Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366340 | XP_003590857.2 | 97.512 | 201 | 0 | 2 | 1 | 200 | 1 | 197 | 4.19e-138 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366340 | sp|O82268|LSH3_ARATH | 81.595 | 163 | 20 | 1 | 35 | 187 | 23 | 185 | 4.37e-83 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366340 | G7I5I7 | 97.512 | 201 | 0 | 2 | 1 | 200 | 1 | 197 | 2.00e-138 | 394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1366340 | 0.828343 | 9.475849e-55 | -8.615850e-47 |
| Msa0000190 | Msa1366340 | 0.821699 | 3.513453e-53 | -8.615850e-47 |
| Msa0001940 | Msa1366340 | 0.822745 | 2.010195e-53 | -8.615850e-47 |
| Msa0003700 | Msa1366340 | 0.815658 | 8.257083e-52 | -8.615850e-47 |
| Msa0017510 | Msa1366340 | 0.840443 | 8.669795e-58 | -8.615850e-47 |
| Msa0017950 | Msa1366340 | 0.821538 | 3.828156e-53 | -8.615850e-47 |
| Msa0021960 | Msa1366340 | 0.826728 | 2.312741e-54 | -8.615850e-47 |
| Msa0024550 | Msa1366340 | 0.912475 | 1.866877e-83 | -8.615850e-47 |
| Msa0027820 | Msa1366340 | 0.807171 | 5.758747e-50 | -8.615850e-47 |
| Msa0063890 | Msa1366340 | 0.818106 | 2.330774e-52 | -8.615850e-47 |
| Msa0081520 | Msa1366340 | 0.808120 | 3.620996e-50 | -8.615850e-47 |
| Msa0084380 | Msa1366340 | 0.804405 | 2.195058e-49 | -8.615850e-47 |
| Msa0089630 | Msa1366340 | 0.809479 | 1.853806e-50 | -8.615850e-47 |
| Msa0097770 | Msa1366340 | 0.833555 | 4.986147e-56 | -8.615850e-47 |
| Msa0098040 | Msa1366340 | 0.816313 | 5.897801e-52 | -8.615850e-47 |
| Msa0101440 | Msa1366340 | 0.819297 | 1.250554e-52 | -8.615850e-47 |
| Msa0112570 | Msa1366340 | 0.817130 | 3.868653e-52 | -8.615850e-47 |
| Msa0117140 | Msa1366340 | 0.822270 | 2.591513e-53 | -8.615850e-47 |
| Msa0120400 | Msa1366340 | 0.912446 | 1.930769e-83 | -8.615850e-47 |
| Msa1357790 | Msa1366340 | 0.815894 | 7.316055e-52 | -8.615850e-47 |
| Msa1366340 | Msa1373100 | 0.813321 | 2.715410e-51 | -8.615850e-47 |
| Msa1366340 | Msa1374550 | 0.825584 | 4.328399e-54 | -8.615850e-47 |
| Msa1366340 | Msa1385890 | 0.833489 | 5.177696e-56 | -8.615850e-47 |
| Msa1366340 | Msa1387870 | 0.802984 | 4.327406e-49 | -8.615850e-47 |
| Msa1366340 | Msa1390690 | 0.806027 | 1.003851e-49 | -8.615850e-47 |
| Msa1366340 | Msa1390700 | 0.816166 | 6.360744e-52 | -8.615850e-47 |
| Msa1366340 | Msa1392900 | 0.810949 | 8.936448e-51 | -8.615850e-47 |
| Msa1366340 | Msa1392910 | 0.821292 | 4.363228e-53 | -8.615850e-47 |
| Msa1366340 | Msa1393880 | 0.807678 | 4.496166e-50 | -8.615850e-47 |
| Msa1366340 | Msa1400870 | -0.806155 | 9.437193e-50 | -8.615850e-47 |
| Msa1366340 | Msa1419370 | 0.811821 | 5.778354e-51 | -8.615850e-47 |
| Msa1366340 | Msa1422950 | 0.813092 | 3.048826e-51 | -8.615850e-47 |
| Msa1366340 | Msa1423350 | 0.801524 | 8.647415e-49 | -8.615850e-47 |
| Msa1366340 | Msa1425880 | 0.806943 | 6.435520e-50 | -8.615850e-47 |
| Msa1366340 | Msa1438250 | 0.808181 | 3.513535e-50 | -8.615850e-47 |
| Msa1366340 | Msa1444510 | 0.817142 | 3.843380e-52 | -8.615850e-47 |
| Msa1366340 | Msa1445390 | -0.821481 | 3.945537e-53 | -8.615850e-47 |
| Msa1366340 | Msa1449340 | -0.822995 | 1.757411e-53 | -8.615850e-47 |
| Msa1366340 | Msa1450100 | 0.825676 | 4.117645e-54 | -8.615850e-47 |
| Msa1366340 | Msa1451160 | 0.810242 | 1.270360e-50 | -8.615850e-47 |
| Msa1366340 | Msa1464810 | 0.804495 | 2.101493e-49 | -8.615850e-47 |
| Msa1366340 | Msa1466540 | 0.835575 | 1.549340e-56 | -8.615850e-47 |
| Msa0623330 | Msa1366340 | 0.813127 | 2.995080e-51 | -8.615850e-47 |
| Msa0625720 | Msa1366340 | 0.809267 | 2.058562e-50 | -8.615850e-47 |
