Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139060 | XP_024639157.1 | 61.967 | 539 | 145 | 6 | 15 | 499 | 3 | 535 | 0.0 | 625 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139060 | G7K4M4 | 61.326 | 543 | 146 | 6 | 15 | 499 | 3 | 539 | 0.0 | 624 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000190 | Msa0139060 | 0.831734 | 1.411597e-55 | -8.615850e-47 |
Msa0003700 | Msa0139060 | 0.802344 | 5.866777e-49 | -8.615850e-47 |
Msa0003890 | Msa0139060 | 0.829166 | 5.991752e-55 | -8.615850e-47 |
Msa0006070 | Msa0139060 | 0.802796 | 4.733859e-49 | -8.615850e-47 |
Msa0010890 | Msa0139060 | 0.802066 | 6.690464e-49 | -8.615850e-47 |
Msa0012530 | Msa0139060 | 0.818211 | 2.206109e-52 | -8.615850e-47 |
Msa0017510 | Msa0139060 | 0.862582 | 4.576166e-64 | -8.615850e-47 |
Msa0021510 | Msa0139060 | 0.823606 | 1.265564e-53 | -8.615850e-47 |
Msa0024550 | Msa0139060 | 0.826288 | 2.945882e-54 | -8.615850e-47 |
Msa0025330 | Msa0139060 | 0.801467 | 8.881890e-49 | -8.615850e-47 |
Msa0026800 | Msa0139060 | 0.807516 | 4.865672e-50 | -8.615850e-47 |
Msa0028640 | Msa0139060 | 0.832470 | 9.281266e-56 | -8.615850e-47 |
Msa0032430 | Msa0139060 | 0.818327 | 2.077001e-52 | -8.615850e-47 |
Msa0047030 | Msa0139060 | 0.811763 | 5.949386e-51 | -8.615850e-47 |
Msa0047070 | Msa0139060 | 0.817992 | 2.472858e-52 | -8.615850e-47 |
Msa0050390 | Msa0139060 | 0.826330 | 2.878288e-54 | -8.615850e-47 |
Msa0054480 | Msa0139060 | 0.808060 | 3.728245e-50 | -8.615850e-47 |
Msa0061290 | Msa0139060 | 0.809067 | 2.272977e-50 | -8.615850e-47 |
Msa0061380 | Msa0139060 | 0.815287 | 9.985456e-52 | -8.615850e-47 |
Msa0063890 | Msa0139060 | 0.814405 | 1.566361e-51 | -8.615850e-47 |
Msa0074240 | Msa0139060 | 0.829495 | 4.985235e-55 | -8.615850e-47 |
Msa0075220 | Msa0139060 | 0.817718 | 2.851112e-52 | -8.615850e-47 |
Msa0079380 | Msa0139060 | 0.816354 | 5.773684e-52 | -8.615850e-47 |
Msa0080090 | Msa0139060 | 0.801267 | 9.759304e-49 | -8.615850e-47 |
Msa0089630 | Msa0139060 | 0.831627 | 1.499969e-55 | -8.615850e-47 |
Msa0094140 | Msa0139060 | 0.806691 | 7.275303e-50 | -8.615850e-47 |
Msa0101440 | Msa0139060 | 0.815989 | 6.967502e-52 | -8.615850e-47 |
Msa0101810 | Msa0139060 | -0.808297 | 3.318901e-50 | -8.615850e-47 |
Msa0107020 | Msa0139060 | 0.805044 | 1.614551e-49 | -8.615850e-47 |
Msa0107180 | Msa0139060 | 0.804770 | 1.842069e-49 | -8.615850e-47 |
Msa0110970 | Msa0139060 | 0.815337 | 9.737663e-52 | -8.615850e-47 |
Msa0114060 | Msa0139060 | 0.811445 | 6.975851e-51 | -8.615850e-47 |
Msa0115000 | Msa0139060 | 0.809557 | 1.784042e-50 | -8.615850e-47 |
Msa0115080 | Msa0139060 | 0.800478 | 1.414732e-48 | -8.615850e-47 |
Msa0116770 | Msa0139060 | 0.804399 | 2.201242e-49 | -8.615850e-47 |
Msa0120400 | Msa0139060 | 0.837826 | 4.133528e-57 | -8.615850e-47 |
Msa0121090 | Msa0139060 | 0.801533 | 8.609311e-49 | -8.615850e-47 |
Msa0124060 | Msa0139060 | 0.813077 | 3.072061e-51 | -8.615850e-47 |
Msa0139060 | Msa0142220 | 0.805769 | 1.137713e-49 | -8.615850e-47 |
Msa0139060 | Msa0142310 | 0.815799 | 7.683414e-52 | -8.615850e-47 |
Msa0139060 | Msa0145440 | 0.803407 | 3.538327e-49 | -8.615850e-47 |
Msa0139060 | Msa0152430 | 0.814594 | 1.422906e-51 | -8.615850e-47 |
Msa0139060 | Msa0153910 | 0.801920 | 7.169936e-49 | -8.615850e-47 |
Msa0139060 | Msa0157290 | 0.863163 | 3.029342e-64 | -8.615850e-47 |
Msa0139060 | Msa0164330 | 0.805867 | 1.084673e-49 | -8.615850e-47 |
Msa0139060 | Msa0165210 | 0.807500 | 4.903362e-50 | -8.615850e-47 |
Msa0139060 | Msa0165220 | 0.802723 | 4.899294e-49 | -8.615850e-47 |
Msa0139060 | Msa0166560 | 0.809887 | 1.514891e-50 | -8.615850e-47 |
Msa0139060 | Msa0167520 | 0.806963 | 6.373134e-50 | -8.615850e-47 |
Msa0139060 | Msa0168500 | 0.818020 | 2.436656e-52 | -8.615850e-47 |
Msa0139060 | Msa0171540 | 0.803008 | 4.278554e-49 | -8.615850e-47 |
Msa0139060 | Msa0172070 | 0.811711 | 6.107787e-51 | -8.615850e-47 |
Msa0139060 | Msa0175780 | 0.801823 | 7.508512e-49 | -8.615850e-47 |
Msa0139060 | Msa0200260 | 0.822310 | 2.537000e-53 | -8.615850e-47 |
Msa0139060 | Msa0202950 | 0.805520 | 1.283297e-49 | -8.615850e-47 |
Msa0139060 | Msa0211150 | 0.840970 | 6.309283e-58 | -8.615850e-47 |
Msa0139060 | Msa0212990 | 0.824355 | 8.444469e-54 | -8.615850e-47 |
Msa0139060 | Msa0215320 | -0.817846 | 2.667911e-52 | -8.615850e-47 |
Msa0139060 | Msa0215680 | 0.806586 | 7.656471e-50 | -8.615850e-47 |
Msa0139060 | Msa0216910 | 0.808333 | 3.260940e-50 | -8.615850e-47 |
Msa0139060 | Msa0220740 | 0.826508 | 2.610029e-54 | -8.615850e-47 |
Msa0139060 | Msa0223690 | 0.806576 | 7.691976e-50 | -8.615850e-47 |
Msa0139060 | Msa0224780 | 0.802486 | 5.484353e-49 | -8.615850e-47 |
Msa0139060 | Msa0225680 | 0.800032 | 1.743452e-48 | -8.615850e-47 |
Msa0139060 | Msa0225760 | 0.802974 | 4.349181e-49 | -8.615850e-47 |
Msa0139060 | Msa0230740 | 0.804343 | 2.261282e-49 | -8.615850e-47 |
Msa0139060 | Msa0243100 | 0.819122 | 1.370525e-52 | -8.615850e-47 |
Msa0139060 | Msa0243890 | 0.809627 | 1.723480e-50 | -8.615850e-47 |
Msa0139060 | Msa0244860 | 0.801167 | 1.023037e-48 | -8.615850e-47 |
Msa0139060 | Msa0258310 | 0.807348 | 5.280488e-50 | -8.615850e-47 |
Msa0139060 | Msa0261340 | 0.853348 | 2.536145e-61 | -8.615850e-47 |
Msa0139060 | Msa0279700 | 0.800792 | 1.220396e-48 | -8.615850e-47 |
Msa0139060 | Msa0282460 | 0.800254 | 1.571116e-48 | -8.615850e-47 |
Msa0139060 | Msa0283450 | 0.812822 | 3.494043e-51 | -8.615850e-47 |
Msa0139060 | Msa0284420 | 0.812916 | 3.332993e-51 | -8.615850e-47 |
Msa0139060 | Msa0291540 | 0.822276 | 2.583590e-53 | -8.615850e-47 |
Msa0139060 | Msa0292400 | 0.822186 | 2.710475e-53 | -8.615850e-47 |
Msa0139060 | Msa0300690 | 0.808609 | 2.847059e-50 | -8.615850e-47 |
Msa0139060 | Msa0330340 | 0.820463 | 6.768800e-53 | -8.615850e-47 |
Msa0139060 | Msa0332000 | 0.814829 | 1.262202e-51 | -8.615850e-47 |
Msa0139060 | Msa0340450 | 0.826129 | 3.213607e-54 | -8.615850e-47 |
Msa0139060 | Msa0342310 | 0.814045 | 1.881087e-51 | -8.615850e-47 |
Msa0139060 | Msa0345970 | 0.836550 | 8.763028e-57 | -8.615850e-47 |
Msa0139060 | Msa0351110 | 0.803429 | 3.500732e-49 | -8.615850e-47 |
Msa0139060 | Msa0355220 | 0.816378 | 5.703179e-52 | -8.615850e-47 |
Msa0139060 | Msa0357320 | 0.801075 | 1.068153e-48 | -8.615850e-47 |
Msa0139060 | Msa0357340 | 0.858682 | 6.968639e-63 | -8.615850e-47 |
Msa0139060 | Msa0363070 | 0.819350 | 1.216157e-52 | -8.615850e-47 |
Msa0139060 | Msa0363200 | 0.806310 | 8.751208e-50 | -8.615850e-47 |
Msa0139060 | Msa0367870 | 0.803486 | 3.406975e-49 | -8.615850e-47 |
Msa0139060 | Msa0376350 | 0.826176 | 3.131794e-54 | -8.615850e-47 |
Msa0139060 | Msa0378720 | 0.815326 | 9.790997e-52 | -8.615850e-47 |
Msa0139060 | Msa0381610 | -0.800260 | 1.566760e-48 | -8.615850e-47 |
Msa0139060 | Msa0386090 | 0.814501 | 1.492038e-51 | -8.615850e-47 |
Msa0139060 | Msa0388960 | 0.816858 | 4.452438e-52 | -8.615850e-47 |
Msa0139060 | Msa0390400 | -0.800729 | 1.257043e-48 | -8.615850e-47 |
Msa0139060 | Msa0392510 | 0.845167 | 4.807205e-59 | -8.615850e-47 |
Msa0139060 | Msa0393080 | 0.823402 | 1.412233e-53 | -8.615850e-47 |
Msa0139060 | Msa0395570 | 0.820578 | 6.370341e-53 | -8.615850e-47 |
Msa0139060 | Msa0395790 | 0.806967 | 6.358594e-50 | -8.615850e-47 |
Msa0139060 | Msa0397750 | 0.807521 | 4.853293e-50 | -8.615850e-47 |
Msa0139060 | Msa0402290 | 0.821686 | 3.539337e-53 | -8.615850e-47 |
Msa0139060 | Msa0404190 | 0.802887 | 4.532962e-49 | -8.615850e-47 |
Msa0139060 | Msa0410650 | 0.820869 | 5.459462e-53 | -8.615850e-47 |
Msa0139060 | Msa0417270 | 0.803761 | 2.986952e-49 | -8.615850e-47 |
Msa0139060 | Msa0417880 | 0.814421 | 1.553843e-51 | -8.615850e-47 |
