr7_3:61231841-61231860 None:intergenic 30.0%
!!! TCTTTTGGTTCACAGATAAT+AGG - chr7_3:61231926-61231945 Msa1114410:three_prime_UTR 30.0%
ACAATGCAAAAAACAGGTAT+TGG - chr7_3:61232094-61232113 Msa1114410:three_prime_UTR 30.0%
CAATGCAAAAAACAGGTATT+GGG - chr7_3:61232095-61232114 Msa1114410:three_prime_UTR 30.0%
TCTATGTAAATGTTAGGATC+AGG + chr7_3:61232156-61232175 None:intergenic 30.0%
! TTCTGAACTTTATTTGGATG+TGG - chr7_3:61232203-61232222 Msa1114410:three_prime_UTR 30.0%
! TCTCCTTTTTCTTCTATGTT+GGG + chr7_3:61232249-61232268 None:intergenic 30.0%
AAAGAATATGGATGGCAAAA+TGG - chr7_3:61232480-61232499 Msa1114410:intron 30.0%
GACTTGTATAACAAGTATCA+AGG - chr7_3:61232549-61232568 Msa1114410:intron 30.0%
AAGTATCAAGGAAGAAATAG+TGG - chr7_3:61232561-61232580 Msa1114410:intron 30.0%
AGTATCAAGGAAGAAATAGT+GGG - chr7_3:61232562-61232581 Msa1114410:intron 30.0%
AGAAAGAAAACAACATGTCT+TGG - chr7_3:61232622-61232641 Msa1114410:intron 30.0%
AATGAGTATCAGATGAATAG+AGG - chr7_3:61232675-61232694 Msa1114410:intron 30.0%
TAGTTTAAGAAATACCTGTG+TGG - chr7_3:61232969-61232988 Msa1114410:intron 30.0%
TTGAAGTTGTCATCATTTCA+TGG - chr7_3:61233201-61233220 Msa1114410:intron 30.0%
GTCATCATTTCATGGTTAAT+TGG - chr7_3:61233209-61233228 Msa1114410:intron 30.0%
TTACTCAAAAGTGAAGCTTT+GGG - chr7_3:61233232-61233251 Msa1114410:intron 30.0%
! AAAAACTTTTCAGTTGACAC+AGG - chr7_3:61233463-61233482 Msa1114410:intron 30.0%
! ATTATGTTCATTTTGTTGGC+AGG - chr7_3:61233578-61233597 Msa1114410:intron 30.0%
! GGTTGATACATTAACAAAAG+TGG - chr7_3:61233721-61233740 Msa1114410:intron 30.0%
GCACAGAAATTTAACAATGT+TGG + chr7_3:61233821-61233840 None:intergenic 30.0%
TTGTCGTAAGTTTCAAAAGT+AGG - chr7_3:61233842-61233861 Msa1114410:intron 30.0%
TGTCGTAAGTTTCAAAAGTA+GGG - chr7_3:61233843-61233862 Msa1114410:intron 30.0%
ATATTGGTACAATTAGACGT+CGG + chr7_3:61233938-61233957 None:intergenic 30.0%
!!! GATTTTTTGTTAGTGCTAAG+TGG - chr7_3:61234134-61234153 Msa1114410:intron 30.0%
ATAAGAAAGAGAGAAAAGAG+AGG - chr7_3:61234168-61234187 Msa1114410:intron 30.0%
TGTGTTTGAGAAAATGTGAA+TGG + chr7_3:61234544-61234563 None:intergenic 30.0%
TAAGCTTGAATCATGACATT+TGG + chr7_3:61234655-61234674 None:intergenic 30.0%
TCATGATTCAAGCTTAGTAA+TGG - chr7_3:61234659-61234678 Msa1114410:intron 30.0%
ATTGAAGGATTGGAAATATG+AGG + chr7_3:61234761-61234780 None:intergenic 30.0%
! AATTTTGTCTCCAAATCCAT+GGG - chr7_3:61234778-61234797 Msa1114410:intron 30.0%
!! TGCTAGGAATCATGTTTTAA+TGG - chr7_3:61234805-61234824 Msa1114410:intron 30.0%
! GCAATTTTTCCCAAAAATGA+GGG + chr7_3:61234909-61234928 None:intergenic 30.0%
! AGCAATTTTTCCCAAAAATG+AGG + chr7_3:61234910-61234929 None:intergenic 30.0%
!!! GATTTTGAAACATTCTCACA+AGG + chr7_3:61234933-61234952 None:intergenic 30.0%
TCTAGTGAGTATATGTGTTA+TGG - chr7_3:61234958-61234977 Msa1114410:intron 30.0%
CTAGTGAGTATATGTGTTAT+GGG - chr7_3:61234959-61234978 Msa1114410:intron 30.0%
ATGTTATAGGAACTATTGGA+AGG - chr7_3:61235006-61235025 Msa1114410:intron 30.0%
AGGAAAGGTTTACTAACTAA+AGG + chr7_3:61235112-61235131 None:intergenic 30.0%
! AGTTAGTAAACCTTTCCTTT+TGG - chr7_3:61235114-61235133 Msa1114410:intron 30.0%
! GTTAGTAAACCTTTCCTTTT+GGG - chr7_3:61235115-61235134 Msa1114410:intron 30.0%
! GGTTAGTGCTAATATGTTTT+AGG - chr7_3:61235191-61235210 Msa1114410:three_prime_UTR 30.0%
TGAAGGAAAATTATTAGGCA+AGG - chr7_3:61235291-61235310 Msa1114410:three_prime_UTR 30.0%
ATTTGGTATGTTCCTATCTT+TGG - chr7_3:61235384-61235403 Msa1114410:intron 30.0%
TTAAATGAATACACGACCAA+TGG - chr7_3:61235427-61235446 Msa1114410:intron 30.0%
CATAGCAATATGGTAGTATT+TGG + chr7_3:61235518-61235537 None:intergenic 30.0%
!!! ATTTTAGAGTACACTAGCAA+GGG + chr7_3:61235648-61235667 None:intergenic 30.0%
!!! TATTTTAGAGTACACTAGCA+AGG + chr7_3:61235649-61235668 None:intergenic 30.0%
TGGAAATATTACCGGTAATT+AGG - chr7_3:61236248-61236267 Msa1114410:CDS 30.0%
GGAAATATTACCGGTAATTA+GGG - chr7_3:61236249-61236268 Msa1114410:CDS 30.0%
GAAATATTACCGGTAATTAG+GGG - chr7_3:61236250-61236269 Msa1114410:CDS 30.0%
GAATTTATTCCCCTAATTAC+CGG + chr7_3:61236262-61236281 None:intergenic 30.0%
GTAATTAGGGGAATAAATTC+CGG - chr7_3:61236262-61236281 Msa1114410:CDS 30.0%
TAATTAGGGGAATAAATTCC+GGG - chr7_3:61236263-61236282 Msa1114410:CDS 30.0%
! ATTTTACGAATAAACTCAGG+TGG + chr7_3:61236295-61236314 None:intergenic 30.0%
! CTTTTCTTAATCTTTCCTCT+TGG + chr7_3:61236560-61236579 None:intergenic 30.0%
CAAGAGGAAAGATTAAGAAA+AGG - chr7_3:61236558-61236577 Msa1114410:CDS 30.0%