| Msa0626450 | Msa1366340 | 0.808779 | 2.618964e-50 | -8.615850e-47 |
| Msa0626490 | Msa1366340 | 0.805507 | 1.290992e-49 | -8.615850e-47 |
| Msa0626510 | Msa1366340 | 0.831913 | 1.274599e-55 | -8.615850e-47 |
| Msa0627450 | Msa1366340 | 0.815433 | 9.269072e-52 | -8.615850e-47 |
| Msa0662240 | Msa1366340 | 0.803686 | 3.096995e-49 | -8.615850e-47 |
| Msa0663390 | Msa1366340 | 0.817281 | 3.576406e-52 | -8.615850e-47 |
| Msa0664600 | Msa1366340 | 0.806610 | 7.568251e-50 | -8.615850e-47 |
| Msa0664910 | Msa1366340 | 0.820805 | 5.648952e-53 | -8.615850e-47 |
| Msa0677410 | Msa1366340 | 0.801623 | 8.251128e-49 | -8.615850e-47 |
| Msa0682050 | Msa1366340 | 0.814518 | 1.479343e-51 | -8.615850e-47 |
| Msa0683510 | Msa1366340 | 0.804182 | 2.442612e-49 | -8.615850e-47 |
| Msa0697160 | Msa1366340 | 0.825143 | 5.505823e-54 | -8.615850e-47 |
| Msa0703780 | Msa1366340 | 0.807588 | 4.697605e-50 | -8.615850e-47 |
| Msa0710800 | Msa1366340 | 0.843339 | 1.489441e-58 | -8.615850e-47 |
| Msa0712270 | Msa1366340 | 0.800681 | 1.285686e-48 | -8.615850e-47 |
| Msa0722850 | Msa1366340 | 0.802257 | 6.112920e-49 | -8.615850e-47 |
| Msa0727710 | Msa1366340 | 0.806877 | 6.643361e-50 | -8.615850e-47 |
| Msa0727930 | Msa1366340 | 0.819256 | 1.277789e-52 | -8.615850e-47 |
| Msa0731940 | Msa1366340 | 0.817710 | 2.864163e-52 | -8.615850e-47 |
| Msa0733390 | Msa1366340 | 0.838729 | 2.418933e-57 | -8.615850e-47 |
| Msa0739730 | Msa1366340 | 0.818802 | 1.620784e-52 | -8.615850e-47 |
| Msa0743890 | Msa1366340 | 0.804315 | 2.291205e-49 | -8.615850e-47 |
| Msa0762970 | Msa1366340 | 0.804855 | 1.768222e-49 | -8.615850e-47 |
| Msa0767300 | Msa1366340 | 0.818501 | 1.896689e-52 | -8.615850e-47 |
| Msa0769180 | Msa1366340 | 0.833831 | 4.253900e-56 | -8.615850e-47 |
| Msa0795870 | Msa1366340 | 0.801460 | 8.911389e-49 | -8.615850e-47 |
| Msa0805330 | Msa1366340 | 0.824199 | 9.186281e-54 | -8.615850e-47 |
| Msa0810220 | Msa1366340 | 0.810532 | 1.099809e-50 | -8.615850e-47 |
| Msa0816150 | Msa1366340 | 0.819614 | 1.058746e-52 | -8.615850e-47 |
| Msa0822870 | Msa1366340 | 0.817872 | 2.631689e-52 | -8.615850e-47 |
| Msa0824840 | Msa1366340 | 0.806366 | 8.518451e-50 | -8.615850e-47 |
| Msa0826130 | Msa1366340 | 0.809401 | 1.927228e-50 | -8.615850e-47 |
| Msa0828560 | Msa1366340 | 0.817191 | 3.748599e-52 | -8.615850e-47 |
| Msa0829300 | Msa1366340 | 0.820158 | 7.952187e-53 | -8.615850e-47 |
| Msa0829330 | Msa1366340 | 0.831282 | 1.823794e-55 | -8.615850e-47 |
| Msa0832340 | Msa1366340 | 0.819957 | 8.840478e-53 | -8.615850e-47 |
| Msa0833650 | Msa1366340 | 0.804539 | 2.057843e-49 | -8.615850e-47 |
| Msa0124060 | Msa1366340 | 0.807997 | 3.845787e-50 | -8.615850e-47 |
| Msa0131900 | Msa1366340 | 0.834221 | 3.398192e-56 | -8.615850e-47 |
| Msa0139060 | Msa1366340 | 0.802333 | 5.895490e-49 | -8.615850e-47 |
| Msa0140500 | Msa1366340 | -0.820845 | 5.531841e-53 | -8.615850e-47 |
| Msa0157290 | Msa1366340 | 0.841477 | 4.640893e-58 | -8.615850e-47 |
| Msa0164330 | Msa1366340 | 0.885663 | 6.695822e-72 | -8.615850e-47 |
| Msa0166560 | Msa1366340 | 0.804501 | 2.096097e-49 | -8.615850e-47 |
| Msa0168500 | Msa1366340 | 0.814394 | 1.575162e-51 | -8.615850e-47 |
| Msa0169860 | Msa1366340 | 0.818182 | 2.240410e-52 | -8.615850e-47 |
| Msa0175730 | Msa1366340 | 0.815803 | 7.667174e-52 | -8.615850e-47 |
| Msa0186010 | Msa1366340 | 0.818955 | 1.496249e-52 | -8.615850e-47 |
| Msa0188150 | Msa1366340 | 0.817787 | 2.751795e-52 | -8.615850e-47 |
| Msa0197100 | Msa1366340 | 0.835388 | 1.727579e-56 | -8.615850e-47 |
| Msa0211150 | Msa1366340 | 0.834239 | 3.362564e-56 | -8.615850e-47 |
