Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389410 | XP_024632012.2 | 99.124 | 685 | 6 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389410 | sp|Q0WT48|DNJ21_ARATH | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389410 | A0A396JBB3 | 99.124 | 685 | 6 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023330 | Msa0389410 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa0028620 | Msa0389410 | 0.806904 | 6.558613e-50 | -8.615850e-47 |
| Msa0054820 | Msa0389410 | 0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0089980 | Msa0389410 | 0.814510 | 1.485376e-51 | -8.615850e-47 |
| Msa0090010 | Msa0389410 | 0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa0106620 | Msa0389410 | 0.849860 | 2.465171e-60 | -8.615850e-47 |
| Msa0106710 | Msa0389410 | 0.833438 | 5.332746e-56 | -8.615850e-47 |
| Msa0124320 | Msa0389410 | 0.834397 | 3.069951e-56 | -8.615850e-47 |
| Msa0130720 | Msa0389410 | 0.809039 | 2.303777e-50 | -8.615850e-47 |
| Msa0141400 | Msa0389410 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa0143850 | Msa0389410 | 0.802288 | 6.023916e-49 | -8.615850e-47 |
| Msa0198300 | Msa0389410 | 0.808915 | 2.449026e-50 | -8.615850e-47 |
| Msa0220730 | Msa0389410 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0231190 | Msa0389410 | 0.819909 | 9.066364e-53 | -8.615850e-47 |
| Msa0232020 | Msa0389410 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
| Msa0389410 | Msa0389910 | 0.807654 | 4.547165e-50 | -8.615850e-47 |
| Msa0389410 | Msa0395980 | 0.838961 | 2.106895e-57 | -8.615850e-47 |
| Msa0389410 | Msa0432160 | 0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0389410 | Msa0440510 | 0.823199 | 1.575376e-53 | -8.615850e-47 |
| Msa0389410 | Msa0450400 | -0.848262 | 6.856435e-60 | -8.615850e-47 |
| Msa0389410 | Msa0468250 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0389410 | Msa0476680 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0389410 | Msa0491000 | 0.819778 | 9.713456e-53 | -8.615850e-47 |
| Msa0389410 | Msa0521010 | 0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0389410 | Msa0526020 | 0.811054 | 8.482313e-51 | -8.615850e-47 |
| Msa0389410 | Msa0527360 | 0.800142 | 1.655618e-48 | -8.615850e-47 |
| Msa0389410 | Msa0553200 | 0.810409 | 1.169442e-50 | -8.615850e-47 |
| Msa0389410 | Msa0597770 | 0.803594 | 3.236443e-49 | -8.615850e-47 |
| Msa0389410 | Msa0615030 | 0.825039 | 5.825686e-54 | -8.615850e-47 |
| Msa0389410 | Msa0622120 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0389410 | Msa0624940 | 0.824195 | 9.206621e-54 | -8.615850e-47 |
| Msa0389410 | Msa0626270 | 0.814273 | 1.675646e-51 | -8.615850e-47 |
| Msa0389410 | Msa0626460 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0389410 | Msa0651560 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0389410 | Msa0661630 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0389410 | Msa0664540 | 0.857222 | 1.891125e-62 | -8.615850e-47 |
| Msa0389410 | Msa0689760 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0389410 | Msa0691340 | 0.810957 | 8.902718e-51 | -8.615850e-47 |
| Msa0389410 | Msa0698100 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
| Msa0389410 | Msa0702720 | 0.822419 | 2.392884e-53 | -8.615850e-47 |
| Msa0389410 | Msa0713510 | 0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0389410 | Msa0733010 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0389410 | Msa0763920 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa0389410 | Msa0789560 | 0.816334 | 5.835684e-52 | -8.615850e-47 |
| Msa0389410 | Msa0796300 | 0.831653 | 1.477265e-55 | -8.615850e-47 |
| Msa0389410 | Msa0814600 | 0.829391 | 5.285319e-55 | -8.615850e-47 |
| Msa0389410 | Msa0855870 | 0.827367 | 1.626540e-54 | -8.615850e-47 |
| Msa0389410 | Msa0899970 | 0.814523 | 1.475210e-51 | -8.615850e-47 |
| Msa0389410 | Msa0933760 | 0.840572 | 8.020670e-58 | -8.615850e-47 |
| Msa0389410 | Msa0934140 | 0.807677 | 4.496976e-50 | -8.615850e-47 |
| Msa0389410 | Msa0965290 | 0.809122 | 2.211934e-50 | -8.615850e-47 |
| Msa0389410 | Msa0971650 | 0.833905 | 4.076222e-56 | -8.615850e-47 |
| Msa0389410 | Msa0986510 | 0.805998 | 1.018143e-49 | -8.615850e-47 |
| Msa0389410 | Msa0999680 | 0.808396 | 3.161754e-50 | -8.615850e-47 |
| Msa0389410 | Msa1026480 | 0.824099 | 9.695680e-54 | -8.615850e-47 |
| Msa0389410 | Msa1065430 | 0.804021 | 2.638232e-49 | -8.615850e-47 |
| Msa0389410 | Msa1127380 | 0.809337 | 1.988522e-50 | -8.615850e-47 |
| Msa0389410 | Msa1129330 | 0.814949 | 1.187034e-51 | -8.615850e-47 |
| Msa0389410 | Msa1161810 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
| Msa0389410 | Msa1211340 | 0.801923 | 7.161344e-49 | -8.615850e-47 |
| Msa0389410 | Msa1259640 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0389410 | Msa1271130 | 0.829611 | 4.673575e-55 | -8.615850e-47 |
| Msa0389410 | Msa1283740 | 0.810347 | 1.205863e-50 | -8.615850e-47 |
| Msa0389410 | Msa1304940 | 0.800615 | 1.326098e-48 | -8.615850e-47 |
| Msa0389410 | Msa1325410 | -0.824016 | 1.014116e-53 | -8.615850e-47 |
| Msa0389410 | Msa1329790 | 0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa0389410 | Msa1336040 | 0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa0389410 | Msa1340200 | 0.810899 | 9.162458e-51 | -8.615850e-47 |
| Msa0389410 | Msa1341840 | 0.817191 | 3.747689e-52 | -8.615850e-47 |
| Msa0389410 | Msa1346660 | 0.817775 | 2.767663e-52 | -8.615850e-47 |
| Msa0389410 | Msa1349450 | 0.818971 | 1.483431e-52 | -8.615850e-47 |
| Msa0389410 | Msa1366550 | 0.808076 | 3.698469e-50 | -8.615850e-47 |
| Msa0389410 | Msa1392210 | 0.814207 | 1.732398e-51 | -8.615850e-47 |
| Msa0389410 | Msa1401460 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0389410 | Msa1411000 | 0.933904 | 9.203887e-96 | -8.615850e-47 |
| Msa0389410 | Msa1440900 | 0.817359 | 3.436179e-52 | -8.615850e-47 |
| Msa0389410 | Msa1458680 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0389410 | Msa1461370 | 0.826719 | 2.325006e-54 | -8.615850e-47 |
| Msa0389410 | Msa1463030 | 0.820105 | 8.174789e-53 | -8.615850e-47 |
| Msa0244970 | Msa0389410 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
| Msa0249310 | Msa0389410 | 0.834839 | 2.376843e-56 | -8.615850e-47 |
| Msa0287790 | Msa0389410 | 0.822327 | 2.513461e-53 | -8.615850e-47 |
| Msa0287870 | Msa0389410 | 0.816886 | 4.387723e-52 | -8.615850e-47 |
| Msa0288080 | Msa0389410 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0304570 | Msa0389410 | 0.814366 | 1.598037e-51 | -8.615850e-47 |
| Msa0322900 | Msa0389410 | 0.810347 | 1.205863e-50 | -8.615850e-47 |
| Msa0358400 | Msa0389410 | 0.811545 | 6.636235e-51 | -8.615850e-47 |
| Msa0362890 | Msa0389410 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389410 | MtrunA17_Chr2g0301881 | 99.124 | 685 | 6 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1417 |
| Msa0389410 | MtrunA17_Chr2g0312441 | 23.711 | 388 | 215 | 12 | 223 | 606 | 1869 | 2179 | 4.47e-21 | 99.0 |
| Msa0389410 | MtrunA17_Chr4g0003841 | 24.044 | 366 | 197 | 13 | 245 | 606 | 1845 | 2133 | 1.29e-17 | 87.8 |
| Msa0389410 | MtrunA17_Chr7g0242951 | 35.849 | 106 | 61 | 2 | 68 | 173 | 2 | 100 | 4.45e-14 | 75.5 |