TATATGTGGAAATATGTCTC+AGG - chr7_3:61236616-61236635 Msa1114410:CDS 30.0%
TGTACATTAATAGTCTTCAC+AGG - chr7_3:61236783-61236802 Msa1114410:CDS 30.0%
AAATGATGACTCAATCAGTA+TGG - chr7_3:61237006-61237025 Msa1114410:intron 30.0%
!! TAGATTAGTCCAAAAGCATT+TGG - chr7_3:61237176-61237195 Msa1114410:intron 30.0%
!! AGATTAGTCCAAAAGCATTT+GGG - chr7_3:61237177-61237196 Msa1114410:intron 30.0%
TGGACTCATTATTAAAGATG+AGG - chr7_3:61237655-61237674 Msa1114410:intron 30.0%
GAGGAAACTAACTTTATTGA+AGG - chr7_3:61237674-61237693 Msa1114410:intron 30.0%
GGAAACTAACTTTATTGAAG+GGG - chr7_3:61237676-61237695 Msa1114410:intron 30.0%
!! AGAGATTTTGTGACTAGTTA+TGG - chr7_3:61237748-61237767 Msa1114410:intron 30.0%
TTGAGAATATGATTGCAGTT+AGG + chr7_3:61237852-61237871 None:intergenic 30.0%
TAACTGCAATCATATTCTCA+AGG - chr7_3:61237851-61237870 Msa1114410:intron 30.0%
ATAGATAAGCAGGTTTCAAA+TGG + chr7_3:61237955-61237974 None:intergenic 30.0%
AAACCTGCTTATCTATTTGT+AGG - chr7_3:61237959-61237978 Msa1114410:CDS 30.0%
TTTCCTACAAATAGATAAGC+AGG + chr7_3:61237965-61237984 None:intergenic 30.0%
!!! CGGATTTTAGAACAAGGTTA+TGG + chr7_3:61230837-61230856 None:intergenic 35.0%
AAAAAGGGATAACACAGACA+CGG + chr7_3:61230857-61230876 None:intergenic 35.0%
ATCAGTAACCATCATCAAGT+GGG - chr7_3:61231003-61231022 Msa1114410:three_prime_UTR 35.0%
! TTTTCCGTTATAGGATGAGA+AGG + chr7_3:61231043-61231062 None:intergenic 35.0%
! TAAAGGTGGTTTTCCGTTAT+AGG + chr7_3:61231052-61231071 None:intergenic 35.0%
! TATAACGGAAAACCACCTTT+AGG - chr7_3:61231051-61231070 Msa1114410:three_prime_UTR 35.0%
TGAAGAATGAACGAACCTAA+AGG + chr7_3:61231069-61231088 None:intergenic 35.0%
AAGTGGGTGAATGTTAGAAT+TGG - chr7_3:61231172-61231191 Msa1114410:three_prime_UTR 35.0%
!! CTTTTGAATTGGTTCAGTTG+GGG - chr7_3:61231294-61231313 Msa1114410:three_prime_UTR 35.0%
AACTATGTTTCAGTTTGCGT+TGG - chr7_3:61231363-61231382 Msa1114410:three_prime_UTR 35.0%
AGAATGTAGTTGAAGTAAGC+AGG + chr7_3:61231730-61231749 None:intergenic 35.0%
TGATTATAACATAACGTGGC+TGG + chr7_3:61231837-61231856 None:intergenic 35.0%
GAAAGCTAATAGAAGACAAG+AGG - chr7_3:61232010-61232029 Msa1114410:three_prime_UTR 35.0%
CATTCGACAATGCAAAAAAC+AGG - chr7_3:61232088-61232107 Msa1114410:three_prime_UTR 35.0%
TAAATGTTAGGATCAGGCAA+TGG + chr7_3:61232150-61232169 None:intergenic 35.0%
! CTCCTTTTTCTTCTATGTTG+GGG + chr7_3:61232248-61232267 None:intergenic 35.0%
! CTCTCCTTTTTCTTCTATGT+TGG + chr7_3:61232250-61232269 None:intergenic 35.0%
CAACATAGAAGAAAAAGGAG+AGG - chr7_3:61232248-61232267 Msa1114410:three_prime_UTR 35.0%
! TTCTTTTGCAGCATGTTCAA+CGG + chr7_3:61232466-61232485 None:intergenic 35.0%
GAACATGCTGCAAAAGAATA+TGG - chr7_3:61232468-61232487 Msa1114410:intron 35.0%
ATGCTGCAAAAGAATATGGA+TGG - chr7_3:61232472-61232491 Msa1114410:intron 35.0%
AAATGGTCAGAATGATTCTC+AGG - chr7_3:61232497-61232516 Msa1114410:intron 35.0%
AATGGTCAGAATGATTCTCA+GGG - chr7_3:61232498-61232517 Msa1114410:intron 35.0%
! AAATAGTGGGAGAGGAAATT+GGG - chr7_3:61232575-61232594 Msa1114410:intron 35.0%
AAGAACCATGGATATCATCA+TGG - chr7_3:61232648-61232667 Msa1114410:intron 35.0%
AATAGAGGAGGAAGAAGAAA+TGG - chr7_3:61232690-61232709 Msa1114410:intron 35.0%
! GAGGGGAAAATTTGCTTATA+AGG - chr7_3:61232737-61232756 Msa1114410:intron 35.0%
ATCTTCATTTACCATGCACT+AGG + chr7_3:61232771-61232790 None:intergenic 35.0%
TAAATGAAGATCGAATGCTG+TGG - chr7_3:61232780-61232799 Msa1114410:intron 35.0%
ATATTGTTGCATTCACCTGA+AGG - chr7_3:61232924-61232943 Msa1114410:intron 35.0%
GTACTAATGCATTGGATCAT+CGG + chr7_3:61232998-61233017 None:intergenic 35.0%
GGGTATAAATGTATGCACAA+AGG + chr7_3:61233103-61233122 None:intergenic 35.0%
GTTACTCAAAAGTGAAGCTT+TGG - chr7_3:61233231-61233250 Msa1114410:intron 35.0%
CAAGAAATACTTGCGAAGTA+TGG - chr7_3:61233297-61233316 Msa1114410:intron 35.0%
GCGAAGTATGGAAAATGAAA+CGG - chr7_3:61233309-61233328 Msa1114410:intron 35.0%
AAGTATGGAAAATGAAACGG+AGG - chr7_3:61233312-61233331 Msa1114410:intron 35.0%
! GTTGTAAGCTTTTCCTCATT+TGG - chr7_3:61233337-61233356 Msa1114410:intron 35.0%
AAAGCAGCTAAATGCAGTTT+GGG + chr7_3:61233381-61233400 None:intergenic 35.0%
AAAAGCAGCTAAATGCAGTT+TGG + chr7_3:61233382-61233401 None:intergenic 35.0%
ACACATTCTCCAACAGAAAT+GGG + chr7_3:61233525-61233544 None:intergenic 35.0%
AACACATTCTCCAACAGAAA+TGG + chr7_3:61233526-61233545 None:intergenic 35.0%
! AATCATGATTTGAGATGAGC+GGG + chr7_3:61233679-61233698 None:intergenic 35.0%