| Msa0212990 | Msa1366340 | 0.810785 | 9.697646e-51 | -8.615850e-47 |
| Msa0218810 | Msa1366340 | 0.811010 | 8.671403e-51 | -8.615850e-47 |
| Msa0221000 | Msa1366340 | 0.815780 | 7.755804e-52 | -8.615850e-47 |
| Msa0221290 | Msa1366340 | 0.813487 | 2.496870e-51 | -8.615850e-47 |
| Msa0221470 | Msa1366340 | 0.814358 | 1.604850e-51 | -8.615850e-47 |
| Msa0224780 | Msa1366340 | 0.813244 | 2.823565e-51 | -8.615850e-47 |
| Msa0225100 | Msa1366340 | 0.854193 | 1.448336e-61 | -8.615850e-47 |
| Msa0225860 | Msa1366340 | 0.820702 | 5.964850e-53 | -8.615850e-47 |
| Msa0230750 | Msa1366340 | 0.813447 | 2.548152e-51 | -8.615850e-47 |
| Msa1225860 | Msa1366340 | -0.815881 | 7.365448e-52 | -8.615850e-47 |
| Msa1228200 | Msa1366340 | 0.832051 | 1.178549e-55 | -8.615850e-47 |
| Msa1236410 | Msa1366340 | 0.839453 | 1.570645e-57 | -8.615850e-47 |
| Msa1238820 | Msa1366340 | 0.839188 | 1.840092e-57 | -8.615850e-47 |
| Msa1267770 | Msa1366340 | 0.815849 | 7.488966e-52 | -8.615850e-47 |
| Msa1276660 | Msa1366340 | 0.801662 | 8.100055e-49 | -8.615850e-47 |
| Msa1277220 | Msa1366340 | 0.803163 | 3.974111e-49 | -8.615850e-47 |
| Msa1287440 | Msa1366340 | 0.816673 | 4.898902e-52 | -8.615850e-47 |
| Msa1291730 | Msa1366340 | 0.813747 | 2.188468e-51 | -8.615850e-47 |
| Msa1297230 | Msa1366340 | 0.837890 | 3.978495e-57 | -8.615850e-47 |
| Msa1298370 | Msa1366340 | 0.818699 | 1.710762e-52 | -8.615850e-47 |
| Msa1298810 | Msa1366340 | 0.809261 | 2.065058e-50 | -8.615850e-47 |
| Msa1309030 | Msa1366340 | 0.806438 | 8.226672e-50 | -8.615850e-47 |
| Msa1314650 | Msa1366340 | 0.818819 | 1.606116e-52 | -8.615850e-47 |
| Msa1315590 | Msa1366340 | 0.834891 | 2.305186e-56 | -8.615850e-47 |
| Msa1324500 | Msa1366340 | 0.802555 | 5.306012e-49 | -8.615850e-47 |
| Msa1328710 | Msa1366340 | 0.801557 | 8.512738e-49 | -8.615850e-47 |
| Msa1330420 | Msa1366340 | 0.823703 | 1.200996e-53 | -8.615850e-47 |
| Msa1343430 | Msa1366340 | 0.824709 | 6.968949e-54 | -8.615850e-47 |
| Msa0364340 | Msa1366340 | 0.806847 | 6.741630e-50 | -8.615850e-47 |
| Msa0365100 | Msa1366340 | 0.834735 | 2.523978e-56 | -8.615850e-47 |
| Msa0367870 | Msa1366340 | 0.839642 | 1.402327e-57 | -8.615850e-47 |
| Msa0378720 | Msa1366340 | 0.847714 | 9.707308e-60 | -8.615850e-47 |
| Msa0381610 | Msa1366340 | -0.833148 | 6.299899e-56 | -8.615850e-47 |
| Msa0385390 | Msa1366340 | 0.816555 | 5.207158e-52 | -8.615850e-47 |
| Msa0392510 | Msa1366340 | 0.801280 | 9.701416e-49 | -8.615850e-47 |
| Msa0393080 | Msa1366340 | 0.806620 | 7.529230e-50 | -8.615850e-47 |
| Msa0395790 | Msa1366340 | 0.805986 | 1.024300e-49 | -8.615850e-47 |
| Msa0405130 | Msa1366340 | 0.804291 | 2.317950e-49 | -8.615850e-47 |
| Msa0406770 | Msa1366340 | 0.800456 | 1.429116e-48 | -8.615850e-47 |
| Msa0410650 | Msa1366340 | 0.805190 | 1.504388e-49 | -8.615850e-47 |
| Msa0415320 | Msa1366340 | 0.836229 | 1.057398e-56 | -8.615850e-47 |
| Msa0418190 | Msa1366340 | 0.801235 | 9.906690e-49 | -8.615850e-47 |
| Msa0427100 | Msa1366340 | 0.826348 | 2.849619e-54 | -8.615850e-47 |
| Msa0427120 | Msa1366340 | 0.829211 | 5.843386e-55 | -8.615850e-47 |
| Msa0428370 | Msa1366340 | 0.802427 | 5.638853e-49 | -8.615850e-47 |
| Msa0440750 | Msa1366340 | 0.802433 | 5.622098e-49 | -8.615850e-47 |
| Msa0460590 | Msa1366340 | 0.830245 | 3.274306e-55 | -8.615850e-47 |
| Msa0464260 | Msa1366340 | 0.806297 | 8.807558e-50 | -8.615850e-47 |
| Msa0464680 | Msa1366340 | 0.847818 | 9.087768e-60 | -8.615850e-47 |
| Msa0467430 | Msa1366340 | 0.809144 | 2.188248e-50 | -8.615850e-47 |