| Msa0389410 | MtrunA17_Chr1g0206121 | 43.820 | 89 | 48 | 2 | 80 | 167 | 16 | 103 | 1.43e-13 | 72.0 |
| Msa0389410 | MtrunA17_Chr7g0269841 | 46.575 | 73 | 37 | 2 | 93 | 164 | 20 | 91 | 1.53e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389410 | AT1G79940.2 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa0389410 | AT1G79940.3 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa0389410 | AT1G79940.1 | 78.880 | 625 | 131 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1070 |
| Msa0389410 | AT1G79940.4 | 79.359 | 562 | 116 | 0 | 1 | 562 | 1 | 562 | 0.0 | 966 |
| Msa0389410 | AT4G21180.1 | 68.085 | 611 | 189 | 3 | 1 | 611 | 1 | 605 | 0.0 | 890 |
| Msa0389410 | AT4G21180.2 | 68.550 | 531 | 161 | 3 | 81 | 611 | 1 | 525 | 0.0 | 776 |
| Msa0389410 | AT1G20960.1 | 25.945 | 397 | 212 | 13 | 223 | 615 | 1850 | 2168 | 2.83e-23 | 106 |
| Msa0389410 | AT1G20960.2 | 25.945 | 397 | 212 | 13 | 223 | 615 | 1850 | 2168 | 2.83e-23 | 106 |
| Msa0389410 | AT3G08970.1 | 42.308 | 78 | 44 | 1 | 99 | 176 | 27 | 103 | 9.86e-13 | 71.6 |
| Msa0389410 | AT3G08970.2 | 42.308 | 78 | 44 | 1 | 99 | 176 | 27 | 103 | 9.86e-13 | 71.6 |
| Msa0389410 | AT1G61770.1 | 49.206 | 63 | 31 | 1 | 99 | 161 | 34 | 95 | 3.27e-11 | 65.5 |
Find 187 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGTCAATATGAAAAT+TGG | 0.118226 | 3_1:-94195263 | None:intergenic |
| ATGCTTGGATTAATAATAAA+AGG | 0.173947 | 3_1:+94199782 | Msa0389410:CDS |
| TGGCACTAGGGCTGCTGTTT+TGG | 0.177838 | 3_1:+94200194 | Msa0389410:CDS |
| TTCACAAGGAAGAGAATTTC+TGG | 0.179925 | 3_1:+94199851 | Msa0389410:CDS |
| TTTGATCCATTTAGTATTCT+TGG | 0.208184 | 3_1:+94195805 | Msa0389410:CDS |
| GCTCAGTTGACTCGTGAATT+TGG | 0.213919 | 3_1:+94197179 | Msa0389410:CDS |
| AAGTGATTTCAGACGGATTT+TGG | 0.235201 | 3_1:+94197223 | Msa0389410:CDS |
| GTGAATGCTCTTCGATTTCT+TGG | 0.238160 | 3_1:-94195336 | None:intergenic |
| TTGGGTGATTATGATTATTC+TGG | 0.255271 | 3_1:+94195583 | Msa0389410:CDS |
| TAACAACAGACTCAGTAATA+TGG | 0.262837 | 3_1:-94199140 | None:intergenic |
| AGAGTTTAAGGATTAAATTT+TGG | 0.269827 | 3_1:+94200637 | Msa0389410:three_prime_UTR |
| GCAGAAGGTAAGAACATTTC+AGG | 0.270069 | 3_1:+94199579 | Msa0389410:intron |
| CACAACTTTGTTATCGTATA+CGG | 0.271611 | 3_1:-94195302 | None:intergenic |
| TGCTTCGGCAACTGCCTTAC+TGG | 0.280590 | 3_1:-94200013 | None:intergenic |
| TTACTTCATGAAGCCTTCTT+TGG | 0.292359 | 3_1:+94196726 | Msa0389410:CDS |
| TTGATGCATCACATAGTTTC+CGG | 0.324576 | 3_1:-94196686 | None:intergenic |
| CTGAATATTGATGGGGCATC+TGG | 0.326145 | 3_1:+94196574 | Msa0389410:CDS |
| AGCAAGAGCAGGCCAAGTTT+TGG | 0.339056 | 3_1:+94196993 | Msa0389410:CDS |
| AAATTCTCTTCCTTGTGAAA+TGG | 0.342000 | 3_1:-94199847 | None:intergenic |
| CTTGACATTGTTACTGCTTT+GGG | 0.342791 | 3_1:+94195565 | Msa0389410:CDS |
| TGCTGTAACTGCTGCTTCTA+AGG | 0.343287 | 3_1:+94199945 | Msa0389410:CDS |
| TCTAATCCAAGAATACTAAA+TGG | 0.344969 | 3_1:-94195811 | None:intergenic |
| ACTTGACATTGTTACTGCTT+TGG | 0.348421 | 3_1:+94195564 | Msa0389410:CDS |
| CTGCCTTACTGGTCTCCTTC+GGG | 0.350492 | 3_1:-94200002 | None:intergenic |
| CGTGAAAACTACGAGAAATA+TGG | 0.363001 | 3_1:+94196085 | Msa0389410:CDS |
| ACTGCCTTACTGGTCTCCTT+CGG | 0.364831 | 3_1:-94200003 | None:intergenic |
| CAATTCCTTCTGAATATTGA+TGG | 0.365311 | 3_1:+94196565 | Msa0389410:CDS |
| TTATCTGAAACATTAAAGTA+TGG | 0.366856 | 3_1:+94200610 | Msa0389410:three_prime_UTR |
| ATTGGTAATGGGCAAGTTCC+AGG | 0.367032 | 3_1:+94200062 | Msa0389410:CDS |
| CATGGGGAAGGGCCGCAATC+AGG | 0.368067 | 3_1:-94199813 | None:intergenic |
| TGCAATGACTGCTCTCGATC+AGG | 0.368636 | 3_1:+94195365 | Msa0389410:CDS |
| TTTATTGCAGGGATTTCAAA+TGG | 0.379260 | 3_1:+94196528 | Msa0389410:intron |
| TGATCTCACCCTTTGAAAGA+TGG | 0.379492 | 3_1:-94195402 | None:intergenic |
| TAAGGCAATTGCAGAATCTA+AGG | 0.382179 | 3_1:+94199963 | Msa0389410:CDS |
| AATTCTCTTCCTTGTGAAAT+GGG | 0.386027 | 3_1:-94199846 | None:intergenic |
| GTTATCGTATACGGAACTAT+AGG | 0.388065 | 3_1:-94195293 | None:intergenic |
| GTTAGCGACAATGGCGGCTT+CGG | 0.394641 | 3_1:+94195220 | Msa0389410:exon |
| GGCGAAGCAGCTGAAAGTTC+TGG | 0.395830 | 3_1:+94200378 | Msa0389410:CDS |
| TCATGATATCAGCTAAATAA+AGG | 0.399212 | 3_1:-94200574 | None:intergenic |
| AAATGGGTAGTGAGGGGCAT+GGG | 0.401841 | 3_1:-94199830 | None:intergenic |
| TGAAGCCTTCTTTGGCCCCT+AGG | 0.405088 | 3_1:+94196734 | Msa0389410:CDS |
| AACAACAGACTCAGTAATAT+GGG | 0.413471 | 3_1:-94199139 | None:intergenic |
| AAACGTCTTCAACCTGGGTC+TGG | 0.414315 | 3_1:-94195907 | None:intergenic |
| AATAAGAATCAAGCTGCTAA+TGG | 0.416100 | 3_1:+94200339 | Msa0389410:CDS |
| GTCCATCTTAGTTTATCTGT+TGG | 0.416909 | 3_1:+94200521 | Msa0389410:three_prime_UTR |
| GGTAGTGAGGGGCATGGGGA+AGG | 0.423708 | 3_1:-94199825 | None:intergenic |
| TCATCATCGGTCCTTCGAAC+TGG | 0.424462 | 3_1:-94196908 | None:intergenic |
| CCCTTTGAAAGATGGATTTG+CGG | 0.426443 | 3_1:-94195394 | None:intergenic |
| AACGAACCCGGGCTGGCACT+AGG | 0.426633 | 3_1:+94200181 | Msa0389410:CDS |
| CAGCAGCCCTAGTGCCAGCC+CGG | 0.428229 | 3_1:-94200188 | None:intergenic |
| AACTTAGAAGCGTCCGAAAA+CGG | 0.430251 | 3_1:-94200668 | None:intergenic |
| ATTTCAGACTCTGCTGCGCC+AGG | 0.431081 | 3_1:-94195835 | None:intergenic |
| TTTATTACCTGTCTGCCATC+AGG | 0.432063 | 3_1:-94196112 | None:intergenic |
| TGTTGGACTACATTCATACT+TGG | 0.432457 | 3_1:+94200538 | Msa0389410:three_prime_UTR |
| GGCTGATGAGGGACCTATCA+TGG | 0.435870 | 3_1:+94200215 | Msa0389410:CDS |
| GCAGCATCCTGCACTAGTTA+AGG | 0.437254 | 3_1:+94197018 | Msa0389410:CDS |
| CACAAAGGCTGCTGAATACA+TGG | 0.438061 | 3_1:+94196880 | Msa0389410:CDS |
| GGATGAGGACAATGAGGATG+AGG | 0.438409 | 3_1:+94200254 | Msa0389410:CDS |
| GCAGAATCTAAGGAGGGTTC+CGG | 0.443562 | 3_1:+94199973 | Msa0389410:CDS |
| TGCTTGGATTAATAATAAAA+GGG | 0.445011 | 3_1:+94199783 | Msa0389410:CDS |
| GCTATTGTTTGTGCGACTCT+TGG | 0.446942 | 3_1:+94200115 | Msa0389410:CDS |
| TTATTGTCAATATGAAAATT+GGG | 0.448562 | 3_1:-94195262 | None:intergenic |
| TACTGAGTCTGTTGTTAAGA+AGG | 0.450238 | 3_1:+94199146 | Msa0389410:CDS |
| ATATGGGGCAGCTGCAGAAA+TGG | 0.450567 | 3_1:-94199123 | None:intergenic |
| AGCTATGAAAGTTAAGAAAA+GGG | 0.455787 | 3_1:+94194491 | None:intergenic |
| CTGAAATCACTTGCTAAAGA+TGG | 0.456602 | 3_1:-94197212 | None:intergenic |
| TTGTTTGTGCGACTCTTGGT+TGG | 0.457161 | 3_1:+94200119 | Msa0389410:CDS |
| ATTAATAATAAAAGGGGTAA+TGG | 0.462801 | 3_1:+94199790 | Msa0389410:CDS |
| TGTTTGTGCGACTCTTGGTT+GGG | 0.464424 | 3_1:+94200120 | Msa0389410:CDS |
| AGGATGCTGCTTCCAAAACT+TGG | 0.469816 | 3_1:-94197005 | None:intergenic |
| TATTTGCATTCTCTTGCCAT+TGG | 0.470723 | 3_1:+94196624 | Msa0389410:CDS |
| GGTCTCCTTCGGGCTTGCTC+CGG | 0.476446 | 3_1:-94199992 | None:intergenic |
| AATTCCTTCTGAATATTGAT+GGG | 0.478300 | 3_1:+94196566 | Msa0389410:CDS |
| AGTTATACCACGGAATGCTC+AGG | 0.478686 | 3_1:+94198202 | Msa0389410:CDS |
| TACCTTTCACAGTTGAATTG+AGG | 0.484964 | 3_1:-94194598 | None:intergenic |
| CTTCACCTTCTCCACTGCTT+CGG | 0.486591 | 3_1:-94200028 | None:intergenic |
| AGTATTCTTGGATTAGAGCC+TGG | 0.492053 | 3_1:+94195817 | Msa0389410:CDS |