! CAATCATGATTTGAGATGAG+CGG + chr7_3:61233680-61233699 None:intergenic 35.0%
TCATGATTGTGCTGAACATT+TGG - chr7_3:61233691-61233710 Msa1114410:intron 35.0%
TATTGAGGATGTAAACGACT+AGG + chr7_3:61233788-61233807 None:intergenic 35.0%
!!! GTTGGTTTTGCTAACTATTG+AGG + chr7_3:61233803-61233822 None:intergenic 35.0%
GATGTGATGACATATTTCCA+AGG - chr7_3:61234056-61234075 Msa1114410:intron 35.0%
GTTAGAGTTTGGTTAGTAGT+TGG + chr7_3:61234365-61234384 None:intergenic 35.0%
GGGATATTACAGTTAGAGTT+TGG + chr7_3:61234376-61234395 None:intergenic 35.0%
! AAATGACAGTGTTGTTAAGC+GGG + chr7_3:61234396-61234415 None:intergenic 35.0%
! CAAATGACAGTGTTGTTAAG+CGG + chr7_3:61234397-61234416 None:intergenic 35.0%
ATATTGAACCAAGGGCAAAA+AGG - chr7_3:61234461-61234480 Msa1114410:intron 35.0%
AGAAAATGTGAATGGAAGTG+TGG + chr7_3:61234536-61234555 None:intergenic 35.0%
TCCTTCTCTAAACTAACCAT+CGG - chr7_3:61234571-61234590 Msa1114410:intron 35.0%
!! TTGGAGTGATTTTGAGAGAT+TGG + chr7_3:61234636-61234655 None:intergenic 35.0%
ATTGGAAATATGAGGAAAGG+GGG + chr7_3:61234753-61234772 None:intergenic 35.0%
GATTGGAAATATGAGGAAAG+GGG + chr7_3:61234754-61234773 None:intergenic 35.0%
GGATTGGAAATATGAGGAAA+GGG + chr7_3:61234755-61234774 None:intergenic 35.0%
AGGATTGGAAATATGAGGAA+AGG + chr7_3:61234756-61234775 None:intergenic 35.0%
TGGAGACAAAATTGAAGGAT+TGG + chr7_3:61234771-61234790 None:intergenic 35.0%
GGATTTGGAGACAAAATTGA+AGG + chr7_3:61234776-61234795 None:intergenic 35.0%
! CAATTTTGTCTCCAAATCCA+TGG - chr7_3:61234777-61234796 Msa1114410:intron 35.0%
!!! CATGTTTTAATGGATACCCA+TGG - chr7_3:61234815-61234834 Msa1114410:intron 35.0%
TTCCCAAAAATGAGGGTTTA+GGG + chr7_3:61234902-61234921 None:intergenic 35.0%
TTTCCCAAAAATGAGGGTTT+AGG + chr7_3:61234903-61234922 None:intergenic 35.0%
TAAAGGAACTCACAATCTTG+TGG + chr7_3:61235095-61235114 None:intergenic 35.0%
!!! TGATTTTGAGCTTTAGGACA+TGG - chr7_3:61235170-61235189 Msa1114410:intron 35.0%
ATGTTCCTATCTTTGGCTAA+CGG - chr7_3:61235391-61235410 Msa1114410:intron 35.0%
! ACAATTTTCGGCTACATATC+CGG + chr7_3:61235480-61235499 None:intergenic 35.0%
ATATGGTAGTATTTGGTTGG+AGG + chr7_3:61235511-61235530 None:intergenic 35.0%
GCAATATGGTAGTATTTGGT+TGG + chr7_3:61235514-61235533 None:intergenic 35.0%
! GCAAATATCGGCTAAAATTC+CGG - chr7_3:61235756-61235775 Msa1114410:intron 35.0%
! TTATGGTAGTTTGCGATTAG+AGG + chr7_3:61235918-61235937 None:intergenic 35.0%
TTAGCCAAGAATATCAGTCA+TGG - chr7_3:61235974-61235993 Msa1114410:intron 35.0%
TAGCCAAGAATATCAGTCAT+GGG - chr7_3:61235975-61235994 Msa1114410:intron 35.0%
! TCTAAAATGGTAGTTTACCC+GGG + chr7_3:61236012-61236031 None:intergenic 35.0%
!! CTCTAAAATGGTAGTTTACC+CGG + chr7_3:61236013-61236032 None:intergenic 35.0%
TTACCGGTAATATTTCCAAC+TGG + chr7_3:61236246-61236265 None:intergenic 35.0%
AATTAGGGGAATAAATTCCG+GGG - chr7_3:61236264-61236283 Msa1114410:CDS 35.0%
ACGATGTATAAACCTCAAAG+AGG - chr7_3:61236409-61236428 Msa1114410:CDS 35.0%
GTCTAAATTCAACCTCTTTG+AGG + chr7_3:61236424-61236443 None:intergenic 35.0%
AAGAGGTTGAATTTAGACAG+AGG - chr7_3:61236426-61236445 Msa1114410:CDS 35.0%
AGAGGTTGAATTTAGACAGA+GGG - chr7_3:61236427-61236446 Msa1114410:CDS 35.0%
!! TCATTGGTGATGTCTATATG+TGG - chr7_3:61236602-61236621 Msa1114410:CDS 35.0%
AAGTTACCAGATAATCAGAC+AGG - chr7_3:61236749-61236768 Msa1114410:CDS 35.0%
! TTTGGAGTTGCTATGAATCA+AGG - chr7_3:61236972-61236991 Msa1114410:CDS 35.0%
!! GATTAGTCCAAAAGCATTTG+GGG - chr7_3:61237178-61237197 Msa1114410:intron 35.0%
!! ATTAGTCCAAAAGCATTTGG+GGG - chr7_3:61237179-61237198 Msa1114410:intron 35.0%
TCGTTTGCGACTTTCAAAAA+TGG - chr7_3:61237262-61237281 Msa1114410:intron 35.0%
GGTGATCAAAACTGAAGATA+AGG - chr7_3:61237283-61237302 Msa1114410:intron 35.0%
TTGAAATACCATCAGGTTTC+AGG - chr7_3:61237318-61237337 Msa1114410:intron 35.0%
TGAAATACCATCAGGTTTCA+GGG - chr7_3:61237319-61237338 Msa1114410:intron 35.0%
GGGAAAGAAAAGGAGAAATT+GGG + chr7_3:61237435-61237454 None:intergenic 35.0%
TGGGAAAGAAAAGGAGAAAT+TGG + chr7_3:61237436-61237455 None:intergenic 35.0%
!! ATTGGTCTTTGGGAAAGAAA+AGG + chr7_3:61237445-61237464 None:intergenic 35.0%
! TTTTCTTCTCTCTTGACATC+TGG - chr7_3:61237478-61237497 Msa1114410:intron 35.0%
GGTAAAAAATATACCAGCAC+TGG - chr7_3:61237539-61237558 Msa1114410:intron 35.0%
! TTCCAAACTTGATACCGATT+TGG + chr7_3:61237589-61237608 None:intergenic 35.0%
AAATCGGTATCAAGTTTGGA+AGG - chr7_3:61237588-61237607 Msa1114410:intron 35.0%
! TCAAGTTTGGAAGGTGATTT+TGG - chr7_3:61237597-61237616 Msa1114410:intron 35.0%