| Msa0471670 | Msa1366340 | 0.808655 | 2.783820e-50 | -8.615850e-47 |
| Msa0473500 | Msa1366340 | 0.813296 | 2.750796e-51 | -8.615850e-47 |
| Msa0474730 | Msa1366340 | 0.830419 | 2.968677e-55 | -8.615850e-47 |
| Msa0479170 | Msa1366340 | 0.815278 | 1.003435e-51 | -8.615850e-47 |
| Msa0481530 | Msa1366340 | 0.809184 | 2.145331e-50 | -8.615850e-47 |
| Msa0980200 | Msa1366340 | 0.813136 | 2.981709e-51 | -8.615850e-47 |
| Msa1002850 | Msa1366340 | 0.803449 | 3.467302e-49 | -8.615850e-47 |
| Msa1005870 | Msa1366340 | 0.840628 | 7.752377e-58 | -8.615850e-47 |
| Msa1009660 | Msa1366340 | 0.802682 | 4.997022e-49 | -8.615850e-47 |
| Msa1019000 | Msa1366340 | 0.807644 | 4.569815e-50 | -8.615850e-47 |
| Msa1019430 | Msa1366340 | 0.861623 | 9.006408e-64 | -8.615850e-47 |
| Msa1019470 | Msa1366340 | 0.835948 | 1.246058e-56 | -8.615850e-47 |
| Msa1020510 | Msa1366340 | 0.826365 | 2.824148e-54 | -8.615850e-47 |
| Msa1020670 | Msa1366340 | 0.808875 | 2.497750e-50 | -8.615850e-47 |
| Msa1023500 | Msa1366340 | 0.805960 | 1.037115e-49 | -8.615850e-47 |
| Msa1031930 | Msa1366340 | 0.807561 | 4.760709e-50 | -8.615850e-47 |
| Msa1036610 | Msa1366340 | 0.814529 | 1.471112e-51 | -8.615850e-47 |
| Msa1039020 | Msa1366340 | 0.831588 | 1.533279e-55 | -8.615850e-47 |
| Msa1043370 | Msa1366340 | 0.848654 | 5.340483e-60 | -8.615850e-47 |
| Msa1047980 | Msa1366340 | 0.824413 | 8.183017e-54 | -8.615850e-47 |
| Msa1075540 | Msa1366340 | 0.828394 | 9.214183e-55 | -8.615850e-47 |
| Msa1078170 | Msa1366340 | 0.803064 | 4.166828e-49 | -8.615850e-47 |
| Msa1085200 | Msa1366340 | 0.804776 | 1.836400e-49 | -8.615850e-47 |
| Msa1087650 | Msa1366340 | 0.819255 | 1.278715e-52 | -8.615850e-47 |
| Msa1092010 | Msa1366340 | 0.841281 | 5.227537e-58 | -8.615850e-47 |
| Msa0239030 | Msa1366340 | 0.853260 | 2.686851e-61 | -8.615850e-47 |
| Msa0244640 | Msa1366340 | 0.829693 | 4.463546e-55 | -8.615850e-47 |
| Msa0244960 | Msa1366340 | 0.802271 | 6.072146e-49 | -8.615850e-47 |
| Msa0258310 | Msa1366340 | 0.821292 | 4.363024e-53 | -8.615850e-47 |
| Msa0259500 | Msa1366340 | 0.803321 | 3.685603e-49 | -8.615850e-47 |
| Msa0261340 | Msa1366340 | 0.837841 | 4.096725e-57 | -8.615850e-47 |
| Msa0265850 | Msa1366340 | 0.820193 | 7.806416e-53 | -8.615850e-47 |
| Msa0266180 | Msa1366340 | 0.843186 | 1.635351e-58 | -8.615850e-47 |
| Msa0266350 | Msa1366340 | 0.800916 | 1.151368e-48 | -8.615850e-47 |
| Msa0276740 | Msa1366340 | 0.857581 | 1.480989e-62 | -8.615850e-47 |
| Msa0283330 | Msa1366340 | 0.822487 | 2.308064e-53 | -8.615850e-47 |
| Msa0287740 | Msa1366340 | 0.858874 | 6.105988e-63 | -8.615850e-47 |
| Msa0292400 | Msa1366340 | 0.815688 | 8.132143e-52 | -8.615850e-47 |
| Msa0297790 | Msa1366340 | 0.851605 | 7.961691e-61 | -8.615850e-47 |
| Msa0300270 | Msa1366340 | 0.837272 | 5.731565e-57 | -8.615850e-47 |
| Msa0300320 | Msa1366340 | 0.831216 | 1.893319e-55 | -8.615850e-47 |
| Msa0300690 | Msa1366340 | 0.815617 | 8.435893e-52 | -8.615850e-47 |
| Msa0305700 | Msa1366340 | 0.803490 | 3.400753e-49 | -8.615850e-47 |
| Msa0306370 | Msa1366340 | 0.811769 | 5.931994e-51 | -8.615850e-47 |
| Msa0316680 | Msa1366340 | 0.851718 | 7.395046e-61 | -8.615850e-47 |
| Msa0321620 | Msa1366340 | 0.805725 | 1.162082e-49 | -8.615850e-47 |
| Msa0330340 | Msa1366340 | 0.801847 | 7.422513e-49 | -8.615850e-47 |
| Msa0335800 | Msa1366340 | 0.826868 | 2.141550e-54 | -8.615850e-47 |
| Msa0336310 | Msa1366340 | 0.805619 | 1.222950e-49 | -8.615850e-47 |
| Msa0336320 | Msa1366340 | 0.813923 | 2.001513e-51 | -8.615850e-47 |
| Msa0337700 | Msa1366340 | 0.840540 | 8.177093e-58 | -8.615850e-47 |
