Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357320 | XP_013459327.1 | 79.928 | 1659 | 305 | 10 | 1 | 1646 | 1 | 1644 | 0.0 | 2654 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357320 | sp|O15050|TRNK1_HUMAN | 27.229 | 830 | 425 | 31 | 947 | 1630 | 882 | 1678 | 2.24e-50 | 201 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357320 | G8A365 | 79.928 | 1659 | 305 | 10 | 1 | 1646 | 1 | 1644 | 0.0 | 2654 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017510 | Msa0357320 | 0.838641 | 2.549358e-57 | -8.615850e-47 |
Msa0123300 | Msa0357320 | 0.807436 | 5.060222e-50 | -8.615850e-47 |
Msa0139060 | Msa0357320 | 0.801075 | 1.068153e-48 | -8.615850e-47 |
Msa0157290 | Msa0357320 | 0.839167 | 1.863241e-57 | -8.615850e-47 |
Msa0175730 | Msa0357320 | 0.805054 | 1.606717e-49 | -8.615850e-47 |
Msa0211150 | Msa0357320 | 0.811074 | 8.397758e-51 | -8.615850e-47 |
Msa0225100 | Msa0357320 | 0.810883 | 9.234720e-51 | -8.615850e-47 |
Msa0237310 | Msa0357320 | 0.802232 | 6.184868e-49 | -8.615850e-47 |
Msa0258310 | Msa0357320 | 0.804980 | 1.664555e-49 | -8.615850e-47 |
Msa0259500 | Msa0357320 | 0.803883 | 2.818787e-49 | -8.615850e-47 |
Msa0261340 | Msa0357320 | 0.803131 | 4.035194e-49 | -8.615850e-47 |
Msa0266180 | Msa0357320 | 0.810076 | 1.379336e-50 | -8.615850e-47 |
Msa0274730 | Msa0357320 | 0.802571 | 5.266596e-49 | -8.615850e-47 |
Msa0283450 | Msa0357320 | 0.801553 | 8.528349e-49 | -8.615850e-47 |
Msa0287740 | Msa0357320 | 0.820882 | 5.423623e-53 | -8.615850e-47 |
Msa0305700 | Msa0357320 | 0.801794 | 7.610752e-49 | -8.615850e-47 |
Msa0341540 | Msa0357320 | 0.815779 | 7.759888e-52 | -8.615850e-47 |
Msa0357290 | Msa0357320 | 0.872584 | 2.842557e-67 | -8.615850e-47 |
Msa0357320 | Msa0357340 | 0.878235 | 3.308650e-69 | -8.615850e-47 |
Msa0357320 | Msa0357350 | 0.965804 | 4.409709e-125 | -8.615850e-47 |
Msa0357320 | Msa0363790 | 0.800614 | 1.326828e-48 | -8.615850e-47 |
Msa0357320 | Msa0392510 | 0.818435 | 1.962960e-52 | -8.615850e-47 |
Msa0357320 | Msa0417880 | 0.816672 | 4.902473e-52 | -8.615850e-47 |
Msa0357320 | Msa0464680 | 0.826183 | 3.119784e-54 | -8.615850e-47 |
Msa0357320 | Msa0488560 | 0.810905 | 9.135134e-51 | -8.615850e-47 |
Msa0357320 | Msa0601750 | 0.822748 | 2.006213e-53 | -8.615850e-47 |
Msa0357320 | Msa0616070 | 0.802027 | 6.815128e-49 | -8.615850e-47 |
Msa0357320 | Msa0627450 | 0.800096 | 1.692024e-48 | -8.615850e-47 |
Msa0357320 | Msa0657970 | 0.801694 | 7.979501e-49 | -8.615850e-47 |
Msa0357320 | Msa0669320 | 0.812781 | 3.566753e-51 | -8.615850e-47 |
Msa0357320 | Msa0693010 | -0.800362 | 1.493716e-48 | -8.615850e-47 |
Msa0357320 | Msa0703050 | 0.805623 | 1.220721e-49 | -8.615850e-47 |
Msa0357320 | Msa0820770 | 0.800927 | 1.145333e-48 | -8.615850e-47 |
Msa0357320 | Msa0829300 | 0.802406 | 5.695321e-49 | -8.615850e-47 |
Msa0357320 | Msa0829330 | 0.807023 | 6.187385e-50 | -8.615850e-47 |
Msa0357320 | Msa0832340 | 0.804783 | 1.830652e-49 | -8.615850e-47 |
Msa0357320 | Msa0834770 | 0.816344 | 5.805810e-52 | -8.615850e-47 |
Msa0357320 | Msa0838580 | 0.807310 | 5.380313e-50 | -8.615850e-47 |
Msa0357320 | Msa0880140 | 0.834054 | 3.740437e-56 | -8.615850e-47 |
Msa0357320 | Msa0909140 | 0.805913 | 1.061075e-49 | -8.615850e-47 |
Msa0357320 | Msa0945110 | 0.806736 | 7.116167e-50 | -8.615850e-47 |
Msa0357320 | Msa0963270 | 0.800734 | 1.254289e-48 | -8.615850e-47 |
Msa0357320 | Msa0966400 | 0.803441 | 3.481040e-49 | -8.615850e-47 |
Msa0357320 | Msa0967870 | 0.821523 | 3.858799e-53 | -8.615850e-47 |
Msa0357320 | Msa1005870 | 0.801043 | 1.084453e-48 | -8.615850e-47 |
Msa0357320 | Msa1019000 | 0.830617 | 2.654512e-55 | -8.615850e-47 |
Msa0357320 | Msa1019150 | 0.806876 | 6.647033e-50 | -8.615850e-47 |
Msa0357320 | Msa1019430 | 0.821799 | 3.331305e-53 | -8.615850e-47 |
Msa0357320 | Msa1019470 | 0.825711 | 4.037965e-54 | -8.615850e-47 |
Msa0357320 | Msa1020510 | 0.813397 | 2.612590e-51 | -8.615850e-47 |
Msa0357320 | Msa1041670 | 0.810629 | 1.047971e-50 | -8.615850e-47 |
Msa0357320 | Msa1081330 | 0.800167 | 1.636279e-48 | -8.615850e-47 |
Msa0357320 | Msa1092010 | 0.800254 | 1.570811e-48 | -8.615850e-47 |
Msa0357320 | Msa1111130 | 0.803372 | 3.597709e-49 | -8.615850e-47 |
Msa0357320 | Msa1137570 | 0.804873 | 1.752901e-49 | -8.615850e-47 |
Msa0357320 | Msa1140210 | 0.814948 | 1.187790e-51 | -8.615850e-47 |
Msa0357320 | Msa1147740 | 0.821114 | 4.796693e-53 | -8.615850e-47 |
Msa0357320 | Msa1151910 | 0.810051 | 1.396892e-50 | -8.615850e-47 |
Msa0357320 | Msa1166560 | 0.810017 | 1.420291e-50 | -8.615850e-47 |
Msa0357320 | Msa1189070 | 0.804660 | 1.941623e-49 | -8.615850e-47 |
Msa0357320 | Msa1199830 | -0.801417 | 9.094420e-49 | -8.615850e-47 |
Msa0357320 | Msa1324500 | 0.804160 | 2.468481e-49 | -8.615850e-47 |
Msa0357320 | Msa1360060 | 0.804805 | 1.810934e-49 | -8.615850e-47 |
Msa0357320 | Msa1366340 | 0.816390 | 5.667095e-52 | -8.615850e-47 |
Msa0357320 | Msa1372760 | 0.802776 | 4.778211e-49 | -8.615850e-47 |
Msa0357320 | Msa1409870 | 0.803371 | 3.599709e-49 | -8.615850e-47 |
Msa0357320 | Msa1444210 | 0.940602 | 1.763021e-100 | -8.615850e-47 |
Msa0357320 | Msa1466540 | 0.814163 | 1.771661e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357320 | MtrunA17_Chr8g0375181 | 53.236 | 1715 | 693 | 27 | 13 | 1644 | 78 | 1766 | 0.0 | 1697 |
Msa0357320 | MtrunA17_Chr8g0375191 | 52.938 | 1702 | 698 | 29 | 13 | 1644 | 21 | 1689 | 0.0 | 1688 |
Msa0357320 | MtrunA17_Chr8g0375151 | 51.571 | 1687 | 693 | 30 | 40 | 1644 | 1 | 1645 | 0.0 | 1592 |
Msa0357320 | MtrunA17_Chr3g0094211 | 75.692 | 1012 | 225 | 6 | 1 | 1002 | 1 | 1001 | 0.0 | 1558 |
Msa0357320 | MtrunA17_Chr3g0094221 | 86.687 | 646 | 79 | 4 | 1004 | 1646 | 17 | 658 | 0.0 | 1100 |
Msa0357320 | MtrunA17_Chr3g0109541 | 37.917 | 960 | 489 | 22 | 17 | 913 | 14 | 929 | 0.0 | 591 |
Msa0357320 | MtrunA17_Chr5g0433471 | 36.814 | 929 | 488 | 21 | 1 | 868 | 1 | 891 | 1.17e-173 | 547 |
Msa0357320 | MtrunA17_Chr5g0433371 | 34.523 | 953 | 510 | 20 | 1 | 886 | 1 | 906 | 2.35e-164 | 523 |
Msa0357320 | MtrunA17_Chr5g0433321 | 34.768 | 906 | 516 | 22 | 17 | 886 | 16 | 882 | 5.00e-162 | 515 |
Msa0357320 | MtrunA17_Chr5g0433361 | 36.243 | 905 | 457 | 20 | 20 | 873 | 32 | 867 | 1.33e-158 | 506 |
Msa0357320 | MtrunA17_Chr5g0435821 | 45.310 | 629 | 243 | 14 | 765 | 1339 | 6 | 587 | 1.30e-155 | 487 |
Msa0357320 | MtrunA17_Chr8g0375871 | 46.543 | 593 | 261 | 11 | 1072 | 1644 | 663 | 1219 | 5.43e-153 | 510 |
Msa0357320 | MtrunA17_Chr8g0375871 | 42.793 | 673 | 337 | 15 | 8 | 656 | 11 | 659 | 4.15e-143 | 483 |
Msa0357320 | MtrunA17_Chr8g0375861 | 46.543 | 593 | 261 | 11 | 1072 | 1644 | 663 | 1219 | 8.74e-153 | 510 |
Msa0357320 | MtrunA17_Chr8g0375861 | 42.793 | 673 | 337 | 15 | 8 | 656 | 11 | 659 | 5.89e-143 | 482 |
Msa0357320 | MtrunA17_Chr3g0109551 | 39.782 | 641 | 322 | 15 | 407 | 1017 | 481 | 1087 | 2.72e-127 | 427 |
Msa0357320 | MtrunA17_Chr3g0109551 | 34.500 | 400 | 234 | 11 | 21 | 409 | 16 | 398 | 4.21e-58 | 220 |
Msa0357320 | MtrunA17_Chr5g0433421 | 49.709 | 344 | 163 | 4 | 545 | 885 | 653 | 989 | 2.75e-97 | 338 |
Msa0357320 | MtrunA17_Chr5g0433421 | 33.831 | 402 | 231 | 10 | 17 | 408 | 16 | 392 | 8.81e-47 | 184 |
Msa0357320 | MtrunA17_Chr5g0433511 | 41.324 | 438 | 217 | 8 | 433 | 868 | 492 | 891 | 1.69e-94 | 328 |
Msa0357320 | MtrunA17_Chr5g0433511 | 33.413 | 419 | 232 | 14 | 17 | 408 | 11 | 409 | 5.86e-45 | 177 |
Msa0357320 | MtrunA17_Chr5g0433341 | 50.000 | 184 | 91 | 1 | 551 | 733 | 5 | 188 | 5.39e-59 | 201 |
Msa0357320 | MtrunA17_Chr5g0433351 | 30.849 | 483 | 290 | 14 | 18 | 487 | 17 | 468 | 2.52e-52 | 192 |
Msa0357320 | MtrunA17_Chr8g0343741 | 35.294 | 306 | 191 | 7 | 553 | 855 | 966 | 1267 | 3.18e-47 | 186 |
Msa0357320 | MtrunA17_Chr5g0422511 | 30.576 | 399 | 262 | 9 | 464 | 856 | 364 | 753 | 4.54e-43 | 171 |
Msa0357320 | MtrunA17_Chr5g0433331 | 52.555 | 137 | 65 | 0 | 735 | 871 | 1 | 137 | 5.86e-42 | 152 |
Msa0357320 | MtrunA17_Chr2g0334291 | 37.063 | 286 | 162 | 7 | 583 | 854 | 1791 | 2072 | 2.44e-40 | 164 |
Msa0357320 | MtrunA17_Chr1g0173701 | 30.341 | 323 | 205 | 6 | 571 | 876 | 84 | 403 | 3.41e-40 | 154 |
Msa0357320 | MtrunA17_Chr5g0400101 | 37.868 | 272 | 150 | 6 | 583 | 846 | 641 | 901 | 2.06e-38 | 157 |
Msa0357320 | MtrunA17_Chr7g0257921 | 30.405 | 296 | 179 | 11 | 559 | 842 | 347 | 627 | 2.10e-24 | 110 |
Msa0357320 | MtrunA17_Chr2g0304151 | 28.869 | 336 | 183 | 14 | 546 | 842 | 489 | 807 | 1.51e-22 | 105 |