! CAAGTTTGGAAGGTGATTTT+GGG - chr7_3:61237598-61237617 Msa1114410:intron 35.0%
! AGAAGCAGCTGAACTATTTT+TGG - chr7_3:61237715-61237734 Msa1114410:intron 35.0%
! TTACACTGCAGTCTTGTAAT+TGG + chr7_3:61238021-61238040 None:intergenic 35.0%
!!! CAGACACGGATTTTAGAACA+AGG + chr7_3:61230843-61230862 None:intergenic 40.0%
! GATGATGGTTACTGATCCTT+TGG + chr7_3:61230999-61231018 None:intergenic 40.0%
GATCAGTAACCATCATCAAG+TGG - chr7_3:61231002-61231021 Msa1114410:three_prime_UTR 40.0%
TCCTCCTTCTCATCCTATAA+CGG - chr7_3:61231036-61231055 Msa1114410:three_prime_UTR 40.0%
AGAATGAACGAACCTAAAGG+TGG + chr7_3:61231066-61231085 None:intergenic 40.0%
GAATAATTGCTGTCACATGC+AGG - chr7_3:61231215-61231234 Msa1114410:three_prime_UTR 40.0%
!!! TTGGTTCAGTTGGGGTTTTT+TGG - chr7_3:61231302-61231321 Msa1114410:three_prime_UTR 40.0%
! TGTCGTGCTTTGAATTCATG+CGG - chr7_3:61231424-61231443 Msa1114410:three_prime_UTR 40.0%
!! CTTGATTTTGGCCATGTTCA+AGG - chr7_3:61231611-61231630 Msa1114410:intron 40.0%
CGACAAACATCATCATCATC+AGG + chr7_3:61231666-61231685 None:intergenic 40.0%
AAACTGAAGCTGCCTAGATT+TGG - chr7_3:61231759-61231778 Msa1114410:three_prime_UTR 40.0%
!! CAAAACTGCTTTTCCCACAA+AGG + chr7_3:61231964-61231983 None:intergenic 40.0%
!! GGAAAAGCAGTTTTGTGCTT+CGG - chr7_3:61231969-61231988 Msa1114410:three_prime_UTR 40.0%
!! TCTTCTATTAGCTTTCGCCA+TGG + chr7_3:61232006-61232025 None:intergenic 40.0%
CATGTATATGCATCCCAAAG+TGG - chr7_3:61232035-61232054 Msa1114410:three_prime_UTR 40.0%
TGAGATCAACAACATTCCCT+GGG - chr7_3:61232119-61232138 Msa1114410:three_prime_UTR 40.0%
! TTTTTCTTCTATGTTGGGGC+GGG + chr7_3:61232244-61232263 None:intergenic 40.0%
! CTTTTTCTTCTATGTTGGGG+CGG + chr7_3:61232245-61232264 None:intergenic 40.0%
CATAGAAGAAAAAGGAGAGG+CGG - chr7_3:61232251-61232270 Msa1114410:three_prime_UTR 40.0%
! GCAGCATAATTTGGTTCAGA+AGG + chr7_3:61232378-61232397 None:intergenic 40.0%
TGAACCAAATTATGCTGCTC+TGG - chr7_3:61232380-61232399 Msa1114410:three_prime_UTR 40.0%
GAACCAAATTATGCTGCTCT+GGG - chr7_3:61232381-61232400 Msa1114410:three_prime_UTR 40.0%
!! AAATTATGCTGCTCTGGGAT+GGG - chr7_3:61232386-61232405 Msa1114410:three_prime_UTR 40.0%
! TCTTTTGCAGCATGTTCAAC+GGG + chr7_3:61232465-61232484 None:intergenic 40.0%
! GAAATAGTGGGAGAGGAAAT+TGG - chr7_3:61232574-61232593 Msa1114410:intron 40.0%
! AATAGTGGGAGAGGAAATTG+GGG - chr7_3:61232576-61232595 Msa1114410:intron 40.0%
ATGTCTTGGTCTAAGAACCA+TGG - chr7_3:61232636-61232655 Msa1114410:intron 40.0%
TAGTGCCATGATGATATCCA+TGG + chr7_3:61232656-61232675 None:intergenic 40.0%
GAGTATCAGATGAATAGAGG+AGG - chr7_3:61232678-61232697 Msa1114410:intron 40.0%
AAACCTATGAAGCTGCTAGA+GGG - chr7_3:61232816-61232835 Msa1114410:intron 40.0%
!! AGGGTCAGTTTTGTGAAAGT+TGG - chr7_3:61232835-61232854 Msa1114410:intron 40.0%
!! TCAGTTTTGTGAAAGTTGGC+AGG - chr7_3:61232839-61232858 Msa1114410:intron 40.0%
CAAAAGACCATATAGCCTTC+AGG + chr7_3:61232942-61232961 None:intergenic 40.0%
! CTGAAGGCTATATGGTCTTT+TGG - chr7_3:61232940-61232959 Msa1114410:intron 40.0%
!! TGAAGCTTTGGGAAAGAACT+AGG - chr7_3:61233243-61233262 Msa1114410:intron 40.0%
GGAAAGAACTAGGCATTAAG+AGG - chr7_3:61233253-61233272 Msa1114410:intron 40.0%
! TCACACTCTAGTTCCAAATG+AGG + chr7_3:61233353-61233372 None:intergenic 40.0%
AACCTTTACCCCATTTCTGT+TGG - chr7_3:61233513-61233532 Msa1114410:intron 40.0%
CACATTCTCCAACAGAAATG+GGG + chr7_3:61233524-61233543 None:intergenic 40.0%
TCTAATGCACTCTCTACATC+AGG + chr7_3:61233617-61233636 None:intergenic 40.0%
TGCATTAGACCTTTCACTTG+TGG - chr7_3:61233628-61233647 Msa1114410:intron 40.0%
CTTTCACTTGTGGAGTCAAT+GGG - chr7_3:61233638-61233657 Msa1114410:intron 40.0%
!! ATTTGAGATGAGCGGGTTTT+TGG + chr7_3:61233672-61233691 None:intergenic 40.0%
! TGCTGAACATTTGGTGATCA+TGG - chr7_3:61233700-61233719 Msa1114410:intron 40.0%
GAGAAAAGAGAGGAATTGTG+AGG - chr7_3:61234178-61234197 Msa1114410:intron 40.0%
GAGAGGAATTGTGAGGTTAA+AGG - chr7_3:61234185-61234204 Msa1114410:intron 40.0%
! GTTAGTAGTTGGACTTGGTT+TGG + chr7_3:61234354-61234373 None:intergenic 40.0%
GTTTGGTTAGTAGTTGGACT+TGG + chr7_3:61234359-61234378 None:intergenic 40.0%
CTAGCAATTTCCCATGGATT+TGG + chr7_3:61234791-61234810 None:intergenic 40.0%
CAAATCCATGGGAAATTGCT+AGG - chr7_3:61234789-61234808 Msa1114410:intron 40.0%
TGATTCCTAGCAATTTCCCA+TGG + chr7_3:61234797-61234816 None:intergenic 40.0%
!! GTTTTAATGGATACCCATGG+TGG - chr7_3:61234818-61234837 Msa1114410:intron 40.0%