| Msa0345330 | Msa1366340 | 0.827344 | 1.647927e-54 | -8.615850e-47 |
| Msa0345410 | Msa1366340 | 0.823748 | 1.172118e-53 | -8.615850e-47 |
| Msa0357320 | Msa1366340 | 0.816390 | 5.667095e-52 | -8.615850e-47 |
| Msa0357340 | Msa1366340 | 0.838300 | 3.121001e-57 | -8.615850e-47 |
| Msa0357350 | Msa1366340 | 0.801156 | 1.028598e-48 | -8.615850e-47 |
| Msa0360210 | Msa1366340 | 0.803181 | 3.939937e-49 | -8.615850e-47 |
| Msa0363200 | Msa1366340 | 0.808718 | 2.698193e-50 | -8.615850e-47 |
| Msa1121490 | Msa1366340 | 0.829438 | 5.146697e-55 | -8.615850e-47 |
| Msa1123380 | Msa1366340 | 0.837560 | 4.836744e-57 | -8.615850e-47 |
| Msa1132840 | Msa1366340 | 0.809329 | 1.996358e-50 | -8.615850e-47 |
| Msa1135390 | Msa1366340 | 0.803230 | 3.849202e-49 | -8.615850e-47 |
| Msa1137570 | Msa1366340 | 0.817327 | 3.492690e-52 | -8.615850e-47 |
| Msa1140210 | Msa1366340 | 0.814066 | 1.861519e-51 | -8.615850e-47 |
| Msa1142020 | Msa1366340 | 0.800781 | 1.226693e-48 | -8.615850e-47 |
| Msa1144450 | Msa1366340 | 0.815926 | 7.197556e-52 | -8.615850e-47 |
| Msa1155170 | Msa1366340 | -0.819253 | 1.280099e-52 | -8.615850e-47 |
| Msa1163650 | Msa1366340 | -0.801356 | 9.359636e-49 | -8.615850e-47 |
| Msa1164960 | Msa1366340 | 0.823387 | 1.423621e-53 | -8.615850e-47 |
| Msa1167340 | Msa1366340 | 0.802039 | 6.779334e-49 | -8.615850e-47 |
| Msa1186020 | Msa1366340 | 0.807075 | 6.033737e-50 | -8.615850e-47 |
| Msa1193290 | Msa1366340 | 0.810179 | 1.310850e-50 | -8.615850e-47 |
| Msa1199830 | Msa1366340 | -0.803987 | 2.681803e-49 | -8.615850e-47 |
| Msa1205280 | Msa1366340 | 0.817092 | 3.944584e-52 | -8.615850e-47 |
| Msa1208160 | Msa1366340 | 0.808120 | 3.619489e-50 | -8.615850e-47 |
| Msa1208430 | Msa1366340 | 0.801941 | 7.100926e-49 | -8.615850e-47 |
| Msa0523000 | Msa1366340 | 0.809006 | 2.341758e-50 | -8.615850e-47 |
| Msa0529890 | Msa1366340 | 0.809112 | 2.222363e-50 | -8.615850e-47 |
| Msa0535040 | Msa1366340 | 0.803775 | 2.968217e-49 | -8.615850e-47 |
| Msa0547170 | Msa1366340 | 0.812928 | 3.311904e-51 | -8.615850e-47 |
| Msa0556430 | Msa1366340 | 0.806917 | 6.515342e-50 | -8.615850e-47 |
| Msa0572840 | Msa1366340 | 0.817108 | 3.911597e-52 | -8.615850e-47 |
| Msa0580370 | Msa1366340 | 0.805443 | 1.331622e-49 | -8.615850e-47 |
| Msa0581470 | Msa1366340 | 0.816436 | 5.534278e-52 | -8.615850e-47 |
| Msa0583360 | Msa1366340 | -0.810954 | 8.915839e-51 | -8.615850e-47 |
| Msa0585560 | Msa1366340 | 0.817387 | 3.386579e-52 | -8.615850e-47 |
| Msa0591790 | Msa1366340 | 0.805871 | 1.082910e-49 | -8.615850e-47 |
| Msa0594660 | Msa1366340 | 0.811781 | 5.896955e-51 | -8.615850e-47 |
| Msa0597790 | Msa1366340 | 0.810384 | 1.184115e-50 | -8.615850e-47 |
| Msa0601750 | Msa1366340 | 0.801681 | 8.026999e-49 | -8.615850e-47 |
| Msa0602460 | Msa1366340 | 0.805228 | 1.477058e-49 | -8.615850e-47 |
| Msa0842680 | Msa1366340 | 0.802040 | 6.775923e-49 | -8.615850e-47 |
| Msa0843220 | Msa1366340 | 0.819083 | 1.398845e-52 | -8.615850e-47 |
| Msa0844490 | Msa1366340 | 0.827353 | 1.639908e-54 | -8.615850e-47 |
| Msa0861510 | Msa1366340 | 0.823590 | 1.276156e-53 | -8.615850e-47 |
| Msa0861530 | Msa1366340 | 0.807500 | 4.904927e-50 | -8.615850e-47 |
| Msa0861600 | Msa1366340 | 0.825823 | 3.799076e-54 | -8.615850e-47 |
| Msa0861870 | Msa1366340 | 0.801218 | 9.988683e-49 | -8.615850e-47 |
| Msa0866270 | Msa1366340 | 0.801118 | 1.047066e-48 | -8.615850e-47 |
| Msa0866520 | Msa1366340 | 0.818087 | 2.353796e-52 | -8.615850e-47 |
| Msa0875290 | Msa1366340 | 0.833657 | 4.701168e-56 | -8.615850e-47 |