Msa0357320 | MtrunA17_Chr5g0394941 | 28.869 | 336 | 183 | 14 | 546 | 842 | 489 | 807 | 2.16e-22 | 105 |
Msa0357320 | MtrunA17_Chr1g0165651 | 27.961 | 304 | 193 | 8 | 547 | 834 | 621 | 914 | 3.24e-20 | 97.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357320 | AT1G65810.1 | 36.226 | 1060 | 588 | 26 | 18 | 1052 | 22 | 1018 | 0.0 | 603 |
Msa0357320 | AT1G65810.3 | 36.755 | 1023 | 570 | 24 | 18 | 1015 | 22 | 992 | 0.0 | 601 |
Msa0357320 | AT1G65810.2 | 35.222 | 1059 | 566 | 26 | 18 | 1052 | 22 | 984 | 7.45e-179 | 565 |
Msa0357320 | AT1G65780.1 | 35.919 | 1083 | 583 | 28 | 18 | 1043 | 11 | 1039 | 1.98e-177 | 563 |
Msa0357320 | AT5G37150.1 | 36.560 | 878 | 464 | 20 | 18 | 870 | 9 | 818 | 3.30e-161 | 512 |
Msa0357320 | AT5G52090.1 | 39.736 | 682 | 357 | 12 | 209 | 870 | 8 | 655 | 9.58e-148 | 470 |
Msa0357320 | AT5G37140.1 | 39.162 | 692 | 371 | 14 | 197 | 870 | 12 | 671 | 4.91e-144 | 460 |
Msa0357320 | AT4G05540.1 | 38.374 | 701 | 357 | 18 | 174 | 837 | 27 | 689 | 1.15e-136 | 440 |
Msa0357320 | AT5G37165.1 | 49.847 | 327 | 160 | 3 | 545 | 868 | 78 | 403 | 1.54e-102 | 335 |
Msa0357320 | AT5G37030.1 | 54.514 | 288 | 126 | 4 | 580 | 864 | 348 | 633 | 8.23e-93 | 315 |
Msa0357320 | AT5G37030.1 | 30.730 | 397 | 195 | 11 | 18 | 401 | 9 | 338 | 3.40e-35 | 144 |
Msa0357320 | AT2G19120.1 | 37.000 | 300 | 181 | 7 | 559 | 855 | 753 | 1047 | 2.36e-48 | 189 |
Msa0357320 | AT4G30100.2 | 36.667 | 300 | 176 | 7 | 559 | 852 | 916 | 1207 | 1.10e-45 | 181 |
Msa0357320 | AT4G30100.1 | 36.667 | 300 | 176 | 7 | 559 | 852 | 916 | 1207 | 1.10e-45 | 181 |
Msa0357320 | AT4G15570.2 | 31.962 | 316 | 210 | 5 | 543 | 856 | 357 | 669 | 3.24e-44 | 173 |
Msa0357320 | AT4G15570.4 | 31.962 | 316 | 210 | 5 | 543 | 856 | 357 | 669 | 3.24e-44 | 173 |
Msa0357320 | AT4G15570.3 | 31.962 | 316 | 210 | 5 | 543 | 856 | 446 | 758 | 4.08e-44 | 174 |
Msa0357320 | AT4G15570.1 | 31.962 | 316 | 210 | 5 | 543 | 856 | 446 | 758 | 4.08e-44 | 174 |
Msa0357320 | AT5G37160.1 | 28.605 | 430 | 247 | 13 | 24 | 418 | 24 | 428 | 8.06e-42 | 161 |
Msa0357320 | AT5G47010.1 | 33.724 | 341 | 190 | 9 | 517 | 846 | 598 | 913 | 3.15e-38 | 157 |
Msa0357320 | AT1G16800.2 | 35.842 | 279 | 159 | 6 | 583 | 848 | 1719 | 1990 | 3.67e-38 | 157 |
Msa0357320 | AT1G16800.3 | 35.842 | 279 | 159 | 6 | 583 | 848 | 1649 | 1920 | 4.28e-38 | 157 |
Msa0357320 | AT1G16800.1 | 35.842 | 279 | 159 | 6 | 583 | 848 | 1607 | 1878 | 4.54e-38 | 157 |
Msa0357320 | AT2G03270.1 | 30.928 | 291 | 167 | 12 | 555 | 829 | 339 | 611 | 2.17e-23 | 107 |
Msa0357320 | AT1G05460.2 | 28.788 | 330 | 190 | 11 | 547 | 842 | 491 | 809 | 5.70e-22 | 103 |
Msa0357320 | AT1G05460.1 | 28.788 | 330 | 190 | 11 | 547 | 842 | 491 | 809 | 1.24e-21 | 103 |
Msa0357320 | AT5G35970.1 | 30.201 | 298 | 176 | 11 | 556 | 834 | 638 | 922 | 2.91e-21 | 101 |
Msa0357320 | AT1G08840.1 | 28.195 | 266 | 161 | 9 | 584 | 833 | 1018 | 1269 | 1.12e-14 | 80.5 |
Msa0357320 | AT1G08840.2 | 28.195 | 266 | 161 | 9 | 584 | 833 | 1037 | 1288 | 1.20e-14 | 80.5 |
Msa0357320 | AT1G08840.4 | 28.195 | 266 | 161 | 9 | 584 | 833 | 1050 | 1301 | 1.38e-14 | 80.1 |
Msa0357320 | AT1G08840.3 | 28.195 | 266 | 161 | 9 | 584 | 833 | 1053 | 1304 | 1.38e-14 | 80.1 |
Find 250 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTTCTTGATAAGTTTC+TGG | 0.062862 | 3_1:+39051095 | None:intergenic |
ATTCTACAATAAAGCTTATT+TGG | 0.079007 | 3_1:-39051801 | Msa0357320:CDS |
AAAGATTCTAAAACAATTTA+AGG | 0.080813 | 3_1:-39049360 | Msa0357320:CDS |
TAGGCATTGTTTATGGATTT+TGG | 0.099052 | 3_1:-39049899 | Msa0357320:CDS |
GCTATTCGTGATTGTCTTTC+TGG | 0.100211 | 3_1:-39051841 | Msa0357320:CDS |
TTTGGAAACAAGCTTATTTC+TGG | 0.135032 | 3_1:+39050582 | None:intergenic |
GTGGAGACTAGTTTGGTTTA+TGG | 0.141597 | 3_1:-39047491 | Msa0357320:CDS |
CCTCCGAATCTGATGATTTA+TGG | 0.150983 | 3_1:-39051918 | Msa0357320:CDS |
GTGCAAGGGCCTTCAATTTA+AGG | 0.163196 | 3_1:-39047276 | Msa0357320:intron |
TGCAAATCATTCACTGATTC+AGG | 0.178217 | 3_1:+39052659 | None:intergenic |
TTTGAAAGGTTAAGTTTATT+TGG | 0.184568 | 3_1:-39050645 | Msa0357320:CDS |
TCATTGCTAGGCATTGTTTA+TGG | 0.202173 | 3_1:-39049906 | Msa0357320:intron |
CTCGAGTTTCTTCCAATAAA+TGG | 0.204479 | 3_1:+39052909 | None:intergenic |
TCTAGAAGATATTTCAAAAT+TGG | 0.224789 | 3_1:-39049249 | Msa0357320:CDS |
ATCTTACAAATACCATTTAT+TGG | 0.237606 | 3_1:-39052921 | Msa0357320:CDS |
TTCTACAATAAAGCTTATTT+GGG | 0.242111 | 3_1:-39051800 | Msa0357320:CDS |
ATTTGTATCTTAACTCATTA+AGG | 0.242316 | 3_1:+39052525 | None:intergenic |
AAGGCCCTTGCACTCTAAAA+TGG | 0.255682 | 3_1:+39047286 | None:intergenic |
GTTTGTAATGAAGCTGGTTT+TGG | 0.261210 | 3_1:-39050678 | Msa0357320:CDS |
AACAAAACAAATCGCCAATT+TGG | 0.267389 | 3_1:+39051623 | None:intergenic |
AACATTACCTGGAGATGTTT+TGG | 0.273184 | 3_1:-39052699 | Msa0357320:CDS |
GTGGCTGTTGAAAGCGTTTA+TGG | 0.276768 | 3_1:-39048589 | Msa0357320:CDS |
TGGGAACATTGGAGGGTTTA+GGG | 0.280701 | 3_1:-39047390 | Msa0357320:CDS |
TGAAGATTTATACAAGAATA+AGG | 0.286280 | 3_1:-39053682 | Msa0357320:intron |
CTCATTCAGGTTGAGAAGAT+TGG | 0.290156 | 3_1:-39052977 | Msa0357320:intron |
GTGGGAACATTGGAGGGTTT+AGG | 0.295908 | 3_1:-39047391 | Msa0357320:CDS |
CTGAAGAGAAGTTCTGTAAT+TGG | 0.300387 | 3_1:+39050066 | None:intergenic |
TGCAGAGATTTGGAAGGTTT+TGG | 0.306462 | 3_1:-39052640 | Msa0357320:CDS |
GCACAACTTCTACTTCCTTT+AGG | 0.312309 | 3_1:-39050952 | Msa0357320:CDS |
GTGAATGATTTGCAGAGATT+TGG | 0.313705 | 3_1:-39052650 | Msa0357320:CDS |
GAAATAATGTCACATATAAA+AGG | 0.314158 | 3_1:-39048094 | Msa0357320:CDS |
AAACTCGGTAATAAACGTTT+TGG | 0.317849 | 3_1:-39049447 | Msa0357320:CDS |
AAAGATAGCTTTAGCCATTT+CGG | 0.322684 | 3_1:+39049780 | None:intergenic |
GCACCTTATGGCAAGGTTGC+AGG | 0.333093 | 3_1:-39052851 | Msa0357320:CDS |
TGTGTTCATTGATGAAGTTC+AGG | 0.340598 | 3_1:-39047840 | Msa0357320:CDS |
AGATTGATCTAATTCTTTCA+TGG | 0.343502 | 3_1:+39049753 | None:intergenic |
GAATCACTTTGTGGCCAAAT+TGG | 0.349067 | 3_1:-39051637 | Msa0357320:CDS |
CGGAAGAAGTTATAAGAATA+TGG | 0.354427 | 3_1:-39050421 | Msa0357320:CDS |
AACTCTGTCAAGTGAATGTT+TGG | 0.355195 | 3_1:+39051045 | None:intergenic |
ATACTACCTTTACAACTTCC+AGG | 0.359585 | 3_1:-39050854 | Msa0357320:CDS |
TTATTTCCTTACAGGTCAAT+AGG | 0.363432 | 3_1:-39048379 | Msa0357320:intron |
TGAGTGTCAACTTTCTTCTA+TGG | 0.366111 | 3_1:-39050804 | Msa0357320:CDS |
TATTCTTTCATAAATGTTGC+CGG | 0.367566 | 3_1:-39050468 | Msa0357320:CDS |
CTCCGAATCTGATGATTTAT+GGG | 0.370064 | 3_1:-39051917 | Msa0357320:CDS |
GCTGCTGTTTACACAACCTT+TGG | 0.373018 | 3_1:+39049477 | None:intergenic |
GAAGAAATCGTGCGCCTTGT+TGG | 0.377349 | 3_1:-39047329 | Msa0357320:CDS |
TACAGTAGGCAATATCTTCC+AGG | 0.381051 | 3_1:-39050507 | Msa0357320:CDS |
TTTAGTACTTGTCCAGCATA+TGG | 0.382651 | 3_1:+39050211 | None:intergenic |
TGTTCATTTGTTAACTCAAA+TGG | 0.386474 | 3_1:+39048721 | None:intergenic |
CTGTAGCATGTTTGAACATT+CGG | 0.391528 | 3_1:+39050525 | None:intergenic |
TCTCTTCTTGATAAGTTTCT+GGG | 0.391767 | 3_1:+39051096 | None:intergenic |
CTGATGTTTGATTTGACATT+GGG | 0.392100 | 3_1:-39048256 | Msa0357320:CDS |
AAAGATTTGAATCATCATAC+TGG | 0.394273 | 3_1:-39048171 | Msa0357320:CDS |
TTACAATGACTATGGCTTCA+TGG | 0.395001 | 3_1:-39053742 | Msa0357320:CDS |
ATCTTTCAATTGCAATGCTC+TGG | 0.395556 | 3_1:+39051321 | None:intergenic |
CAAGGTTGCAGGACTTAAAC+TGG | 0.396535 | 3_1:-39052840 | Msa0357320:CDS |
TAATGCCAGAGGATTCTTCT+TGG | 0.397792 | 3_1:-39051138 | Msa0357320:CDS |
CTCATACACCAAGCACCTTA+TGG | 0.398328 | 3_1:-39052863 | Msa0357320:CDS |
TCCTTGATTGCAATGTTTGT+TGG | 0.398449 | 3_1:+39051691 | None:intergenic |
CTGTATAACTTGAATATTGA+AGG | 0.400438 | 3_1:-39052761 | Msa0357320:CDS |
GTTGAAGGTGGAGACTAGTT+TGG | 0.400621 | 3_1:-39047498 | Msa0357320:CDS |
GAGTCCATCACTCACTATCT+TGG | 0.400903 | 3_1:-39052944 | Msa0357320:CDS |
ATTTGGGGTCCTCCTGGGAC+TGG | 0.401612 | 3_1:-39051784 | Msa0357320:CDS |
CCAGGTGATATGCTGTTGTT+TGG | 0.401768 | 3_1:-39051598 | Msa0357320:CDS |
AATGATAGACTTGATGTTAG+AGG | 0.405269 | 3_1:-39051571 | Msa0357320:CDS |
TGACAATGTTTGGAAGAGTT+TGG | 0.411964 | 3_1:-39049851 | Msa0357320:CDS |
ATATTGAAGGCTGGGAAAAC+AGG | 0.413382 | 3_1:-39052748 | Msa0357320:CDS |
GGCAACATTTATGAAAGAAT+AGG | 0.415373 | 3_1:+39050470 | None:intergenic |
AAGCTTATTTGGGGTCCTCC+TGG | 0.417322 | 3_1:-39051790 | Msa0357320:CDS |
GTGAATGTGAAATCAATTGA+TGG | 0.418723 | 3_1:-39050136 | Msa0357320:CDS |
AAGAAATCGTGCGCCTTGTT+GGG | 0.421241 | 3_1:-39047328 | Msa0357320:CDS |
ACAAGTGGATATATGTTTGT+TGG | 0.424629 | 3_1:+39048301 | None:intergenic |