| TTTAGGTTGTTGGGTACTGA+AGG | 0.493682 | 3_1:+94195198 | Msa0389410:five_prime_UTR |
| AAGGTTAGTTTCATGGATGA+AGG | 0.496224 | 3_1:+94199919 | Msa0389410:CDS |
| GCTCTTGCTTAATGTTCTTG+AGG | 0.496316 | 3_1:-94196979 | None:intergenic |
| AGTTACCCTCTGATGGGGCC+TGG | 0.496798 | 3_1:-94200080 | None:intergenic |
| CCACGGAATGCTCAGGGACA+TGG | 0.499438 | 3_1:+94198209 | Msa0389410:CDS |
| ACTCTTGGTTGGGCTGTGAC+AGG | 0.500034 | 3_1:+94200130 | Msa0389410:CDS |
| GAAGCAGTGGAGAAGGTGAA+GGG | 0.502372 | 3_1:+94200030 | Msa0389410:CDS |
| AGTTGCCGAAGCAGTGGAGA+AGG | 0.504802 | 3_1:+94200023 | Msa0389410:CDS |
| GTAGTGAGGGGCATGGGGAA+GGG | 0.505396 | 3_1:-94199824 | None:intergenic |
| CTTCATGAAGTAATAGTAAG+TGG | 0.505667 | 3_1:-94196716 | None:intergenic |
| AAATTATAGTTACCCTCTGA+TGG | 0.507044 | 3_1:-94200087 | None:intergenic |
| TCCTTGTGAAATGGGTAGTG+AGG | 0.507052 | 3_1:-94199838 | None:intergenic |
| TCGACTCCATCCTCCATGAT+AGG | 0.507260 | 3_1:-94200228 | None:intergenic |
| AGAAATGGTGCAATGCCTTC+AGG | 0.508926 | 3_1:-94199108 | None:intergenic |
| TCAATATTCAGAAGGAATTG+AGG | 0.511132 | 3_1:-94196562 | None:intergenic |
| CAATATTCAGAAGGAATTGA+GGG | 0.516320 | 3_1:-94196561 | None:intergenic |
| TAAGGCAGTTGCCGAAGCAG+TGG | 0.517068 | 3_1:+94200017 | Msa0389410:CDS |
| CCTTCATTAGCTCTTCGAGC+AGG | 0.522999 | 3_1:-94197259 | None:intergenic |
| CAGTCTCACATGTTACATCA+AGG | 0.523409 | 3_1:-94199717 | None:intergenic |
| GGATGGAGTCGAGGAGGATG+AGG | 0.525475 | 3_1:+94200239 | Msa0389410:CDS |
| CTTTGTCGAGCACATTGCTA+AGG | 0.526153 | 3_1:+94196033 | Msa0389410:CDS |
| ACGAACCCGGGCTGGCACTA+GGG | 0.527894 | 3_1:+94200182 | Msa0389410:CDS |
| TAAGATACCTTAACTAGTGC+AGG | 0.529625 | 3_1:-94197025 | None:intergenic |
| ATTTCAGGAACTTTATGAGA+TGG | 0.531199 | 3_1:+94199594 | Msa0389410:CDS |
| TGGCCATCCTGATGGCAGAC+AGG | 0.531999 | 3_1:+94196105 | Msa0389410:CDS |
| ACATTGTTACCATCCATGCT+TGG | 0.533449 | 3_1:+94199767 | Msa0389410:CDS |
| GTCCAACAGATAAACTAAGA+TGG | 0.534613 | 3_1:-94200523 | None:intergenic |
| TCAAGATCATCAAAGTATAC+CGG | 0.535024 | 3_1:+94196667 | Msa0389410:CDS |
| AAGCCCGAAGGAGACCAGTA+AGG | 0.539611 | 3_1:+94199999 | Msa0389410:CDS |
| CCGCAAATCCATCTTTCAAA+GGG | 0.541187 | 3_1:+94195394 | Msa0389410:CDS |
| TTATTGCAGGGATTTCAAAT+GGG | 0.542722 | 3_1:+94196529 | Msa0389410:intron |
| AATGGGTAGTGAGGGGCATG+GGG | 0.542912 | 3_1:-94199829 | None:intergenic |
| ACCGCAAATCCATCTTTCAA+AGG | 0.546433 | 3_1:+94195393 | Msa0389410:CDS |
| AGCAGCCCTAGTGCCAGCCC+GGG | 0.546721 | 3_1:-94200187 | None:intergenic |
| TGTTAAGAAGGTGGCCCGTA+AGG | 0.547535 | 3_1:+94199158 | Msa0389410:CDS |
| CTTTAGCAAGTGATTTCAGA+CGG | 0.548542 | 3_1:+94197216 | Msa0389410:CDS |
| AGCTCAACCACACCGATCGC+AGG | 0.549171 | 3_1:-94198242 | None:intergenic |
| GAGCTACTTACTCAAACAGC+AGG | 0.550361 | 3_1:+94199634 | Msa0389410:CDS |
| AATATTGATGGGGCATCTGG+TGG | 0.550386 | 3_1:+94196577 | Msa0389410:CDS |
| CAAGTTCCAGGCCCCATCAG+AGG | 0.551524 | 3_1:+94200074 | Msa0389410:CDS |
| CCTTGTGAAATGGGTAGTGA+GGG | 0.552245 | 3_1:-94199837 | None:intergenic |
| AGCGACAATGGCGGCTTCGG+AGG | 0.554782 | 3_1:+94195223 | Msa0389410:exon |
| AATTATAGTTACCCTCTGAT+GGG | 0.555780 | 3_1:-94200086 | None:intergenic |
| TACCTCAATTCAACTGTGAA+AGG | 0.555853 | 3_1:+94194596 | Msa0389410:five_prime_UTR |
| GCTTTCTCAATGTATCATCC+AGG | 0.559702 | 3_1:+94198262 | Msa0389410:CDS |
| GGAGAAGAGGGTATACAAGA+AGG | 0.560303 | 3_1:+94199742 | Msa0389410:CDS |
| GCAATGACTGCTCTCGATCA+GGG | 0.560912 | 3_1:+94195366 | Msa0389410:CDS |
| ATTATTAATCCAAGCATGGA+TGG | 0.567950 | 3_1:-94199776 | None:intergenic |
| GAGAAATATGGCCATCCTGA+TGG | 0.570373 | 3_1:+94196097 | Msa0389410:CDS |
| GAGGGACCTATCATGGAGGA+TGG | 0.572225 | 3_1:+94200222 | Msa0389410:CDS |
| CAAGAACATTAAGCAAGAGC+AGG | 0.574845 | 3_1:+94196982 | Msa0389410:CDS |
| ATATACCTAGGGGCCAAAGA+AGG | 0.576022 | 3_1:-94196739 | None:intergenic |
| ATTCTGTTTCGAACAATGTG+TGG | 0.576101 | 3_1:+94199887 | Msa0389410:CDS |
| TGTGAGACTGAAGGAGAAGA+GGG | 0.578820 | 3_1:+94199730 | Msa0389410:CDS |
| CACGGAATGCTCAGGGACAT+GGG | 0.581007 | 3_1:+94198210 | Msa0389410:CDS |
| ATTAGCTCTTCGAGCAGGCG+AGG | 0.583437 | 3_1:-94197254 | None:intergenic |
| ATGTGAGACTGAAGGAGAAG+AGG | 0.583582 | 3_1:+94199729 | Msa0389410:CDS |
| CGAAGCAGTGGAGAAGGTGA+AGG | 0.586598 | 3_1:+94200029 | Msa0389410:CDS |
| TATTATGTACAGCAAAGTCA+TGG | 0.589343 | 3_1:+94196850 | Msa0389410:intron |
| ACATGGAAATTCCAGTTCGA+AGG | 0.590375 | 3_1:+94196897 | Msa0389410:CDS |
| CGTATACGGAACTATAGGAA+TGG | 0.591388 | 3_1:-94195288 | None:intergenic |
| AAGCAGTGGAGAAGGTGAAG+GGG | 0.593292 | 3_1:+94200031 | Msa0389410:CDS |
| AAGTTCCAGGCCCCATCAGA+GGG | 0.594239 | 3_1:+94200075 | Msa0389410:CDS |
| CTCAGTGCTAGAAAGACTAC+CGG | 0.595452 | 3_1:+94199078 | Msa0389410:CDS |
| ACTTTATGAGATGGACTCAC+AGG | 0.596393 | 3_1:+94199603 | Msa0389410:CDS |
| GTACTGAAGGTTAGCGACAA+TGG | 0.599210 | 3_1:+94195211 | Msa0389410:exon |
| TGAGTCTGTTGTTAAGAAGG+TGG | 0.602960 | 3_1:+94199149 | Msa0389410:CDS |
| GCTTGGATTAATAATAAAAG+GGG | 0.607241 | 3_1:+94199784 | Msa0389410:CDS |
| AGCAGTGGAGAAGGTGAAGG+GGG | 0.609992 | 3_1:+94200032 | Msa0389410:CDS |
| GGCAATTGCAGAATCTAAGG+AGG | 0.610209 | 3_1:+94199966 | Msa0389410:CDS |
| AGTCTCACATGTTACATCAA+GGG | 0.611459 | 3_1:-94199716 | None:intergenic |
| GAAATGGGTAGTGAGGGGCA+TGG | 0.614569 | 3_1:-94199831 | None:intergenic |
| GGGTTCCGGAGCAAGCCCGA+AGG | 0.615406 | 3_1:+94199987 | Msa0389410:CDS |
| ACATGTTACATCAAGGGTCA+AGG | 0.619156 | 3_1:-94199710 | None:intergenic |
| TTACCTGTCTGCCATCAGGA+TGG | 0.619728 | 3_1:-94196108 | None:intergenic |
| ATTCCTTCTGAATATTGATG+GGG | 0.620788 | 3_1:+94196567 | Msa0389410:CDS |
| AAGGGGTAATGGCCTGATTG+CGG | 0.621780 | 3_1:+94199801 | Msa0389410:CDS |
| ATGCCCCATCAATATTCAGA+AGG | 0.625006 | 3_1:-94196570 | None:intergenic |
| CCTGCTCGAAGAGCTAATGA+AGG | 0.628255 | 3_1:+94197259 | Msa0389410:CDS |
| AATGCCTTCAGGTGATCCAC+CGG | 0.631005 | 3_1:-94199097 | None:intergenic |
| GTTATACCACGGAATGCTCA+GGG | 0.631735 | 3_1:+94198203 | Msa0389410:CDS |
| CCCTCACTACCCATTTCACA+AGG | 0.633141 | 3_1:+94199837 | Msa0389410:CDS |
| CCATGTCCCTGAGCATTCCG+TGG | 0.633239 | 3_1:-94198209 | None:intergenic |
| GTTACATCAAGGGTCAAGGA+AGG | 0.635132 | 3_1:-94199706 | None:intergenic |
| ATATTGATGGGGCATCTGGT+GGG | 0.635499 | 3_1:+94196578 | Msa0389410:CDS |
| GGGTGGCTGAGACCTGCGAT+CGG | 0.642660 | 3_1:+94198230 | Msa0389410:CDS |
| CGAGGAGGATGAGGACAATG+AGG | 0.642963 | 3_1:+94200248 | Msa0389410:CDS |
| TTCATCTTCTACCAACCAAG+AGG | 0.643041 | 3_1:-94200475 | None:intergenic |
| CATAAAGTCTATGAGTAGTG+AGG | 0.643107 | 3_1:+94195613 | Msa0389410:CDS |
| GCAATTGCAGAATCTAAGGA+GGG | 0.643438 | 3_1:+94199967 | Msa0389410:CDS |
| TATCATGGAGGATGGAGTCG+AGG | 0.651911 | 3_1:+94200230 | Msa0389410:CDS |
| TCAAGGAAGGCATCATATCG+AGG | 0.660722 | 3_1:-94199693 | None:intergenic |
| AGTGCTAGAAAGACTACCGG+TGG | 0.660959 | 3_1:+94199081 | Msa0389410:CDS |
| TAGACAACAGCAATGACCAA+TGG | 0.666183 | 3_1:-94196640 | None:intergenic |
| CTTCTGAAGAGGTTCATCAT+CGG | 0.667489 | 3_1:-94196921 | None:intergenic |