Msa0139060 | Msa0422850 | 0.803218 | 3.871477e-49 | -8.615850e-47 |
Msa0139060 | Msa0422930 | 0.806187 | 9.293150e-50 | -8.615850e-47 |
Msa0139060 | Msa0424790 | 0.832767 | 7.831691e-56 | -8.615850e-47 |
Msa0139060 | Msa0428080 | 0.805492 | 1.300273e-49 | -8.615850e-47 |
Msa0139060 | Msa0428590 | 0.805955 | 1.039554e-49 | -8.615850e-47 |
Msa0139060 | Msa0436780 | 0.806915 | 6.521644e-50 | -8.615850e-47 |
Msa0139060 | Msa0437560 | 0.803450 | 3.465917e-49 | -8.615850e-47 |
Msa0139060 | Msa0437990 | 0.804699 | 1.906085e-49 | -8.615850e-47 |
Msa0139060 | Msa0440750 | 0.839193 | 1.833807e-57 | -8.615850e-47 |
Msa0139060 | Msa0443260 | 0.810844 | 9.417475e-51 | -8.615850e-47 |
Msa0139060 | Msa0450720 | 0.800610 | 1.329400e-48 | -8.615850e-47 |
Msa0139060 | Msa0464680 | 0.842492 | 2.501201e-58 | -8.615850e-47 |
Msa0139060 | Msa0465410 | 0.822469 | 2.330100e-53 | -8.615850e-47 |
Msa0139060 | Msa0467490 | 0.835515 | 1.604665e-56 | -8.615850e-47 |
Msa0139060 | Msa0481530 | 0.805743 | 1.152239e-49 | -8.615850e-47 |
Msa0139060 | Msa0487420 | 0.808629 | 2.819132e-50 | -8.615850e-47 |
Msa0139060 | Msa0488560 | 0.839324 | 1.695804e-57 | -8.615850e-47 |
Msa0139060 | Msa0490390 | 0.801482 | 8.820255e-49 | -8.615850e-47 |
Msa0139060 | Msa0490730 | -0.805488 | 1.303288e-49 | -8.615850e-47 |
Msa0139060 | Msa0498060 | 0.820455 | 6.797029e-53 | -8.615850e-47 |
Msa0139060 | Msa0503580 | 0.814030 | 1.895560e-51 | -8.615850e-47 |
Msa0139060 | Msa0504610 | 0.813323 | 2.712938e-51 | -8.615850e-47 |
Msa0139060 | Msa0507680 | 0.822121 | 2.805522e-53 | -8.615850e-47 |
Msa0139060 | Msa0511270 | 0.822858 | 1.891576e-53 | -8.615850e-47 |
Msa0139060 | Msa0516170 | 0.825145 | 5.499465e-54 | -8.615850e-47 |
Msa0139060 | Msa0523940 | 0.801123 | 1.044621e-48 | -8.615850e-47 |
Msa0139060 | Msa0524190 | 0.800438 | 1.440894e-48 | -8.615850e-47 |
Msa0139060 | Msa0529890 | 0.817410 | 3.346524e-52 | -8.615850e-47 |
Msa0139060 | Msa0547900 | 0.805106 | 1.566735e-49 | -8.615850e-47 |
Msa0139060 | Msa0548170 | 0.801892 | 7.265710e-49 | -8.615850e-47 |
Msa0139060 | Msa0569200 | 0.812917 | 3.330643e-51 | -8.615850e-47 |
Msa0139060 | Msa0585300 | 0.824012 | 1.016183e-53 | -8.615850e-47 |
Msa0139060 | Msa0585560 | 0.817923 | 2.563534e-52 | -8.615850e-47 |
Msa0139060 | Msa0600700 | 0.819476 | 1.138531e-52 | -8.615850e-47 |
Msa0139060 | Msa0601750 | 0.816612 | 5.054573e-52 | -8.615850e-47 |
Msa0139060 | Msa0602240 | 0.827336 | 1.655018e-54 | -8.615850e-47 |
Msa0139060 | Msa0602250 | 0.827587 | 1.441100e-54 | -8.615850e-47 |
Msa0139060 | Msa0602460 | 0.805665 | 1.196444e-49 | -8.615850e-47 |
Msa0139060 | Msa0602880 | 0.801258 | 9.803528e-49 | -8.615850e-47 |
Msa0139060 | Msa0616160 | 0.800746 | 1.247367e-48 | -8.615850e-47 |
Msa0139060 | Msa0625190 | 0.800168 | 1.635905e-48 | -8.615850e-47 |
Msa0139060 | Msa0625720 | 0.817660 | 2.939208e-52 | -8.615850e-47 |
Msa0139060 | Msa0626490 | 0.800258 | 1.567767e-48 | -8.615850e-47 |
Msa0139060 | Msa0626510 | 0.818100 | 2.337455e-52 | -8.615850e-47 |
Msa0139060 | Msa0627450 | 0.814301 | 1.652266e-51 | -8.615850e-47 |
Msa0139060 | Msa0632740 | 0.808860 | 2.516509e-50 | -8.615850e-47 |
Msa0139060 | Msa0641290 | 0.815944 | 7.129658e-52 | -8.615850e-47 |
Msa0139060 | Msa0643940 | 0.809535 | 1.803238e-50 | -8.615850e-47 |
Msa0139060 | Msa0648880 | 0.810441 | 1.151166e-50 | -8.615850e-47 |
Msa0139060 | Msa0657970 | 0.847626 | 1.026972e-59 | -8.615850e-47 |
Msa0139060 | Msa0661650 | 0.827229 | 1.755230e-54 | -8.615850e-47 |
Msa0139060 | Msa0663380 | 0.805763 | 1.141121e-49 | -8.615850e-47 |
Msa0139060 | Msa0663390 | 0.818981 | 1.475923e-52 | -8.615850e-47 |
Msa0139060 | Msa0669320 | 0.844278 | 8.347606e-59 | -8.615850e-47 |
Msa0139060 | Msa0677410 | 0.804569 | 2.028784e-49 | -8.615850e-47 |
Msa0139060 | Msa0681250 | 0.801380 | 9.252719e-49 | -8.615850e-47 |
Msa0139060 | Msa0681270 | 0.810354 | 1.201640e-50 | -8.615850e-47 |
Msa0139060 | Msa0683510 | 0.815218 | 1.034539e-51 | -8.615850e-47 |
Msa0139060 | Msa0683570 | 0.801637 | 8.197380e-49 | -8.615850e-47 |
Msa0139060 | Msa0691380 | 0.820103 | 8.184098e-53 | -8.615850e-47 |
Msa0139060 | Msa0696390 | 0.800223 | 1.594112e-48 | -8.615850e-47 |
Msa0139060 | Msa0698920 | 0.824020 | 1.011930e-53 | -8.615850e-47 |
Msa0139060 | Msa0701900 | 0.801150 | 1.031322e-48 | -8.615850e-47 |
Msa0139060 | Msa0730430 | 0.814281 | 1.668790e-51 | -8.615850e-47 |
Msa0139060 | Msa0731940 | 0.827641 | 1.398655e-54 | -8.615850e-47 |
Msa0139060 | Msa0733390 | 0.817224 | 3.685268e-52 | -8.615850e-47 |
Msa0139060 | Msa0735170 | 0.817052 | 4.026730e-52 | -8.615850e-47 |
Msa0139060 | Msa0737120 | 0.813761 | 2.172846e-51 | -8.615850e-47 |
Msa0139060 | Msa0740510 | 0.801037 | 1.087823e-48 | -8.615850e-47 |
Msa0139060 | Msa0741840 | 0.826892 | 2.113695e-54 | -8.615850e-47 |
Msa0139060 | Msa0743720 | 0.807817 | 4.199850e-50 | -8.615850e-47 |
Msa0139060 | Msa0743890 | 0.937413 | 3.607731e-98 | -8.615850e-47 |
Msa0139060 | Msa0745790 | 0.815486 | 9.017684e-52 | -8.615850e-47 |
Msa0139060 | Msa0748020 | 0.801895 | 7.257435e-49 | -8.615850e-47 |
Msa0139060 | Msa0760130 | 0.811617 | 6.401714e-51 | -8.615850e-47 |
Msa0139060 | Msa0767300 | 0.805996 | 1.019186e-49 | -8.615850e-47 |
Msa0139060 | Msa0769180 | 0.817671 | 2.921502e-52 | -8.615850e-47 |
Msa0139060 | Msa0769920 | 0.829190 | 5.911811e-55 | -8.615850e-47 |
Msa0139060 | Msa0770720 | 0.804559 | 2.037768e-49 | -8.615850e-47 |
Msa0139060 | Msa0786500 | 0.842830 | 2.034806e-58 | -8.615850e-47 |
Msa0139060 | Msa0793800 | 0.802215 | 6.236687e-49 | -8.615850e-47 |
Msa0139060 | Msa0810220 | 0.807126 | 5.884427e-50 | -8.615850e-47 |
Msa0139060 | Msa0816150 | 0.909076 | 8.495613e-82 | -8.615850e-47 |
Msa0139060 | Msa0816710 | 0.802870 | 4.570137e-49 | -8.615850e-47 |
Msa0139060 | Msa0816910 | 0.808953 | 2.403667e-50 | -8.615850e-47 |
Msa0139060 | Msa0820770 | 0.802960 | 4.377335e-49 | -8.615850e-47 |
Msa0139060 | Msa0822870 | 0.835099 | 2.044087e-56 | -8.615850e-47 |
Msa0139060 | Msa0824840 | 0.901292 | 3.104009e-78 | -8.615850e-47 |
Msa0139060 | Msa0828560 | 0.831032 | 2.100454e-55 | -8.615850e-47 |
Msa0139060 | Msa0834770 | 0.809835 | 1.554847e-50 | -8.615850e-47 |
Msa0139060 | Msa0838580 | 0.817419 | 3.329392e-52 | -8.615850e-47 |
Msa0139060 | Msa0843220 | 0.805190 | 1.504288e-49 | -8.615850e-47 |
Msa0139060 | Msa0844490 | 0.802439 | 5.608377e-49 | -8.615850e-47 |
Msa0139060 | Msa0844570 | 0.805922 | 1.056579e-49 | -8.615850e-47 |
Msa0139060 | Msa0861090 | 0.800188 | 1.620642e-48 | -8.615850e-47 |
Msa0139060 | Msa0861600 | 0.802720 | 4.907277e-49 | -8.615850e-47 |
Msa0139060 | Msa0861870 | 0.807959 | 3.917377e-50 | -8.615850e-47 |
Msa0139060 | Msa0870640 | 0.848308 | 6.660156e-60 | -8.615850e-47 |
Msa0139060 | Msa0871260 | 0.800262 | 1.564954e-48 | -8.615850e-47 |
Msa0139060 | Msa0871270 | 0.813049 | 3.115238e-51 | -8.615850e-47 |
Msa0139060 | Msa0875290 | 0.806794 | 6.919071e-50 | -8.615850e-47 |
Msa0139060 | Msa0876190 | 0.816218 | 6.193683e-52 | -8.615850e-47 |
Msa0139060 | Msa0880140 | 0.859111 | 5.185590e-63 | -8.615850e-47 |
Msa0139060 | Msa0885280 | 0.801501 | 8.738694e-49 | -8.615850e-47 |
Msa0139060 | Msa0890320 | 0.831053 | 2.075161e-55 | -8.615850e-47 |
Msa0139060 | Msa0899980 | 0.805873 | 1.081832e-49 | -8.615850e-47 |
Msa0139060 | Msa0909120 | 0.841610 | 4.280353e-58 | -8.615850e-47 |
Msa0139060 | Msa0909140 | 0.816129 | 6.482812e-52 | -8.615850e-47 |
Msa0139060 | Msa0918220 | 0.803939 | 2.743947e-49 | -8.615850e-47 |
Msa0139060 | Msa0925180 | 0.806851 | 6.728543e-50 | -8.615850e-47 |
Msa0139060 | Msa0926890 | 0.802171 | 6.365995e-49 | -8.615850e-47 |