ACCATGTTTCTTCTTTCAAA+AGG | 0.425023 | 3_1:-39048465 | Msa0357320:intron |
TAGGGAAGATCAAGTAATCT+TGG | 0.425862 | 3_1:-39047372 | Msa0357320:CDS |
CATGAAGGAAAATAATTTGT+TGG | 0.426320 | 3_1:-39047098 | Msa0357320:CDS |
TTGCTTCTTCTCCTTTGAAA+AGG | 0.426422 | 3_1:-39047144 | Msa0357320:CDS |
TTCTCCTTTGAAAAGGCGAT+GGG | 0.427960 | 3_1:-39047137 | Msa0357320:CDS |
ATTCACTTGACAGAGTTGAT+TGG | 0.429132 | 3_1:-39051039 | Msa0357320:CDS |
TTCTGGAGTTTCTGAGAGAA+AGG | 0.429666 | 3_1:-39051351 | Msa0357320:CDS |
GGACTGGAGGTGCTACGTTC+AGG | 0.431216 | 3_1:-39049297 | Msa0357320:CDS |
CCTAGGAGTACATTTGTACT+AGG | 0.432067 | 3_1:-39048679 | Msa0357320:CDS |
CGGCCAGTACGTGTGTAATC+TGG | 0.432524 | 3_1:+39048766 | None:intergenic |
GTGAATTACAGTGGCGATGA+TGG | 0.434161 | 3_1:-39050166 | Msa0357320:CDS |
AGAATGGCGTGATTGATTCC+TGG | 0.437136 | 3_1:+39050836 | None:intergenic |
TTTAAGGTTTGTAATGAAGC+TGG | 0.440489 | 3_1:-39050684 | Msa0357320:intron |
TCCAACAAACATTGCAATCA+AGG | 0.441330 | 3_1:-39051692 | Msa0357320:CDS |
AGAAGATTGATCTTACATCT+TGG | 0.442831 | 3_1:+39047702 | None:intergenic |
GCGCTTCCTGGCCAGCTCAA+TGG | 0.443131 | 3_1:+39048928 | None:intergenic |
GCAACATTTATGAAAGAATA+GGG | 0.443437 | 3_1:+39050471 | None:intergenic |
AAGGCGCACGATTTCTTCCT+TGG | 0.446342 | 3_1:+39047334 | None:intergenic |
GAATTTCCATTGAGCTGGCC+AGG | 0.447514 | 3_1:-39048934 | Msa0357320:CDS |
CTAGAGCAAGGAAGAGGTTG+TGG | 0.447577 | 3_1:-39046985 | Msa0357320:CDS |
GGATTCTTATCTTGTATTCA+CGG | 0.453220 | 3_1:-39048116 | Msa0357320:CDS |
TTGTGAAATGTTATCACAAG+TGG | 0.453309 | 3_1:+39048286 | None:intergenic |
ATCAATCACGCCATTCTTGT+TGG | 0.455018 | 3_1:-39050830 | Msa0357320:CDS |
CTTCTCCTTTGAAAAGGCGA+TGG | 0.455090 | 3_1:-39047138 | Msa0357320:CDS |
AGTCCTGCAACCTTGCCATA+AGG | 0.458867 | 3_1:+39052848 | None:intergenic |
AGAGCTACATTTGTTCTTTG+CGG | 0.460542 | 3_1:+39050031 | None:intergenic |
AGAGCGCCTTACAATGACTA+TGG | 0.460983 | 3_1:-39053750 | Msa0357320:CDS |
ATTCTAAAACAATTTAAGGT+TGG | 0.461529 | 3_1:-39049356 | Msa0357320:CDS |
AGCTTATTTGGGGTCCTCCT+GGG | 0.462087 | 3_1:-39051789 | Msa0357320:CDS |
ATTGTTTGCTGCAAAGCAAA+AGG | 0.464262 | 3_1:-39049182 | Msa0357320:CDS |
GGGGATACAGCTCAAACAAT+TGG | 0.465389 | 3_1:-39047746 | Msa0357320:CDS |
ATCAATTGGGAATTAAAATG+AGG | 0.467717 | 3_1:+39048148 | None:intergenic |
TTCATAGATTGTATAACAAT+AGG | 0.467858 | 3_1:+39047461 | None:intergenic |
GGCATAGTTTCTCCATATGC+TGG | 0.469815 | 3_1:-39050223 | Msa0357320:CDS |
ATCCCATAAATCATCAGATT+CGG | 0.471434 | 3_1:+39051915 | None:intergenic |
AGAACATAACTATAGGTACT+TGG | 0.473489 | 3_1:-39051254 | Msa0357320:CDS |
TCTGATGTTTGATTTGACAT+TGG | 0.474682 | 3_1:-39048257 | Msa0357320:CDS |
TTCAAGAGACGTTGTTTCAA+GGG | 0.474769 | 3_1:-39051204 | Msa0357320:CDS |
AAATTCAATTGACATGTTGA+AGG | 0.475198 | 3_1:-39047513 | Msa0357320:CDS |
AAGATCAAGTAATCTTGGTA+AGG | 0.476025 | 3_1:-39047367 | Msa0357320:CDS |
TAACTTGAATATTGAAGGCT+GGG | 0.481217 | 3_1:-39052756 | Msa0357320:CDS |
TATCTTCCAGGGCCAATGTA+TGG | 0.483128 | 3_1:-39050495 | Msa0357320:CDS |
ATAACTTGAATATTGAAGGC+TGG | 0.484194 | 3_1:-39052757 | Msa0357320:CDS |
AGAAACTTTGTGCAGCCTAA+AGG | 0.488611 | 3_1:+39050937 | None:intergenic |
CCTAGTACAAATGTACTCCT+AGG | 0.488986 | 3_1:+39048679 | None:intergenic |
TTATTAGTGACGTTGAGTCC+TGG | 0.489205 | 3_1:-39048508 | Msa0357320:CDS |
TTTCAAGAGACGTTGTTTCA+AGG | 0.489965 | 3_1:-39051205 | Msa0357320:CDS |
AGATCAAGAGACCGGTGTTA+CGG | 0.491548 | 3_1:-39048534 | Msa0357320:CDS |
TTGCAAATGGGTGGAGACCT+AGG | 0.492496 | 3_1:-39049418 | Msa0357320:CDS |
TTATGCACTCATTTACCAAT+GGG | 0.496233 | 3_1:-39051286 | Msa0357320:CDS |
TTCTGTGCTGCATGTTGAGA+AGG | 0.497973 | 3_1:+39050610 | None:intergenic |
GAACAAATGTAGCTCTTACA+AGG | 0.498795 | 3_1:-39050024 | Msa0357320:CDS |
GTTGAGACAATGAAGGTTGA+AGG | 0.499098 | 3_1:-39046866 | Msa0357320:CDS |
ATCAATCTCTTCTCTTCCAC+CGG | 0.499780 | 3_1:+39050449 | None:intergenic |
GTTTGTTGGAAGATCAGAAA+AGG | 0.502139 | 3_1:+39048315 | None:intergenic |
TGCAAATGGGTGGAGACCTA+GGG | 0.503466 | 3_1:-39049417 | Msa0357320:CDS |
ATGAAGCCATAGTCATTGTA+AGG | 0.503755 | 3_1:+39053744 | None:intergenic |
CTCCTTTGAAAAGGCGATGG+GGG | 0.507076 | 3_1:-39047135 | Msa0357320:CDS |
TGGTAGAATTTCCATTGAGC+TGG | 0.507474 | 3_1:-39048939 | Msa0357320:CDS |
ACACTCATCGCCAACAAGAA+TGG | 0.508254 | 3_1:+39050820 | None:intergenic |
TGTAGCATGGCTTGCTACAA+AGG | 0.508780 | 3_1:-39050260 | Msa0357320:intron |
TTGGGAGAAGCTTATTTGAA+AGG | 0.508811 | 3_1:-39050659 | Msa0357320:CDS |
CAAGAGCTTGTTTCCCAACA+AGG | 0.511125 | 3_1:+39047315 | None:intergenic |
AATAGGAGAATAATGGAAAG+AGG | 0.511693 | 3_1:-39053789 | None:intergenic |
TCATGGAGAACGAGATGATA+AGG | 0.512190 | 3_1:-39051414 | Msa0357320:CDS |
TGAACTAAAACAACTGTATG+TGG | 0.514070 | 3_1:-39047014 | Msa0357320:CDS |
TTGATTCCTGGAAGTTGTAA+AGG | 0.516880 | 3_1:+39050848 | None:intergenic |
GTACTAGGTCGGTCAGGTAC+AGG | 0.517698 | 3_1:-39048664 | Msa0357320:CDS |
GTTATGCACTCATTTACCAA+TGG | 0.517745 | 3_1:-39051287 | Msa0357320:CDS |
GGTTACAACGGTGGGAACAT+TGG | 0.518954 | 3_1:-39047401 | Msa0357320:CDS |
TCACCAGATTACACACGTAC+TGG | 0.519107 | 3_1:-39048769 | Msa0357320:CDS |
ACAACCTTTGGAATGATCTA+CGG | 0.519590 | 3_1:+39049489 | None:intergenic |
CAACCTTGCCATAAGGTGCT+TGG | 0.520426 | 3_1:+39052855 | None:intergenic |
TAGGGACCATACATTGGCCC+TGG | 0.522828 | 3_1:+39050489 | None:intergenic |
ATCGTTAGAGAATCACTTTG+TGG | 0.523252 | 3_1:-39051646 | Msa0357320:CDS |
CAATAGAGATAGTGAAGGAC+TGG | 0.523411 | 3_1:-39049313 | Msa0357320:CDS |
GCCAAAACCAAAACATCTCC+AGG | 0.525677 | 3_1:+39052692 | None:intergenic |
AAATACCAAGAAGAATCCTC+TGG | 0.527799 | 3_1:+39051133 | None:intergenic |
ACAACGGTGGGAACATTGGA+GGG | 0.527945 | 3_1:-39047397 | Msa0357320:CDS |
TGCTGATAAAGACACCGAAA+TGG | 0.529238 | 3_1:-39049794 | Msa0357320:CDS |
ACGTGTGTAATCTGGTGAAA+TGG | 0.530075 | 3_1:+39048774 | None:intergenic |
ATCTTAACTCATTAAGGTCA+AGG | 0.534430 | 3_1:+39052531 | None:intergenic |
TACAACGGTGGGAACATTGG+AGG | 0.535147 | 3_1:-39047398 | Msa0357320:CDS |
TCTCGAGAATCGGAAGAAGA+AGG | 0.535386 | 3_1:-39048206 | Msa0357320:CDS |
GCAGAAATGGTTACAACGGT+GGG | 0.538108 | 3_1:-39047409 | Msa0357320:CDS |
ACTAATAATTGCCGTAACAC+CGG | 0.538246 | 3_1:+39048523 | None:intergenic |
TGTTTCTGATTATCACGTCA+TGG | 0.538639 | 3_1:-39051431 | Msa0357320:CDS |
TGTTCTAAAATGTGACCCAT+TGG | 0.539138 | 3_1:+39051271 | None:intergenic |
TTCTCTAGTTGAGACAATGA+AGG | 0.539182 | 3_1:-39046873 | Msa0357320:CDS |
CTTTAACTAGAGCAAGGAAG+AGG | 0.541846 | 3_1:-39046991 | Msa0357320:CDS |
TTGATCTCTTCACACAGTCC+AGG | 0.546276 | 3_1:+39048490 | None:intergenic |
ACAACCGTGTTCAACAGCTC+AGG | 0.547925 | 3_1:-39051522 | Msa0357320:CDS |
TTCAATTGACATGTTGAAGG+TGG | 0.552139 | 3_1:-39047510 | Msa0357320:CDS |
TTGATCTCCATCGTAGGTTG+AGG | 0.553047 | 3_1:-39047895 | Msa0357320:CDS |
ACGTTCAGGTTCTCAAGATG+TGG | 0.553409 | 3_1:-39049283 | Msa0357320:CDS |
ACATTTGTACTAGGTCGGTC+AGG | 0.555065 | 3_1:-39048670 | Msa0357320:CDS |
TGCTGTTGAGATCAAGAGAC+CGG | 0.556431 | 3_1:-39048542 | Msa0357320:CDS |
ATTGTTATACAATCTATGAA+TGG | 0.556649 | 3_1:-39047458 | Msa0357320:CDS |
GAGCCGTATAAAACATTACC+TGG | 0.556713 | 3_1:-39052710 | Msa0357320:CDS |
TGATATCTCGTTCACCACCT+TGG | 0.558113 | 3_1:+39050110 | None:intergenic |
TCAATAGGTGAGACTGAGAA+TGG | 0.558655 | 3_1:-39048364 | Msa0357320:CDS |
CGTCTCTTGAAATGAGTCAA+GGG | 0.569100 | 3_1:+39051216 | None:intergenic |
TGGAAAGGCTTGCAAATGGG+TGG | 0.571283 | 3_1:-39049427 | Msa0357320:CDS |
AACAAATGTAGCTCTTACAA+GGG | 0.571720 | 3_1:-39050023 | Msa0357320:CDS |
GGCAGAAATGGTTACAACGG+TGG | 0.572779 | 3_1:-39047410 | Msa0357320:CDS |
GTGCTTGATTCCAAGAATCG+TGG | 0.574678 | 3_1:-39049829 | Msa0357320:CDS |
AGCATAAAAGCAGCTGAGAG+TGG | 0.574731 | 3_1:-39048070 | Msa0357320:CDS |
ATTTCGACACTACGTCCCCT+AGG | 0.576847 | 3_1:+39049401 | None:intergenic |
ATTTGTAGAAATGTTGAAGA+GGG | 0.580895 | 3_1:-39047782 | Msa0357320:CDS |
TTGAAGAGACTAGGAACGAA+AGG | 0.581501 | 3_1:-39051391 | Msa0357320:CDS |
GAAGAGGTTGTGGATTTGTG+AGG | 0.581622 | 3_1:-39046975 | Msa0357320:CDS |
AAATCAATTGATGGTTTCCA+AGG | 0.583335 | 3_1:-39050127 | Msa0357320:CDS |
AAATATCTTCTAGAGGCACT+AGG | 0.584691 | 3_1:+39049258 | None:intergenic |
AGATCAAGTAATCTTGGTAA+GGG | 0.588630 | 3_1:-39047366 | Msa0357320:CDS |
TACAGCTCAAACAATTGGAA+GGG | 0.590099 | 3_1:-39047741 | Msa0357320:CDS |
TCAATTGATGGTTTCCAAGG+TGG | 0.591753 | 3_1:-39050124 | Msa0357320:CDS |