| GCAGTGGAGAAGGTGAAGGG+GGG | 0.669906 | 3_1:+94200033 | Msa0389410:CDS |
| CATGGAGGATGGAGTCGAGG+AGG | 0.673838 | 3_1:+94200233 | Msa0389410:CDS |
| AAAAGATGGCAGTTATACCA+CGG | 0.676825 | 3_1:+94198192 | Msa0389410:intron |
| ATTATAGTTACCCTCTGATG+GGG | 0.682503 | 3_1:-94200085 | None:intergenic |
| CTTGTGAAATGGGTAGTGAG+GGG | 0.685622 | 3_1:-94199836 | None:intergenic |
| ACAACAGACTCAGTAATATG+GGG | 0.687656 | 3_1:-94199138 | None:intergenic |
| CTGAAGGTTAGCGACAATGG+CGG | 0.691080 | 3_1:+94195214 | Msa0389410:exon |
| GATGTAACATGTGAGACTGA+AGG | 0.694718 | 3_1:+94199721 | Msa0389410:CDS |
| ACTACCGGTGGATCACCTGA+AGG | 0.695036 | 3_1:+94199093 | Msa0389410:CDS |
| GCTGAGACCTGCGATCGGTG+TGG | 0.698808 | 3_1:+94198235 | Msa0389410:CDS |
| AGTCATGGATGTCTTCACAA+AGG | 0.701337 | 3_1:+94196865 | Msa0389410:CDS |
| GTAGTCTTTCTAGCACTGAG+AGG | 0.706827 | 3_1:-94199075 | None:intergenic |
| GGAATGCTCAGGGACATGGG+TGG | 0.707591 | 3_1:+94198213 | Msa0389410:CDS |
| AGCTACTTACTCAAACAGCA+GGG | 0.713855 | 3_1:+94199635 | Msa0389410:CDS |
| TGATGAGGGACCTATCATGG+AGG | 0.828116 | 3_1:+94200218 | Msa0389410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTCTTTTTTTTCAAATT+TGG | + | chr3_1:94196772-94196791 | Msa0389410:intron | 10.0% |
| !!! | TATTCTTTTTTTTCAAATTT+GGG | + | chr3_1:94196773-94196792 | Msa0389410:intron | 10.0% |
| !! | TAAAAAAAGAATAATCTATT+TGG | - | chr3_1:94197068-94197087 | None:intergenic | 10.0% |
| !!! | ATAGATTATTCTTTTTTTAT+TGG | + | chr3_1:94197069-94197088 | Msa0389410:intron | 10.0% |
| !!! | TATTTTAAAACAACTTTAAT+AGG | + | chr3_1:94199013-94199032 | Msa0389410:intron | 10.0% |
| !! | TTATTGTCAATATGAAAATT+GGG | - | chr3_1:94195265-94195284 | None:intergenic | 15.0% |
| !! | ATTATTGTCAATATGAAAAT+TGG | - | chr3_1:94195266-94195285 | None:intergenic | 15.0% |
| !!! | AATTTTCATATTGACAATAA+TGG | + | chr3_1:94195265-94195284 | Msa0389410:CDS | 15.0% |
| !! | CTGAAATAAAGAAAAAATAT+AGG | + | chr3_1:94195851-94195870 | Msa0389410:CDS | 15.0% |
| !!! | CTTGTATATTTTATACTAAT+TGG | - | chr3_1:94196398-94196417 | None:intergenic | 15.0% |
| !!! | AAACAACAATTTTCAAAATA+GGG | - | chr3_1:94197373-94197392 | None:intergenic | 15.0% |
| !!! | TCTTTAGTTTTACAAAATTT+TGG | - | chr3_1:94197869-94197888 | None:intergenic | 15.0% |
| !! | ATTTCATAGTCTATTATTAT+AGG | + | chr3_1:94198661-94198680 | Msa0389410:intron | 15.0% |
| !!! | GTTAGTTTAATTTTATGATA+TGG | + | chr3_1:94198891-94198910 | Msa0389410:intron | 15.0% |
| !!! | TTTTGTTTTTGTTTTTCAAA+AGG | + | chr3_1:94200422-94200441 | Msa0389410:three_prime_UTR | 15.0% |
| !!! | TGTTTAGTTTTAGTTTCAAT+TGG | + | chr3_1:94194819-94194838 | Msa0389410:intron | 20.0% |
| !!! | TTTTGTAAAGAAACTTAGAT+TGG | + | chr3_1:94195014-94195033 | Msa0389410:intron | 20.0% |
| !! | TTTGTAAAGAAACTTAGATT+GGG | + | chr3_1:94195015-94195034 | Msa0389410:intron | 20.0% |
| !! | TTTGAACTTTATCTTAATTG+TGG | + | chr3_1:94195049-94195068 | Msa0389410:intron | 20.0% |
| !! | TGATGTTTATAGATTGAATT+AGG | + | chr3_1:94195128-94195147 | Msa0389410:intron | 20.0% |
| !!! | AGTTTTTTTTGTGTTGTTTT+AGG | + | chr3_1:94195181-94195200 | Msa0389410:five_prime_UTR | 20.0% |
| !!! | ACTGTATTTTTGTTTGTATT+AGG | + | chr3_1:94196151-94196170 | Msa0389410:intron | 20.0% |
| !! | TAACAAGAATGAAAGATAAA+TGG | - | chr3_1:94196811-94196830 | None:intergenic | 20.0% |
| !!! | GAAACAACAATTTTCAAAAT+AGG | - | chr3_1:94197374-94197393 | None:intergenic | 20.0% |
| !! | TATGCATTGGAAAATATTTA+AGG | - | chr3_1:94197436-94197455 | None:intergenic | 20.0% |
| !!! | ACATGGTTTTATATTATGAA+AGG | + | chr3_1:94197717-94197736 | Msa0389410:intron | 20.0% |
| !! | CTAAAGAAATTAAAAGAAAC+AGG | + | chr3_1:94197882-94197901 | Msa0389410:intron | 20.0% |
| !!! | TCAATGTAAAGTATTACTAT+TGG | + | chr3_1:94198298-94198317 | Msa0389410:intron | 20.0% |
| !!! | CAATGTAAAGTATTACTATT+GGG | + | chr3_1:94198299-94198318 | Msa0389410:intron | 20.0% |
| !! | ATAATAGACTATGAAATGAA+TGG | - | chr3_1:94198658-94198677 | None:intergenic | 20.0% |
| !! | TGAATGCTATCAAAATAATT+TGG | + | chr3_1:94198775-94198794 | Msa0389410:intron | 20.0% |
| !! | TATTGATATGTTCTTAGTTA+AGG | + | chr3_1:94198853-94198872 | Msa0389410:intron | 20.0% |
| !! | AGTATGACATAAAAATCAAT+TGG | - | chr3_1:94199491-94199510 | None:intergenic | 20.0% |
| !!! | TTTTATTATTAATCCAAGCA+TGG | - | chr3_1:94199783-94199802 | None:intergenic | 20.0% |
| !! | ATGCTTGGATTAATAATAAA+AGG | + | chr3_1:94199782-94199801 | Msa0389410:CDS | 20.0% |
| !! | TGCTTGGATTAATAATAAAA+GGG | + | chr3_1:94199783-94199802 | Msa0389410:CDS | 20.0% |
| !! | ATTAATAATAAAAGGGGTAA+TGG | + | chr3_1:94199790-94199809 | Msa0389410:CDS | 20.0% |
| !!! | TTATCTGAAACATTAAAGTA+TGG | + | chr3_1:94200610-94200629 | Msa0389410:three_prime_UTR | 20.0% |
| !!! | AGAGTTTAAGGATTAAATTT+TGG | + | chr3_1:94200637-94200656 | Msa0389410:three_prime_UTR | 20.0% |
| !!! | TATTAGATAGTTTTAGTTGA+GGG | + | chr3_1:94200694-94200713 | Msa0389410:three_prime_UTR | 20.0% |
| ! | AATAGTAGAAACAAAACCTA+GGG | - | chr3_1:94194729-94194748 | None:intergenic | 25.0% |
| !!! | GATTTGAATTTAGTACTGAT+TGG | + | chr3_1:94195681-94195700 | Msa0389410:intron | 25.0% |
| ! | TTTGATCCATTTAGTATTCT+TGG | + | chr3_1:94195805-94195824 | Msa0389410:CDS | 25.0% |
| ! | TCTAATCCAAGAATACTAAA+TGG | - | chr3_1:94195814-94195833 | None:intergenic | 25.0% |
| ! | AAAAACAATATCAGTTACAC+AGG | - | chr3_1:94195984-94196003 | None:intergenic | 25.0% |
| !!! | TTTTATTCGTTTTGTTTCAG+AGG | + | chr3_1:94196000-94196019 | Msa0389410:intron | 25.0% |
| ! | TGTATTAGGAAAATATACAG+TGG | + | chr3_1:94196165-94196184 | Msa0389410:intron | 25.0% |
| ! | GTATTAGGAAAATATACAGT+GGG | + | chr3_1:94196166-94196185 | Msa0389410:intron | 25.0% |
| ! | AATTCTTAACTGTGATTAAC+TGG | - | chr3_1:94196297-94196316 | None:intergenic | 25.0% |
| ! | AATTCCTTCTGAATATTGAT+GGG | + | chr3_1:94196566-94196585 | Msa0389410:CDS | 25.0% |
| !! | ATACTTTTACTTTGGATTGT+TGG | + | chr3_1:94196601-94196620 | Msa0389410:CDS | 25.0% |
| !! | AGTTAAGGTATCTTATTGTA+TGG | + | chr3_1:94197033-94197052 | Msa0389410:intron | 25.0% |
| ! | TAATTGTTTAAATTGGATCC+AGG | - | chr3_1:94197482-94197501 | None:intergenic | 25.0% |
| !! | AATTTTATGTAAACGCCTTA+AGG | + | chr3_1:94197641-94197660 | Msa0389410:intron | 25.0% |
| ! | TTATGAAAGGAACTAAATAG+TGG | + | chr3_1:94197730-94197749 | Msa0389410:intron | 25.0% |
| ! | ACGTATTTGCAAAAACATTT+GGG | - | chr3_1:94197834-94197853 | None:intergenic | 25.0% |
| ! | AACGTATTTGCAAAAACATT+TGG | - | chr3_1:94197835-94197854 | None:intergenic | 25.0% |
| !! | AATGTGCTTCATTTTAAATG+TGG | - | chr3_1:94198036-94198055 | None:intergenic | 25.0% |
| !! | AGAAAAACTTGATGATCATA+GGG | - | chr3_1:94198063-94198082 | None:intergenic | 25.0% |
| !! | AAGAAAAACTTGATGATCAT+AGG | - | chr3_1:94198064-94198083 | None:intergenic | 25.0% |
| ! | GAGGGAAATGAAAATATAAT+AGG | - | chr3_1:94198148-94198167 | None:intergenic | 25.0% |
| ! | ATATAATATACCAGAGACAA+AGG | - | chr3_1:94198587-94198606 | None:intergenic | 25.0% |
| ! | GAGAAAGCAATAATATTAGT+TGG | - | chr3_1:94198991-94199010 | None:intergenic | 25.0% |
| ! | TAAATACACAAGAAATAGCA+TGG | - | chr3_1:94199237-94199256 | None:intergenic | 25.0% |