Msa0139060 | Msa0938210 | 0.804716 | 1.890516e-49 | -8.615850e-47 |
Msa0139060 | Msa0938220 | 0.826040 | 3.374060e-54 | -8.615850e-47 |
Msa0139060 | Msa0945110 | 0.827766 | 1.305176e-54 | -8.615850e-47 |
Msa0139060 | Msa0947660 | 0.813873 | 2.053040e-51 | -8.615850e-47 |
Msa0139060 | Msa0948290 | 0.816778 | 4.640984e-52 | -8.615850e-47 |
Msa0139060 | Msa0952120 | 0.800224 | 1.593649e-48 | -8.615850e-47 |
Msa0139060 | Msa0955080 | 0.817359 | 3.435415e-52 | -8.615850e-47 |
Msa0139060 | Msa0959360 | 0.812906 | 3.349684e-51 | -8.615850e-47 |
Msa0139060 | Msa0963270 | 0.804246 | 2.368332e-49 | -8.615850e-47 |
Msa0139060 | Msa0965360 | 0.810015 | 1.422134e-50 | -8.615850e-47 |
Msa0139060 | Msa0965490 | 0.800315 | 1.526947e-48 | -8.615850e-47 |
Msa0139060 | Msa0965610 | 0.800977 | 1.118642e-48 | -8.615850e-47 |
Msa0139060 | Msa0967380 | 0.826965 | 2.030951e-54 | -8.615850e-47 |
Msa0139060 | Msa0969520 | 0.824596 | 7.411106e-54 | -8.615850e-47 |
Msa0139060 | Msa0974070 | 0.806076 | 9.803021e-50 | -8.615850e-47 |
Msa0139060 | Msa0995270 | 0.804984 | 1.661495e-49 | -8.615850e-47 |
Msa0139060 | Msa0999870 | 0.805392 | 1.364856e-49 | -8.615850e-47 |
Msa0139060 | Msa1002000 | 0.805378 | 1.374076e-49 | -8.615850e-47 |
Msa0139060 | Msa1003620 | 0.801186 | 1.014204e-48 | -8.615850e-47 |
Msa0139060 | Msa1004840 | 0.802749 | 4.839035e-49 | -8.615850e-47 |
Msa0139060 | Msa1014540 | 0.824390 | 8.285177e-54 | -8.615850e-47 |
Msa0139060 | Msa1019000 | 0.824099 | 9.696743e-54 | -8.615850e-47 |
Msa0139060 | Msa1019150 | 0.819573 | 1.082133e-52 | -8.615850e-47 |
Msa0139060 | Msa1019430 | 0.831763 | 1.388076e-55 | -8.615850e-47 |
Msa0139060 | Msa1019470 | 0.834845 | 2.367864e-56 | -8.615850e-47 |
Msa0139060 | Msa1020670 | 0.811312 | 7.456020e-51 | -8.615850e-47 |
Msa0139060 | Msa1029250 | 0.818193 | 2.226954e-52 | -8.615850e-47 |
Msa0139060 | Msa1030970 | 0.812357 | 4.415081e-51 | -8.615850e-47 |
Msa0139060 | Msa1045140 | 0.809117 | 2.216641e-50 | -8.615850e-47 |
Msa0139060 | Msa1045200 | 0.808443 | 3.089630e-50 | -8.615850e-47 |
Msa0139060 | Msa1051830 | 0.803685 | 3.097932e-49 | -8.615850e-47 |
Msa0139060 | Msa1075220 | -0.814840 | 1.255195e-51 | -8.615850e-47 |
Msa0139060 | Msa1075540 | 0.822127 | 2.796651e-53 | -8.615850e-47 |
Msa0139060 | Msa1075650 | 0.814425 | 1.551135e-51 | -8.615850e-47 |
Msa0139060 | Msa1082500 | 0.803288 | 3.744704e-49 | -8.615850e-47 |
Msa0139060 | Msa1084960 | 0.813003 | 3.188337e-51 | -8.615850e-47 |
Msa0139060 | Msa1085200 | 0.821927 | 3.111350e-53 | -8.615850e-47 |
Msa0139060 | Msa1089940 | 0.801428 | 9.044659e-49 | -8.615850e-47 |
Msa0139060 | Msa1100050 | 0.804359 | 2.243620e-49 | -8.615850e-47 |
Msa0139060 | Msa1104090 | 0.822918 | 1.831248e-53 | -8.615850e-47 |
Msa0139060 | Msa1111090 | 0.803621 | 3.194354e-49 | -8.615850e-47 |
Msa0139060 | Msa1111130 | 0.819547 | 1.096770e-52 | -8.615850e-47 |
Msa0139060 | Msa1113170 | 0.804447 | 2.150686e-49 | -8.615850e-47 |
Msa0139060 | Msa1116130 | -0.800981 | 1.116857e-48 | -8.615850e-47 |
Msa0139060 | Msa1117660 | 0.803640 | 3.165511e-49 | -8.615850e-47 |
Msa0139060 | Msa1121480 | 0.806525 | 7.884041e-50 | -8.615850e-47 |
Msa0139060 | Msa1121490 | 0.834809 | 2.418547e-56 | -8.615850e-47 |
Msa0139060 | Msa1122520 | 0.800175 | 1.630601e-48 | -8.615850e-47 |
Msa0139060 | Msa1137570 | 0.827984 | 1.156813e-54 | -8.615850e-47 |
Msa0139060 | Msa1140210 | 0.821049 | 4.963693e-53 | -8.615850e-47 |
Msa0139060 | Msa1142020 | 0.808054 | 3.739845e-50 | -8.615850e-47 |
Msa0139060 | Msa1147740 | 0.818736 | 1.677424e-52 | -8.615850e-47 |
Msa0139060 | Msa1151910 | 0.828653 | 7.976060e-55 | -8.615850e-47 |
Msa0139060 | Msa1154710 | 0.835754 | 1.395737e-56 | -8.615850e-47 |
Msa0139060 | Msa1162550 | -0.811415 | 7.081828e-51 | -8.615850e-47 |
Msa0139060 | Msa1169000 | 0.805992 | 1.021212e-49 | -8.615850e-47 |
Msa0139060 | Msa1171710 | 0.816734 | 4.747029e-52 | -8.615850e-47 |
Msa0139060 | Msa1173100 | 0.804662 | 1.940253e-49 | -8.615850e-47 |
Msa0139060 | Msa1186060 | 0.807246 | 5.552514e-50 | -8.615850e-47 |
Msa0139060 | Msa1189070 | 0.804597 | 2.001117e-49 | -8.615850e-47 |
Msa0139060 | Msa1190400 | 0.822215 | 2.668905e-53 | -8.615850e-47 |
Msa0139060 | Msa1199570 | 0.801681 | 8.027954e-49 | -8.615850e-47 |
Msa0139060 | Msa1199830 | -0.806001 | 1.016821e-49 | -8.615850e-47 |
Msa0139060 | Msa1209460 | 0.823605 | 1.266234e-53 | -8.615850e-47 |
Msa0139060 | Msa1215050 | 0.822475 | 2.322424e-53 | -8.615850e-47 |
Msa0139060 | Msa1222850 | 0.807162 | 5.784314e-50 | -8.615850e-47 |
Msa0139060 | Msa1223470 | 0.809230 | 2.096421e-50 | -8.615850e-47 |
Msa0139060 | Msa1226660 | 0.819442 | 1.159151e-52 | -8.615850e-47 |
Msa0139060 | Msa1229500 | 0.810220 | 1.284809e-50 | -8.615850e-47 |
Msa0139060 | Msa1236410 | 0.815067 | 1.117694e-51 | -8.615850e-47 |
Msa0139060 | Msa1238930 | 0.803730 | 3.032162e-49 | -8.615850e-47 |
Msa0139060 | Msa1242220 | 0.801702 | 7.950690e-49 | -8.615850e-47 |
Msa0139060 | Msa1242670 | 0.830691 | 2.546520e-55 | -8.615850e-47 |
Msa0139060 | Msa1244250 | 0.811869 | 5.640657e-51 | -8.615850e-47 |
Msa0139060 | Msa1253000 | 0.806132 | 9.541575e-50 | -8.615850e-47 |
Msa0139060 | Msa1253020 | 0.808864 | 2.512130e-50 | -8.615850e-47 |
Msa0139060 | Msa1269480 | 0.818863 | 1.569827e-52 | -8.615850e-47 |
Msa0139060 | Msa1271290 | 0.809961 | 1.460581e-50 | -8.615850e-47 |
Msa0139060 | Msa1277660 | 0.809244 | 2.082756e-50 | -8.615850e-47 |
Msa0139060 | Msa1283860 | 0.819688 | 1.018551e-52 | -8.615850e-47 |
Msa0139060 | Msa1284680 | 0.828523 | 8.574171e-55 | -8.615850e-47 |
Msa0139060 | Msa1297230 | 0.804680 | 1.922959e-49 | -8.615850e-47 |
Msa0139060 | Msa1300970 | 0.829491 | 4.996512e-55 | -8.615850e-47 |
Msa0139060 | Msa1302830 | 0.837422 | 5.246150e-57 | -8.615850e-47 |
Msa0139060 | Msa1308380 | 0.810633 | 1.046163e-50 | -8.615850e-47 |
Msa0139060 | Msa1309030 | 0.827175 | 1.809020e-54 | -8.615850e-47 |
Msa0139060 | Msa1313150 | 0.809431 | 1.898275e-50 | -8.615850e-47 |
Msa0139060 | Msa1322890 | 0.805399 | 1.360404e-49 | -8.615850e-47 |
Msa0139060 | Msa1324500 | 0.824366 | 8.394778e-54 | -8.615850e-47 |
Msa0139060 | Msa1327680 | 0.805597 | 1.236275e-49 | -8.615850e-47 |
Msa0139060 | Msa1328040 | 0.801956 | 7.050398e-49 | -8.615850e-47 |
Msa0139060 | Msa1328710 | 0.805130 | 1.548733e-49 | -8.615850e-47 |
Msa0139060 | Msa1330410 | 0.805382 | 1.371232e-49 | -8.615850e-47 |
Msa0139060 | Msa1332070 | 0.836632 | 8.350388e-57 | -8.615850e-47 |
Msa0139060 | Msa1333480 | 0.802386 | 5.749909e-49 | -8.615850e-47 |
Msa0139060 | Msa1336670 | 0.805897 | 1.069128e-49 | -8.615850e-47 |
Msa0139060 | Msa1342840 | 0.807082 | 6.014025e-50 | -8.615850e-47 |
Msa0139060 | Msa1357240 | 0.810083 | 1.374550e-50 | -8.615850e-47 |
Msa0139060 | Msa1359040 | 0.805452 | 1.325937e-49 | -8.615850e-47 |
Msa0139060 | Msa1360060 | 0.815577 | 8.610902e-52 | -8.615850e-47 |
Msa0139060 | Msa1366340 | 0.802333 | 5.895490e-49 | -8.615850e-47 |
Msa0139060 | Msa1366810 | 0.809657 | 1.698029e-50 | -8.615850e-47 |
Msa0139060 | Msa1367370 | 0.801331 | 9.468411e-49 | -8.615850e-47 |
Msa0139060 | Msa1369550 | 0.816430 | 5.551785e-52 | -8.615850e-47 |
Msa0139060 | Msa1372760 | 0.831992 | 1.218458e-55 | -8.615850e-47 |
Msa0139060 | Msa1373030 | 0.805390 | 1.366084e-49 | -8.615850e-47 |
Msa0139060 | Msa1374550 | 0.825325 | 4.986315e-54 | -8.615850e-47 |
Msa0139060 | Msa1387870 | 0.806961 | 6.378896e-50 | -8.615850e-47 |
Msa0139060 | Msa1392240 | 0.820972 | 5.170189e-53 | -8.615850e-47 |
Msa0139060 | Msa1397860 | 0.825828 | 3.787788e-54 | -8.615850e-47 |