ACAAAGGAGAAAGTATCCAT+TGG | 0.592137 | 3_1:-39050244 | Msa0357320:CDS |
ATGATTTGCAGAGATTTGGA+AGG | 0.593297 | 3_1:-39052646 | Msa0357320:CDS |
AGCAACTCTATGCTCAAGCA+TGG | 0.595501 | 3_1:-39052888 | Msa0357320:CDS |
CTGTAATCTAATAATGCCAG+AGG | 0.597320 | 3_1:-39051149 | Msa0357320:CDS |
GTGAAATAGTTACCTTCCCT+AGG | 0.597530 | 3_1:-39048696 | Msa0357320:CDS |
CTAGTACAAATGTACTCCTA+GGG | 0.598368 | 3_1:+39048680 | None:intergenic |
GGAGTACATTTGTACTAGGT+CGG | 0.598595 | 3_1:-39048675 | Msa0357320:CDS |
AAAGAATAGGGACCATACAT+TGG | 0.600931 | 3_1:+39050483 | None:intergenic |
CCAAACAACAGCATATCACC+TGG | 0.607452 | 3_1:+39051598 | None:intergenic |
ACGTCTCTTGAAATGAGTCA+AGG | 0.607988 | 3_1:+39051215 | None:intergenic |
AGATCCAAGATAGTGAGTGA+TGG | 0.608358 | 3_1:+39052940 | None:intergenic |
ATAGTGAGTGATGGACTCAA+AGG | 0.612036 | 3_1:+39052949 | None:intergenic |
GAGGTTGTGGATTTGTGAGG+AGG | 0.612974 | 3_1:-39046972 | Msa0357320:CDS |
ACAGTAGGCAATATCTTCCA+GGG | 0.614126 | 3_1:-39050506 | Msa0357320:CDS |
CAACCGTGTTCAACAGCTCA+GGG | 0.615676 | 3_1:-39051521 | Msa0357320:CDS |
TCTACAATAAAGCTTATTTG+GGG | 0.616573 | 3_1:-39051799 | Msa0357320:CDS |
GGTGATTTAGTTGAGTCTGA+AGG | 0.617618 | 3_1:-39048859 | Msa0357320:CDS |
ATGTTCAAACATGCTACAGT+AGG | 0.617819 | 3_1:-39050521 | Msa0357320:CDS |
TTGTAATTGATCTCCATCGT+AGG | 0.618294 | 3_1:-39047901 | Msa0357320:CDS |
GAGTGGTAAGCTGAGTCGTG+AGG | 0.620826 | 3_1:-39048053 | Msa0357320:CDS |
GGTACTACTAATACAACGAA+GGG | 0.621800 | 3_1:-39048880 | Msa0357320:CDS |
ACAGCTCAAACAATTGGAAG+GGG | 0.621908 | 3_1:-39047740 | Msa0357320:CDS |
ATGTAGCTCTTACAAGGGCT+AGG | 0.622397 | 3_1:-39050018 | Msa0357320:intron |
CATTTGTAGAAATGTTGAAG+AGG | 0.622542 | 3_1:-39047783 | Msa0357320:CDS |
GGAAGAGAAGAGATTGATGA+CGG | 0.622607 | 3_1:-39050444 | Msa0357320:CDS |
ATTCCCTGAGCTGTTGAACA+CGG | 0.622825 | 3_1:+39051518 | None:intergenic |
ATACAGCTCAAACAATTGGA+AGG | 0.624276 | 3_1:-39047742 | Msa0357320:CDS |
ATGATAAGGTTGAAGAGACT+AGG | 0.628362 | 3_1:-39051400 | Msa0357320:CDS |
AATTCACTTCAATATCATCA+CGG | 0.628649 | 3_1:+39048746 | None:intergenic |
TTTCGGTCCTCAACCTACGA+TGG | 0.629683 | 3_1:+39047888 | None:intergenic |
ATGTGGCTTTAACTAGAGCA+AGG | 0.630690 | 3_1:-39046997 | Msa0357320:CDS |
AGTGGACTCTACATCACTGA+TGG | 0.631720 | 3_1:-39052452 | Msa0357320:CDS |
TCTCCTTTGAAAAGGCGATG+GGG | 0.633135 | 3_1:-39047136 | Msa0357320:CDS |
AGGAGAATAATGGAAAGAGG+AGG | 0.633587 | 3_1:-39053786 | None:intergenic |
TACAAATGTACTCCTAGGGA+AGG | 0.633656 | 3_1:+39048684 | None:intergenic |
ATATGGAGAAACTATGCCAA+TGG | 0.634266 | 3_1:+39050228 | None:intergenic |
AAATGAGAAATTACACCATG+TGG | 0.635036 | 3_1:-39048608 | Msa0357320:CDS |
TTTGGCAGAAATGGTTACAA+CGG | 0.635872 | 3_1:-39047413 | Msa0357320:CDS |
ACACCAAGCACCTTATGGCA+AGG | 0.637539 | 3_1:-39052858 | Msa0357320:CDS |
TTTGTGCAACGACGATGATG+GGG | 0.637784 | 3_1:-39052405 | Msa0357320:intron |
CGTTCAGGTTCTCAAGATGT+GGG | 0.638090 | 3_1:-39049282 | Msa0357320:CDS |
AATTCAAGAGAAACTAGCAA+GGG | 0.638178 | 3_1:-39050188 | Msa0357320:CDS |
CCATAAATCATCAGATTCGG+AGG | 0.638599 | 3_1:+39051918 | None:intergenic |
GATTATATATGAGTACATGA+AGG | 0.640035 | 3_1:-39047113 | Msa0357320:CDS |
AATTCCGTAGATCATTCCAA+AGG | 0.644231 | 3_1:-39049493 | Msa0357320:CDS |
TGAGAACGATGGTGAGAACG+TGG | 0.645019 | 3_1:-39052588 | Msa0357320:CDS |
TCTTTCATAAATGTTGCCGG+TGG | 0.646964 | 3_1:-39050465 | Msa0357320:CDS |
AAATTCAAGAGAAACTAGCA+AGG | 0.647839 | 3_1:-39050189 | Msa0357320:CDS |
TAGAGATAGTGAAGGACTGG+AGG | 0.648090 | 3_1:-39049310 | Msa0357320:CDS |
AAACGCTTTCAACAGCCACA+TGG | 0.667918 | 3_1:+39048593 | None:intergenic |
TGGTACTACTAATACAACGA+AGG | 0.673795 | 3_1:-39048881 | Msa0357320:CDS |
AGAGAAGAGATTGATGACGG+CGG | 0.675042 | 3_1:-39050441 | Msa0357320:CDS |
ATGTTTGGCAATTTCCAATG+CGG | 0.677835 | 3_1:+39051060 | None:intergenic |
GAACTTTAGTACTCATGCCG+AGG | 0.678831 | 3_1:-39047585 | Msa0357320:CDS |
GGTAAGGGATGATTCTACCA+AGG | 0.679324 | 3_1:-39047351 | Msa0357320:CDS |
GTGTTCAATAGAGATAGTGA+AGG | 0.681869 | 3_1:-39049318 | Msa0357320:CDS |
ATACTGAAGAATTTGCACAA+AGG | 0.686126 | 3_1:-39050375 | Msa0357320:intron |
TGAAGTTCAGGATCTAACAA+TGG | 0.689609 | 3_1:-39047828 | Msa0357320:CDS |
GCAAATGGGTGGAGACCTAG+GGG | 0.697076 | 3_1:-39049416 | Msa0357320:CDS |
CTAGCAAGGGTGAATTACAG+TGG | 0.708854 | 3_1:-39050175 | Msa0357320:CDS |
GAAAACAGGTTTATTCATCG+AGG | 0.710932 | 3_1:-39052734 | Msa0357320:CDS |
TGGACAGGAGATGAGAACGA+TGG | 0.785264 | 3_1:-39052599 | Msa0357320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTAAAATTACAGTTT+TGG | - | chr3_1:39047104-39047123 | Msa0357320:CDS | 10.0% |
!! | TTTAATACAAGATAAAATGT+AGG | + | chr3_1:39047001-39047020 | None:intergenic | 15.0% |
!! | AAAAAACTAAAACATGTAAA+AGG | - | chr3_1:39047159-39047178 | Msa0357320:CDS | 15.0% |
!! | GAAACAAAAAAAAACAATAA+GGG | + | chr3_1:39047250-39047269 | None:intergenic | 15.0% |
!! | AGAAACAAAAAAAAACAATA+AGG | + | chr3_1:39047251-39047270 | None:intergenic | 15.0% |
!!! | ATTTCCTTACTTAATATTTT+TGG | - | chr3_1:39047280-39047299 | Msa0357320:CDS | 15.0% |
!! | TTTAGATAATTTAGATTTGA+CGG | + | chr3_1:39047322-39047341 | None:intergenic | 15.0% |
!!! | TGATTTTATTTTATGTATGA+TGG | - | chr3_1:39048669-39048688 | Msa0357320:CDS | 15.0% |
!!! | GATTTTATTTTATGTATGAT+GGG | - | chr3_1:39048670-39048689 | Msa0357320:CDS | 15.0% |
!! | TTGCTATAAAAATATGAATT+TGG | + | chr3_1:39050078-39050097 | None:intergenic | 15.0% |
!!! | TTTTTTTTTAAATCATTGCT+AGG | - | chr3_1:39050721-39050740 | Msa0357320:intron | 15.0% |
!!! | AAAGATTCTAAAACAATTTA+AGG | - | chr3_1:39051279-39051298 | Msa0357320:CDS | 15.0% |
!!! | TTAAATTTTAGTTACAGTTA+TGG | - | chr3_1:39051543-39051562 | Msa0357320:CDS | 15.0% |
!! | TCTACAATAATCTAATAATT+TGG | - | chr3_1:39052206-39052225 | Msa0357320:intron | 15.0% |
!! | AGGAAATAAATTAAATTATG+AGG | + | chr3_1:39052249-39052268 | None:intergenic | 15.0% |
!!! | AATTTAATTTATTTCCTTAC+AGG | - | chr3_1:39052252-39052271 | Msa0357320:intron | 15.0% |
!!! | TTTTAAAAACCTTAAATTGA+AGG | + | chr3_1:39053375-39053394 | None:intergenic | 15.0% |
!! | TGAAGATTTATACAAGAATA+AGG | - | chr3_1:39046957-39046976 | Msa0357320:CDS | 20.0% |
!!! | TGTCTTGAATTTTTTAGTTT+TGG | - | chr3_1:39047131-39047150 | Msa0357320:CDS | 20.0% |
!!! | GTCTTGAATTTTTTAGTTTT+GGG | - | chr3_1:39047132-39047151 | Msa0357320:CDS | 20.0% |
!!! | TCTTGAATTTTTTAGTTTTG+GGG | - | chr3_1:39047133-39047152 | Msa0357320:CDS | 20.0% |
!! | AAACAAAAACTATTTCAAAC+AGG | - | chr3_1:39047224-39047243 | Msa0357320:intron | 20.0% |
!!! | ATGTATAAATCTTTATTTGC+TGG | - | chr3_1:39047400-39047419 | Msa0357320:CDS | 20.0% |
!! | GTGTATAAAATTGATATTGT+TGG | - | chr3_1:39047484-39047503 | Msa0357320:CDS | 20.0% |
!! | AATAGATAGACACAAAATTA+AGG | + | chr3_1:39047639-39047658 | None:intergenic | 20.0% |
!! | ATCTTACAAATACCATTTAT+TGG | - | chr3_1:39047718-39047737 | Msa0357320:CDS | 20.0% |
!! | AAACCATTTAACAACAAAAA+CGG | - | chr3_1:39047824-39047843 | Msa0357320:CDS | 20.0% |
!!! | TTATACAGTTTATTTTTGGA+CGG | + | chr3_1:39047866-39047885 | None:intergenic | 20.0% |
!!! | CAAGTTATACAGTTTATTTT+TGG | + | chr3_1:39047870-39047889 | None:intergenic | 20.0% |
!! | ATTTGTATCTTAACTCATTA+AGG | + | chr3_1:39048117-39048136 | None:intergenic | 20.0% |
!! | TTGGATCTTATAGAAAAATA+TGG | - | chr3_1:39048164-39048183 | Msa0357320:CDS | 20.0% |
!! | AGTATATAAGTGAAACTATT+TGG | + | chr3_1:39048349-39048368 | None:intergenic | 20.0% |
!! | TACTAAAACTTTAACAACAA+AGG | + | chr3_1:39048456-39048475 | None:intergenic | 20.0% |
!! | ATTCTACAATAAAGCTTATT+TGG | - | chr3_1:39048838-39048857 | Msa0357320:CDS | 20.0% |
!! | TTCTACAATAAAGCTTATTT+GGG | - | chr3_1:39048839-39048858 | Msa0357320:CDS | 20.0% |
!!! | ACATTTTAGAACATAACTAT+AGG | - | chr3_1:39049378-39049397 | Msa0357320:CDS | 20.0% |
!! | TCACAAATGACAAATAAAAA+TGG | + | chr3_1:39049924-39049943 | None:intergenic | 20.0% |
!! | TTTGAAAGGTTAAGTTTATT+TGG | - | chr3_1:39049994-39050013 | Msa0357320:intron | 20.0% |
!! | TGTACTTCATAAATTATATG+CGG | + | chr3_1:39050333-39050352 | None:intergenic | 20.0% |
!!! | ATTCTAAAACAATTTAAGGT+TGG | - | chr3_1:39051283-39051302 | Msa0357320:CDS | 20.0% |
!!! | AATTTTGAAATATCTTCTAG+AGG | + | chr3_1:39051391-39051410 | None:intergenic | 20.0% |
!! | TCTAGAAGATATTTCAAAAT+TGG | - | chr3_1:39051390-39051409 | Msa0357320:CDS | 20.0% |
!! | GAAATAATGTCACATATAAA+AGG | - | chr3_1:39052545-39052564 | Msa0357320:CDS | 20.0% |