| ! | CATAGAAAAATGTGCATAAA+TGG | - | chr3_1:94199298-94199317 | None:intergenic | 25.0% |
| !! | TACCATATATACGGATTAAA+GGG | + | chr3_1:94199357-94199376 | Msa0389410:intron | 25.0% |
| !! | GCTGTTTGAAATTTAAATGT+TGG | + | chr3_1:94199461-94199480 | Msa0389410:intron | 25.0% |
| ! | GCTTGGATTAATAATAAAAG+GGG | + | chr3_1:94199784-94199803 | Msa0389410:CDS | 25.0% |
| ! | AATGGAACCACAAATAAAAA+TGG | + | chr3_1:94200357-94200376 | Msa0389410:CDS | 25.0% |
| ! | TCATGATATCAGCTAAATAA+AGG | - | chr3_1:94200577-94200596 | None:intergenic | 25.0% |
| ! | AAGTATGGAAAAAGAGTTTA+AGG | + | chr3_1:94200625-94200644 | Msa0389410:three_prime_UTR | 25.0% |
| !!! | GTATTAGATAGTTTTAGTTG+AGG | + | chr3_1:94200693-94200712 | Msa0389410:three_prime_UTR | 25.0% |
| GAATAGTAGAAACAAAACCT+AGG | - | chr3_1:94194730-94194749 | None:intergenic | 30.0% | |
| TTGTGAAATCACGCAAAAAA+GGG | - | chr3_1:94194855-94194874 | None:intergenic | 30.0% | |
| ATTGTGAAATCACGCAAAAA+AGG | - | chr3_1:94194856-94194875 | None:intergenic | 30.0% | |
| !!! | TTTGTGTTGTTTTAGGTTGT+TGG | + | chr3_1:94195188-94195207 | Msa0389410:five_prime_UTR | 30.0% |
| !!! | TTGTGTTGTTTTAGGTTGTT+GGG | + | chr3_1:94195189-94195208 | Msa0389410:five_prime_UTR | 30.0% |
| ! | CACAACTTTGTTATCGTATA+CGG | - | chr3_1:94195305-94195324 | None:intergenic | 30.0% |
| TCGAAATCTGCAAAATCAAA+AGG | - | chr3_1:94195526-94195545 | None:intergenic | 30.0% | |
| TTGGGTGATTATGATTATTC+TGG | + | chr3_1:94195583-94195602 | Msa0389410:CDS | 30.0% | |
| TAAAATCTCATTCGAACACT+CGG | - | chr3_1:94195741-94195760 | None:intergenic | 30.0% | |
| GTGATCTGCATAAAATTTAC+AGG | - | chr3_1:94195781-94195800 | None:intergenic | 30.0% | |
| CTGAAATGCATAGAAAGTTA+GGG | - | chr3_1:94196469-94196488 | None:intergenic | 30.0% | |
| ACTGAAATGCATAGAAAGTT+AGG | - | chr3_1:94196470-94196489 | None:intergenic | 30.0% | |
| GTTTCTGATAGTTTACATTC+TGG | + | chr3_1:94196488-94196507 | Msa0389410:intron | 30.0% | |
| ! | TACGTGGAATATTTTATTGC+AGG | + | chr3_1:94196516-94196535 | Msa0389410:intron | 30.0% |
| ! | ACGTGGAATATTTTATTGCA+GGG | + | chr3_1:94196517-94196536 | Msa0389410:intron | 30.0% |
| TTTATTGCAGGGATTTCAAA+TGG | + | chr3_1:94196528-94196547 | Msa0389410:intron | 30.0% | |
| TTATTGCAGGGATTTCAAAT+GGG | + | chr3_1:94196529-94196548 | Msa0389410:intron | 30.0% | |
| CAATATTCAGAAGGAATTGA+GGG | - | chr3_1:94196564-94196583 | None:intergenic | 30.0% | |
| TCAATATTCAGAAGGAATTG+AGG | - | chr3_1:94196565-94196584 | None:intergenic | 30.0% | |
| CAATTCCTTCTGAATATTGA+TGG | + | chr3_1:94196565-94196584 | Msa0389410:CDS | 30.0% | |
| ATTCCTTCTGAATATTGATG+GGG | + | chr3_1:94196567-94196586 | Msa0389410:CDS | 30.0% | |
| TCAAGATCATCAAAGTATAC+CGG | + | chr3_1:94196667-94196686 | Msa0389410:CDS | 30.0% | |
| CTTCATGAAGTAATAGTAAG+TGG | - | chr3_1:94196719-94196738 | None:intergenic | 30.0% | |
| TTGCACAAGAAATATACCTA+GGG | - | chr3_1:94196753-94196772 | None:intergenic | 30.0% | |
| ATTGCACAAGAAATATACCT+AGG | - | chr3_1:94196754-94196773 | None:intergenic | 30.0% | |
| GAATGAAAGATAAATGGTGT+GGG | - | chr3_1:94196805-94196824 | None:intergenic | 30.0% | |
| AGAATGAAAGATAAATGGTG+TGG | - | chr3_1:94196806-94196825 | None:intergenic | 30.0% | |
| TATTATGTACAGCAAAGTCA+TGG | + | chr3_1:94196850-94196869 | Msa0389410:intron | 30.0% | |
| ! | AACATAAAAAGCTTCTGAAG+AGG | - | chr3_1:94196935-94196954 | None:intergenic | 30.0% |
| ! | TCTTCAGAAGCTTTTTATGT+TGG | + | chr3_1:94196934-94196953 | Msa0389410:CDS | 30.0% |
| ! | AGAAGCTTTTTATGTTGGTA+AGG | + | chr3_1:94196939-94196958 | Msa0389410:CDS | 30.0% |
| !!! | CCATGCTATTTTCTTTTAGA+CGG | + | chr3_1:94197142-94197161 | Msa0389410:intron | 30.0% |
| ! | TTATTCGAACTGCATTTTAG+AGG | + | chr3_1:94197587-94197606 | Msa0389410:intron | 30.0% |
| AGAGGAATTGAAATTGTGTA+TGG | + | chr3_1:94197605-94197624 | Msa0389410:intron | 30.0% | |
| TTTCCCTCATACAAATGTAT+TGG | + | chr3_1:94197686-94197705 | Msa0389410:intron | 30.0% | |
| CTTCCAATACATTTGTATGA+GGG | - | chr3_1:94197692-94197711 | None:intergenic | 30.0% | |
| ACTTCCAATACATTTGTATG+AGG | - | chr3_1:94197693-94197712 | None:intergenic | 30.0% | |
| CATACAAATGTATTGGAAGT+TGG | + | chr3_1:94197693-94197712 | Msa0389410:intron | 30.0% | |
| ! | AAAAACATTTGGGATTGAGT+TGG | - | chr3_1:94197824-94197843 | None:intergenic | 30.0% |
| ! | ATTGACTTAGATTCATTACC+TGG | - | chr3_1:94198283-94198302 | None:intergenic | 30.0% |
| ! | ATATGTAAAAGTGCAATTGG+AGG | - | chr3_1:94198337-94198356 | None:intergenic | 30.0% |
| ! | TGCATATGTAAAAGTGCAAT+TGG | - | chr3_1:94198340-94198359 | None:intergenic | 30.0% |
| ! | ATTGCACTTTTACATATGCA+CGG | + | chr3_1:94198340-94198359 | Msa0389410:intron | 30.0% |
| !! | TGAAAGAAAGTATCAGAGAA+GGG | - | chr3_1:94198461-94198480 | None:intergenic | 30.0% |
| !! | ATGAAAGAAAGTATCAGAGA+AGG | - | chr3_1:94198462-94198481 | None:intergenic | 30.0% |
| TCAATCAAGACCATTATTCA+AGG | + | chr3_1:94198607-94198626 | Msa0389410:intron | 30.0% | |
| ATAGACTATGAAATGAATGG+AGG | - | chr3_1:94198655-94198674 | None:intergenic | 30.0% | |
| !! | TAAGAACCAAAAGGTACTAA+AGG | - | chr3_1:94198804-94198823 | None:intergenic | 30.0% |
| ! | TTCTTATTCTGATGCCTTTT+GGG | + | chr3_1:94198818-94198837 | Msa0389410:intron | 30.0% |
| AACAACAGACTCAGTAATAT+GGG | - | chr3_1:94199142-94199161 | None:intergenic | 30.0% | |
| TAACAACAGACTCAGTAATA+TGG | - | chr3_1:94199143-94199162 | None:intergenic | 30.0% | |
| GCATTAAAACACTGTACATA+TGG | + | chr3_1:94199182-94199201 | Msa0389410:intron | 30.0% | |
| TTAATCCGTATATATGGTAC+TGG | - | chr3_1:94199356-94199375 | None:intergenic | 30.0% | |
| ! | GTACCATATATACGGATTAA+AGG | + | chr3_1:94199356-94199375 | Msa0389410:intron | 30.0% |
| ATCCCTTTAATCCGTATATA+TGG | - | chr3_1:94199362-94199381 | None:intergenic | 30.0% | |
| TAAAGGGATATTCTTCATGT+TGG | + | chr3_1:94199373-94199392 | Msa0389410:intron | 30.0% | |
| TTATGTGAAAATGCTACAGT+TGG | + | chr3_1:94199417-94199436 | Msa0389410:intron | 30.0% | |
| ATTTCAGGAACTTTATGAGA+TGG | + | chr3_1:94199594-94199613 | Msa0389410:CDS | 30.0% | |
| ATTATTAATCCAAGCATGGA+TGG | - | chr3_1:94199779-94199798 | None:intergenic | 30.0% | |
| AATTCTCTTCCTTGTGAAAT+GGG | - | chr3_1:94199849-94199868 | None:intergenic | 30.0% | |
| AAATTCTCTTCCTTGTGAAA+TGG | - | chr3_1:94199850-94199869 | None:intergenic | 30.0% | |
| !!! | TTTTCAGAAGGTTAGTTTCA+TGG | + | chr3_1:94199912-94199931 | Msa0389410:CDS | 30.0% |
| AATTATAGTTACCCTCTGAT+GGG | - | chr3_1:94200089-94200108 | None:intergenic | 30.0% | |
| AAATTATAGTTACCCTCTGA+TGG | - | chr3_1:94200090-94200109 | None:intergenic | 30.0% | |
| !!! | AGCAGCTTGATTCTTATTTT+TGG | - | chr3_1:94200337-94200356 | None:intergenic | 30.0% |
| AATAAGAATCAAGCTGCTAA+TGG | + | chr3_1:94200339-94200358 | Msa0389410:CDS | 30.0% | |
| !!! | TTGTTTTTGAGTGTGTGAAG+TGG | - | chr3_1:94194540-94194559 | None:intergenic | 35.0% |
| TACCTCAATTCAACTGTGAA+AGG | + | chr3_1:94194596-94194615 | Msa0389410:five_prime_UTR | 35.0% | |
| TACCTTTCACAGTTGAATTG+AGG | - | chr3_1:94194601-94194620 | None:intergenic | 35.0% | |
| TTGGGAATCGAAAATTGGAT+CGG | - | chr3_1:94194675-94194694 | None:intergenic | 35.0% | |