Msa0139060 | Msa1409870 | 0.810719 | 1.002169e-50 | -8.615850e-47 |
Msa0139060 | Msa1409880 | 0.802967 | 4.362253e-49 | -8.615850e-47 |
Msa0139060 | Msa1410680 | 0.812437 | 4.241909e-51 | -8.615850e-47 |
Msa0139060 | Msa1419370 | 0.812733 | 3.653482e-51 | -8.615850e-47 |
Msa0139060 | Msa1422420 | 0.804234 | 2.381901e-49 | -8.615850e-47 |
Msa0139060 | Msa1423880 | 0.815382 | 9.513870e-52 | -8.615850e-47 |
Msa0139060 | Msa1424750 | 0.802557 | 5.301357e-49 | -8.615850e-47 |
Msa0139060 | Msa1438250 | 0.836889 | 7.181264e-57 | -8.615850e-47 |
Msa0139060 | Msa1440560 | 0.808291 | 3.328924e-50 | -8.615850e-47 |
Msa0139060 | Msa1443110 | 0.802145 | 6.444730e-49 | -8.615850e-47 |
Msa0139060 | Msa1448640 | 0.804559 | 2.038154e-49 | -8.615850e-47 |
Msa0139060 | Msa1464810 | 0.808353 | 3.229680e-50 | -8.615850e-47 |
Msa0139060 | Msa1466540 | 0.841819 | 3.769925e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139060 | MtrunA17_Chr5g0446191 | 56.554 | 534 | 164 | 10 | 26 | 499 | 20 | 545 | 0.0 | 533 |
Msa0139060 | MtrunA17_Chr5g0446231 | 55.229 | 545 | 169 | 13 | 22 | 499 | 1 | 537 | 0.0 | 528 |
Msa0139060 | MtrunA17_Chr5g0446171 | 72.917 | 144 | 38 | 1 | 1 | 143 | 1 | 144 | 9.26e-65 | 210 |
Msa0139060 | MtrunA17_Chr4g0012551 | 34.586 | 266 | 146 | 9 | 219 | 478 | 1 | 244 | 1.08e-35 | 133 |
Msa0139060 | MtrunA17_Chr5g0413371 | 61.207 | 116 | 37 | 1 | 18 | 133 | 2 | 109 | 5.17e-34 | 135 |
Msa0139060 | MtrunA17_Chr5g0445861 | 40.761 | 184 | 65 | 7 | 1 | 143 | 1 | 181 | 1.30e-24 | 106 |
Msa0139060 | MtrunA17_Chr5g0445831 | 42.169 | 166 | 67 | 3 | 1 | 144 | 1 | 159 | 1.30e-24 | 106 |
Msa0139060 | MtrunA17_Chr5g0445771 | 45.161 | 155 | 67 | 3 | 4 | 143 | 2 | 153 | 1.96e-24 | 106 |
Msa0139060 | MtrunA17_Chr6g0462331 | 28.239 | 301 | 180 | 10 | 221 | 500 | 8 | 293 | 1.08e-23 | 103 |
Msa0139060 | MtrunA17_Chr5g0445881 | 36.816 | 201 | 63 | 5 | 1 | 144 | 1 | 194 | 1.93e-22 | 100 |
Msa0139060 | MtrunA17_Chr6g0477621 | 37.333 | 150 | 85 | 3 | 328 | 474 | 11 | 154 | 1.28e-19 | 89.0 |
Msa0139060 | MtrunA17_Chr3g0085601 | 29.442 | 197 | 120 | 6 | 304 | 494 | 2 | 185 | 2.65e-18 | 85.9 |
Msa0139060 | MtrunA17_Chr1g0174681 | 37.037 | 108 | 61 | 2 | 371 | 478 | 11 | 111 | 7.82e-18 | 83.6 |
Msa0139060 | MtrunA17_Chr7g0226131 | 27.083 | 240 | 156 | 9 | 216 | 448 | 6 | 233 | 4.35e-17 | 80.5 |
Msa0139060 | MtrunA17_Chr5g0445961 | 32.184 | 174 | 83 | 4 | 1 | 142 | 1 | 171 | 3.95e-14 | 75.1 |
Msa0139060 | MtrunA17_Chr5g0416551 | 29.213 | 178 | 111 | 5 | 301 | 474 | 1 | 167 | 4.69e-14 | 71.2 |
Msa0139060 | MtrunA17_Chr5g0446181 | 40.141 | 142 | 62 | 4 | 1 | 126 | 1 | 135 | 4.17e-13 | 70.9 |
Msa0139060 | MtrunA17_Chr7g0215391 | 28.571 | 245 | 150 | 9 | 223 | 451 | 19 | 254 | 1.60e-12 | 69.7 |
Msa0139060 | MtrunA17_Chr1g0194781 | 28.571 | 245 | 150 | 9 | 223 | 451 | 19 | 254 | 1.60e-12 | 69.7 |
Msa0139060 | MtrunA17_Chr1g0202531 | 27.972 | 286 | 178 | 12 | 223 | 489 | 26 | 302 | 8.47e-12 | 67.4 |
Msa0139060 | MtrunA17_Chr5g0445811 | 36.842 | 190 | 49 | 8 | 1 | 144 | 1 | 165 | 1.58e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 116 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGACAACCCAGGTTCGATTT+TGG | 0.201779 | 1_3:+72269712 | None:intergenic |
GTTCTTTGCAAATGCATATC+TGG | 0.205513 | 1_3:-72266724 | Msa0139060:CDS |
AGAGCACTATTCGAAGTTTC+TGG | 0.226886 | 1_3:-72266886 | Msa0139060:CDS |
AAAATTATCAATGGATTGTT+TGG | 0.246344 | 1_3:-72266615 | Msa0139060:CDS |
TTATAGTTCCCATCTTCTTT+AGG | 0.261328 | 1_3:+72266696 | None:intergenic |
TTATGTCATTTAAGTTATAA+TGG | 0.279777 | 1_3:+72266131 | None:intergenic |
AGGGTTGGGGTTGCCCATTT+TGG | 0.308578 | 1_3:-72268275 | Msa0139060:CDS |
GTACAAATTCTCAGATATTC+AGG | 0.317285 | 1_3:-72266820 | Msa0139060:CDS |
CATTGACTGGTTCGCCCTTA+AGG | 0.319854 | 1_3:+72266334 | None:intergenic |
TAGAGGGTTCACGTCCAAAA+TGG | 0.327794 | 1_3:+72268261 | None:intergenic |
CTTCCTAACCCAATCGGCCT+CGG | 0.330220 | 1_3:+72266500 | None:intergenic |
GTCTCCTAGCAAATGACCTT+CGG | 0.339559 | 1_3:-72266305 | Msa0139060:CDS |
CTTGATAACTGCAATCCTTA+AGG | 0.357132 | 1_3:-72266349 | Msa0139060:CDS |
AAGAAAGAAGAATAATGAAT+TGG | 0.367091 | 1_3:-72269375 | Msa0139060:CDS |
CTTGGAAGACATGAGCATTC+AGG | 0.367632 | 1_3:-72269672 | Msa0139060:CDS |
TCTTCAAGAGAAGTTTGAAT+TGG | 0.370237 | 1_3:-72269546 | Msa0139060:CDS |
ATGCTTTAGCAGTGGGTGTC+AGG | 0.376463 | 1_3:+72266442 | None:intergenic |
GTGCAGGCCCGAGGCCGATT+GGG | 0.381424 | 1_3:-72266508 | Msa0139060:CDS |
TGTGCAGGCCCGAGGCCGAT+TGG | 0.385248 | 1_3:-72266509 | Msa0139060:CDS |
GAGCATTCAGGAACTTGTTT+CGG | 0.395229 | 1_3:-72269660 | Msa0139060:CDS |
CCTCTATTACCTCTTTATGT+AGG | 0.400563 | 1_3:-72268244 | Msa0139060:CDS |
AAATTATCAATGGATTGTTT+GGG | 0.400666 | 1_3:-72266614 | Msa0139060:CDS |
TTGATAACTGCAATCCTTAA+GGG | 0.407477 | 1_3:-72266348 | Msa0139060:CDS |
GGGATCTAACATTGATCATC+AGG | 0.407482 | 1_3:-72266547 | Msa0139060:CDS |
CGGTGTCGCGTACAGCGTTT+CGG | 0.412285 | 1_3:-72269640 | Msa0139060:CDS |
TCTATCCATTTCACGGTGAC+TGG | 0.412297 | 1_3:+72266162 | None:intergenic |
TTCACGGTGACTGGTCTAGA+TGG | 0.418534 | 1_3:+72266171 | None:intergenic |
CTAGACCAGTCACCGTGAAA+TGG | 0.419439 | 1_3:-72266167 | Msa0139060:CDS |
ATCTTTCTTCCTAACCCAAT+CGG | 0.420963 | 1_3:+72266494 | None:intergenic |
ACAGTTTGATGAACTTGAAA+AGG | 0.422370 | 1_3:-72269612 | Msa0139060:CDS |
TCTCCTAGCAAATGACCTTC+GGG | 0.429048 | 1_3:-72266304 | Msa0139060:CDS |
AAGAAAACTAGTTTAGTTGA+AGG | 0.432212 | 1_3:-72269416 | Msa0139060:CDS |
AGGAGACGGCCGACATTGAC+TGG | 0.436580 | 1_3:+72266321 | None:intergenic |
CTTAAGGATTGCAGTTATCA+AGG | 0.437445 | 1_3:+72266350 | None:intergenic |
GGCCCGAGGCCGATTGGGTT+AGG | 0.439711 | 1_3:-72266503 | Msa0139060:CDS |
TTTCATGAGAAAATTATCAA+TGG | 0.445312 | 1_3:-72266624 | Msa0139060:CDS |
ATGATCAATGTTAGATCCCT+TGG | 0.447829 | 1_3:+72266551 | None:intergenic |
TTCCTAACCCAATCGGCCTC+GGG | 0.448443 | 1_3:+72266501 | None:intergenic |
CTGGGTCCTCCTAAAGAAGA+TGG | 0.457044 | 1_3:-72266705 | Msa0139060:CDS |
ACTTCGAATAGTGCTCTTGA+TGG | 0.457825 | 1_3:+72266892 | None:intergenic |
GAACTAAAAGAGCTAGGGTT+GGG | 0.458419 | 1_3:-72268289 | Msa0139060:CDS |
AGAGGGTTCACGTCCAAAAT+GGG | 0.465355 | 1_3:+72268262 | None:intergenic |
AGAATTTGTACCCTTCCAAC+TGG | 0.471268 | 1_3:+72266832 | None:intergenic |
GAAGAATAATGAATTGGAGT+TGG | 0.472786 | 1_3:-72269369 | Msa0139060:CDS |
CCTACATAAAGAGGTAATAG+AGG | 0.474454 | 1_3:+72268244 | None:intergenic |
TCTTGCCGCTCATCTACTAT+AGG | 0.475363 | 1_3:+72268200 | None:intergenic |
TTAGTTGAAGGAGACATTGT+TGG | 0.478274 | 1_3:-72269404 | Msa0139060:CDS |
GTGTTCATTTGAAGCAAGAA+AGG | 0.479787 | 1_3:-72266574 | Msa0139060:CDS |
CTCTATTACCTCTTTATGTA+GGG | 0.480394 | 1_3:-72268243 | Msa0139060:CDS |
CATAAACCCAAAATCGAACC+TGG | 0.482521 | 1_3:-72269719 | Msa0139060:CDS |
TTATCAAGGTTGCTTTCTGA+AGG | 0.485245 | 1_3:+72266364 | None:intergenic |
TTCAAGCTGAAGAAGATTTG+AGG | 0.489086 | 1_3:-72269508 | Msa0139060:CDS |
GATCAACAAGCTTTGTGAAA+GGG | 0.494192 | 1_3:-72266232 | Msa0139060:CDS |
TCTGACAACATTTGCAAAAG+AGG | 0.496897 | 1_3:-72266769 | Msa0139060:CDS |
TTCTTTGCAAATGCATATCT+GGG | 0.497315 | 1_3:-72266723 | Msa0139060:CDS |
CATCATACCTGCACGTCTGA+TGG | 0.501556 | 1_3:+72268119 | None:intergenic |
TAGTTCCCATCTTCTTTAGG+AGG | 0.502708 | 1_3:+72266699 | None:intergenic |
AACTATGCGAAAGAGGGAAA+AGG | 0.504170 | 1_3:-72269475 | Msa0139060:CDS |
GCTCAAGGTGAATCATCATC+TGG | 0.509285 | 1_3:-72269293 | Msa0139060:intron |
ACAAGCTTTGTGAAAGGGTG+AGG | 0.511043 | 1_3:-72266227 | Msa0139060:CDS |
GAGTAATTATGAAACATTGT+TGG | 0.513700 | 1_3:-72269447 | Msa0139060:CDS |
ATGATAGTGACCAGAGGATG+GGG | 0.517665 | 1_3:-72266795 | Msa0139060:CDS |