!! | TTCATAGATTGTATAACAAT+AGG | + | chr3_1:39053181-39053200 | None:intergenic | 20.0% |
!! | ATTGTTATACAATCTATGAA+TGG | - | chr3_1:39053181-39053200 | Msa0357320:intron | 20.0% |
!!! | CAATGTTTTATGTTTTTTTC+CGG | - | chr3_1:39053440-39053459 | Msa0357320:intron | 20.0% |
!!! | TCATGGATTTGATTTTTTCT+TGG | - | chr3_1:39046914-39046933 | Msa0357320:CDS | 25.0% |
! | ATATTAAGTAAGGAAATTGC+AGG | + | chr3_1:39047277-39047296 | None:intergenic | 25.0% |
! | GGTACCAAAAATATTAAGTA+AGG | + | chr3_1:39047287-39047306 | None:intergenic | 25.0% |
!! | TTTTATACACACACATTTCT+AGG | + | chr3_1:39047474-39047493 | None:intergenic | 25.0% |
!! | ATGACCATAATTTTGAATTC+TGG | - | chr3_1:39047516-39047535 | Msa0357320:CDS | 25.0% |
! | TCTATCTATTTATCTCATTC+AGG | - | chr3_1:39047649-39047668 | Msa0357320:CDS | 25.0% |
!!! | TTACCGTTTTTGTTGTTAAA+TGG | + | chr3_1:39047830-39047849 | None:intergenic | 25.0% |
!!! | TATACAGTTTATTTTTGGAC+GGG | + | chr3_1:39047865-39047884 | None:intergenic | 25.0% |
! | CTGTATAACTTGAATATTGA+AGG | - | chr3_1:39047878-39047897 | Msa0357320:CDS | 25.0% |
! | TCTTATAGAAAAATATGGAG+TGG | - | chr3_1:39048169-39048188 | Msa0357320:CDS | 25.0% |
! | TAAAACTTTAACAACAAAGG+TGG | + | chr3_1:39048453-39048472 | None:intergenic | 25.0% |
! | TCTACAATAAAGCTTATTTG+GGG | - | chr3_1:39048840-39048859 | Msa0357320:CDS | 25.0% |
! | ACTGGAAAAACAAAAACTTT+AGG | - | chr3_1:39048873-39048892 | Msa0357320:CDS | 25.0% |
!! | AGATATCGAAGATATTTTCT+TGG | - | chr3_1:39049094-39049113 | Msa0357320:intron | 25.0% |
!! | AAATGAATTTTTATCCGCAT+TGG | - | chr3_1:39049565-39049584 | Msa0357320:intron | 25.0% |
!!! | TGTGATTGTTGTTTGTTTTA+AGG | - | chr3_1:39049939-39049958 | Msa0357320:intron | 25.0% |
! | GCAACATTTATGAAAGAATA+GGG | + | chr3_1:39050171-39050190 | None:intergenic | 25.0% |
! | TATTCTTTCATAAATGTTGC+CGG | - | chr3_1:39050171-39050190 | Msa0357320:CDS | 25.0% |
!!! | TGACATATACTTACTTTTCT+TGG | - | chr3_1:39050355-39050374 | Msa0357320:intron | 25.0% |
!!! | AACATTGTCATTTTTAGCTA+GGG | + | chr3_1:39050778-39050797 | None:intergenic | 25.0% |
!!! | AAACATTGTCATTTTTAGCT+AGG | + | chr3_1:39050779-39050798 | None:intergenic | 25.0% |
! | TAGCTAAAAATGACAATGTT+TGG | - | chr3_1:39050778-39050797 | Msa0357320:intron | 25.0% |
! | AGATTGATCTAATTCTTTCA+TGG | + | chr3_1:39050889-39050908 | None:intergenic | 25.0% |
! | ACAATTTATCTGAGTTCATT+CGG | + | chr3_1:39051522-39051541 | None:intergenic | 25.0% |
! | TGCTGAAAAATCAATGATTA+AGG | - | chr3_1:39051815-39051834 | Msa0357320:CDS | 25.0% |
! | AATTCACTTCAATATCATCA+CGG | + | chr3_1:39051896-39051915 | None:intergenic | 25.0% |
!! | TGTTCATTTGTTAACTCAAA+TGG | + | chr3_1:39051921-39051940 | None:intergenic | 25.0% |
! | AAAGATTTGAATCATCATAC+TGG | - | chr3_1:39052468-39052487 | Msa0357320:CDS | 25.0% |
! | ATCAATTGGGAATTAAAATG+AGG | + | chr3_1:39052494-39052513 | None:intergenic | 25.0% |
!! | ATCCAACTTTTTGATCAATT+GGG | + | chr3_1:39052507-39052526 | None:intergenic | 25.0% |
!! | AATCCAACTTTTTGATCAAT+TGG | + | chr3_1:39052508-39052527 | None:intergenic | 25.0% |
! | ACTATGAAAAAATGAAGATG+CGG | - | chr3_1:39052690-39052709 | Msa0357320:CDS | 25.0% |
! | ATTTGTAGAAATGTTGAAGA+GGG | - | chr3_1:39052857-39052876 | Msa0357320:CDS | 25.0% |
!! | AGAATCTAAAAGTCAGTTTT+TGG | - | chr3_1:39052976-39052995 | Msa0357320:intron | 25.0% |
! | AAAAAGAATGAGAAGATGAA+AGG | - | chr3_1:39053001-39053020 | Msa0357320:intron | 25.0% |
! | AAATTCAATTGACATGTTGA+AGG | - | chr3_1:39053126-39053145 | Msa0357320:intron | 25.0% |
!!! | GTTTTTTTCCGGAATTTTTT+AGG | - | chr3_1:39053451-39053470 | Msa0357320:intron | 25.0% |
! | TAACACATCCTAAAAAATTC+CGG | + | chr3_1:39053462-39053481 | None:intergenic | 25.0% |
! | GATTATATATGAGTACATGA+AGG | - | chr3_1:39053526-39053545 | Msa0357320:intron | 25.0% |
!! | CATGAAGGAAAATAATTTGT+TGG | - | chr3_1:39053541-39053560 | Msa0357320:intron | 25.0% |
!! | TTTTCCCAATAAGAAAACAT+GGG | + | chr3_1:39053713-39053732 | None:intergenic | 25.0% |
!!! | TGAACTGCACATTTTAACTT+CGG | - | chr3_1:39047343-39047362 | Msa0357320:CDS | 30.0% |
ATGACTGTAGATATCCAAAA+CGG | - | chr3_1:39047447-39047466 | Msa0357320:CDS | 30.0% | |
ATAACTTGAATATTGAAGGC+TGG | - | chr3_1:39047882-39047901 | Msa0357320:CDS | 30.0% | |
TAACTTGAATATTGAAGGCT+GGG | - | chr3_1:39047883-39047902 | Msa0357320:CDS | 30.0% | |
! | TCTCCAGGTAATGTTTTATA+CGG | + | chr3_1:39047935-39047954 | None:intergenic | 30.0% |
!!! | GGTGTTTTTTGACAATTGTA+TGG | - | chr3_1:39048020-39048039 | Msa0357320:CDS | 30.0% |
! | TTTTTGACAATTGTATGGAC+AGG | - | chr3_1:39048025-39048044 | Msa0357320:CDS | 30.0% |
ATCTTAACTCATTAAGGTCA+AGG | + | chr3_1:39048111-39048130 | None:intergenic | 30.0% | |
!! | GTTGTTTTCTTGACAAATGT+TGG | - | chr3_1:39048145-39048164 | Msa0357320:CDS | 30.0% |
TAGAGTCAAATAATCTGCAT+AGG | - | chr3_1:39048553-39048572 | Msa0357320:CDS | 30.0% | |
!! | GAACTAGTTGATGATGAAAT+TGG | - | chr3_1:39048637-39048656 | Msa0357320:CDS | 30.0% |
!! | TTTTATGTATGATGGGAAAC+AGG | - | chr3_1:39048677-39048696 | Msa0357320:CDS | 30.0% |
ATCCCATAAATCATCAGATT+CGG | + | chr3_1:39048727-39048746 | None:intergenic | 30.0% | |
AACAAAACAAATCGCCAATT+TGG | + | chr3_1:39049019-39049038 | None:intergenic | 30.0% | |
AATGATAGACTTGATGTTAG+AGG | - | chr3_1:39049068-39049087 | Msa0357320:intron | 30.0% | |
!! | GAATGTTTTTCGACTTATAC+TGG | - | chr3_1:39049140-39049159 | Msa0357320:intron | 30.0% |
TTATGCACTCATTTACCAAT+GGG | - | chr3_1:39049353-39049372 | Msa0357320:CDS | 30.0% | |
AGAACATAACTATAGGTACT+TGG | - | chr3_1:39049385-39049404 | Msa0357320:CDS | 30.0% | |
!! | TCTTCTTGGTATTTTGAGAA+TGG | - | chr3_1:39049515-39049534 | Msa0357320:intron | 30.0% |
TCTCTTCTTGATAAGTTTCT+GGG | + | chr3_1:39049546-39049565 | None:intergenic | 30.0% | |
TTCTCTTCTTGATAAGTTTC+TGG | + | chr3_1:39049547-39049566 | None:intergenic | 30.0% | |
! | TATGAAGCCAATGAACTTTT+TGG | - | chr3_1:39049724-39049743 | Msa0357320:intron | 30.0% |
! | TTTAAGGTTTGTAATGAAGC+TGG | - | chr3_1:39049955-39049974 | Msa0357320:intron | 30.0% |
!!! | TTTGTAATGAAGCTGGTTTT+GGG | - | chr3_1:39049962-39049981 | Msa0357320:intron | 30.0% |
TTTGGAAACAAGCTTATTTC+TGG | + | chr3_1:39050060-39050079 | None:intergenic | 30.0% | |
GGCAACATTTATGAAAGAAT+AGG | + | chr3_1:39050172-39050191 | None:intergenic | 30.0% | |
CGGAAGAAGTTATAAGAATA+TGG | - | chr3_1:39050218-39050237 | Msa0357320:CDS | 30.0% | |
ATACTGAAGAATTTGCACAA+AGG | - | chr3_1:39050264-39050283 | Msa0357320:intron | 30.0% | |
AAATTCAAGAGAAACTAGCA+AGG | - | chr3_1:39050450-39050469 | Msa0357320:CDS | 30.0% | |
AATTCAAGAGAAACTAGCAA+GGG | - | chr3_1:39050451-39050470 | Msa0357320:CDS | 30.0% | |
GTGAATGTGAAATCAATTGA+TGG | - | chr3_1:39050503-39050522 | Msa0357320:CDS | 30.0% | |
! | AAATCAATTGATGGTTTCCA+AGG | - | chr3_1:39050512-39050531 | Msa0357320:CDS | 30.0% |
AACAAATGTAGCTCTTACAA+GGG | - | chr3_1:39050616-39050635 | Msa0357320:CDS | 30.0% | |
!! | TAGGCATTGTTTATGGATTT+TGG | - | chr3_1:39050740-39050759 | Msa0357320:intron | 30.0% |
!! | AGGCATTGTTTATGGATTTT+GGG | - | chr3_1:39050741-39050760 | Msa0357320:intron | 30.0% |
AAAGAAAAATCCACGATTCT+TGG | + | chr3_1:39050823-39050842 | None:intergenic | 30.0% | |
ATAAACTTCTACACTTCTTC+AGG | - | chr3_1:39051108-39051127 | Msa0357320:CDS | 30.0% | |
! | AAACTCGGTAATAAACGTTT+TGG | - | chr3_1:39051192-39051211 | Msa0357320:CDS | 30.0% |
ATCCAAAAACTTAAGAGAGT+TGG | - | chr3_1:39051738-39051757 | Msa0357320:CDS | 30.0% | |
! | TACCAACTCTCTTAAGTTTT+TGG | + | chr3_1:39051743-39051762 | None:intergenic | 30.0% |
!! | TGATTTTTCAGCAGCATTAT+TGG | + | chr3_1:39051808-39051827 | None:intergenic | 30.0% |
AAATGAGAAATTACACCATG+TGG | - | chr3_1:39052031-39052050 | Msa0357320:intron | 30.0% | |
ACCATGTTTCTTCTTTCAAA+AGG | - | chr3_1:39052174-39052193 | Msa0357320:intron | 30.0% | |
!! | ACCTTTTGAAAGAAGAAACA+TGG | + | chr3_1:39052178-39052197 | None:intergenic | 30.0% |
! | TTCTTCTTTCAAAAGGTATG+CGG | - | chr3_1:39052181-39052200 | Msa0357320:intron | 30.0% |
TAAATTATGAGGCAAGAGTT+CGG | + | chr3_1:39052238-39052257 | None:intergenic | 30.0% | |
TTATTTCCTTACAGGTCAAT+AGG | - | chr3_1:39052260-39052279 | Msa0357320:intron | 30.0% | |
ACAAGTGGATATATGTTTGT+TGG | + | chr3_1:39052341-39052360 | None:intergenic | 30.0% | |
TTGTGAAATGTTATCACAAG+TGG | + | chr3_1:39052356-39052375 | None:intergenic | 30.0% | |
!! | TCTGATGTTTGATTTGACAT+TGG | - | chr3_1:39052382-39052401 | Msa0357320:intron | 30.0% |
!! | CTGATGTTTGATTTGACATT+GGG | - | chr3_1:39052383-39052402 | Msa0357320:intron | 30.0% |