| CTATGAAATCGAAGGAGATT+GGG | - | chr3_1:94194693-94194712 | None:intergenic | 35.0% | |
| ACTATGAAATCGAAGGAGAT+TGG | - | chr3_1:94194694-94194713 | None:intergenic | 35.0% | |
| AAGGTCAACTATGAAATCGA+AGG | - | chr3_1:94194701-94194720 | None:intergenic | 35.0% | |
| AACAAAACCTAGGGATTGAA+AGG | - | chr3_1:94194720-94194739 | None:intergenic | 35.0% | |
| GTTATCGTATACGGAACTAT+AGG | - | chr3_1:94195296-94195315 | None:intergenic | 35.0% | |
| ACTTGACATTGTTACTGCTT+TGG | + | chr3_1:94195564-94195583 | Msa0389410:CDS | 35.0% | |
| CTTGACATTGTTACTGCTTT+GGG | + | chr3_1:94195565-94195584 | Msa0389410:CDS | 35.0% | |
| CATAAAGTCTATGAGTAGTG+AGG | + | chr3_1:94195613-94195632 | Msa0389410:CDS | 35.0% | |
| CGTGAAAACTACGAGAAATA+TGG | + | chr3_1:94196085-94196104 | Msa0389410:CDS | 35.0% | |
| GAATTCAGTTAGTGACTGTT+AGG | + | chr3_1:94196312-94196331 | Msa0389410:intron | 35.0% | |
| CTGTTAGGAATTCAGTTAGA+AGG | + | chr3_1:94196327-94196346 | Msa0389410:intron | 35.0% | |
| TGGTGTATATATAGTACAGC+TGG | - | chr3_1:94196362-94196381 | None:intergenic | 35.0% | |
| TAGAAAGTTAGGGAAAGTGA+AGG | - | chr3_1:94196459-94196478 | None:intergenic | 35.0% | |
| TCTGATAGTTTACATTCTGG+TGG | + | chr3_1:94196491-94196510 | Msa0389410:intron | 35.0% | |
| CTGATAGTTTACATTCTGGT+GGG | + | chr3_1:94196492-94196511 | Msa0389410:intron | 35.0% | |
| TGATAGTTTACATTCTGGTG+GGG | + | chr3_1:94196493-94196512 | Msa0389410:intron | 35.0% | |
| TATTTGCATTCTCTTGCCAT+TGG | + | chr3_1:94196624-94196643 | Msa0389410:CDS | 35.0% | |
| TTGATGCATCACATAGTTTC+CGG | - | chr3_1:94196689-94196708 | None:intergenic | 35.0% | |
| TTACTTCATGAAGCCTTCTT+TGG | + | chr3_1:94196726-94196745 | Msa0389410:CDS | 35.0% | |
| TGCACAAGAAATATACCTAG+GGG | - | chr3_1:94196752-94196771 | None:intergenic | 35.0% | |
| TAAGATACCTTAACTAGTGC+AGG | - | chr3_1:94197028-94197047 | None:intergenic | 35.0% | |
| ! | AAGGTATCTTATTGTATGGC+AGG | + | chr3_1:94197037-94197056 | Msa0389410:intron | 35.0% |
| CCGTCTAAAAGAAAATAGCA+TGG | - | chr3_1:94197145-94197164 | None:intergenic | 35.0% | |
| ! | CTGAAATCACTTGCTAAAGA+TGG | - | chr3_1:94197215-94197234 | None:intergenic | 35.0% |
| CTTTAGCAAGTGATTTCAGA+CGG | + | chr3_1:94197216-94197235 | Msa0389410:CDS | 35.0% | |
| !! | AAGTGATTTCAGACGGATTT+TGG | + | chr3_1:94197223-94197242 | Msa0389410:CDS | 35.0% |
| ! | ACTATTTCTCTTCTGCTTCT+TGG | + | chr3_1:94197292-94197311 | Msa0389410:intron | 35.0% |
| AAAATAGGGTGCAGACTAAA+GGG | - | chr3_1:94197359-94197378 | None:intergenic | 35.0% | |
| TGCAGTGATTTAGTATGCAT+TGG | - | chr3_1:94197449-94197468 | None:intergenic | 35.0% | |
| TTTAAATTGGATCCAGGCAT+GGG | - | chr3_1:94197476-94197495 | None:intergenic | 35.0% | |
| ATAATCCACATGCTTCCTTA+AGG | - | chr3_1:94197659-94197678 | None:intergenic | 35.0% | |
| ATGTATTGGAAGTTGGAACA+TGG | + | chr3_1:94197700-94197719 | Msa0389410:intron | 35.0% | |
| TGTAACTATCTTTAGATGCG+TGG | + | chr3_1:94197754-94197773 | Msa0389410:intron | 35.0% | |
| GCAGTCTCAGTAATTCAATA+AGG | - | chr3_1:94197981-94198000 | None:intergenic | 35.0% | |
| TGTGGTTATCATCTTAGCTT+CGG | - | chr3_1:94198018-94198037 | None:intergenic | 35.0% | |
| GTCATCATTGTCTTATGTGA+TGG | + | chr3_1:94198084-94198103 | Msa0389410:intron | 35.0% | |
| ACTAGCGCATTAAACAATGA+GGG | - | chr3_1:94198166-94198185 | None:intergenic | 35.0% | |
| AAAAGATGGCAGTTATACCA+CGG | + | chr3_1:94198192-94198211 | Msa0389410:intron | 35.0% | |
| TTACATATGCACGGAAATGA+AGG | + | chr3_1:94198349-94198368 | Msa0389410:intron | 35.0% | |
| !! | GAAAGAAAGTATCAGAGAAG+GGG | - | chr3_1:94198460-94198479 | None:intergenic | 35.0% |
| ATCAAGACCATTATTCAAGG+AGG | + | chr3_1:94198610-94198629 | Msa0389410:intron | 35.0% | |
| TCAAGACCATTATTCAAGGA+GGG | + | chr3_1:94198611-94198630 | Msa0389410:intron | 35.0% | |
| TATTGACCCTCCTTGAATAA+TGG | - | chr3_1:94198620-94198639 | None:intergenic | 35.0% | |
| ATAGGAGAAGCTTTCATCAT+AGG | + | chr3_1:94198679-94198698 | Msa0389410:intron | 35.0% | |
| GAAGCTTTCATCATAGGATA+CGG | + | chr3_1:94198685-94198704 | Msa0389410:intron | 35.0% | |
| ! | TGGTTTCCTTTAGTACCTTT+TGG | + | chr3_1:94198795-94198814 | Msa0389410:intron | 35.0% |
| GCATCAGAATAAGAACCAAA+AGG | - | chr3_1:94198813-94198832 | None:intergenic | 35.0% | |
| ! | GTTCTTATTCTGATGCCTTT+TGG | + | chr3_1:94198817-94198836 | Msa0389410:intron | 35.0% |
| ! | CTAGAATGCTTTGTTGAACA+AGG | - | chr3_1:94198956-94198975 | None:intergenic | 35.0% |
| ACAACAGACTCAGTAATATG+GGG | - | chr3_1:94199141-94199160 | None:intergenic | 35.0% | |
| TACTGAGTCTGTTGTTAAGA+AGG | + | chr3_1:94199146-94199165 | Msa0389410:CDS | 35.0% | |
| !!! | AGTGTTTTAATGCACCTTAC+GGG | - | chr3_1:94199175-94199194 | None:intergenic | 35.0% |
| !!! | CAGTGTTTTAATGCACCTTA+CGG | - | chr3_1:94199176-94199195 | None:intergenic | 35.0% |
| TACATCGTCTAATGTTCTTG+AGG | + | chr3_1:94199255-94199274 | Msa0389410:intron | 35.0% | |
| ACATCGTCTAATGTTCTTGA+GGG | + | chr3_1:94199256-94199275 | Msa0389410:intron | 35.0% | |
| TGGATCCAGTACCATATATA+CGG | + | chr3_1:94199348-94199367 | Msa0389410:intron | 35.0% | |
| !! | ATTCTTCATGTTGGTTCTAG+CGG | + | chr3_1:94199382-94199401 | Msa0389410:intron | 35.0% |
| CTGCATAGGAAGAAGAAAAA+TGG | - | chr3_1:94199563-94199582 | None:intergenic | 35.0% | |
| ! | TTTTCTTCTTCCTATGCAGA+AGG | + | chr3_1:94199564-94199583 | Msa0389410:intron | 35.0% |
| AATGTTCTTACCTTCTGCAT+AGG | - | chr3_1:94199577-94199596 | None:intergenic | 35.0% | |
| AGTCTCACATGTTACATCAA+GGG | - | chr3_1:94199719-94199738 | None:intergenic | 35.0% | |
| TTCACAAGGAAGAGAATTTC+TGG | + | chr3_1:94199851-94199870 | Msa0389410:CDS | 35.0% | |
| !!! | GAATTTCTGGTTTTTGCTTG+CGG | + | chr3_1:94199864-94199883 | Msa0389410:CDS | 35.0% |
| ATTCTGTTTCGAACAATGTG+TGG | + | chr3_1:94199887-94199906 | Msa0389410:CDS | 35.0% | |
| !!! | CAATGTGTGGTTTTTTCAGA+AGG | + | chr3_1:94199900-94199919 | Msa0389410:CDS | 35.0% |
| !! | AAGGTTAGTTTCATGGATGA+AGG | + | chr3_1:94199919-94199938 | Msa0389410:CDS | 35.0% |
| TAAGGCAATTGCAGAATCTA+AGG | + | chr3_1:94199963-94199982 | Msa0389410:CDS | 35.0% | |
| ATTATAGTTACCCTCTGATG+GGG | - | chr3_1:94200088-94200107 | None:intergenic | 35.0% | |
| !!! | TCAAAGTTTTGAAACGAACC+CGG | + | chr3_1:94200169-94200188 | Msa0389410:CDS | 35.0% |
| !!! | TGCTTCGCCATTTTTATTTG+TGG | - | chr3_1:94200367-94200386 | None:intergenic | 35.0% |
| GGAACAAAAAGATGAGAGTA+TGG | - | chr3_1:94200457-94200476 | None:intergenic | 35.0% | |
| ! | TCTCATCTTTTTGTTCCTCT+TGG | + | chr3_1:94200460-94200479 | Msa0389410:three_prime_UTR | 35.0% |
| ! | ATCTTTTTGTTCCTCTTGGT+TGG | + | chr3_1:94200464-94200483 | Msa0389410:three_prime_UTR | 35.0% |
| GTCCATCTTAGTTTATCTGT+TGG | + | chr3_1:94200521-94200540 | Msa0389410:three_prime_UTR | 35.0% | |
| GTCCAACAGATAAACTAAGA+TGG | - | chr3_1:94200526-94200545 | None:intergenic | 35.0% | |
| TGTTGGACTACATTCATACT+TGG | + | chr3_1:94200538-94200557 | Msa0389410:three_prime_UTR | 35.0% | |
| !! | TTTGGTTCAGTTTCCGTTTT+CGG | + | chr3_1:94200655-94200674 | Msa0389410:three_prime_UTR | 35.0% |
| GGAGATTGGGAATCGAAAAT+TGG | - | chr3_1:94194680-94194699 | None:intergenic | 40.0% | |