TGCACGCTCCCTACATAAAG+AGG | 0.520005 | 1_3:+72268235 | None:intergenic |
CGGCACGAACTAAAAGAGCT+AGG | 0.525867 | 1_3:-72268295 | Msa0139060:CDS |
CAATGATAGTGACCAGAGGA+TGG | 0.529533 | 1_3:-72266797 | Msa0139060:CDS |
GAGAGGAACTATGCGAAAGA+GGG | 0.529712 | 1_3:-72269481 | Msa0139060:CDS |
ATCAAGGTTGCTTTCTGAAG+GGG | 0.531107 | 1_3:+72266366 | None:intergenic |
AACTAAAAGAGCTAGGGTTG+GGG | 0.531167 | 1_3:-72268288 | Msa0139060:CDS |
AGAGAGGAACTATGCGAAAG+AGG | 0.532815 | 1_3:-72269482 | Msa0139060:CDS |
ATTTGAAGCAAGAAAGGCCA+AGG | 0.533782 | 1_3:-72266568 | Msa0139060:CDS |
TGAGAAAGTTGAAGCGAAAG+TGG | 0.545305 | 1_3:-72269334 | Msa0139060:CDS |
GCATGGTTTATGTAGCTTGT+GGG | 0.546630 | 1_3:+72266261 | None:intergenic |
AATGATAGTGACCAGAGGAT+GGG | 0.548642 | 1_3:-72266796 | Msa0139060:CDS |
ACTATGCGAAAGAGGGAAAA+GGG | 0.558476 | 1_3:-72269474 | Msa0139060:CDS |
AGATTCTTAGTACTCTGTGC+AGG | 0.562380 | 1_3:-72266524 | Msa0139060:CDS |
TGTCCCTCCATCAGACGTGC+AGG | 0.562640 | 1_3:-72268126 | Msa0139060:intron |
TAATTATGAAACATTGTTGG+AGG | 0.563738 | 1_3:-72269444 | Msa0139060:CDS |
TGATCAACAAGCTTTGTGAA+AGG | 0.564096 | 1_3:-72266233 | Msa0139060:CDS |
AACAGTTCGCTGTGGCCCGA+AGG | 0.565934 | 1_3:+72266289 | None:intergenic |
TATCAAGGTTGCTTTCTGAA+GGG | 0.569374 | 1_3:+72266365 | None:intergenic |
TAGTACTCTGTGCAGGCCCG+AGG | 0.571519 | 1_3:-72266517 | Msa0139060:CDS |
TGGCCCGAAGGTCATTTGCT+AGG | 0.575481 | 1_3:+72266301 | None:intergenic |
TTGAATTGGAGAGACTAATG+AGG | 0.577255 | 1_3:-72269532 | Msa0139060:CDS |
GATTGGGTTAGGAAGAAAGA+TGG | 0.578358 | 1_3:-72266492 | Msa0139060:CDS |
TGGGTCCTCCTAAAGAAGAT+GGG | 0.581164 | 1_3:-72266704 | Msa0139060:CDS |
CACATTTGAACACGGAAGCA+AGG | 0.582698 | 1_3:+72266398 | None:intergenic |
GACACCCACTGCTAAAGCAT+GGG | 0.585381 | 1_3:-72266439 | Msa0139060:CDS |
TGACACCCACTGCTAAAGCA+TGG | 0.585774 | 1_3:-72266440 | Msa0139060:CDS |
CATACCTGCACGTCTGATGG+AGG | 0.590917 | 1_3:+72268122 | None:intergenic |
CGAACTAAAAGAGCTAGGGT+TGG | 0.592003 | 1_3:-72268290 | Msa0139060:CDS |
TGGTCATTCGAAGACAACCC+AGG | 0.592494 | 1_3:+72269701 | None:intergenic |
AAAGTTGAAGCGAAAGTGGT+TGG | 0.594562 | 1_3:-72269330 | Msa0139060:CDS |
GAAGGTCATTTGCTAGGAGA+CGG | 0.595497 | 1_3:+72266307 | None:intergenic |
CTACATAAAGAGGTAATAGA+GGG | 0.601936 | 1_3:+72268245 | None:intergenic |
GGAACTAGATGAGACGTTGG+TGG | 0.604691 | 1_3:+72266944 | None:intergenic |
AGAAGATTTGAGGAAAAGAG+AGG | 0.614227 | 1_3:-72269498 | Msa0139060:CDS |
GGCACGAACTAAAAGAGCTA+GGG | 0.614763 | 1_3:-72268294 | Msa0139060:CDS |
GCTTGTTGATCAATGATGCA+TGG | 0.616686 | 1_3:+72266244 | None:intergenic |
TGCATGGTTTATGTAGCTTG+TGG | 0.616762 | 1_3:+72266260 | None:intergenic |
GGTGTACCCTGAAAAGAATG+AGG | 0.620543 | 1_3:-72266205 | Msa0139060:CDS |
TGACAACGTTCATATCTCAC+AGG | 0.621939 | 1_3:-72268174 | Msa0139060:CDS |
GTTGCCCATGCTTTAGCAGT+GGG | 0.624509 | 1_3:+72266435 | None:intergenic |
CAAGCTTTGTGAAAGGGTGA+GGG | 0.624867 | 1_3:-72266226 | Msa0139060:CDS |
ATACCTGCACGTCTGATGGA+GGG | 0.632758 | 1_3:+72268123 | None:intergenic |
GATGATAGCAATGCTGCTCA+AGG | 0.637953 | 1_3:-72269308 | Msa0139060:CDS |
TGTTGCCCATGCTTTAGCAG+TGG | 0.654029 | 1_3:+72266434 | None:intergenic |
TTTGAAGCAAGAAAGGCCAA+GGG | 0.664841 | 1_3:-72266567 | Msa0139060:CDS |
AAGGGCGAACCAGTCAATGT+CGG | 0.669594 | 1_3:-72266330 | Msa0139060:CDS |
ATAAACCCAAAATCGAACCT+GGG | 0.669846 | 1_3:-72269718 | Msa0139060:CDS |
AAAGGAACTAGATGAGACGT+TGG | 0.686332 | 1_3:+72266941 | None:intergenic |
TGATAGTGACCAGAGGATGG+GGG | 0.689252 | 1_3:-72266794 | Msa0139060:CDS |
AAGTCTGACACATTTGAACA+CGG | 0.704591 | 1_3:+72266390 | None:intergenic |
CAACGTTCATATCTCACAGG+AGG | 0.705255 | 1_3:-72268171 | Msa0139060:CDS |
CAGGCAATGATAGTGACCAG+AGG | 0.712647 | 1_3:-72266801 | Msa0139060:CDS |
ATGCACCTATAGTAGATGAG+CGG | 0.720441 | 1_3:-72268205 | Msa0139060:CDS |
GGGAGAAGAACAGTTCGCTG+TGG | 0.729789 | 1_3:+72266281 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATATATTTCTTATCA+GGG | - | chr1_3:72267546-72267565 | Msa0139060:intron | 10.0% |
!!! | TAAGTTATGTTTTAAAAAAT+GGG | - | chr1_3:72268640-72268659 | Msa0139060:intron | 10.0% |
!!! | AAATTATGATTTTGAGTAAT+GGG | + | chr1_3:72266952-72266971 | None:intergenic | 15.0% |
!!! | TATCTCTTTTAATATTTTCT+AGG | + | chr1_3:72267265-72267284 | None:intergenic | 15.0% |
!! | TATTCAAAATGTAATTCATT+AGG | + | chr1_3:72267464-72267483 | None:intergenic | 15.0% |
!!! | TAATGAATTACATTTTGAAT+AGG | - | chr1_3:72267463-72267482 | Msa0139060:intron | 15.0% |
!! | CAATTAATATATTTCTTATC+AGG | - | chr1_3:72267545-72267564 | Msa0139060:intron | 15.0% |
!!! | TTTTATTTGAGTTTTTGTTT+TGG | - | chr1_3:72268183-72268202 | Msa0139060:CDS | 15.0% |
!!! | TTTATTTGAGTTTTTGTTTT+GGG | - | chr1_3:72268184-72268203 | Msa0139060:CDS | 15.0% |
!!! | GTAAGTTATGTTTTAAAAAA+TGG | - | chr1_3:72268639-72268658 | Msa0139060:intron | 15.0% |
!! | AAGAAAGAAGAATAATGAAT+TGG | - | chr1_3:72266490-72266509 | Msa0139060:CDS | 20.0% |
!!! | TGCCATGAAAATATAATTTT+TGG | - | chr1_3:72266723-72266742 | Msa0139060:CDS | 20.0% |
!!! | GTCCAAAAATTATATTTTCA+TGG | + | chr1_3:72266728-72266747 | None:intergenic | 20.0% |
!! | CAACTTGATATATAAATTCA+TGG | + | chr1_3:72266778-72266797 | None:intergenic | 20.0% |
!!! | CAAATTATGATTTTGAGTAA+TGG | + | chr1_3:72266953-72266972 | None:intergenic | 20.0% |
!! | ACATAAATTCATTTAGCATT+AGG | - | chr1_3:72267156-72267175 | Msa0139060:intron | 20.0% |
!!! | ATGATTTATGATTTGTAGTT+GGG | + | chr1_3:72267226-72267245 | None:intergenic | 20.0% |
!! | AGATTCAAATCAAATACATA+AGG | - | chr1_3:72267321-72267340 | Msa0139060:intron | 20.0% |
!!! | TAAGGTCAGAAATTTTAAAT+GGG | + | chr1_3:72267428-72267447 | None:intergenic | 20.0% |
!!! | TTAAGGTCAGAAATTTTAAA+TGG | + | chr1_3:72267429-72267448 | None:intergenic | 20.0% |
!!! | TCAATTACATCTAGAATTAT+GGG | - | chr1_3:72267773-72267792 | Msa0139060:intron | 20.0% |
!! | TAAATTTCTTCAATTCACTA+GGG | + | chr1_3:72267816-72267835 | None:intergenic | 20.0% |
!!! | TGAGTTAATTACATTTTACA+GGG | + | chr1_3:72267849-72267868 | None:intergenic | 20.0% |
!!! | ATGAGTTAATTACATTTTAC+AGG | + | chr1_3:72267850-72267869 | None:intergenic | 20.0% |
!! | TAAGTTTATTCCAATTTCTA+TGG | - | chr1_3:72268413-72268432 | Msa0139060:intron | 20.0% |
!!! | TTTATTACCATTTTTCCTAA+TGG | - | chr1_3:72268437-72268456 | Msa0139060:intron | 20.0% |
!! | TTCAAAAAGAATAGTATATG+AGG | - | chr1_3:72268567-72268586 | Msa0139060:intron | 20.0% |
!! | TAAAACATAACTTACTAACT+TGG | + | chr1_3:72268634-72268653 | None:intergenic | 20.0% |
!!! | TTATGTTTTAAAAAATGGGT+AGG | - | chr1_3:72268644-72268663 | Msa0139060:intron | 20.0% |
!!! | TATGTTTTAAAAAATGGGTA+GGG | - | chr1_3:72268645-72268664 | Msa0139060:intron | 20.0% |
!! | TTAATCATTGTTGAATTTGT+TGG | - | chr1_3:72268685-72268704 | Msa0139060:intron | 20.0% |
!!! | TAATCATTGTTGAATTTGTT+GGG | - | chr1_3:72268686-72268705 | Msa0139060:intron | 20.0% |
!!! | TTGTAATTTTATTTGTGACT+AGG | - | chr1_3:72268766-72268785 | Msa0139060:intron | 20.0% |
!!! | TTTTTATCTTTGCTTTGTTT+TGG | + | chr1_3:72268895-72268914 | None:intergenic | 20.0% |
!! | AAACAAAGCAAAGATAAAAA+AGG | - | chr1_3:72268895-72268914 | Msa0139060:intron | 20.0% |
!!! | TTGATAATTTTCTCATGAAA+TGG | + | chr1_3:72269241-72269260 | None:intergenic | 20.0% |
!! | TTTCATGAGAAAATTATCAA+TGG | - | chr1_3:72269241-72269260 | Msa0139060:intron | 20.0% |
!!! | AAAATTATCAATGGATTGTT+TGG | - | chr1_3:72269250-72269269 | Msa0139060:intron | 20.0% |
!!! | AAATTATCAATGGATTGTTT+GGG | - | chr1_3:72269251-72269270 | Msa0139060:intron | 20.0% |
! | GAGTAATTATGAAACATTGT+TGG | - | chr1_3:72266418-72266437 | Msa0139060:CDS | 25.0% |