| Msa0876550 | Msa1366340 | 0.803647 | 3.155064e-49 | -8.615850e-47 |
| Msa0880140 | Msa1366340 | 0.836528 | 8.878562e-57 | -8.615850e-47 |
| Msa0890320 | Msa1366340 | 0.805000 | 1.649057e-49 | -8.615850e-47 |
| Msa0896410 | Msa1366340 | 0.808674 | 2.757792e-50 | -8.615850e-47 |
| Msa0897330 | Msa1366340 | 0.802699 | 4.956887e-49 | -8.615850e-47 |
| Msa0909120 | Msa1366340 | 0.800745 | 1.247617e-48 | -8.615850e-47 |
| Msa0909140 | Msa1366340 | 0.808469 | 3.049747e-50 | -8.615850e-47 |
| Msa0911540 | Msa1366340 | 0.806778 | 6.974124e-50 | -8.615850e-47 |
| Msa0922410 | Msa1366340 | 0.809786 | 1.592707e-50 | -8.615850e-47 |
| Msa0926890 | Msa1366340 | 0.806771 | 6.997331e-50 | -8.615850e-47 |
| Msa0947660 | Msa1366340 | 0.801714 | 7.903016e-49 | -8.615850e-47 |
| Msa0961610 | Msa1366340 | 0.814609 | 1.412261e-51 | -8.615850e-47 |
| Msa0964840 | Msa1366340 | 0.834701 | 2.573692e-56 | -8.615850e-47 |
| Msa0965610 | Msa1366340 | 0.801832 | 7.474342e-49 | -8.615850e-47 |
| Msa0967380 | Msa1366340 | 0.903304 | 3.982452e-79 | -8.615850e-47 |
| Msa0967870 | Msa1366340 | 0.853266 | 2.676331e-61 | -8.615850e-47 |
| Msa0972100 | Msa1366340 | 0.804506 | 2.090647e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366340 | MtrunA17_Chr1g0187671 | 97.512 | 201 | 0 | 2 | 1 | 200 | 1 | 197 | 3.85e-142 | 394 |
| Msa1366340 | MtrunA17_Chr1g0167411 | 72.487 | 189 | 43 | 2 | 1 | 180 | 1 | 189 | 3.71e-91 | 266 |
| Msa1366340 | MtrunA17_Chr4g0051251 | 81.119 | 143 | 22 | 1 | 44 | 186 | 39 | 176 | 2.57e-86 | 254 |
| Msa1366340 | MtrunA17_Chr5g0431211 | 78.571 | 140 | 30 | 0 | 50 | 189 | 31 | 170 | 3.19e-84 | 248 |
| Msa1366340 | MtrunA17_Chr7g0261381 | 93.333 | 135 | 9 | 0 | 52 | 186 | 60 | 194 | 8.26e-83 | 244 |
| Msa1366340 | MtrunA17_Chr1g0183761 | 94.656 | 131 | 7 | 0 | 56 | 186 | 45 | 175 | 1.43e-81 | 241 |
| Msa1366340 | MtrunA17_Chr2g0283861 | 71.622 | 148 | 42 | 0 | 43 | 190 | 22 | 169 | 1.38e-74 | 223 |
| Msa1366340 | MtrunA17_Chr3g0105921 | 80.597 | 134 | 26 | 0 | 56 | 189 | 42 | 175 | 2.50e-74 | 223 |
| Msa1366340 | MtrunA17_Chr2g0325831 | 68.212 | 151 | 42 | 1 | 29 | 179 | 2 | 146 | 9.71e-74 | 219 |
| Msa1366340 | MtrunA17_Chr4g0041141 | 68.707 | 147 | 41 | 1 | 33 | 179 | 11 | 152 | 1.92e-73 | 219 |
| Msa1366340 | MtrunA17_Chr2g0315791 | 75.182 | 137 | 34 | 0 | 54 | 190 | 31 | 167 | 7.77e-73 | 218 |
| Msa1366340 | MtrunA17_Chr7g0274631 | 65.839 | 161 | 48 | 3 | 28 | 187 | 4 | 158 | 9.92e-72 | 215 |
| Msa1366340 | MtrunA17_Chr1g0190231 | 83.200 | 125 | 21 | 0 | 56 | 180 | 40 | 164 | 8.70e-69 | 207 |
| Msa1366340 | MtrunA17_Chr8g0379061 | 73.016 | 126 | 34 | 0 | 54 | 179 | 83 | 208 | 2.38e-56 | 178 |
| Msa1366340 | MtrunA17_Chr1g0211641 | 80.435 | 46 | 9 | 0 | 49 | 94 | 64 | 109 | 3.67e-22 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366340 | AT2G31160.1 | 81.595 | 163 | 20 | 1 | 35 | 187 | 23 | 185 | 4.44e-84 | 248 |
| Msa1366340 | AT1G07090.1 | 78.723 | 141 | 27 | 1 | 47 | 187 | 25 | 162 | 1.61e-83 | 246 |
| Msa1366340 | AT3G23290.2 | 78.235 | 170 | 29 | 1 | 19 | 180 | 3 | 172 | 7.58e-82 | 241 |
| Msa1366340 | AT5G58500.1 | 76.596 | 141 | 32 | 1 | 55 | 194 | 18 | 158 | 4.66e-80 | 236 |
| Msa1366340 | AT5G28490.1 | 81.379 | 145 | 23 | 1 | 41 | 185 | 14 | 154 | 1.03e-73 | 221 |
| Msa1366340 | AT3G04510.1 | 82.308 | 130 | 23 | 0 | 56 | 185 | 33 | 162 | 1.09e-70 | 214 |
| Msa1366340 | AT2G42610.1 | 71.233 | 146 | 39 | 1 | 42 | 187 | 14 | 156 | 1.91e-70 | 212 |
| Msa1366340 | AT2G42610.2 | 71.233 | 146 | 39 | 1 | 42 | 187 | 14 | 156 | 1.91e-70 | 212 |