| TAGTTGACCTTTCAATCCCT+AGG | + | chr3_1:94194710-94194729 | Msa0389410:intron | 40.0% | |
| !! | TTTAGGTTGTTGGGTACTGA+AGG | + | chr3_1:94195198-94195217 | Msa0389410:five_prime_UTR | 40.0% |
| CGTATACGGAACTATAGGAA+TGG | - | chr3_1:94195291-94195310 | None:intergenic | 40.0% | |
| GTGAATGCTCTTCGATTTCT+TGG | - | chr3_1:94195339-94195358 | None:intergenic | 40.0% | |
| ACCGCAAATCCATCTTTCAA+AGG | + | chr3_1:94195393-94195412 | Msa0389410:CDS | 40.0% | |
| ! | CCCTTTGAAAGATGGATTTG+CGG | - | chr3_1:94195397-94195416 | None:intergenic | 40.0% |
| CCGCAAATCCATCTTTCAAA+GGG | + | chr3_1:94195394-94195413 | Msa0389410:CDS | 40.0% | |
| ! | TGATCTCACCCTTTGAAAGA+TGG | - | chr3_1:94195405-94195424 | None:intergenic | 40.0% |
| AATCCAGAAACACGCAGATA+CGG | - | chr3_1:94195434-94195453 | None:intergenic | 40.0% | |
| ! | AGTATTCTTGGATTAGAGCC+TGG | + | chr3_1:94195817-94195836 | Msa0389410:CDS | 40.0% |
| ! | GGTCTGGATTTTTATCAGGA+TGG | - | chr3_1:94195894-94195913 | None:intergenic | 40.0% |
| ATGAGAAACGTCTTCAACCT+GGG | - | chr3_1:94195915-94195934 | None:intergenic | 40.0% | |
| AATGAGAAACGTCTTCAACC+TGG | - | chr3_1:94195916-94195935 | None:intergenic | 40.0% | |
| TTTATTACCTGTCTGCCATC+AGG | - | chr3_1:94196115-94196134 | None:intergenic | 40.0% | |
| CAGAATTCCGACTTAGGTAA+AGG | - | chr3_1:94196234-94196253 | None:intergenic | 40.0% | |
| GACTAACAGAATTCCGACTT+AGG | - | chr3_1:94196240-94196259 | None:intergenic | 40.0% | |
| ! | TAATTGGCACAAGAGTACAG+TGG | - | chr3_1:94196382-94196401 | None:intergenic | 40.0% |
| ATGCCCCATCAATATTCAGA+AGG | - | chr3_1:94196573-94196592 | None:intergenic | 40.0% | |
| ! | CTGGTGGGATACTTTTACTT+TGG | + | chr3_1:94196593-94196612 | Msa0389410:CDS | 40.0% |
| TAGACAACAGCAATGACCAA+TGG | - | chr3_1:94196643-94196662 | None:intergenic | 40.0% | |
| AGTCATGGATGTCTTCACAA+AGG | + | chr3_1:94196865-94196884 | Msa0389410:CDS | 40.0% | |
| ACATGGAAATTCCAGTTCGA+AGG | + | chr3_1:94196897-94196916 | Msa0389410:CDS | 40.0% | |
| ! | CTTCTGAAGAGGTTCATCAT+CGG | - | chr3_1:94196924-94196943 | None:intergenic | 40.0% |
| GCTCTTGCTTAATGTTCTTG+AGG | - | chr3_1:94196982-94197001 | None:intergenic | 40.0% | |
| CAAGAACATTAAGCAAGAGC+AGG | + | chr3_1:94196982-94197001 | Msa0389410:CDS | 40.0% | |
| CAAAATAGGGTGCAGACTAA+AGG | - | chr3_1:94197360-94197379 | None:intergenic | 40.0% | |
| GTTTAAATTGGATCCAGGCA+TGG | - | chr3_1:94197477-94197496 | None:intergenic | 40.0% | |
| CAGTGATAGAAAGCAGTCAA+TGG | + | chr3_1:94197552-94197571 | Msa0389410:intron | 40.0% | |
| TATCAACCCACACACAAGAA+TGG | - | chr3_1:94197929-94197948 | None:intergenic | 40.0% | |
| GACTAGCGCATTAAACAATG+AGG | - | chr3_1:94198167-94198186 | None:intergenic | 40.0% | |
| ! | GCGCTAGTCTCTATAAAAGA+TGG | + | chr3_1:94198178-94198197 | Msa0389410:intron | 40.0% |
| GCTTTCTCAATGTATCATCC+AGG | + | chr3_1:94198262-94198281 | Msa0389410:CDS | 40.0% | |
| TCAACAGTTTCCTTTGTCTC+TGG | + | chr3_1:94198574-94198593 | Msa0389410:intron | 40.0% | |
| GTTAAGGATGAAAAGCTGTC+TGG | + | chr3_1:94198869-94198888 | Msa0389410:intron | 40.0% | |
| TGATTTATGACCTCCTATGC+AGG | + | chr3_1:94199047-94199066 | Msa0389410:intron | 40.0% | |
| TGAGTCTGTTGTTAAGAAGG+TGG | + | chr3_1:94199149-94199168 | Msa0389410:CDS | 40.0% | |
| AGTAGCTAGCTAGCTACAAT+TGG | - | chr3_1:94199325-94199344 | None:intergenic | 40.0% | |
| ATTGTAGCTAGCTAGCTACT+CGG | + | chr3_1:94199325-94199344 | Msa0389410:intron | 40.0% | |
| GCAGAAGGTAAGAACATTTC+AGG | + | chr3_1:94199579-94199598 | Msa0389410:intron | 40.0% | |
| ! | ACTTTATGAGATGGACTCAC+AGG | + | chr3_1:94199603-94199622 | Msa0389410:CDS | 40.0% |
| AGCTACTTACTCAAACAGCA+GGG | + | chr3_1:94199635-94199654 | Msa0389410:CDS | 40.0% | |
| ACATGTTACATCAAGGGTCA+AGG | - | chr3_1:94199713-94199732 | None:intergenic | 40.0% | |
| CAGTCTCACATGTTACATCA+AGG | - | chr3_1:94199720-94199739 | None:intergenic | 40.0% | |
| GATGTAACATGTGAGACTGA+AGG | + | chr3_1:94199721-94199740 | Msa0389410:CDS | 40.0% | |
| ACATTGTTACCATCCATGCT+TGG | + | chr3_1:94199767-94199786 | Msa0389410:CDS | 40.0% | |
| GCAATTGCAGAATCTAAGGA+GGG | + | chr3_1:94199967-94199986 | Msa0389410:CDS | 40.0% | |
| !!! | CAAAGTTTTGAAACGAACCC+GGG | + | chr3_1:94200170-94200189 | Msa0389410:CDS | 40.0% |
| TTCATCTTCTACCAACCAAG+AGG | - | chr3_1:94200478-94200497 | None:intergenic | 40.0% | |
| !! | AACTTAGAAGCGTCCGAAAA+CGG | - | chr3_1:94200671-94200690 | None:intergenic | 40.0% |
| GTACTGAAGGTTAGCGACAA+TGG | + | chr3_1:94195211-94195230 | Msa0389410:exon | 45.0% | |
| ATCCAGAAACACGCAGATAC+GGG | - | chr3_1:94195433-94195452 | None:intergenic | 45.0% | |
| ! | CCTGGGTCTGGATTTTTATC+AGG | - | chr3_1:94195898-94195917 | None:intergenic | 45.0% |
| CCTGATAAAAATCCAGACCC+AGG | + | chr3_1:94195895-94195914 | Msa0389410:CDS | 45.0% | |
| CTTTGTCGAGCACATTGCTA+AGG | + | chr3_1:94196033-94196052 | Msa0389410:CDS | 45.0% | |
| ! | TCGTAGTTTTCACGAGCTAC+TGG | - | chr3_1:94196079-94196098 | None:intergenic | 45.0% |
| GAGAAATATGGCCATCCTGA+TGG | + | chr3_1:94196097-94196116 | Msa0389410:CDS | 45.0% | |
| ACTGCCTTGTATTCGGAGTT+GGG | + | chr3_1:94196191-94196210 | Msa0389410:intron | 45.0% | |
| AAAGCCCAACTCCGAATACA+AGG | - | chr3_1:94196198-94196217 | None:intergenic | 45.0% | |
| TTGTATTCGGAGTTGGGCTT+TGG | + | chr3_1:94196197-94196216 | Msa0389410:intron | 45.0% | |
| CTTAGGTAAAGGACAGGACT+GGG | - | chr3_1:94196223-94196242 | None:intergenic | 45.0% | |
| ACTTAGGTAAAGGACAGGAC+TGG | - | chr3_1:94196224-94196243 | None:intergenic | 45.0% | |
| GTCCTGTCCTTTACCTAAGT+CGG | + | chr3_1:94196224-94196243 | Msa0389410:intron | 45.0% | |
| TTCCGACTTAGGTAAAGGAC+AGG | - | chr3_1:94196229-94196248 | None:intergenic | 45.0% | |
| GGAATTCTGTTAGTCACTGC+TGG | + | chr3_1:94196245-94196264 | Msa0389410:intron | 45.0% | |
| GGGAAAGTGAAGGAAAGAGA+GGG | - | chr3_1:94196449-94196468 | None:intergenic | 45.0% | |
| AGGGAAAGTGAAGGAAAGAG+AGG | - | chr3_1:94196450-94196469 | None:intergenic | 45.0% | |
| ! | CTGAATATTGATGGGGCATC+TGG | + | chr3_1:94196574-94196593 | Msa0389410:CDS | 45.0% |
| ! | AATATTGATGGGGCATCTGG+TGG | + | chr3_1:94196577-94196596 | Msa0389410:CDS | 45.0% |
| ! | ATATTGATGGGGCATCTGGT+GGG | + | chr3_1:94196578-94196597 | Msa0389410:CDS | 45.0% |
| ATATACCTAGGGGCCAAAGA+AGG | - | chr3_1:94196742-94196761 | None:intergenic | 45.0% | |
| CACAAAGGCTGCTGAATACA+TGG | + | chr3_1:94196880-94196899 | Msa0389410:CDS | 45.0% | |
| ! | AGGATGCTGCTTCCAAAACT+TGG | - | chr3_1:94197008-94197027 | None:intergenic | 45.0% |
| !! | GCTCAGTTGACTCGTGAATT+TGG | + | chr3_1:94197179-94197198 | Msa0389410:CDS | 45.0% |
| AAAGCAGTCAATGGCTGAAG+TGG | + | chr3_1:94197561-94197580 | Msa0389410:intron | 45.0% | |
| ! | AAACGCCTTAAGGAAGCATG+TGG | + | chr3_1:94197651-94197670 | Msa0389410:intron | 45.0% |
| GGTAAGCCATTCTTGTGTGT+GGG | + | chr3_1:94197920-94197939 | Msa0389410:intron | 45.0% | |
| AGTTATACCACGGAATGCTC+AGG | + | chr3_1:94198202-94198221 | Msa0389410:CDS | 45.0% | |
| GTTATACCACGGAATGCTCA+GGG | + | chr3_1:94198203-94198222 | Msa0389410:CDS | 45.0% | |
| ATCACCACAACCCTTAGCTA+GGG | - | chr3_1:94198411-94198430 | None:intergenic | 45.0% | |
| TATCACCACAACCCTTAGCT+AGG | - | chr3_1:94198412-94198431 | None:intergenic | 45.0% | |