! | TAATTATGAAACATTGTTGG+AGG | - | chr1_3:72266421-72266440 | Msa0139060:CDS | 25.0% |
!! | AAGAAAACTAGTTTAGTTGA+AGG | - | chr1_3:72266449-72266468 | Msa0139060:CDS | 25.0% |
! | GGAAAAAATGCATAATATAC+AGG | + | chr1_3:72266629-72266648 | None:intergenic | 25.0% |
! | CAATATTTATAAAGCAGCAT+TGG | + | chr1_3:72266650-72266669 | None:intergenic | 25.0% |
! | AATTCAATACAAGTGATGAT+CGG | - | chr1_3:72266670-72266689 | Msa0139060:CDS | 25.0% |
!!! | ATATAATTTTTGGACCAATG+AGG | - | chr1_3:72266733-72266752 | Msa0139060:CDS | 25.0% |
!!! | TATAATTTTTGGACCAATGA+GGG | - | chr1_3:72266734-72266753 | Msa0139060:CDS | 25.0% |
! | ATGAATGTATAATGTGTTGT+TGG | - | chr1_3:72266804-72266823 | Msa0139060:CDS | 25.0% |
! | TAGTTAGTCAATTGTTAGAA+GGG | + | chr1_3:72267106-72267125 | None:intergenic | 25.0% |
!!! | TGTTCTTTGTTTTGTTTGAT+AGG | + | chr1_3:72267139-72267158 | None:intergenic | 25.0% |
! | CATTTAGCATTAGGTTATTA+TGG | - | chr1_3:72267165-72267184 | Msa0139060:intron | 25.0% |
!! | TGATTTATGATTTGTAGTTG+GGG | + | chr1_3:72267225-72267244 | None:intergenic | 25.0% |
!! | GATGATTTATGATTTGTAGT+TGG | + | chr1_3:72267227-72267246 | None:intergenic | 25.0% |
!! | TTGATTTGAATCTCTTCTAT+AGG | + | chr1_3:72267314-72267333 | None:intergenic | 25.0% |
! | AATATATTTCTTATCAGGGA+CGG | - | chr1_3:72267550-72267569 | Msa0139060:intron | 25.0% |
!! | CTCAATTACATCTAGAATTA+TGG | - | chr1_3:72267772-72267791 | Msa0139060:intron | 25.0% |
! | CTAAATTTCTTCAATTCACT+AGG | + | chr1_3:72267817-72267836 | None:intergenic | 25.0% |
! | GAATTGAAGAAATTTAGATG+TGG | - | chr1_3:72267820-72267839 | Msa0139060:intron | 25.0% |
! | TAAAAAAGAGGAAAAGAGAA+TGG | + | chr1_3:72268376-72268395 | None:intergenic | 25.0% |
! | AGAGAAATCTGATAAAAAAG+AGG | + | chr1_3:72268388-72268407 | None:intergenic | 25.0% |
! | GGTAATAAATCCATAGAAAT+TGG | + | chr1_3:72268426-72268445 | None:intergenic | 25.0% |
! | TATGAAGTGAAAAATGTCAA+AGG | + | chr1_3:72268945-72268964 | None:intergenic | 25.0% |
!! | CATTTTTCACTTCATATCAT+TGG | - | chr1_3:72268949-72268968 | Msa0139060:intron | 25.0% |
!! | TTCTAACACAAACTTTTTGT+TGG | + | chr1_3:72269005-72269024 | None:intergenic | 25.0% |
!!! | TCAGAAGAGTTAAGTTTTAT+TGG | + | chr1_3:72269403-72269422 | None:intergenic | 25.0% |
!!! | TGTTTTTTCTATCCATTTCA+CGG | + | chr1_3:72269713-72269732 | None:intergenic | 25.0% |
TTCGAATGACCATAAAAACT+TGG | - | chr1_3:72266175-72266194 | Msa0139060:CDS | 30.0% | |
! | TCATGTCTTCCAAGTTTTTA+TGG | + | chr1_3:72266187-72266206 | None:intergenic | 30.0% |
ACAGTTTGATGAACTTGAAA+AGG | - | chr1_3:72266253-72266272 | Msa0139060:CDS | 30.0% | |
TCTTCAAGAGAAGTTTGAAT+TGG | - | chr1_3:72266319-72266338 | Msa0139060:CDS | 30.0% | |
GAAGAATAATGAATTGGAGT+TGG | - | chr1_3:72266496-72266515 | Msa0139060:CDS | 30.0% | |
ACAGGTAGAATTTGAAAGAA+AGG | + | chr1_3:72266838-72266857 | None:intergenic | 30.0% | |
! | TTGAGTAATGGGACTTAAAT+GGG | + | chr1_3:72266941-72266960 | None:intergenic | 30.0% |
! | TTTGAGTAATGGGACTTAAA+TGG | + | chr1_3:72266942-72266961 | None:intergenic | 30.0% |
GTAGTTAGTCAATTGTTAGA+AGG | + | chr1_3:72267107-72267126 | None:intergenic | 30.0% | |
GGGGATTTAATTCAGATTAA+AGG | + | chr1_3:72267206-72267225 | None:intergenic | 30.0% | |
TTAGGTAAGAACAAGCATTA+AGG | + | chr1_3:72267446-72267465 | None:intergenic | 30.0% | |
CTACATAAAGAGGTAATAGA+GGG | + | chr1_3:72267623-72267642 | None:intergenic | 30.0% | |
CTCTATTACCTCTTTATGTA+GGG | - | chr1_3:72267622-72267641 | Msa0139060:intron | 30.0% | |
AGAATGAACTTCAAAAACTG+AGG | + | chr1_3:72268252-72268271 | None:intergenic | 30.0% | |
TCTCAAACCATTAGGAAAAA+TGG | + | chr1_3:72268447-72268466 | None:intergenic | 30.0% | |
!! | TTTGGATGAGATTTTGATGT+TGG | - | chr1_3:72268509-72268528 | Msa0139060:intron | 30.0% |
ATAACTTACTAACTTGGTTG+TGG | + | chr1_3:72268628-72268647 | None:intergenic | 30.0% | |
ATAGCATCAAAGTTAGAACA+AGG | + | chr1_3:72268830-72268849 | None:intergenic | 30.0% | |
!!! | TTGTTCTTGACTGTTTTTGT+AGG | - | chr1_3:72268856-72268875 | Msa0139060:intron | 30.0% |
!!! | ACTGTTTTTGTAGGAACAAA+TGG | - | chr1_3:72268865-72268884 | Msa0139060:intron | 30.0% |
GTTAGAAAAAAATCTCCAGT+TGG | - | chr1_3:72269018-72269037 | Msa0139060:intron | 30.0% | |
AAAAAAATCTCCAGTTGGAA+GGG | - | chr1_3:72269023-72269042 | Msa0139060:intron | 30.0% | |
GTACAAATTCTCAGATATTC+AGG | - | chr1_3:72269045-72269064 | Msa0139060:intron | 30.0% | |
TTCTTTGCAAATGCATATCT+GGG | - | chr1_3:72269142-72269161 | Msa0139060:intron | 30.0% | |
TTATAGTTCCCATCTTCTTT+AGG | + | chr1_3:72269172-72269191 | None:intergenic | 30.0% | |
!!! | AAATTCACTAGTTTTGTGAG+AGG | - | chr1_3:72269205-72269224 | Msa0139060:intron | 30.0% |
!!! | AATTCACTAGTTTTGTGAGA+GGG | - | chr1_3:72269206-72269225 | Msa0139060:intron | 30.0% |
! | TTGATAACTGCAATCCTTAA+GGG | - | chr1_3:72269517-72269536 | Msa0139060:CDS | 30.0% |
! | CAATTTCCTCATTCTTTTCA+GGG | + | chr1_3:72269669-72269688 | None:intergenic | 30.0% |
! | ACAATTTCCTCATTCTTTTC+AGG | + | chr1_3:72269670-72269689 | None:intergenic | 30.0% |
ATAAACCCAAAATCGAACCT+GGG | - | chr1_3:72266147-72266166 | Msa0139060:CDS | 35.0% | |
TTGAATTGGAGAGACTAATG+AGG | - | chr1_3:72266333-72266352 | Msa0139060:CDS | 35.0% | |
TTCAAGCTGAAGAAGATTTG+AGG | - | chr1_3:72266357-72266376 | Msa0139060:CDS | 35.0% | |
AGAAGATTTGAGGAAAAGAG+AGG | - | chr1_3:72266367-72266386 | Msa0139060:CDS | 35.0% | |
TTAGTTGAAGGAGACATTGT+TGG | - | chr1_3:72266461-72266480 | Msa0139060:CDS | 35.0% | |
CTAAGAACAAATACCCTCAT+TGG | + | chr1_3:72266750-72266769 | None:intergenic | 35.0% | |
TACACACAAATATTCACACG+CGG | + | chr1_3:72266871-72266890 | None:intergenic | 35.0% | |
TGTGTGTAATTATGTCCCTT+TGG | - | chr1_3:72266883-72266902 | Msa0139060:CDS | 35.0% | |
ACGTTGAAGGAGATTTAAGA+AGG | - | chr1_3:72267045-72267064 | Msa0139060:intron | 35.0% | |
TTGAAGGAGATTTAAGAAGG+AGG | - | chr1_3:72267048-72267067 | Msa0139060:intron | 35.0% | |
GATTAAAGGCTATCTTGTCT+AGG | + | chr1_3:72267192-72267211 | None:intergenic | 35.0% | |
!! | TTTTCATGAGTGTTGTGGAT+GGG | + | chr1_3:72267363-72267382 | None:intergenic | 35.0% |
!! | ATTTTCATGAGTGTTGTGGA+TGG | + | chr1_3:72267364-72267383 | None:intergenic | 35.0% |
!! | ATGGATTTTCATGAGTGTTG+TGG | + | chr1_3:72267368-72267387 | None:intergenic | 35.0% |
CCTACATAAAGAGGTAATAG+AGG | + | chr1_3:72267624-72267643 | None:intergenic | 35.0% | |
CCTCTATTACCTCTTTATGT+AGG | - | chr1_3:72267621-72267640 | Msa0139060:intron | 35.0% | |
AATTGCAAGTCATACTGAAC+TGG | - | chr1_3:72267986-72268005 | Msa0139060:intron | 35.0% | |
ATTGCAAGTCATACTGAACT+GGG | - | chr1_3:72267987-72268006 | Msa0139060:intron | 35.0% | |
CAAAATCTCATCCAAACTGT+GGG | + | chr1_3:72268505-72268524 | None:intergenic | 35.0% | |
TCAAAATCTCATCCAAACTG+TGG | + | chr1_3:72268506-72268525 | None:intergenic | 35.0% | |
! | ATGTTGGTTGTCGTGATTAT+GGG | - | chr1_3:72268525-72268544 | Msa0139060:intron | 35.0% |
GTTATGCATCCAACTATTTC+AGG | - | chr1_3:72268597-72268616 | Msa0139060:intron | 35.0% | |
GAAAAAAATCTCCAGTTGGA+AGG | - | chr1_3:72269022-72269041 | Msa0139060:intron | 35.0% | |
TCTGACAACATTTGCAAAAG+AGG | - | chr1_3:72269096-72269115 | Msa0139060:intron | 35.0% | |
GTTCTTTGCAAATGCATATC+TGG | - | chr1_3:72269141-72269160 | Msa0139060:intron | 35.0% | |
! | GTGTTCATTTGAAGCAAGAA+AGG | - | chr1_3:72269291-72269310 | Msa0139060:intron | 35.0% |
ATGATCAATGTTAGATCCCT+TGG | + | chr1_3:72269317-72269336 | None:intergenic | 35.0% | |
ATCTTTCTTCCTAACCCAAT+CGG | + | chr1_3:72269374-72269393 | None:intergenic | 35.0% | |
AAGTCTGACACATTTGAACA+CGG | + | chr1_3:72269478-72269497 | None:intergenic | 35.0% | |
! | TATCAAGGTTGCTTTCTGAA+GGG | + | chr1_3:72269503-72269522 | None:intergenic | 35.0% |