TCCCAAAAATGAGGGTTTAG+GGG + chr7_3:61234901-61234920 None:intergenic 40.0%
TAGGAACTATTGGAAGGAGA+AGG - chr7_3:61235012-61235031 Msa1114410:intron 40.0%
AAGGAGCTTAACTAGTGGTT+TGG - chr7_3:61235031-61235050 Msa1114410:intron 40.0%
ATTGGACTACCCAAAAGGAA+AGG + chr7_3:61235127-61235146 None:intergenic 40.0%
GCATAATTGGACTACCCAAA+AGG + chr7_3:61235132-61235151 None:intergenic 40.0%
GTATGATTTCGGCTAGATTC+CGG - chr7_3:61235341-61235360 Msa1114410:intron 40.0%
TGTTCCTATCTTTGGCTAAC+GGG - chr7_3:61235392-61235411 Msa1114410:intron 40.0%
AATGAATACACGACCAATGG+CGG - chr7_3:61235430-61235449 Msa1114410:intron 40.0%
TTCCGGAAAGTGAGAATTGT+TGG - chr7_3:61235773-61235792 Msa1114410:intron 40.0%
ACACATTTCGGCTACACATT+CGG + chr7_3:61235886-61235905 None:intergenic 40.0%
CTACCCATGACTGATATTCT+TGG + chr7_3:61235981-61236000 None:intergenic 40.0%
CAAGAATATCAGTCATGGGT+AGG - chr7_3:61235979-61235998 Msa1114410:intron 40.0%
! GGAACCTTTTGTATCCTAAC+TGG + chr7_3:61236141-61236160 None:intergenic 40.0%
TTTAGACAGAGGGCAATCAT+AGG - chr7_3:61236437-61236456 Msa1114410:CDS 40.0%
TTTATGGAAGAAGTCACACG+TGG - chr7_3:61237209-61237228 Msa1114410:intron 40.0%
TCAAAACTGAAGATAAGGCG+AGG - chr7_3:61237288-61237307 Msa1114410:intron 40.0%
!! CTTTCAGGTTGAGGGTATTA+TGG - chr7_3:61237503-61237522 Msa1114410:intron 40.0%
TATTATGGTCTGTGTGCAAG+TGG - chr7_3:61237518-61237537 Msa1114410:intron 40.0%
AGCAATGGAAAAGACTGAAC+TGG - chr7_3:61237563-61237582 Msa1114410:intron 40.0%
AAAGACTGAACTGGCCAAAT+CGG - chr7_3:61237572-61237591 Msa1114410:intron 40.0%
!! AAGGTGATTTTGGGTAGAAC+CGG - chr7_3:61237607-61237626 Msa1114410:intron 40.0%
!! GTTGATTTGGCTTGTGAACA+TGG - chr7_3:61237635-61237654 Msa1114410:intron 40.0%
! TTGTGGACGGGAATGTTTTA+AGG + chr7_3:61237809-61237828 None:intergenic 40.0%
! CAGTTTGCTCATCTACAGAA+TGG + chr7_3:61237883-61237902 None:intergenic 40.0%
GCAAACTGCATTGAAGTTAC+TGG - chr7_3:61237895-61237914 Msa1114410:CDS 40.0%
TCCGTTATAGGATGAGAAGG+AGG + chr7_3:61231040-61231059 None:intergenic 45.0%
! TGCTTTGAATTCATGCGGTG+CGG - chr7_3:61231429-61231448 Msa1114410:intron 45.0%
GTTTCCAACAGTGCCTTTGT+GGG - chr7_3:61231948-61231967 Msa1114410:three_prime_UTR 45.0%
!!! TTTTCCCACAAAGGCACTGT+TGG + chr7_3:61231955-61231974 None:intergenic 45.0%
!! AAAGCAGTTTTGTGCTTCGG+TGG - chr7_3:61231972-61231991 Msa1114410:three_prime_UTR 45.0%
!! AAGCAGTTTTGTGCTTCGGT+GGG - chr7_3:61231973-61231992 Msa1114410:three_prime_UTR 45.0%
TGCATCCCAAAGTGGTAAAC+TGG - chr7_3:61232043-61232062 Msa1114410:three_prime_UTR 45.0%
GCATCCCAAAGTGGTAAACT+GGG - chr7_3:61232044-61232063 Msa1114410:three_prime_UTR 45.0%
TCGTCCCAGTTTACCACTTT+GGG + chr7_3:61232051-61232070 None:intergenic 45.0%
CTGAGATCAACAACATTCCC+TGG - chr7_3:61232118-61232137 Msa1114410:three_prime_UTR 45.0%
GGATGTGGAAATAGAAGCAG+AGG - chr7_3:61232218-61232237 Msa1114410:three_prime_UTR 45.0%
CGCCCCAACATAGAAGAAAA+AGG - chr7_3:61232243-61232262 Msa1114410:three_prime_UTR 45.0%
! CAGAAGAGGACTGATTCAAG+AGG + chr7_3:61232299-61232318 None:intergenic 45.0%
CTCTTGAATCAGTCCTCTTC+TGG - chr7_3:61232297-61232316 Msa1114410:three_prime_UTR 45.0%
AATCAGTCCTCTTCTGGTCT+TGG - chr7_3:61232303-61232322 Msa1114410:three_prime_UTR 45.0%
!! TCCTCTTCTGGTCTTGGATT+GGG - chr7_3:61232309-61232328 Msa1114410:three_prime_UTR 45.0%
CATCCCAGAGCAGCATAATT+TGG + chr7_3:61232387-61232406 None:intergenic 45.0%
!! CAAATTATGCTGCTCTGGGA+TGG - chr7_3:61232385-61232404 Msa1114410:three_prime_UTR 45.0%
GTCAGAATGATTCTCAGGGA+TGG - chr7_3:61232502-61232521 Msa1114410:intron 45.0%
ATTCTCAGGGATGGAATCAG+AGG - chr7_3:61232511-61232530 Msa1114410:intron 45.0%
TTCTCAGGGATGGAATCAGA+GGG - chr7_3:61232512-61232531 Msa1114410:intron 45.0%
! CAAGGAAGAAATAGTGGGAG+AGG - chr7_3:61232567-61232586 Msa1114410:intron 45.0%
GAGAGGAAATTGGGGAACAT+GGG - chr7_3:61232584-61232603 Msa1114410:intron 45.0%
AGAGGAGGAAGAAGAAATGG+AGG - chr7_3:61232693-61232712 Msa1114410:intron 45.0%
GGAAGAAGAAATGGAGGAAG+AGG - chr7_3:61232699-61232718 Msa1114410:intron 45.0%
AGAAGAAATGGAGGAAGAGG+AGG - chr7_3:61232702-61232721 Msa1114410:intron 45.0%
GAAACCTATGAAGCTGCTAG+AGG - chr7_3:61232815-61232834 Msa1114410:intron 45.0%
GCATTCACCTGAAGGCTATA+TGG - chr7_3:61232932-61232951 Msa1114410:intron 45.0%
CTCCAACAGAAATGGGGTAA+AGG + chr7_3:61233518-61233537 None:intergenic 45.0%
!! CCATTGACTCCACAAGTGAA+AGG + chr7_3:61233640-61233659 None:intergenic 45.0%