| Msa1366340 | AT1G78815.1 | 70.079 | 127 | 38 | 0 | 53 | 179 | 37 | 163 | 5.65e-66 | 201 |
| Msa1366340 | AT4G18610.1 | 69.841 | 126 | 37 | 1 | 55 | 179 | 36 | 161 | 4.36e-63 | 194 |
| Msa1366340 | AT1G16910.1 | 65.909 | 132 | 45 | 0 | 53 | 184 | 20 | 151 | 2.12e-62 | 191 |
Find 33 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAAGGTGCAGGTGGATT+TGG | 0.285867 | tig0018446:+216428 | None:intergenic |
| CTTAGAGTGTTTGTCGTTGC+TGG | 0.294103 | tig0018446:+216629 | None:intergenic |
| AGAAGAGACTGGAACACTTT+TGG | 0.322091 | tig0018446:-216587 | Msa1366340:CDS |
| GACTCTTTCTTCGTGAAGTT+AGG | 0.348358 | tig0018446:-216289 | Msa1366340:CDS |
| TTAAGGTATCTTGATCAGTT+TGG | 0.366705 | tig0018446:-216494 | Msa1366340:CDS |
| TTGTCCTCTCAGACAAGCTT+GGG | 0.367576 | tig0018446:-216405 | Msa1366340:CDS |
| GTGGTGGTCTATGGTTTCTT+AGG | 0.368488 | tig0018446:+216558 | None:intergenic |
| AAACCTGAAGATAACCCTTT+TGG | 0.390636 | tig0018446:-216326 | Msa1366340:CDS |
| GGTGGTGGAGGTTGAATTTG+AGG | 0.396468 | tig0018446:+216212 | None:intergenic |
| ACTTAATTAGTTGCATTTGA+TGG | 0.399489 | tig0018446:+216188 | None:intergenic |
| GCACCAAAAGGGTTATCTTC+AGG | 0.403413 | tig0018446:+216323 | None:intergenic |
| ACTCTTTCTTCGTGAAGTTA+GGG | 0.427767 | tig0018446:-216288 | Msa1366340:CDS |
| GTCTTCTGAGGTTGTTGTGT+TGG | 0.429348 | tig0018446:+216700 | None:intergenic |
| CTTGTCCTCTCAGACAAGCT+TGG | 0.437451 | tig0018446:-216406 | Msa1366340:CDS |
| GCATTTGATGGTGGTGGTGG+AGG | 0.439596 | tig0018446:+216200 | None:intergenic |
| GTTGCATTTGATGGTGGTGG+TGG | 0.444483 | tig0018446:+216197 | None:intergenic |
| GGAAGTCTTGATGCATTGAT+TGG | 0.461550 | tig0018446:-216383 | Msa1366340:CDS |
| CTAACAGCACGAGCACCAAA+AGG | 0.492363 | tig0018446:+216311 | None:intergenic |
| AGAGTGAAAGTGGTGGTCTA+TGG | 0.493036 | tig0018446:+216549 | None:intergenic |
| TTAGTTGCATTTGATGGTGG+TGG | 0.493298 | tig0018446:+216194 | None:intergenic |
| CTTTCACTCTCACGTTGTAG+TGG | 0.531680 | tig0018446:-216536 | Msa1366340:CDS |
| AGAGGACAAGGACAAGGTGC+AGG | 0.565916 | tig0018446:+216419 | None:intergenic |
| CAAGCTTGTCTGAGAGGACA+AGG | 0.577230 | tig0018446:+216407 | None:intergenic |
| CTACAACGTGAGAGTGAAAG+TGG | 0.580478 | tig0018446:+216539 | None:intergenic |
| CTTCCCCAAGCTTGTCTGAG+AGG | 0.586547 | tig0018446:+216401 | None:intergenic |
| TAACAGCACGAGCACCAAAA+GGG | 0.587993 | tig0018446:+216312 | None:intergenic |
| GGACAAGGACAAGGTGCAGG+TGG | 0.600667 | tig0018446:+216422 | None:intergenic |
| GACTCTCAATCTAAAGCTAG+AGG | 0.600860 | tig0018446:-216266 | Msa1366340:CDS |
| TAATTAGTTGCATTTGATGG+TGG | 0.602526 | tig0018446:+216191 | None:intergenic |
| AGAGTGTTTGTCGTTGCTGG+TGG | 0.637477 | tig0018446:+216632 | None:intergenic |
| TGTCCTCTCAGACAAGCTTG+GGG | 0.658773 | tig0018446:-216404 | Msa1366340:CDS |
| TGTCTGAGAGGACAAGGACA+AGG | 0.664143 | tig0018446:+216413 | None:intergenic |
| CAACGTGAGAGTGAAAGTGG+TGG | 0.746060 | tig0018446:+216542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CACATGTTCTTGAATTTTTA+AGG | - | tig0018446:216449-216468 | Msa1366340:CDS | 25.0% |
| AGAATCAAAAAAGAAGAGAC+TGG | - | tig0018446:216362-216381 | Msa1366340:CDS | 30.0% | |
| ! | TTAAGGTATCTTGATCAGTT+TGG | - | tig0018446:216466-216485 | Msa1366340:CDS | 30.0% |
| TGATCAGTTTGGAAAAACTA+AGG | - | tig0018446:216477-216496 | Msa1366340:CDS | 30.0% | |
| !!! | TCACAGATTTGTCCTTTTTT+TGG | - | tig0018446:216505-216524 | Msa1366340:CDS | 30.0% |
| TAATTAGTTGCATTTGATGG+TGG | + | tig0018446:216772-216791 | None:intergenic | 30.0% | |
| !! | GATGTTTTTGTTGTCTTCTG+AGG | + | tig0018446:216275-216294 | None:intergenic | 35.0% |