! | TTATCAAGGTTGCTTTCTGA+AGG | + | chr1_3:72269504-72269523 | None:intergenic | 35.0% |
CTTAAGGATTGCAGTTATCA+AGG | + | chr1_3:72269518-72269537 | None:intergenic | 35.0% | |
! | CTTGATAACTGCAATCCTTA+AGG | - | chr1_3:72269516-72269535 | Msa0139060:CDS | 35.0% |
! | TGATCAACAAGCTTTGTGAA+AGG | - | chr1_3:72269632-72269651 | Msa0139060:CDS | 35.0% |
! | GATCAACAAGCTTTGTGAAA+GGG | - | chr1_3:72269633-72269652 | Msa0139060:CDS | 35.0% |
CATAAACCCAAAATCGAACC+TGG | - | chr1_3:72266146-72266165 | Msa0139060:CDS | 40.0% | |
! | GAGCATTCAGGAACTTGTTT+CGG | - | chr1_3:72266205-72266224 | Msa0139060:CDS | 40.0% |
AACTATGCGAAAGAGGGAAA+AGG | - | chr1_3:72266390-72266409 | Msa0139060:CDS | 40.0% | |
ACTATGCGAAAGAGGGAAAA+GGG | - | chr1_3:72266391-72266410 | Msa0139060:CDS | 40.0% | |
TGAGAAAGTTGAAGCGAAAG+TGG | - | chr1_3:72266531-72266550 | Msa0139060:CDS | 40.0% | |
AAAGTTGAAGCGAAAGTGGT+TGG | - | chr1_3:72266535-72266554 | Msa0139060:CDS | 40.0% | |
! | ATCGAACAAGTTGGACCAAA+GGG | + | chr1_3:72266901-72266920 | None:intergenic | 40.0% |
! | AATCGAACAAGTTGGACCAA+AGG | + | chr1_3:72266902-72266921 | None:intergenic | 40.0% |
! | TTTGGTCCAACTTGTTCGAT+TGG | - | chr1_3:72266901-72266920 | Msa0139060:CDS | 40.0% |
AATGGGACTTAAATGGGAAC+AGG | + | chr1_3:72266935-72266954 | None:intergenic | 40.0% | |
TAGTTTCCGGGAATCAAATC+CGG | + | chr1_3:72267076-72267095 | None:intergenic | 40.0% | |
! | AAGGGAGAATGTTAGTTTCC+GGG | + | chr1_3:72267088-72267107 | None:intergenic | 40.0% |
! | GAAGGGAGAATGTTAGTTTC+CGG | + | chr1_3:72267089-72267108 | None:intergenic | 40.0% |
!! | TTCTAGGACTCATCACTCTT+AGG | + | chr1_3:72267249-72267268 | None:intergenic | 40.0% |
ACTTCTAGACTGCATAAGCA+TGG | + | chr1_3:72267387-72267406 | None:intergenic | 40.0% | |
GAACTAAAAGAGCTAGGGTT+GGG | - | chr1_3:72267576-72267595 | Msa0139060:intron | 40.0% | |
AACTAAAAGAGCTAGGGTTG+GGG | - | chr1_3:72267577-72267596 | Msa0139060:intron | 40.0% | |
ATGCACCTATAGTAGATGAG+CGG | - | chr1_3:72267660-72267679 | Msa0139060:intron | 40.0% | |
TGACAACGTTCATATCTCAC+AGG | - | chr1_3:72267691-72267710 | Msa0139060:intron | 40.0% | |
TTGCAAGTCATACTGAACTG+GGG | - | chr1_3:72267988-72268007 | Msa0139060:intron | 40.0% | |
!! | TTACTTGTTCCGTACTGACT+TGG | - | chr1_3:72268080-72268099 | Msa0139060:intron | 40.0% |
!! | TGCAGTATAGTTGGTGATTG+AGG | - | chr1_3:72268155-72268174 | Msa0139060:CDS | 40.0% |
!! | AGTATAGTTGGTGATTGAGG+TGG | - | chr1_3:72268158-72268177 | Msa0139060:CDS | 40.0% |
!!! | TGAGTTTTTGTTTTGGGCGT+TGG | - | chr1_3:72268190-72268209 | Msa0139060:CDS | 40.0% |
CTTTCAGCTCTCAAACCATT+AGG | + | chr1_3:72268455-72268474 | None:intergenic | 40.0% | |
TTTCTTTCCTTCCCACAGTT+TGG | - | chr1_3:72268491-72268510 | Msa0139060:intron | 40.0% | |
! | GATGTTGGTTGTCGTGATTA+TGG | - | chr1_3:72268524-72268543 | Msa0139060:intron | 40.0% |
GCATCCAACTATTTCAGGAA+AGG | - | chr1_3:72268602-72268621 | Msa0139060:intron | 40.0% | |
GATGCACGAGTATGATGAAA+TGG | - | chr1_3:72268742-72268761 | Msa0139060:intron | 40.0% | |
ACTAGGCATGCTTGTGTTAA+GGG | - | chr1_3:72268783-72268802 | Msa0139060:intron | 40.0% | |
AAAGGAACTAGATGAGACGT+TGG | + | chr1_3:72268927-72268946 | None:intergenic | 40.0% | |
ACTTCGAATAGTGCTCTTGA+TGG | + | chr1_3:72268976-72268995 | None:intergenic | 40.0% | |
! | AGAGCACTATTCGAAGTTTC+TGG | - | chr1_3:72268979-72268998 | Msa0139060:intron | 40.0% |
AGAATTTGTACCCTTCCAAC+TGG | + | chr1_3:72269036-72269055 | None:intergenic | 40.0% | |
! | AATGATAGTGACCAGAGGAT+GGG | - | chr1_3:72269069-72269088 | Msa0139060:intron | 40.0% |
TAGTTCCCATCTTCTTTAGG+AGG | + | chr1_3:72269169-72269188 | None:intergenic | 40.0% | |
!!! | TAGTTTTGTGAGAGGGAAGA+AGG | - | chr1_3:72269213-72269232 | Msa0139060:intron | 40.0% |
! | ATTTGAAGCAAGAAAGGCCA+AGG | - | chr1_3:72269297-72269316 | Msa0139060:CDS | 40.0% |
! | TTTGAAGCAAGAAAGGCCAA+GGG | - | chr1_3:72269298-72269317 | Msa0139060:CDS | 40.0% |
GGGATCTAACATTGATCATC+AGG | - | chr1_3:72269318-72269337 | Msa0139060:CDS | 40.0% | |
AGATTCTTAGTACTCTGTGC+AGG | - | chr1_3:72269341-72269360 | Msa0139060:CDS | 40.0% | |
! | GATTGGGTTAGGAAGAAAGA+TGG | - | chr1_3:72269373-72269392 | Msa0139060:CDS | 40.0% |
! | ATCAAGGTTGCTTTCTGAAG+GGG | + | chr1_3:72269502-72269521 | None:intergenic | 40.0% |
! | GCATGGTTTATGTAGCTTGT+GGG | + | chr1_3:72269607-72269626 | None:intergenic | 40.0% |
TGCATGGTTTATGTAGCTTG+TGG | + | chr1_3:72269608-72269627 | None:intergenic | 40.0% | |
! | GCTTGTTGATCAATGATGCA+TGG | + | chr1_3:72269624-72269643 | None:intergenic | 40.0% |
! | GACAACCCAGGTTCGATTTT+GGG | + | chr1_3:72266155-72266174 | None:intergenic | 45.0% |
! | AGACAACCCAGGTTCGATTT+TGG | + | chr1_3:72266156-72266175 | None:intergenic | 45.0% |
CTTGGAAGACATGAGCATTC+AGG | - | chr1_3:72266193-72266212 | Msa0139060:CDS | 45.0% | |
AGAGAGGAACTATGCGAAAG+AGG | - | chr1_3:72266383-72266402 | Msa0139060:CDS | 45.0% | |
GAGAGGAACTATGCGAAAGA+GGG | - | chr1_3:72266384-72266403 | Msa0139060:CDS | 45.0% | |
GATGATAGCAATGCTGCTCA+AGG | - | chr1_3:72266557-72266576 | Msa0139060:CDS | 45.0% | |
GCTCAAGGTGAATCATCATC+TGG | - | chr1_3:72266572-72266591 | Msa0139060:CDS | 45.0% | |
CAATCGCCAATCGAACAAGT+TGG | + | chr1_3:72266910-72266929 | None:intergenic | 45.0% | |
! | CAACTTGTTCGATTGGCGAT+TGG | - | chr1_3:72266908-72266927 | Msa0139060:CDS | 45.0% |
AGATAAACACTTCCCCGCAT+AGG | - | chr1_3:72266999-72267018 | Msa0139060:intron | 45.0% | |
TAGCTCGGTTGTTGAGCTAA+AGG | - | chr1_3:72267022-72267041 | Msa0139060:intron | 45.0% | |
GTTGAGCTAAAGGACGTTGA+AGG | - | chr1_3:72267032-72267051 | Msa0139060:intron | 45.0% | |
GAGATTTAAGAAGGAGGTCC+CGG | - | chr1_3:72267054-72267073 | Msa0139060:intron | 45.0% | |
AGTTTCCGGGAATCAAATCC+GGG | + | chr1_3:72267075-72267094 | None:intergenic | 45.0% | |
GGCACGAACTAAAAGAGCTA+GGG | - | chr1_3:72267571-72267590 | Msa0139060:intron | 45.0% | |
CGAACTAAAAGAGCTAGGGT+TGG | - | chr1_3:72267575-72267594 | Msa0139060:intron | 45.0% | |
AGAGGGTTCACGTCCAAAAT+GGG | + | chr1_3:72267606-72267625 | None:intergenic | 45.0% | |
TAGAGGGTTCACGTCCAAAA+TGG | + | chr1_3:72267607-72267626 | None:intergenic | 45.0% | |
TCTTGCCGCTCATCTACTAT+AGG | + | chr1_3:72267668-72267687 | None:intergenic | 45.0% | |
CAACGTTCATATCTCACAGG+AGG | - | chr1_3:72267694-72267713 | Msa0139060:intron | 45.0% | |
!! | AGAATGAGGCCAAAAGCGTT+TGG | + | chr1_3:72268041-72268060 | None:intergenic | 45.0% |
! | AAACGCTTTTGGCCTCATTC+TGG | - | chr1_3:72268040-72268059 | Msa0139060:intron | 45.0% |
CAGTTAAGCACTCCAGAATG+AGG | + | chr1_3:72268055-72268074 | None:intergenic | 45.0% | |
AGGCTTTGCATAAGAGAGGT+AGG | + | chr1_3:72268297-72268316 | None:intergenic | 45.0% | |
GAGAAGGCTTTGCATAAGAG+AGG | + | chr1_3:72268301-72268320 | None:intergenic | 45.0% | |
GAGAATGGTTGTGCGACATT+GGG | + | chr1_3:72268361-72268380 | None:intergenic | 45.0% | |
AGAGAATGGTTGTGCGACAT+TGG | + | chr1_3:72268362-72268381 | None:intergenic | 45.0% | |
ATCTCATCCAAACTGTGGGA+AGG | + | chr1_3:72268501-72268520 | None:intergenic | 45.0% | |
GTTGTCGTGATTATGGGTAC+TGG | - | chr1_3:72268531-72268550 | Msa0139060:intron | 45.0% | |
GTGGCCTTTCCTGAAATAGT+TGG | + | chr1_3:72268609-72268628 | None:intergenic | 45.0% | |
GACTAGGCATGCTTGTGTTA+AGG | - | chr1_3:72268782-72268801 | Msa0139060:intron | 45.0% | |
CTAGGCATGCTTGTGTTAAG+GGG | - | chr1_3:72268784-72268803 | Msa0139060:intron | 45.0% | |
GGGGATGGTTACTTGTTCAT+AGG | - | chr1_3:72268803-72268822 | Msa0139060:intron | 45.0% | |
! | CAATGATAGTGACCAGAGGA+TGG | - | chr1_3:72269068-72269087 | Msa0139060:intron | 45.0% |
! | ATGATAGTGACCAGAGGATG+GGG | - | chr1_3:72269070-72269089 | Msa0139060:intron | 45.0% |