CCTTTCACTTGTGGAGTCAA+TGG - chr7_3:61233637-61233656 Msa1114410:intron 45.0%
CAAAAGTGGATCTGTAGACG+TGG - chr7_3:61233735-61233754 Msa1114410:intron 45.0%
! GCAATTGTCCTTTTTGCCCT+TGG + chr7_3:61234472-61234491 None:intergenic 45.0%
!! GCCGATGGTTAGTTTAGAGA+AGG + chr7_3:61234575-61234594 None:intergenic 45.0%
TAGTAGAAAGAGAGAGCCGA+TGG + chr7_3:61234590-61234609 None:intergenic 45.0%
CTAGCTTCAAATGAGAGGGA+AGG + chr7_3:61234727-61234746 None:intergenic 45.0%
CCACTTGCTTATTCCACCAT+GGG + chr7_3:61234834-61234853 None:intergenic 45.0%
ACCACTTGCTTATTCCACCA+TGG + chr7_3:61234835-61234854 None:intergenic 45.0%
CTTCCCTTTCCTACTCCTTA+TGG - chr7_3:61234869-61234888 Msa1114410:intron 45.0%
CCTCCATAAGGAGTAGGAAA+GGG + chr7_3:61234875-61234894 None:intergenic 45.0%
CAAAAATGAGGGTTTAGGGG+CGG + chr7_3:61234898-61234917 None:intergenic 45.0%
!! GCCCCTAAACCCTCATTTTT+GGG - chr7_3:61234897-61234916 Msa1114410:intron 45.0%
AGGAGAAGGAGCTTAACTAG+TGG - chr7_3:61235026-61235045 Msa1114410:intron 45.0%
! TGTGCCACAAAGTGTTCTAG+AGG - chr7_3:61235064-61235083 Msa1114410:intron 45.0%
!! GGTTCCTCTAGAACACTTTG+TGG + chr7_3:61235071-61235090 None:intergenic 45.0%
AGGAACTCACAATCTTGTGG+AGG + chr7_3:61235092-61235111 None:intergenic 45.0%
TTCGGCTAGATTCCGGAAAT+TGG - chr7_3:61235348-61235367 Msa1114410:intron 45.0%
CATTCCCGTTAGCCAAAGAT+AGG + chr7_3:61235399-61235418 None:intergenic 45.0%
CACATTTCGGCTACACATTC+GGG + chr7_3:61235885-61235904 None:intergenic 45.0%
!! TTTTGCTATCCTCGCCAGTT+AGG - chr7_3:61236124-61236143 Msa1114410:three_prime_UTR 45.0%
! CTTTTGTATCCTAACTGGCG+AGG + chr7_3:61236136-61236155 None:intergenic 45.0%
CTCGCCAGTTAGGATACAAA+AGG - chr7_3:61236134-61236153 Msa1114410:three_prime_UTR 45.0%
TACAAAAGGTTCCCGTCAGT+TGG - chr7_3:61236148-61236167 Msa1114410:three_prime_UTR 45.0%
TTATTGTGGGGTCATCCTCA+CGG + chr7_3:61236186-61236205 None:intergenic 45.0%
GATGACCCCACAATAATCAG+AGG - chr7_3:61236190-61236209 Msa1114410:CDS 45.0%
GGACTCCTCTGATTATTGTG+GGG + chr7_3:61236198-61236217 None:intergenic 45.0%
CGGACTCCTCTGATTATTGT+GGG + chr7_3:61236199-61236218 None:intergenic 45.0%
CCACAATAATCAGAGGAGTC+CGG - chr7_3:61236197-61236216 Msa1114410:CDS 45.0%
CGGTAATATTTCCAACTGGC+GGG + chr7_3:61236242-61236261 None:intergenic 45.0%
CCGGTAATATTTCCAACTGG+CGG + chr7_3:61236243-61236262 None:intergenic 45.0%
CCGCCAGTTGGAAATATTAC+CGG - chr7_3:61236240-61236259 Msa1114410:CDS 45.0%
TCTTTCCTCTTGGATGACTG+TGG + chr7_3:61236550-61236569 None:intergenic 45.0%
AGGACTCCTGTCTGATTATC+TGG + chr7_3:61236758-61236777 None:intergenic 45.0%
GGGCGTTACACTAACTAACA+TGG - chr7_3:61236880-61236899 Msa1114410:CDS 45.0%
CAATACTGTCTCACGTACAC+AGG - chr7_3:61237152-61237171 Msa1114410:intron 45.0%
ATTTGGGGGACGTGGATTTA+TGG - chr7_3:61237193-61237212 Msa1114410:intron 45.0%
GTTATAGCCCTGAAACCTGA+TGG + chr7_3:61237329-61237348 None:intergenic 45.0%
TCTTGACATCTGGTGCTTTC+AGG - chr7_3:61237488-61237507 Msa1114410:intron 45.0%
!! ATCTGGTGCTTTCAGGTTGA+GGG - chr7_3:61237495-61237514 Msa1114410:intron 45.0%
GGCCAAATCGGTATCAAGTT+TGG - chr7_3:61237584-61237603 Msa1114410:intron 45.0%
AGATCCTCCATGGACATTTG+TGG + chr7_3:61237826-61237845 None:intergenic 45.0%
AGTTAGGCTTAGATCCTCCA+TGG + chr7_3:61237836-61237855 None:intergenic 45.0%
ACCATCATCAAGTGGGTCAG+TGG - chr7_3:61231010-61231029 Msa1114410:three_prime_UTR 50.0%
CCATCATCAAGTGGGTCAGT+GGG - chr7_3:61231011-61231030 Msa1114410:three_prime_UTR 50.0%
CATCATCAAGTGGGTCAGTG+GGG - chr7_3:61231012-61231031 Msa1114410:three_prime_UTR 50.0%
! TGCTGTCACATGCAGGTTGA+CGG - chr7_3:61231222-61231241 Msa1114410:three_prime_UTR 50.0%
GGTTTCCAACAGTGCCTTTG+TGG - chr7_3:61231947-61231966 Msa1114410:three_prime_UTR 50.0%
GTCGTCCCAGTTTACCACTT+TGG + chr7_3:61232052-61232071 None:intergenic 50.0%
TCAGGCAATGGTATGTCCCA+GGG + chr7_3:61232138-61232157 None:intergenic 50.0%
ATCAGGCAATGGTATGTCCC+AGG + chr7_3:61232139-61232158 None:intergenic 50.0%
!! GTCCTCTTCTGGTCTTGGAT+TGG - chr7_3:61232308-61232327 Msa1114410:three_prime_UTR 50.0%
TCCCAATCCAAGACCAGAAG+AGG + chr7_3:61232313-61232332 None:intergenic 50.0%
! TTGGATTGGGACCTACTGGA+TGG - chr7_3:61232322-61232341 Msa1114410:three_prime_UTR 50.0%
! TGGATTGGGACCTACTGGAT+GGG - chr7_3:61232323-61232342 Msa1114410:three_prime_UTR 50.0%
AATCAGAGGGAGCGATATGC+TGG - chr7_3:61232525-61232544 Msa1114410:intron 50.0%
GGAGAGGAAATTGGGGAACA+TGG - chr7_3:61232583-61232602 Msa1114410:intron 50.0%
GGAAATTGGGGAACATGGGA+TGG - chr7_3:61232588-61232607 Msa1114410:intron 50.0%