TTCCCAATTGATCAAAAAGT+TGG | - | chr3_1:39052502-39052521 | Msa0357320:CDS | 30.0% | |
GGATTCTTATCTTGTATTCA+CGG | - | chr3_1:39052523-39052542 | Msa0357320:CDS | 30.0% | |
! | TACATCACCCTTGTATTTTT+CGG | + | chr3_1:39052771-39052790 | None:intergenic | 30.0% |
CATTTGTAGAAATGTTGAAG+AGG | - | chr3_1:39052856-39052875 | Msa0357320:CDS | 30.0% | |
AGAAGATTGATCTTACATCT+TGG | + | chr3_1:39052940-39052959 | None:intergenic | 30.0% | |
! | AATCCGATTCTGACAATTTT+TGG | - | chr3_1:39053208-39053227 | Msa0357320:intron | 30.0% |
AAGATCAAGTAATCTTGGTA+AGG | - | chr3_1:39053272-39053291 | Msa0357320:intron | 30.0% | |
AGATCAAGTAATCTTGGTAA+GGG | - | chr3_1:39053273-39053292 | Msa0357320:intron | 30.0% | |
!!! | TTTAACCATTTTAGAGTGCA+AGG | - | chr3_1:39053348-39053367 | Msa0357320:intron | 30.0% |
!!! | TTAACCATTTTAGAGTGCAA+GGG | - | chr3_1:39053349-39053368 | Msa0357320:intron | 30.0% |
TGAACTAAAACAACTGTATG+TGG | - | chr3_1:39053625-39053644 | Msa0357320:intron | 30.0% | |
! | TAAGCCCATGTTTTCTTATT+GGG | - | chr3_1:39053706-39053725 | Msa0357320:CDS | 30.0% |
! | CTTTTCCCAATAAGAAAACA+TGG | + | chr3_1:39053714-39053733 | None:intergenic | 30.0% |
ATGAAGCCATAGTCATTGTA+AGG | + | chr3_1:39046898-39046917 | None:intergenic | 35.0% | |
TTACAATGACTATGGCTTCA+TGG | - | chr3_1:39046897-39046916 | Msa0357320:CDS | 35.0% | |
GGTGCCAGAATTCAAAATTA+TGG | + | chr3_1:39047523-39047542 | None:intergenic | 35.0% | |
GCACCAATATAACTGTTTCA+GGG | - | chr3_1:39047538-39047557 | Msa0357320:CDS | 35.0% | |
CACCAATATAACTGTTTCAG+GGG | - | chr3_1:39047539-39047558 | Msa0357320:CDS | 35.0% | |
AACCCCTGAAACAGTTATAT+TGG | + | chr3_1:39047544-39047563 | None:intergenic | 35.0% | |
CTCGAGTTTCTTCCAATAAA+TGG | + | chr3_1:39047733-39047752 | None:intergenic | 35.0% | |
GAAAACAGGTTTATTCATCG+AGG | - | chr3_1:39047905-39047924 | Msa0357320:CDS | 35.0% | |
! | AACATTACCTGGAGATGTTT+TGG | - | chr3_1:39047940-39047959 | Msa0357320:CDS | 35.0% |
!! | TGCAAATCATTCACTGATTC+AGG | + | chr3_1:39047983-39048002 | None:intergenic | 35.0% |
! | GTGAATGATTTGCAGAGATT+TGG | - | chr3_1:39047989-39048008 | Msa0357320:CDS | 35.0% |
! | ATGATTTGCAGAGATTTGGA+AGG | - | chr3_1:39047993-39048012 | Msa0357320:CDS | 35.0% |
AGTTAAGTCTCAGATGAGTT+GGG | + | chr3_1:39048392-39048411 | None:intergenic | 35.0% | |
TAGTTAAGTCTCAGATGAGT+TGG | + | chr3_1:39048393-39048412 | None:intergenic | 35.0% | |
CTCCGAATCTGATGATTTAT+GGG | - | chr3_1:39048722-39048741 | Msa0357320:CDS | 35.0% | |
TCCAACAAACATTGCAATCA+AGG | - | chr3_1:39048947-39048966 | Msa0357320:intron | 35.0% | |
TCCTTGATTGCAATGTTTGT+TGG | + | chr3_1:39048951-39048970 | None:intergenic | 35.0% | |
ATCGTTAGAGAATCACTTTG+TGG | - | chr3_1:39048993-39049012 | Msa0357320:intron | 35.0% | |
!! | GTTTTTCGACTTATACTGGA+TGG | - | chr3_1:39049144-39049163 | Msa0357320:intron | 35.0% |
! | TGTTTCTGATTATCACGTCA+TGG | - | chr3_1:39049208-39049227 | Msa0357320:CDS | 35.0% |
ATGATAAGGTTGAAGAGACT+AGG | - | chr3_1:39049239-39049258 | Msa0357320:CDS | 35.0% | |
ATCTTTCAATTGCAATGCTC+TGG | + | chr3_1:39049321-39049340 | None:intergenic | 35.0% | |
GTTATGCACTCATTTACCAA+TGG | - | chr3_1:39049352-39049371 | Msa0357320:CDS | 35.0% | |
!! | TGTTCTAAAATGTGACCCAT+TGG | + | chr3_1:39049371-39049390 | None:intergenic | 35.0% |
! | TTTCAAGAGACGTTGTTTCA+AGG | - | chr3_1:39049434-39049453 | Msa0357320:CDS | 35.0% |
! | TTCAAGAGACGTTGTTTCAA+GGG | - | chr3_1:39049435-39049454 | Msa0357320:CDS | 35.0% |
CTGTAATCTAATAATGCCAG+AGG | - | chr3_1:39049490-39049509 | Msa0357320:CDS | 35.0% | |
AAATACCAAGAAGAATCCTC+TGG | + | chr3_1:39049509-39049528 | None:intergenic | 35.0% | |
ATGTTTGGCAATTTCCAATG+CGG | + | chr3_1:39049582-39049601 | None:intergenic | 35.0% | |
AACTCTGTCAAGTGAATGTT+TGG | + | chr3_1:39049597-39049616 | None:intergenic | 35.0% | |
! | ATTCACTTGACAGAGTTGAT+TGG | - | chr3_1:39049600-39049619 | Msa0357320:intron | 35.0% |
TCGATCACCAAAAAGTTCAT+TGG | + | chr3_1:39049734-39049753 | None:intergenic | 35.0% | |
ATACTACCTTTACAACTTCC+AGG | - | chr3_1:39049785-39049804 | Msa0357320:CDS | 35.0% | |
TTGATTCCTGGAAGTTGTAA+AGG | + | chr3_1:39049794-39049813 | None:intergenic | 35.0% | |
TGAGTGTCAACTTTCTTCTA+TGG | - | chr3_1:39049835-39049854 | Msa0357320:CDS | 35.0% | |
!! | GTTTGTAATGAAGCTGGTTT+TGG | - | chr3_1:39049961-39049980 | Msa0357320:intron | 35.0% |
TTGGGAGAAGCTTATTTGAA+AGG | - | chr3_1:39049980-39049999 | Msa0357320:intron | 35.0% | |
! | TGCATGTTGAGAAGGTTTTT+CGG | + | chr3_1:39050024-39050043 | None:intergenic | 35.0% |
CTGTAGCATGTTTGAACATT+CGG | + | chr3_1:39050117-39050136 | None:intergenic | 35.0% | |
ATGTTCAAACATGCTACAGT+AGG | - | chr3_1:39050118-39050137 | Msa0357320:CDS | 35.0% | |
AAAGAATAGGGACCATACAT+TGG | + | chr3_1:39050159-39050178 | None:intergenic | 35.0% | |
CATGTGAGAAATTGCGAAAA+AGG | + | chr3_1:39050295-39050314 | None:intergenic | 35.0% | |
! | TACTTTTCTTGGTTGTAGCA+TGG | - | chr3_1:39050366-39050385 | Msa0357320:intron | 35.0% |
!! | ACAAAGGAGAAAGTATCCAT+TGG | - | chr3_1:39050395-39050414 | Msa0357320:CDS | 35.0% |
ATATGGAGAAACTATGCCAA+TGG | + | chr3_1:39050414-39050433 | None:intergenic | 35.0% | |
TTTAGTACTTGTCCAGCATA+TGG | + | chr3_1:39050431-39050450 | None:intergenic | 35.0% | |
CTGAAGAGAAGTTCTGTAAT+TGG | + | chr3_1:39050576-39050595 | None:intergenic | 35.0% | |
AGAGCTACATTTGTTCTTTG+CGG | + | chr3_1:39050611-39050630 | None:intergenic | 35.0% | |
GAACAAATGTAGCTCTTACA+AGG | - | chr3_1:39050615-39050634 | Msa0357320:CDS | 35.0% | |
! | TCATTGCTAGGCATTGTTTA+TGG | - | chr3_1:39050733-39050752 | Msa0357320:intron | 35.0% |
! | GGCATTGTTTATGGATTTTG+GGG | - | chr3_1:39050742-39050761 | Msa0357320:intron | 35.0% |
TGACAATGTTTGGAAGAGTT+TGG | - | chr3_1:39050788-39050807 | Msa0357320:intron | 35.0% | |
AATTCCGTAGATCATTCCAA+AGG | - | chr3_1:39051146-39051165 | Msa0357320:CDS | 35.0% | |
!! | ACAACCTTTGGAATGATCTA+CGG | + | chr3_1:39051153-39051172 | None:intergenic | 35.0% |
!!! | CGGTAATAAACGTTTTGGAA+AGG | - | chr3_1:39051197-39051216 | Msa0357320:CDS | 35.0% |
!! | TTTTGGAAAGGCTTGCAAAT+GGG | - | chr3_1:39051209-39051228 | Msa0357320:CDS | 35.0% |
GTGTTCAATAGAGATAGTGA+AGG | - | chr3_1:39051321-39051340 | Msa0357320:CDS | 35.0% | |
!! | AAATATCTTCTAGAGGCACT+AGG | + | chr3_1:39051384-39051403 | None:intergenic | 35.0% |
! | ATTGTTTGCTGCAAAGCAAA+AGG | - | chr3_1:39051457-39051476 | Msa0357320:CDS | 35.0% |
!! | TGCAAAGCAAAAGGTTTTGA+TGG | - | chr3_1:39051466-39051485 | Msa0357320:CDS | 35.0% |
!! | GCAAAGCAAAAGGTTTTGAT+GGG | - | chr3_1:39051467-39051486 | Msa0357320:CDS | 35.0% |
CCAAATCATGGATTCAATTG+AGG | + | chr3_1:39051614-39051633 | None:intergenic | 35.0% | |
CCTCAATTGAATCCATGATT+TGG | - | chr3_1:39051611-39051630 | Msa0357320:CDS | 35.0% | |
!! | TTGAATCCATGATTTGGTTG+TGG | - | chr3_1:39051617-39051636 | Msa0357320:CDS | 35.0% |
AGAGAATAGAGTCATAGTTC+TGG | + | chr3_1:39051649-39051668 | None:intergenic | 35.0% | |
! | ACTCCTCTTTCTTTTTGAAC+AGG | - | chr3_1:39051676-39051695 | Msa0357320:CDS | 35.0% |
CATCCTGTTCAAAAAGAAAG+AGG | + | chr3_1:39051682-39051701 | None:intergenic | 35.0% | |
! | CTCTTTCTTTTTGAACAGGA+TGG | - | chr3_1:39051680-39051699 | Msa0357320:CDS | 35.0% |
TGGTACTACTAATACAACGA+AGG | - | chr3_1:39051758-39051777 | Msa0357320:CDS | 35.0% | |
GGTACTACTAATACAACGAA+GGG | - | chr3_1:39051759-39051778 | Msa0357320:CDS | 35.0% | |
CTAGTACAAATGTACTCCTA+GGG | + | chr3_1:39051962-39051981 | None:intergenic | 35.0% | |
! | CTCATTTTGAATCAGCTTAG+TGG | + | chr3_1:39052018-39052037 | None:intergenic | 35.0% |
ACTAATAATTGCCGTAACAC+CGG | + | chr3_1:39052119-39052138 | None:intergenic | 35.0% | |
! | GTTTGTTGGAAGATCAGAAA+AGG | + | chr3_1:39052327-39052346 | None:intergenic | 35.0% |
! | GATTTTCTGATCTCGAGAAT+CGG | - | chr3_1:39052423-39052442 | Msa0357320:CDS | 35.0% |
TGAAAAAATGAAGATGCGGA+AGG | - | chr3_1:39052694-39052713 | Msa0357320:CDS | 35.0% | |
GAAAAAATGAAGATGCGGAA+GGG | - | chr3_1:39052695-39052714 | Msa0357320:CDS | 35.0% | |
TTGTAATTGATCTCCATCGT+AGG | - | chr3_1:39052738-39052757 | Msa0357320:CDS | 35.0% | |
TTGAGGACCGAAAAATACAA+GGG | - | chr3_1:39052761-39052780 | Msa0357320:CDS | 35.0% | |
TGTGTTCATTGATGAAGTTC+AGG | - | chr3_1:39052799-39052818 | Msa0357320:CDS | 35.0% | |
TGAAGTTCAGGATCTAACAA+TGG | - | chr3_1:39052811-39052830 | Msa0357320:CDS | 35.0% | |
!! | AAGAGGGTTTTGTGTTTTGT+GGG | - | chr3_1:39052873-39052892 | Msa0357320:CDS | 35.0% |
ATACAGCTCAAACAATTGGA+AGG | - | chr3_1:39052897-39052916 | Msa0357320:CDS | 35.0% | |