TGGGTCCTCCTAAAGAAGAT+GGG | - | chr1_3:72269161-72269180 | Msa0139060:intron | 45.0% | |
CACATTTGAACACGGAAGCA+AGG | + | chr1_3:72269470-72269489 | None:intergenic | 45.0% | |
! | GAAGGTCATTTGCTAGGAGA+CGG | + | chr1_3:72269561-72269580 | None:intergenic | 45.0% |
GTCTCCTAGCAAATGACCTT+CGG | - | chr1_3:72269560-72269579 | Msa0139060:CDS | 45.0% | |
TCTCCTAGCAAATGACCTTC+GGG | - | chr1_3:72269561-72269580 | Msa0139060:CDS | 45.0% | |
! | ACAAGCTTTGTGAAAGGGTG+AGG | - | chr1_3:72269638-72269657 | Msa0139060:CDS | 45.0% |
! | CAAGCTTTGTGAAAGGGTGA+GGG | - | chr1_3:72269639-72269658 | Msa0139060:CDS | 45.0% |
GGTGTACCCTGAAAAGAATG+AGG | - | chr1_3:72269660-72269679 | Msa0139060:CDS | 45.0% | |
TCTATCCATTTCACGGTGAC+TGG | + | chr1_3:72269706-72269725 | None:intergenic | 45.0% | |
TGGTCATTCGAAGACAACCC+AGG | + | chr1_3:72266167-72266186 | None:intergenic | 50.0% | |
ACACGCGGTATACACACTAC+AGG | + | chr1_3:72266856-72266875 | None:intergenic | 50.0% | |
AACAACCGAGCTACCTATGC+GGG | + | chr1_3:72267015-72267034 | None:intergenic | 50.0% | |
CAACAACCGAGCTACCTATG+CGG | + | chr1_3:72267016-72267035 | None:intergenic | 50.0% | |
CGGCACGAACTAAAAGAGCT+AGG | - | chr1_3:72267570-72267589 | Msa0139060:intron | 50.0% | |
TGCACGCTCCCTACATAAAG+AGG | + | chr1_3:72267633-72267652 | None:intergenic | 50.0% | |
ATACCTGCACGTCTGATGGA+GGG | + | chr1_3:72267745-72267764 | None:intergenic | 50.0% | |
CATCATACCTGCACGTCTGA+TGG | + | chr1_3:72267749-72267768 | None:intergenic | 50.0% | |
!! | TGCAAAGAGGCACTCCAATG+CGG | + | chr1_3:72268106-72268125 | None:intergenic | 50.0% |
TGTGCGCTAAGCATGCAAAG+AGG | + | chr1_3:72268119-72268138 | None:intergenic | 50.0% | |
! | ATCTTTGCCTGGGTTGAGGA+GGG | + | chr1_3:72268323-72268342 | None:intergenic | 50.0% |
! | AATCTTTGCCTGGGTTGAGG+AGG | + | chr1_3:72268324-72268343 | None:intergenic | 50.0% |
CAGAATCTTTGCCTGGGTTG+AGG | + | chr1_3:72268327-72268346 | None:intergenic | 50.0% | |
GGTGGTCAGAATCTTTGCCT+GGG | + | chr1_3:72268333-72268352 | None:intergenic | 50.0% | |
AGGTGGTCAGAATCTTTGCC+TGG | + | chr1_3:72268334-72268353 | None:intergenic | 50.0% | |
GCATGCTTGTGTTAAGGGGA+TGG | - | chr1_3:72268788-72268807 | Msa0139060:intron | 50.0% | |
GGAACTAGATGAGACGTTGG+TGG | + | chr1_3:72268924-72268943 | None:intergenic | 50.0% | |
! | CAGGCAATGATAGTGACCAG+AGG | - | chr1_3:72269064-72269083 | Msa0139060:intron | 50.0% |
! | TGATAGTGACCAGAGGATGG+GGG | - | chr1_3:72269071-72269090 | Msa0139060:intron | 50.0% |
CTGGGTCCTCCTAAAGAAGA+TGG | - | chr1_3:72269160-72269179 | Msa0139060:intron | 50.0% | |
ATGCTTTAGCAGTGGGTGTC+AGG | + | chr1_3:72269426-72269445 | None:intergenic | 50.0% | |
TGACACCCACTGCTAAAGCA+TGG | - | chr1_3:72269425-72269444 | Msa0139060:CDS | 50.0% | |
GACACCCACTGCTAAAGCAT+GGG | - | chr1_3:72269426-72269445 | Msa0139060:CDS | 50.0% | |
GTTGCCCATGCTTTAGCAGT+GGG | + | chr1_3:72269433-72269452 | None:intergenic | 50.0% | |
TGTTGCCCATGCTTTAGCAG+TGG | + | chr1_3:72269434-72269453 | None:intergenic | 50.0% | |
!! | CATTGACTGGTTCGCCCTTA+AGG | + | chr1_3:72269534-72269553 | None:intergenic | 50.0% |
AAGGGCGAACCAGTCAATGT+CGG | - | chr1_3:72269535-72269554 | Msa0139060:CDS | 50.0% | |
!! | TTCACGGTGACTGGTCTAGA+TGG | + | chr1_3:72269697-72269716 | None:intergenic | 50.0% |
CTAGACCAGTCACCGTGAAA+TGG | - | chr1_3:72269698-72269717 | Msa0139060:CDS | 50.0% | |
ACTTCCCCGCATAGGTAGCT+CGG | - | chr1_3:72267007-72267026 | Msa0139060:intron | 55.0% | |
ACAACCGAGCTACCTATGCG+GGG | + | chr1_3:72267014-72267033 | None:intergenic | 55.0% | |
GAGGTCCCGGATTTGATTCC+CGG | - | chr1_3:72267067-72267086 | Msa0139060:intron | 55.0% | |
! | AGGGTTGGGGTTGCCCATTT+TGG | - | chr1_3:72267590-72267609 | Msa0139060:intron | 55.0% |
CATACCTGCACGTCTGATGG+AGG | + | chr1_3:72267746-72267765 | None:intergenic | 55.0% | |
! | GGGCACGTTCCAAACGCTTT+TGG | - | chr1_3:72268029-72268048 | Msa0139060:intron | 55.0% |
CCAATGCGGCCAAGTCAGTA+CGG | + | chr1_3:72268092-72268111 | None:intergenic | 55.0% | |
TGCATGCTTAGCGCACATGC+TGG | - | chr1_3:72268122-72268141 | Msa0139060:intron | 55.0% | |
CGCGCTGAGTGCAGTATAGT+TGG | - | chr1_3:72268146-72268165 | Msa0139060:CDS | 55.0% | |
GTTGTGCGACATTGGGCATG+AGG | + | chr1_3:72268354-72268373 | None:intergenic | 55.0% | |
TTCCTAACCCAATCGGCCTC+GGG | + | chr1_3:72269367-72269386 | None:intergenic | 55.0% | |
CTTCCTAACCCAATCGGCCT+CGG | + | chr1_3:72269368-72269387 | None:intergenic | 55.0% | |
TGGCCCGAAGGTCATTTGCT+AGG | + | chr1_3:72269567-72269586 | None:intergenic | 55.0% | |
GGGAGAAGAACAGTTCGCTG+TGG | + | chr1_3:72269587-72269606 | None:intergenic | 55.0% | |
!! | CGGTGTCGCGTACAGCGTTT+CGG | - | chr1_3:72266225-72266244 | Msa0139060:CDS | 60.0% |
TGTCCCTCCATCAGACGTGC+AGG | - | chr1_3:72267739-72267758 | Msa0139060:intron | 60.0% | |
GGCTTCCACCTGTGCGCTTA+GGG | - | chr1_3:72268009-72268028 | Msa0139060:intron | 60.0% | |
!! | CCGTACTGACTTGGCCGCAT+TGG | - | chr1_3:72268089-72268108 | Msa0139060:intron | 60.0% |
!!! | TGTTTTGGGCGTTGGAGCGC+AGG | - | chr1_3:72268198-72268217 | Msa0139060:CDS | 60.0% |
GTGCGACATTGGGCATGAGG+TGG | + | chr1_3:72268351-72268370 | None:intergenic | 60.0% | |
TGTCAGATGCCCCCATCCTC+TGG | + | chr1_3:72269083-72269102 | None:intergenic | 60.0% | |
TAGTACTCTGTGCAGGCCCG+AGG | - | chr1_3:72269348-72269367 | Msa0139060:CDS | 60.0% | |
AGGAGACGGCCGACATTGAC+TGG | + | chr1_3:72269547-72269566 | None:intergenic | 60.0% | |
AACAGTTCGCTGTGGCCCGA+AGG | + | chr1_3:72269579-72269598 | None:intergenic | 60.0% | |
GGGCTTCCACCTGTGCGCTT+AGG | - | chr1_3:72268008-72268027 | Msa0139060:intron | 65.0% | |
ACGTGCCCTAAGCGCACAGG+TGG | + | chr1_3:72268017-72268036 | None:intergenic | 65.0% | |
GGAACGTGCCCTAAGCGCAC+AGG | + | chr1_3:72268020-72268039 | None:intergenic | 65.0% | |
!! | TTTGGGCGTTGGAGCGCAGG+AGG | - | chr1_3:72268201-72268220 | Msa0139060:CDS | 65.0% |
!! | TTGGGCGTTGGAGCGCAGGA+GGG | - | chr1_3:72268202-72268221 | Msa0139060:CDS | 65.0% |
GCCTTCTCCCTCCTCAACCC+AGG | - | chr1_3:72268313-72268332 | Msa0139060:intron | 65.0% | |
! | GCCTGGGTTGAGGAGGGAGA+AGG | + | chr1_3:72268317-72268336 | None:intergenic | 65.0% |
CGCGCTGGGGTTCTGCTGCA+TGG | - | chr1_3:72268226-72268245 | Msa0139060:CDS | 70.0% | |
TGTGCAGGCCCGAGGCCGAT+TGG | - | chr1_3:72269356-72269375 | Msa0139060:CDS | 70.0% | |
GTGCAGGCCCGAGGCCGATT+GGG | - | chr1_3:72269357-72269376 | Msa0139060:CDS | 70.0% | |
GGCCCGAGGCCGATTGGGTT+AGG | - | chr1_3:72269362-72269381 | Msa0139060:CDS | 70.0% | |
GAGCGCAGGAGGGACGCGCT+GGG | - | chr1_3:72268212-72268231 | Msa0139060:CDS | 75.0% | |
AGCGCAGGAGGGACGCGCTG+GGG | - | chr1_3:72268213-72268232 | Msa0139060:CDS | 75.0% | |
! | GGAGCGCAGGAGGGACGCGC+TGG | - | chr1_3:72268211-72268230 | Msa0139060:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 72266140 | 72269747 | 72266140 | ID=Msa0139060;Name=Msa0139060 |
chr1_3 | mRNA | 72266140 | 72269747 | 72266140 | ID=Msa0139060-mRNA-1;Parent=Msa0139060;Name=Msa0139060-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|505 |
chr1_3 | exon | 72269294 | 72269747 | 72269294 | ID=Msa0139060-mRNA-1:exon:25242;Parent=Msa0139060-mRNA-1 |
chr1_3 | exon | 72268127 | 72268320 | 72268127 | ID=Msa0139060-mRNA-1:exon:25241;Parent=Msa0139060-mRNA-1 |
chr1_3 | exon | 72266140 | 72267009 | 72266140 | ID=Msa0139060-mRNA-1:exon:25240;Parent=Msa0139060-mRNA-1 |
chr1_3 | CDS | 72269294 | 72269747 | 72269294 | ID=Msa0139060-mRNA-1:cds;Parent=Msa0139060-mRNA-1 |
chr1_3 | CDS | 72268127 | 72268320 | 72268127 | ID=Msa0139060-mRNA-1:cds;Parent=Msa0139060-mRNA-1 |
chr1_3 | CDS | 72266140 | 72267009 | 72266140 | ID=Msa0139060-mRNA-1:cds;Parent=Msa0139060-mRNA-1 |
Gene Sequence |
Protein sequence |