AGAAATGGAGGAAGAGGAGG+AGG - chr7_3:61232705-61232724 Msa1114410:intron 50.0%
AGGTTGCTACTCCTAGTGCA+TGG - chr7_3:61232757-61232776 Msa1114410:intron 50.0%
AATGCTGTGGAGTGCAAGCA+AGG - chr7_3:61232793-61232812 Msa1114410:intron 50.0%
TGACCCTCTAGCAGCTTCAT+AGG + chr7_3:61232822-61232841 None:intergenic 50.0%
TGGATCTGTAGACGTGGTTG+TGG - chr7_3:61233741-61233760 Msa1114410:intron 50.0%
!! GCGGCTAGCTTCAAATGAGA+GGG + chr7_3:61234731-61234750 None:intergenic 50.0%
GGAAATATGAGGAAAGGGGG+CGG + chr7_3:61234750-61234769 None:intergenic 50.0%
! CCCATGGTGGAATAAGCAAG+TGG - chr7_3:61234831-61234850 Msa1114410:intron 50.0%
CCCTTTCCTACTCCTTATGG+AGG - chr7_3:61234872-61234891 Msa1114410:intron 50.0%
GCCTCCATAAGGAGTAGGAA+AGG + chr7_3:61234876-61234895 None:intergenic 50.0%
! CGCCCCTAAACCCTCATTTT+TGG - chr7_3:61234896-61234915 Msa1114410:intron 50.0%
TACACGACCAATGGCGGTTA+CGG - chr7_3:61235436-61235455 Msa1114410:intron 50.0%
GTTCAATCCGTAACCGCCAT+TGG + chr7_3:61235446-61235465 None:intergenic 50.0%
TCATGGGTAGGTCACTAACC+CGG - chr7_3:61235991-61236010 Msa1114410:intron 50.0%
AAGGTTCCCGTCAGTTGGAA+CGG - chr7_3:61236153-61236172 Msa1114410:three_prime_UTR 50.0%
ATAGTGCCCGTTCCAACTGA+CGG + chr7_3:61236163-61236182 None:intergenic 50.0%
CCGGACTCCTCTGATTATTG+TGG + chr7_3:61236200-61236219 None:intergenic 50.0%
AAACTCAGGTGGTGTAACCC+CGG + chr7_3:61236284-61236303 None:intergenic 50.0%
GGCAATCATAGGTATCCCCA+AGG - chr7_3:61236448-61236467 Msa1114410:CDS 50.0%
TAGGCTGCAGGAAATCCTTG+GGG + chr7_3:61236466-61236485 None:intergenic 50.0%
CTAGGCTGCAGGAAATCCTT+GGG + chr7_3:61236467-61236486 None:intergenic 50.0%
GATTTCCTGCAGCCTAGGAT+AGG - chr7_3:61236470-61236489 Msa1114410:CDS 50.0%
ATGGAAGAAGTCACACGTGG+TGG - chr7_3:61237212-61237231 Msa1114410:intron 50.0%
!! CATCTGGTGCTTTCAGGTTG+AGG - chr7_3:61237494-61237513 Msa1114410:intron 50.0%
!! TATACCAGCACTGGCAGCAA+TGG - chr7_3:61237548-61237567 Msa1114410:intron 50.0%
! TTTTCCATTGCTGCCAGTGC+TGG + chr7_3:61237555-61237574 None:intergenic 50.0%
!! GTGATTTTGGGTAGAACCGG+AGG - chr7_3:61237610-61237629 Msa1114410:intron 50.0%
! AGAACCGGAGGTCGTTGATT+TGG - chr7_3:61237622-61237641 Msa1114410:intron 50.0%
CAAGCCAAATCAACGACCTC+CGG + chr7_3:61237629-61237648 None:intergenic 50.0%
TTCCCGTCCACAAATGTCCA+TGG - chr7_3:61237816-61237835 Msa1114410:intron 50.0%
CTCCATGGACATTTGTGGAC+GGG + chr7_3:61237821-61237840 None:intergenic 50.0%
CCTCCATGGACATTTGTGGA+CGG + chr7_3:61237822-61237841 None:intergenic 50.0%
CCCACTGACCCACTTGATGA+TGG + chr7_3:61231014-61231033 None:intergenic 55.0%
GGACGACTCTGCTGTCAAAG+AGG - chr7_3:61232065-61232084 Msa1114410:three_prime_UTR 55.0%
! GGTCTTGGATTGGGACCTAC+TGG - chr7_3:61232318-61232337 Msa1114410:three_prime_UTR 55.0%
GGATTGGGACCTACTGGATG+GGG - chr7_3:61232324-61232343 Msa1114410:three_prime_UTR 55.0%
GATTGGGACCTACTGGATGG+GGG - chr7_3:61232325-61232344 Msa1114410:three_prime_UTR 55.0%
ATTGGGACCTACTGGATGGG+GGG - chr7_3:61232326-61232345 Msa1114410:three_prime_UTR 55.0%
AATGGAGGAAGAGGAGGAGG+TGG - chr7_3:61232708-61232727 Msa1114410:intron 55.0%
ATGGAGGAAGAGGAGGAGGT+GGG - chr7_3:61232709-61232728 Msa1114410:intron 55.0%
TGGATCATCGGTCACCACAC+AGG + chr7_3:61232986-61233005 None:intergenic 55.0%
!! GGCGGCTAGCTTCAAATGAG+AGG + chr7_3:61234732-61234751 None:intergenic 55.0%
CATGGGTAGGTCACTAACCC+GGG - chr7_3:61235992-61236011 Msa1114410:intron 55.0%
AGGTTCCCGTCAGTTGGAAC+GGG - chr7_3:61236154-61236173 Msa1114410:three_prime_UTR 55.0%
TAGTGCCCGTTCCAACTGAC+GGG + chr7_3:61236162-61236181 None:intergenic 55.0%
AACCCAACAGACGGGGATAC+CGG + chr7_3:61236219-61236238 None:intergenic 55.0%
CCTAGGCTGCAGGAAATCCT+TGG + chr7_3:61236468-61236487 None:intergenic 55.0%
CCAAGGATTTCCTGCAGCCT+AGG - chr7_3:61236465-61236484 Msa1114410:CDS 55.0%
TTCCTGCAGCCTAGGATAGG+TGG - chr7_3:61236473-61236492 Msa1114410:CDS 55.0%
CAGTGAGCTCCACCTATCCT+AGG + chr7_3:61236485-61236504 None:intergenic 55.0%
CAGGTCCACAGTCATCCAAG+AGG - chr7_3:61236542-61236561 Msa1114410:CDS 55.0%
! CCACGTCCCCCAAATGCTTT+TGG + chr7_3:61237188-61237207 None:intergenic 55.0%
!! CCAAAAGCATTTGGGGGACG+TGG - chr7_3:61237185-61237204 Msa1114410:intron 55.0%
CCGTCCACAAATGTCCATGG+AGG - chr7_3:61237819-61237838 Msa1114410:intron 55.0%
GACGGAGCACAGTTGTGCTG+TGG - chr7_3:61231240-61231259 Msa1114410:three_prime_UTR 60.0%
! CTTCGGTGGGCTCAGTTCCA+TGG - chr7_3:61231986-61232005 Msa1114410:three_prime_UTR 60.0%