TACAGCTCAAACAATTGGAA+GGG | - | chr3_1:39052898-39052917 | Msa0357320:CDS | 35.0% | |
!! | TTGTGACAATTTTAGCACCT+CGG | + | chr3_1:39053074-39053093 | None:intergenic | 35.0% |
TTCAATTGACATGTTGAAGG+TGG | - | chr3_1:39053129-39053148 | Msa0357320:intron | 35.0% | |
CTGCCAAAAATTGTCAGAAT+CGG | + | chr3_1:39053214-39053233 | None:intergenic | 35.0% | |
!!! | CTGACAATTTTTGGCAGAAA+TGG | - | chr3_1:39053217-39053236 | Msa0357320:intron | 35.0% |
TTTGGCAGAAATGGTTACAA+CGG | - | chr3_1:39053226-39053245 | Msa0357320:intron | 35.0% | |
TAGGGAAGATCAAGTAATCT+TGG | - | chr3_1:39053267-39053286 | Msa0357320:intron | 35.0% | |
! | TTGCTTCTTCTCCTTTGAAA+AGG | - | chr3_1:39053495-39053514 | Msa0357320:intron | 35.0% |
! | CTAAGCCCATGTTTTCTTAT+TGG | - | chr3_1:39053705-39053724 | Msa0357320:CDS | 35.0% |
TTCTCTAGTTGAGACAATGA+AGG | - | chr3_1:39053766-39053785 | Msa0357320:CDS | 35.0% | |
!!! | ACACATTTCTAGGACCGTTT+TGG | + | chr3_1:39047464-39047483 | None:intergenic | 40.0% |
GGCACCAATATAACTGTTTC+AGG | - | chr3_1:39047537-39047556 | Msa0357320:CDS | 40.0% | |
!! | CTCATTCAGGTTGAGAAGAT+TGG | - | chr3_1:39047662-39047681 | Msa0357320:CDS | 40.0% |
!! | ATAGTGAGTGATGGACTCAA+AGG | + | chr3_1:39047693-39047712 | None:intergenic | 40.0% |
AGATCCAAGATAGTGAGTGA+TGG | + | chr3_1:39047702-39047721 | None:intergenic | 40.0% | |
ATATTGAAGGCTGGGAAAAC+AGG | - | chr3_1:39047891-39047910 | Msa0357320:CDS | 40.0% | |
GAGCCGTATAAAACATTACC+TGG | - | chr3_1:39047929-39047948 | Msa0357320:CDS | 40.0% | |
!!! | ACCTGGAGATGTTTTGGTTT+TGG | - | chr3_1:39047946-39047965 | Msa0357320:CDS | 40.0% |
! | TGCAGAGATTTGGAAGGTTT+TGG | - | chr3_1:39047999-39048018 | Msa0357320:CDS | 40.0% |
! | ATTTTGTGCAACGACGATGA+TGG | - | chr3_1:39048232-39048251 | Msa0357320:CDS | 40.0% |
! | TTTTGTGCAACGACGATGAT+GGG | - | chr3_1:39048233-39048252 | Msa0357320:CDS | 40.0% |
CCATAAATCATCAGATTCGG+AGG | + | chr3_1:39048724-39048743 | None:intergenic | 40.0% | |
CCTCCGAATCTGATGATTTA+TGG | - | chr3_1:39048721-39048740 | Msa0357320:CDS | 40.0% | |
GCTATTCGTGATTGTCTTTC+TGG | - | chr3_1:39048798-39048817 | Msa0357320:CDS | 40.0% | |
!!! | GTTTTTGTTTTTCCAGTCCC+AGG | + | chr3_1:39048870-39048889 | None:intergenic | 40.0% |
GAATCACTTTGTGGCCAAAT+TGG | - | chr3_1:39049002-39049021 | Msa0357320:intron | 40.0% | |
TCATGGAGAACGAGATGATA+AGG | - | chr3_1:39049225-39049244 | Msa0357320:CDS | 40.0% | |
TTGAAGAGACTAGGAACGAA+AGG | - | chr3_1:39049248-39049267 | Msa0357320:CDS | 40.0% | |
! | TTTTCAGCAGAAGTCGTTTC+TGG | - | chr3_1:39049271-39049290 | Msa0357320:CDS | 40.0% |
!! | TTCTGGAGTTTCTGAGAGAA+AGG | - | chr3_1:39049288-39049307 | Msa0357320:CDS | 40.0% |
CGTCTCTTGAAATGAGTCAA+GGG | + | chr3_1:39049426-39049445 | None:intergenic | 40.0% | |
ACGTCTCTTGAAATGAGTCA+AGG | + | chr3_1:39049427-39049446 | None:intergenic | 40.0% | |
TAATGCCAGAGGATTCTTCT+TGG | - | chr3_1:39049501-39049520 | Msa0357320:CDS | 40.0% | |
GCACAACTTCTACTTCCTTT+AGG | - | chr3_1:39049687-39049706 | Msa0357320:intron | 40.0% | |
AGAAACTTTGTGCAGCCTAA+AGG | + | chr3_1:39049705-39049724 | None:intergenic | 40.0% | |
ATCAATCACGCCATTCTTGT+TGG | - | chr3_1:39049809-39049828 | Msa0357320:CDS | 40.0% | |
! | GCATGTTGAGAAGGTTTTTC+GGG | + | chr3_1:39050023-39050042 | None:intergenic | 40.0% |
TACAGTAGGCAATATCTTCC+AGG | - | chr3_1:39050132-39050151 | Msa0357320:CDS | 40.0% | |
ACAGTAGGCAATATCTTCCA+GGG | - | chr3_1:39050133-39050152 | Msa0357320:CDS | 40.0% | |
TCTTTCATAAATGTTGCCGG+TGG | - | chr3_1:39050174-39050193 | Msa0357320:CDS | 40.0% | |
ATCAATCTCTTCTCTTCCAC+CGG | + | chr3_1:39050193-39050212 | None:intergenic | 40.0% | |
GGAAGAGAAGAGATTGATGA+CGG | - | chr3_1:39050195-39050214 | Msa0357320:CDS | 40.0% | |
! | TCAATTGATGGTTTCCAAGG+TGG | - | chr3_1:39050515-39050534 | Msa0357320:CDS | 40.0% |
ACAGCAGCAAAGCAAAAACT+CGG | - | chr3_1:39051177-39051196 | Msa0357320:CDS | 40.0% | |
!!! | GTTTTGGAAAGGCTTGCAAA+TGG | - | chr3_1:39051208-39051227 | Msa0357320:CDS | 40.0% |
CAATAGAGATAGTGAAGGAC+TGG | - | chr3_1:39051326-39051345 | Msa0357320:CDS | 40.0% | |
!! | AATCCATGATTTGGTTGTGG+AGG | - | chr3_1:39051620-39051639 | Msa0357320:CDS | 40.0% |
!! | GAATAGAGTCATAGTTCTGG+AGG | + | chr3_1:39051646-39051665 | None:intergenic | 40.0% |
TGGTAGAATTTCCATTGAGC+TGG | - | chr3_1:39051700-39051719 | Msa0357320:CDS | 40.0% | |
! | TTTTGGATATTTGCGCTTCC+TGG | + | chr3_1:39051726-39051745 | None:intergenic | 40.0% |
GGTGATTTAGTTGAGTCTGA+AGG | - | chr3_1:39051780-39051799 | Msa0357320:CDS | 40.0% | |
ACGTGTGTAATCTGGTGAAA+TGG | + | chr3_1:39051868-39051887 | None:intergenic | 40.0% | |
GTGAAATAGTTACCTTCCCT+AGG | - | chr3_1:39051943-39051962 | Msa0357320:CDS | 40.0% | |
TACAAATGTACTCCTAGGGA+AGG | + | chr3_1:39051958-39051977 | None:intergenic | 40.0% | |
CCTAGTACAAATGTACTCCT+AGG | + | chr3_1:39051963-39051982 | None:intergenic | 40.0% | |
! | CCTAGGAGTACATTTGTACT+AGG | - | chr3_1:39051960-39051979 | Msa0357320:intron | 40.0% |
GGAGTACATTTGTACTAGGT+CGG | - | chr3_1:39051964-39051983 | Msa0357320:intron | 40.0% | |
TTATTAGTGACGTTGAGTCC+TGG | - | chr3_1:39052131-39052150 | Msa0357320:intron | 40.0% | |
TCAATAGGTGAGACTGAGAA+TGG | - | chr3_1:39052275-39052294 | Msa0357320:intron | 40.0% | |
GTTGAGGACCGAAAAATACA+AGG | - | chr3_1:39052760-39052779 | Msa0357320:CDS | 40.0% | |
!! | GAAGAGGGTTTTGTGTTTTG+TGG | - | chr3_1:39052872-39052891 | Msa0357320:CDS | 40.0% |
!! | AGAGGGTTTTGTGTTTTGTG+GGG | - | chr3_1:39052874-39052893 | Msa0357320:CDS | 40.0% |
ACAGCTCAAACAATTGGAAG+GGG | - | chr3_1:39052899-39052918 | Msa0357320:CDS | 40.0% | |
!! | GTGGAGACTAGTTTGGTTTA+TGG | - | chr3_1:39053148-39053167 | Msa0357320:intron | 40.0% |
! | TTCTCCTTTGAAAAGGCGAT+GGG | - | chr3_1:39053502-39053521 | Msa0357320:intron | 40.0% |
!! | ATGTGGCTTTAACTAGAGCA+AGG | - | chr3_1:39053642-39053661 | Msa0357320:intron | 40.0% |
CTTTAACTAGAGCAAGGAAG+AGG | - | chr3_1:39053648-39053667 | Msa0357320:intron | 40.0% | |
GTTGAGACAATGAAGGTTGA+AGG | - | chr3_1:39053773-39053792 | Msa0357320:CDS | 40.0% | |
! | AGAGCGCCTTACAATGACTA+TGG | - | chr3_1:39046889-39046908 | Msa0357320:CDS | 45.0% |
ATTTGACGGTCAAGATCACG+TGG | + | chr3_1:39047308-39047327 | None:intergenic | 45.0% | |
GAGTCCATCACTCACTATCT+TGG | - | chr3_1:39047695-39047714 | Msa0357320:CDS | 45.0% | |
AGCAACTCTATGCTCAAGCA+TGG | - | chr3_1:39047751-39047770 | Msa0357320:CDS | 45.0% | |
CTCATACACCAAGCACCTTA+TGG | - | chr3_1:39047776-39047795 | Msa0357320:CDS | 45.0% | |
CAAGGTTGCAGGACTTAAAC+TGG | - | chr3_1:39047799-39047818 | Msa0357320:CDS | 45.0% | |
GCCAAAACCAAAACATCTCC+AGG | + | chr3_1:39047950-39047969 | None:intergenic | 45.0% | |
! | AGTGGACTCTACATCACTGA+TGG | - | chr3_1:39048187-39048206 | Msa0357320:CDS | 45.0% |
TTTGTGCAACGACGATGATG+GGG | - | chr3_1:39048234-39048253 | Msa0357320:CDS | 45.0% | |
!! | ACGATGATGGGGTAAGAAAC+TGG | - | chr3_1:39048245-39048264 | Msa0357320:CDS | 45.0% |
!! | TTTGTTTTTCCAGTCCCAGG+AGG | + | chr3_1:39048867-39048886 | None:intergenic | 45.0% |
!!! | GGCGATTTGTTTTGTTCTCC+AGG | - | chr3_1:39049023-39049042 | Msa0357320:intron | 45.0% |
CCAAACAACAGCATATCACC+TGG | + | chr3_1:39049044-39049063 | None:intergenic | 45.0% | |
CCAGGTGATATGCTGTTGTT+TGG | - | chr3_1:39049041-39049060 | Msa0357320:intron | 45.0% | |
ATTCCCTGAGCTGTTGAACA+CGG | + | chr3_1:39049124-39049143 | None:intergenic | 45.0% | |
! | AGAATGGCGTGATTGATTCC+TGG | + | chr3_1:39049806-39049825 | None:intergenic | 45.0% |
ACACTCATCGCCAACAAGAA+TGG | + | chr3_1:39049822-39049841 | None:intergenic | 45.0% | |
TTCTGTGCTGCATGTTGAGA+AGG | + | chr3_1:39050032-39050051 | None:intergenic | 45.0% | |
TATCTTCCAGGGCCAATGTA+TGG | - | chr3_1:39050144-39050163 | Msa0357320:CDS | 45.0% | |
!! | AGAGAAGAGATTGATGACGG+CGG | - | chr3_1:39050198-39050217 | Msa0357320:CDS | 45.0% |
!! | TGTAGCATGGCTTGCTACAA+AGG | - | chr3_1:39050379-39050398 | Msa0357320:CDS | 45.0% |
GGCATAGTTTCTCCATATGC+TGG | - | chr3_1:39050416-39050435 | Msa0357320:CDS | 45.0% | |
CTAGCAAGGGTGAATTACAG+TGG | - | chr3_1:39050464-39050483 | Msa0357320:CDS | 45.0% | |
GTGAATTACAGTGGCGATGA+TGG | - | chr3_1:39050473-39050492 | Msa0357320:CDS | 45.0% | |
TGATATCTCGTTCACCACCT+TGG | + | chr3_1:39050532-39050551 | None:intergenic | 45.0% | |
ATGTAGCTCTTACAAGGGCT+AGG | - | chr3_1:39050621-39050640 | Msa0357320:CDS | 45.0% | |
GTGCTTGATTCCAAGAATCG+TGG | - | chr3_1:39050810-39050829 | Msa0357320:CDS | 45.0% | |