| GGATTTGGATGACCAAAAAA+AGG | + | tig0018446:216520-216539 | None:intergenic | 35.0% | |
| ! | AAACCTGAAGATAACCCTTT+TGG | - | tig0018446:216634-216653 | Msa1366340:CDS | 35.0% |
| ACTCTTTCTTCGTGAAGTTA+GGG | - | tig0018446:216672-216691 | Msa1366340:CDS | 35.0% | |
| ! | AGAAGAGACTGGAACACTTT+TGG | - | tig0018446:216373-216392 | Msa1366340:CDS | 40.0% |
| ! | GGAAGTCTTGATGCATTGAT+TGG | - | tig0018446:216577-216596 | Msa1366340:CDS | 40.0% |
| !!! | AGAGCTGCTTTTGAAGAGAA+TGG | - | tig0018446:216607-216626 | Msa1366340:CDS | 40.0% |
| !! | CTGCTTTTGAAGAGAATGGT+GGG | - | tig0018446:216611-216630 | Msa1366340:CDS | 40.0% |
| GACTCTTTCTTCGTGAAGTT+AGG | - | tig0018446:216671-216690 | Msa1366340:CDS | 40.0% | |
| ! | GACTCTCAATCTAAAGCTAG+AGG | - | tig0018446:216694-216713 | Msa1366340:CDS | 40.0% |
| !! | TTAGTTGCATTTGATGGTGG+TGG | + | tig0018446:216769-216788 | None:intergenic | 40.0% |
| !! | GTCTTCTGAGGTTGTTGTGT+TGG | + | tig0018446:216263-216282 | None:intergenic | 45.0% |
| ! | CTTAGAGTGTTTGTCGTTGC+TGG | + | tig0018446:216334-216353 | None:intergenic | 45.0% |
| GTGGTGGTCTATGGTTTCTT+AGG | + | tig0018446:216405-216424 | None:intergenic | 45.0% | |
| AGAGTGAAAGTGGTGGTCTA+TGG | + | tig0018446:216414-216433 | None:intergenic | 45.0% | |
| CTACAACGTGAGAGTGAAAG+TGG | + | tig0018446:216424-216443 | None:intergenic | 45.0% | |
| CTTTCACTCTCACGTTGTAG+TGG | - | tig0018446:216424-216443 | Msa1366340:CDS | 45.0% | |
| TTGTCCTCTCAGACAAGCTT+GGG | - | tig0018446:216555-216574 | Msa1366340:CDS | 45.0% | |
| !!! | GCTGCTTTTGAAGAGAATGG+TGG | - | tig0018446:216610-216629 | Msa1366340:CDS | 45.0% |
| GCACCAAAAGGGTTATCTTC+AGG | + | tig0018446:216640-216659 | None:intergenic | 45.0% | |
| TAACAGCACGAGCACCAAAA+GGG | + | tig0018446:216651-216670 | None:intergenic | 45.0% | |
| ! | AGAGTGTTTGTCGTTGCTGG+TGG | + | tig0018446:216331-216350 | None:intergenic | 50.0% |
| CAACGTGAGAGTGAAAGTGG+TGG | + | tig0018446:216421-216440 | None:intergenic | 50.0% | |
| TGTCTGAGAGGACAAGGACA+AGG | + | tig0018446:216550-216569 | None:intergenic | 50.0% | |
| CAAGCTTGTCTGAGAGGACA+AGG | + | tig0018446:216556-216575 | None:intergenic | 50.0% | |
| CTTGTCCTCTCAGACAAGCT+TGG | - | tig0018446:216554-216573 | Msa1366340:CDS | 50.0% | |
| TGTCCTCTCAGACAAGCTTG+GGG | - | tig0018446:216556-216575 | Msa1366340:CDS | 50.0% | |
| CTAACAGCACGAGCACCAAA+AGG | + | tig0018446:216652-216671 | None:intergenic | 50.0% | |
| !! | GGTGGTGGAGGTTGAATTTG+AGG | + | tig0018446:216751-216770 | None:intergenic | 50.0% |
| !! | GTTGCATTTGATGGTGGTGG+TGG | + | tig0018446:216766-216785 | None:intergenic | 50.0% |
| ! | GGACAAGGTGCAGGTGGATT+TGG | + | tig0018446:216535-216554 | None:intergenic | 55.0% |
| AGAGGACAAGGACAAGGTGC+AGG | + | tig0018446:216544-216563 | None:intergenic | 55.0% | |
| CTTCCCCAAGCTTGTCTGAG+AGG | + | tig0018446:216562-216581 | None:intergenic | 55.0% | |
| !! | GCATTTGATGGTGGTGGTGG+AGG | + | tig0018446:216763-216782 | None:intergenic | 55.0% |
| GGACAAGGACAAGGTGCAGG+TGG | + | tig0018446:216541-216560 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018446 | gene | 216190 | 216792 | 216190 | ID=Msa1366340;Name=Msa1366340 |
| tig0018446 | mRNA | 216190 | 216792 | 216190 | ID=Msa1366340-mRNA-1;Parent=Msa1366340;Name=Msa1366340-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|200 |
| tig0018446 | exon | 216190 | 216792 | 216190 | ID=Msa1366340-mRNA-1:exon:15105;Parent=Msa1366340-mRNA-1 |
| tig0018446 | CDS | 216190 | 216792 | 216190 | ID=Msa1366340-mRNA-1:cds;Parent=Msa1366340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