TCTTCGTCCCCCCATCCAGT+AGG + chr7_3:61232336-61232355 None:intergenic 60.0%
TGGAGGAAGAGGAGGAGGTG+GGG - chr7_3:61232710-61232729 Msa1114410:intron 60.0%
GTTTAGGGGCGGCCTCCATA+AGG + chr7_3:61234887-61234906 None:intergenic 60.0%
TGGAACGGGCACTATCCGTG+AGG - chr7_3:61236168-61236187 Msa1114410:exon 60.0%
AGTCCGGTATCCCCGTCTGT+TGG - chr7_3:61236213-61236232 Msa1114410:CDS 60.0%
GTCCGGTATCCCCGTCTGTT+GGG - chr7_3:61236214-61236233 Msa1114410:CDS 60.0%
ACTGGCGGGAACCCAACAGA+CGG + chr7_3:61236228-61236247 None:intergenic 60.0%
TCTGTTGGGTTCCCGCCAGT+TGG - chr7_3:61236228-61236247 Msa1114410:CDS 60.0%
CTCCACCTATCCTAGGCTGC+AGG + chr7_3:61236478-61236497 None:intergenic 60.0%
GGAGAGGCGGCTGTGACTCT+AGG - chr7_3:61232264-61232283 Msa1114410:three_prime_UTR 65.0%
GGAGGAAGAGGAGGAGGTGG+GGG - chr7_3:61232711-61232730 Msa1114410:intron 65.0%
GAAGAGGAGGAGGTGGGGGA+AGG - chr7_3:61232715-61232734 Msa1114410:intron 65.0%
AGGAGGAGGTGGGGGAAGGA+GGG - chr7_3:61232719-61232738 Msa1114410:intron 65.0%
GGGCGGCCTCCATAAGGAGT+AGG + chr7_3:61234881-61234900 None:intergenic 65.0%
TGGCGGGAACCCAACAGACG+GGG + chr7_3:61236226-61236245 None:intergenic 65.0%
CTGGCGGGAACCCAACAGAC+GGG + chr7_3:61236227-61236246 None:intergenic 65.0%
GAGGAGGAGGTGGGGGAAGG+AGG - chr7_3:61232718-61232737 Msa1114410:intron 70.0%
GGAGGAGGTGGGGGAAGGAG+GGG - chr7_3:61232720-61232739 Msa1114410:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 61230797 61238159 61230797 ID=Msa1114410;Name=Msa1114410
chr7_3 mRNA 61230797 61238159 61230797 ID=Msa1114410-mRNA-1;Parent=Msa1114410;Name=Msa1114410-mRNA-1;_AED=0.24;_eAED=0.24;_QI=179|1|1|1|0.2|0.33|6|1773|312
chr7_3 exon 61230797 61231446 61230797 ID=Msa1114410-mRNA-1:exon:13876;Parent=Msa1114410-mRNA-1
chr7_3 exon 61231647 61232411 61231647 ID=Msa1114410-mRNA-1:exon:13875;Parent=Msa1114410-mRNA-1
chr7_3 exon 61233855 61233941 61233855 ID=Msa1114410-mRNA-1:exon:13874;Parent=Msa1114410-mRNA-1
chr7_3 exon 61235185 61235356 61235185 ID=Msa1114410-mRNA-1:exon:13873;Parent=Msa1114410-mRNA-1
chr7_3 exon 61236075 61237015 61236075 ID=Msa1114410-mRNA-1:exon:13872;Parent=Msa1114410-mRNA-1
chr7_3 exon 61237884 61238159 61237884 ID=Msa1114410-mRNA-1:exon:13871;Parent=Msa1114410-mRNA-1
chr7_3 five_prime_UTR 61237981 61238159 61237981 ID=Msa1114410-mRNA-1:five_prime_utr;Parent=Msa1114410-mRNA-1
chr7_3 CDS 61237884 61237980 61237884 ID=Msa1114410-mRNA-1:cds;Parent=Msa1114410-mRNA-1
chr7_3 CDS 61236174 61237015 61236174 ID=Msa1114410-mRNA-1:cds;Parent=Msa1114410-mRNA-1
chr7_3 three_prime_UTR 61236075 61236173 61236075 ID=Msa1114410-mRNA-1:three_prime_utr;Parent=Msa1114410-mRNA-1
chr7_3 three_prime_UTR 61235185 61235356 61235185 ID=Msa1114410-mRNA-1:three_prime_utr;Parent=Msa1114410-mRNA-1
chr7_3 three_prime_UTR 61233855 61233941 61233855 ID=Msa1114410-mRNA-1:three_prime_utr;Parent=Msa1114410-mRNA-1
chr7_3 three_prime_UTR 61231647 61232411 61231647 ID=Msa1114410-mRNA-1:three_prime_utr;Parent=Msa1114410-mRNA-1
chr7_3 three_prime_UTR 61230797 61231446 61230797 ID=Msa1114410-mRNA-1:three_prime_utr;Parent=Msa1114410-mRNA-1
Gene Sequence

>Msa1114410

ATGGATAATTGGAGAAGAAACCAAAGGATCAGTAACCATCATCAAGTGGGTCAGTGGGGATCCTCCTTCTCATCCTATAACGGAAAACCACCTTTAGATAATAGGTTTCCAACAGTGCCTTTGTGGGAAAAGCAGTTTTGTGCTTCGGTGGGCTCAGTTCCATGGCGAAAGCTAATAGAAGACAAGAGGTACATGTATATGCATCCCAAAGTGGTAAACTGGGACGACTCTGCTGTCAAAGAGGCATTCGACAATGCAAAAAACAGGTATTGGGCTGAGATCAACAACATTCCCTGGGACATACCATTGCCTGATCCTAACATTTACATAGATGATGTAGATTCGAATGCAAGTGTTGATTCTGAACTTTATTTGGATGTGGAAATAGAAGCAGAGGCCCGCCCCAACATAGAAGAAAAAGGAGAGGCGGCTGTGACTCTAGGAAGTTCTCTCCTCTTGAATCAGTCCTCTTCTGGTCTTGGATTGGGACCTACTGGATGGGGGGACGAAGAAGACGAAAAGTTAACAAAGCCTTCTGAACCAAATTATGCTGCTCTGGGATGGGAATCAAACCAACATGAAAATAATGAAACAAACTCTTGGGAACAGTATCATGCTCCCGTTGAACATGCTGCAAAAGAATATGGATGGCAAAATGGTCAGAATGATTCTCAGGGATGGAATCAGAGGGAGCGATATGCTGGTGACTTGTATAACAAGTATCAAGGAAGAAATAGTGGGAGAGGAAATTGGGGAACATGGGATGGATTTAACAGAAAGAAAGAAAACAACATGTCTTGGTCTAAGAACCATGGATATCATCATGGCACTAATGAGTATCAGATGAATAGAGGAGGAAGAAGAAATGGAGGAAGAGGAGGAGGTGGGGGAAGGAGGGGAAAATTTGCTTATAAGGTTGCTACTCCTAGTGCATGGTAA

Protein sequence

>Msa1114410

MDNWRRNQRISNHHQVGQWGSSFSSYNGKPPLDNRFPTVPLWEKQFCASVGSVPWRKLIEDKRYMYMHPKVVNWDDSAVKEAFDNAKNRYWAEINNIPWDIPLPDPNIYIDDVDSNASVDSELYLDVEIEAEARPNIEEKGEAAVTLGSSLLLNQSSSGLGLGPTGWGDEEDEKLTKPSEPNYAALGWESNQHENNETNSWEQYHAPVEHAAKEYGWQNGQNDSQGWNQRERYAGDLYNKYQGRNSGRGNWGTWDGFNRKKENNMSWSKNHGYHHGTNEYQMNRGGRRNGGRGGGGGRRGKFAYKVATPSAW*