! | GCTGCTGTTTACACAACCTT+TGG | + | chr3_1:39051165-39051184 | None:intergenic | 45.0% |
TAGAGATAGTGAAGGACTGG+AGG | - | chr3_1:39051329-39051348 | Msa0357320:CDS | 45.0% | |
! | ACGTTCAGGTTCTCAAGATG+TGG | - | chr3_1:39051356-39051375 | Msa0357320:CDS | 45.0% |
! | CGTTCAGGTTCTCAAGATGT+GGG | - | chr3_1:39051357-39051376 | Msa0357320:CDS | 45.0% |
GGATTCAATTGAGGCTGCAT+CGG | + | chr3_1:39051605-39051624 | None:intergenic | 45.0% | |
TCACCAGATTACACACGTAC+TGG | - | chr3_1:39051870-39051889 | Msa0357320:CDS | 45.0% | |
ACATTTGTACTAGGTCGGTC+AGG | - | chr3_1:39051969-39051988 | Msa0357320:intron | 45.0% | |
AAACGCTTTCAACAGCCACA+TGG | + | chr3_1:39052049-39052068 | None:intergenic | 45.0% | |
!! | GTGGCTGTTGAAAGCGTTTA+TGG | - | chr3_1:39052050-39052069 | Msa0357320:intron | 45.0% |
TGCTGTTGAGATCAAGAGAC+CGG | - | chr3_1:39052097-39052116 | Msa0357320:intron | 45.0% | |
! | AGATCAAGAGACCGGTGTTA+CGG | - | chr3_1:39052105-39052124 | Msa0357320:intron | 45.0% |
TTGATCTCTTCACACAGTCC+AGG | + | chr3_1:39052152-39052171 | None:intergenic | 45.0% | |
GTCTCACCTATTGACCTGTA+AGG | + | chr3_1:39052269-39052288 | None:intergenic | 45.0% | |
TCTCGAGAATCGGAAGAAGA+AGG | - | chr3_1:39052433-39052452 | Msa0357320:CDS | 45.0% | |
AGCATAAAAGCAGCTGAGAG+TGG | - | chr3_1:39052569-39052588 | Msa0357320:CDS | 45.0% | |
TTGATCTCCATCGTAGGTTG+AGG | - | chr3_1:39052744-39052763 | Msa0357320:CDS | 45.0% | |
GGGGATACAGCTCAAACAAT+TGG | - | chr3_1:39052893-39052912 | Msa0357320:CDS | 45.0% | |
GAACTTTAGTACTCATGCCG+AGG | - | chr3_1:39053054-39053073 | Msa0357320:intron | 45.0% | |
! | GTTGAAGGTGGAGACTAGTT+TGG | - | chr3_1:39053141-39053160 | Msa0357320:intron | 45.0% |
GCAGAAATGGTTACAACGGT+GGG | - | chr3_1:39053230-39053249 | Msa0357320:intron | 45.0% | |
TGGGAACATTGGAGGGTTTA+GGG | - | chr3_1:39053249-39053268 | Msa0357320:intron | 45.0% | |
GGTAAGGGATGATTCTACCA+AGG | - | chr3_1:39053288-39053307 | Msa0357320:intron | 45.0% | |
! | AAGAAATCGTGCGCCTTGTT+GGG | - | chr3_1:39053311-39053330 | Msa0357320:intron | 45.0% |
! | CAAGAGCTTGTTTCCCAACA+AGG | + | chr3_1:39053327-39053346 | None:intergenic | 45.0% |
! | AAGGCCCTTGCACTCTAAAA+TGG | + | chr3_1:39053356-39053375 | None:intergenic | 45.0% |
GTGCAAGGGCCTTCAATTTA+AGG | - | chr3_1:39053363-39053382 | Msa0357320:intron | 45.0% | |
! | CTTCTCCTTTGAAAAGGCGA+TGG | - | chr3_1:39053501-39053520 | Msa0357320:intron | 45.0% |
! | TCTCCTTTGAAAAGGCGATG+GGG | - | chr3_1:39053503-39053522 | Msa0357320:intron | 45.0% |
GAAGAGGTTGTGGATTTGTG+AGG | - | chr3_1:39053664-39053683 | Msa0357320:intron | 45.0% | |
!! | ACAAAAAAATTAAAAAATTT+AGG | + | chr3_1:39050669-39050688 | None:intergenic | 5.0% |
ACACCAAGCACCTTATGGCA+AGG | - | chr3_1:39047781-39047800 | Msa0357320:CDS | 50.0% | |
! | CAACCTTGCCATAAGGTGCT+TGG | + | chr3_1:39047787-39047806 | None:intergenic | 50.0% |
AGTCCTGCAACCTTGCCATA+AGG | + | chr3_1:39047794-39047813 | None:intergenic | 50.0% | |
TGGACAGGAGATGAGAACGA+TGG | - | chr3_1:39048040-39048059 | Msa0357320:CDS | 50.0% | |
TGAGAACGATGGTGAGAACG+TGG | - | chr3_1:39048051-39048070 | Msa0357320:CDS | 50.0% | |
! | TCAGATGAGTTGGGTCTCAG+GGG | + | chr3_1:39048383-39048402 | None:intergenic | 50.0% |
! | CTCAGATGAGTTGGGTCTCA+GGG | + | chr3_1:39048384-39048403 | None:intergenic | 50.0% |
! | TCTCAGATGAGTTGGGTCTC+AGG | + | chr3_1:39048385-39048404 | None:intergenic | 50.0% |
! | AAGCTTATTTGGGGTCCTCC+TGG | - | chr3_1:39048849-39048868 | Msa0357320:CDS | 50.0% |
! | AGCTTATTTGGGGTCCTCCT+GGG | - | chr3_1:39048850-39048869 | Msa0357320:CDS | 50.0% |
ACAACCGTGTTCAACAGCTC+AGG | - | chr3_1:39049117-39049136 | Msa0357320:intron | 50.0% | |
CAACCGTGTTCAACAGCTCA+GGG | - | chr3_1:39049118-39049137 | Msa0357320:intron | 50.0% | |
TGGAAAGGCTTGCAAATGGG+TGG | - | chr3_1:39051212-39051231 | Msa0357320:CDS | 50.0% | |
TTGCAAATGGGTGGAGACCT+AGG | - | chr3_1:39051221-39051240 | Msa0357320:CDS | 50.0% | |
TGCAAATGGGTGGAGACCTA+GGG | - | chr3_1:39051222-39051241 | Msa0357320:CDS | 50.0% | |
ATTTCGACACTACGTCCCCT+AGG | + | chr3_1:39051241-39051260 | None:intergenic | 50.0% | |
AGGCCTCCACAACCAAATCA+TGG | + | chr3_1:39051626-39051645 | None:intergenic | 50.0% | |
GAATTTCCATTGAGCTGGCC+AGG | - | chr3_1:39051705-39051724 | Msa0357320:CDS | 50.0% | |
TTTCGGTCCTCAACCTACGA+TGG | + | chr3_1:39052754-39052773 | None:intergenic | 50.0% | |
GGCAGAAATGGTTACAACGG+TGG | - | chr3_1:39053229-39053248 | Msa0357320:intron | 50.0% | |
GGTTACAACGGTGGGAACAT+TGG | - | chr3_1:39053238-39053257 | Msa0357320:intron | 50.0% | |
TACAACGGTGGGAACATTGG+AGG | - | chr3_1:39053241-39053260 | Msa0357320:intron | 50.0% | |
ACAACGGTGGGAACATTGGA+GGG | - | chr3_1:39053242-39053261 | Msa0357320:intron | 50.0% | |
GTGGGAACATTGGAGGGTTT+AGG | - | chr3_1:39053248-39053267 | Msa0357320:intron | 50.0% | |
AAGGCGCACGATTTCTTCCT+TGG | + | chr3_1:39053308-39053327 | None:intergenic | 50.0% | |
GAAGAAATCGTGCGCCTTGT+TGG | - | chr3_1:39053310-39053329 | Msa0357320:intron | 50.0% | |
! | CTCCTTTGAAAAGGCGATGG+GGG | - | chr3_1:39053504-39053523 | Msa0357320:intron | 50.0% |
! | ATCCCCCATCGCCTTTTCAA+AGG | + | chr3_1:39053509-39053528 | None:intergenic | 50.0% |
CTAGAGCAAGGAAGAGGTTG+TGG | - | chr3_1:39053654-39053673 | Msa0357320:intron | 50.0% | |
GAGGTTGTGGATTTGTGAGG+AGG | - | chr3_1:39053667-39053686 | Msa0357320:intron | 50.0% | |
GCACCTTATGGCAAGGTTGC+AGG | - | chr3_1:39047788-39047807 | Msa0357320:CDS | 55.0% | |
TAGGGACCATACATTGGCCC+TGG | + | chr3_1:39050153-39050172 | None:intergenic | 55.0% | |
GCAAATGGGTGGAGACCTAG+GGG | - | chr3_1:39051223-39051242 | Msa0357320:CDS | 55.0% | |
CGGCCAGTACGTGTGTAATC+TGG | + | chr3_1:39051876-39051895 | None:intergenic | 55.0% | |
GTACTAGGTCGGTCAGGTAC+AGG | - | chr3_1:39051975-39051994 | Msa0357320:intron | 55.0% | |
GAGTGGTAAGCTGAGTCGTG+AGG | - | chr3_1:39052586-39052605 | Msa0357320:CDS | 55.0% | |
! | ATTTGGGGTCCTCCTGGGAC+TGG | - | chr3_1:39048855-39048874 | Msa0357320:CDS | 60.0% |
!! | GGACTGGAGGTGCTACGTTC+AGG | - | chr3_1:39051342-39051361 | Msa0357320:CDS | 60.0% |
GCGCTTCCTGGCCAGCTCAA+TGG | + | chr3_1:39051714-39051733 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 39046862 | 39053799 | 39046862 | ID=Msa0357320;Name=Msa0357320 |
chr3_1 | mRNA | 39046862 | 39053799 | 39046862 | ID=Msa0357320-mRNA-1;Parent=Msa0357320;Name=Msa0357320-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.55|0|1|1|1|10|0|1646 |
chr3_1 | exon | 39053683 | 39053799 | 39053683 | ID=Msa0357320-mRNA-1:exon:7018;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39052406 | 39052990 | 39052406 | ID=Msa0357320-mRNA-1:exon:7017;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39050793 | 39051962 | 39050793 | ID=Msa0357320-mRNA-1:exon:7016;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39050376 | 39050700 | 39050376 | ID=Msa0357320-mRNA-1:exon:7015;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39050019 | 39050277 | 39050019 | ID=Msa0357320-mRNA-1:exon:7014;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39049729 | 39049918 | 39049729 | ID=Msa0357320-mRNA-1:exon:7013;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39049173 | 39049531 | 39049173 | ID=Msa0357320-mRNA-1:exon:7012;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39048466 | 39048963 | 39048466 | ID=Msa0357320-mRNA-1:exon:7011;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39047277 | 39048387 | 39047277 | ID=Msa0357320-mRNA-1:exon:7010;Parent=Msa0357320-mRNA-1 |
chr3_1 | exon | 39046862 | 39047188 | 39046862 | ID=Msa0357320-mRNA-1:exon:7009;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39053683 | 39053799 | 39053683 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39052406 | 39052990 | 39052406 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39050793 | 39051962 | 39050793 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39050376 | 39050700 | 39050376 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39050019 | 39050277 | 39050019 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39049729 | 39049918 | 39049729 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39049173 | 39049531 | 39049173 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39048466 | 39048963 | 39048466 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39047277 | 39048387 | 39047277 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
chr3_1 | CDS | 39046862 | 39047188 | 39046862 | ID=Msa0357320-mRNA-1:cds;Parent=Msa0357320-mRNA-1 |
Gene Sequence |
Protein sequence |