| TTGTGGTGATACCCTGATCT+GGG | + | chr3_1:94198421-94198440 | Msa0389410:intron | 45.0% | |
| TACGTGCAGCATAACCCAAA+AGG | - | chr3_1:94198835-94198854 | None:intergenic | 45.0% | |
| ! | GTAGTCTTTCTAGCACTGAG+AGG | - | chr3_1:94199078-94199097 | None:intergenic | 45.0% |
| CTCAGTGCTAGAAAGACTAC+CGG | + | chr3_1:94199078-94199097 | Msa0389410:CDS | 45.0% | |
| AGAAATGGTGCAATGCCTTC+AGG | - | chr3_1:94199111-94199130 | None:intergenic | 45.0% | |
| ! | TGGACACAAGCATTTAGAGC+AGG | - | chr3_1:94199217-94199236 | None:intergenic | 45.0% |
| TCGTGAGCATGGGATCAAAT+TGG | - | chr3_1:94199520-94199539 | None:intergenic | 45.0% | |
| GAGCTACTTACTCAAACAGC+AGG | + | chr3_1:94199634-94199653 | Msa0389410:CDS | 45.0% | |
| !! | TCAAGGAAGGCATCATATCG+AGG | - | chr3_1:94199696-94199715 | None:intergenic | 45.0% |
| GTTACATCAAGGGTCAAGGA+AGG | - | chr3_1:94199709-94199728 | None:intergenic | 45.0% | |
| ATGTGAGACTGAAGGAGAAG+AGG | + | chr3_1:94199729-94199748 | Msa0389410:CDS | 45.0% | |
| TGTGAGACTGAAGGAGAAGA+GGG | + | chr3_1:94199730-94199749 | Msa0389410:CDS | 45.0% | |
| ! | GGAGAAGAGGGTATACAAGA+AGG | + | chr3_1:94199742-94199761 | Msa0389410:CDS | 45.0% |
| CTTGTGAAATGGGTAGTGAG+GGG | - | chr3_1:94199839-94199858 | None:intergenic | 45.0% | |
| CCTTGTGAAATGGGTAGTGA+GGG | - | chr3_1:94199840-94199859 | None:intergenic | 45.0% | |
| TCCTTGTGAAATGGGTAGTG+AGG | - | chr3_1:94199841-94199860 | None:intergenic | 45.0% | |
| ! | TGCTGTAACTGCTGCTTCTA+AGG | + | chr3_1:94199945-94199964 | Msa0389410:CDS | 45.0% |
| GGCAATTGCAGAATCTAAGG+AGG | + | chr3_1:94199966-94199985 | Msa0389410:CDS | 45.0% | |
| ! | GGGGGATCTAGATTGGTAAT+GGG | + | chr3_1:94200051-94200070 | Msa0389410:CDS | 45.0% |
| !! | ATTGGTAATGGGCAAGTTCC+AGG | + | chr3_1:94200062-94200081 | Msa0389410:CDS | 45.0% |
| GCTATTGTTTGTGCGACTCT+TGG | + | chr3_1:94200115-94200134 | Msa0389410:CDS | 45.0% | |
| TTGTTTGTGCGACTCTTGGT+TGG | + | chr3_1:94200119-94200138 | Msa0389410:CDS | 45.0% | |
| TGTTTGTGCGACTCTTGGTT+GGG | + | chr3_1:94200120-94200139 | Msa0389410:CDS | 45.0% | |
| !! | TAAATTATAATTGTTTAAAT+TGG | - | chr3_1:94197489-94197508 | None:intergenic | 5.0% |
| CTGAAGGTTAGCGACAATGG+CGG | + | chr3_1:94195214-94195233 | Msa0389410:exon | 50.0% | |
| TGCAATGACTGCTCTCGATC+AGG | + | chr3_1:94195365-94195384 | Msa0389410:CDS | 50.0% | |
| GCAATGACTGCTCTCGATCA+GGG | + | chr3_1:94195366-94195385 | Msa0389410:CDS | 50.0% | |
| TACCCGTATCTGCGTGTTTC+TGG | + | chr3_1:94195428-94195447 | Msa0389410:intron | 50.0% | |
| AAACGTCTTCAACCTGGGTC+TGG | - | chr3_1:94195910-94195929 | None:intergenic | 50.0% | |
| TTACCTGTCTGCCATCAGGA+TGG | - | chr3_1:94196111-94196130 | None:intergenic | 50.0% | |
| CAACTCCGAATACAAGGCAG+TGG | - | chr3_1:94196192-94196211 | None:intergenic | 50.0% | |
| CACTGCCTTGTATTCGGAGT+TGG | + | chr3_1:94196190-94196209 | Msa0389410:intron | 50.0% | |
| TTACATTCTGGTGGGGTACG+TGG | + | chr3_1:94196500-94196519 | Msa0389410:intron | 50.0% | |
| TCATCATCGGTCCTTCGAAC+TGG | - | chr3_1:94196911-94196930 | None:intergenic | 50.0% | |
| ! | AGCAAGAGCAGGCCAAGTTT+TGG | + | chr3_1:94196993-94197012 | Msa0389410:CDS | 50.0% |
| GCAGCATCCTGCACTAGTTA+AGG | + | chr3_1:94197018-94197037 | Msa0389410:CDS | 50.0% | |
| ! | CCTTCATTAGCTCTTCGAGC+AGG | - | chr3_1:94197262-94197281 | None:intergenic | 50.0% |
| CCTGCTCGAAGAGCTAATGA+AGG | + | chr3_1:94197259-94197278 | Msa0389410:CDS | 50.0% | |
| AACAGGCTGAACTGCACTTG+CGG | + | chr3_1:94197899-94197918 | Msa0389410:intron | 50.0% | |
| CGGTAAGCCATTCTTGTGTG+TGG | + | chr3_1:94197919-94197938 | Msa0389410:intron | 50.0% | |
| TCACCACAACCCTTAGCTAG+GGG | - | chr3_1:94198410-94198429 | None:intergenic | 50.0% | |
| GTTGTGGTGATACCCTGATC+TGG | + | chr3_1:94198420-94198439 | Msa0389410:intron | 50.0% | |
| GTGATACCCTGATCTGGGAA+CGG | + | chr3_1:94198426-94198445 | Msa0389410:intron | 50.0% | |
| TTTGCACCGTTCCCAGATCA+GGG | - | chr3_1:94198435-94198454 | None:intergenic | 50.0% | |
| ATTTGCACCGTTCCCAGATC+AGG | - | chr3_1:94198436-94198455 | None:intergenic | 50.0% | |
| AGTGCTAGAAAGACTACCGG+TGG | + | chr3_1:94199081-94199100 | Msa0389410:CDS | 50.0% | |
| AATGCCTTCAGGTGATCCAC+CGG | - | chr3_1:94199100-94199119 | None:intergenic | 50.0% | |
| ATATGGGGCAGCTGCAGAAA+TGG | - | chr3_1:94199126-94199145 | None:intergenic | 50.0% | |
| TGTTAAGAAGGTGGCCCGTA+AGG | + | chr3_1:94199158-94199177 | Msa0389410:CDS | 50.0% | |
| ! | AAGGGGTAATGGCCTGATTG+CGG | + | chr3_1:94199801-94199820 | Msa0389410:CDS | 50.0% |
| ! | AAATGGGTAGTGAGGGGCAT+GGG | - | chr3_1:94199833-94199852 | None:intergenic | 50.0% |
| CCCTCACTACCCATTTCACA+AGG | + | chr3_1:94199837-94199856 | Msa0389410:CDS | 50.0% | |
| GCAGAATCTAAGGAGGGTTC+CGG | + | chr3_1:94199973-94199992 | Msa0389410:CDS | 50.0% | |
| ! | ACTGCCTTACTGGTCTCCTT+CGG | - | chr3_1:94200006-94200025 | None:intergenic | 50.0% |
| CTTCACCTTCTCCACTGCTT+CGG | - | chr3_1:94200031-94200050 | None:intergenic | 50.0% | |
| GAAGCAGTGGAGAAGGTGAA+GGG | + | chr3_1:94200030-94200049 | Msa0389410:CDS | 50.0% | |
| AAGCAGTGGAGAAGGTGAAG+GGG | + | chr3_1:94200031-94200050 | Msa0389410:CDS | 50.0% | |
| GGGGGGATCTAGATTGGTAA+TGG | + | chr3_1:94200050-94200069 | Msa0389410:CDS | 50.0% | |
| !!! | GCTGCTGTTTTGGCTGATGA+GGG | + | chr3_1:94200204-94200223 | Msa0389410:CDS | 50.0% |
| TGATGAGGGACCTATCATGG+AGG | + | chr3_1:94200218-94200237 | Msa0389410:CDS | 50.0% | |
| TCGACTCCATCCTCCATGAT+AGG | - | chr3_1:94200231-94200250 | None:intergenic | 50.0% | |
| TATCATGGAGGATGGAGTCG+AGG | + | chr3_1:94200230-94200249 | Msa0389410:CDS | 50.0% | |
| GGATGAGGACAATGAGGATG+AGG | + | chr3_1:94200254-94200273 | Msa0389410:CDS | 50.0% | |
| GTTAGCGACAATGGCGGCTT+CGG | + | chr3_1:94195220-94195239 | Msa0389410:exon | 55.0% | |
| ATTTCAGACTCTGCTGCGCC+AGG | - | chr3_1:94195838-94195857 | None:intergenic | 55.0% | |
| GTGGGCCACTGCCTTGTATT+CGG | + | chr3_1:94196184-94196203 | Msa0389410:intron | 55.0% | |
| TGAAGCCTTCTTTGGCCCCT+AGG | + | chr3_1:94196734-94196753 | Msa0389410:CDS | 55.0% | |
| ! | ATTAGCTCTTCGAGCAGGCG+AGG | - | chr3_1:94197257-94197276 | None:intergenic | 55.0% |
| TCACTGCATGTACCCATGCC+TGG | + | chr3_1:94197461-94197480 | Msa0389410:intron | 55.0% | |
| CACGGAATGCTCAGGGACAT+GGG | + | chr3_1:94198210-94198229 | Msa0389410:CDS | 55.0% | |
| ATCCTTAGCCCCCCTAGCTA+AGG | + | chr3_1:94198397-94198416 | Msa0389410:intron | 55.0% | |
| TCCTTAGCCCCCCTAGCTAA+GGG | + | chr3_1:94198398-94198417 | Msa0389410:intron | 55.0% | |
| ACCACAACCCTTAGCTAGGG+GGG | - | chr3_1:94198408-94198427 | None:intergenic | 55.0% | |
| CACCACAACCCTTAGCTAGG+GGG | - | chr3_1:94198409-94198428 | None:intergenic | 55.0% | |
| AGAGGAACAGCCTGCATAGG+AGG | - | chr3_1:94199060-94199079 | None:intergenic | 55.0% | |
| CTGAGAGGAACAGCCTGCAT+AGG | - | chr3_1:94199063-94199082 | None:intergenic | 55.0% | |
| ACTACCGGTGGATCACCTGA+AGG | + | chr3_1:94199093-94199112 | Msa0389410:CDS | 55.0% | |
| GTAGCTAGCTAGCTACTCGG+TGG | + | chr3_1:94199328-94199347 | Msa0389410:intron | 55.0% | |
| GCCATCAGTCACAACGCTGT+GGG | - | chr3_1:94199443-94199462 | None:intergenic | 55.0% | |
| AGCCATCAGTCACAACGCTG+TGG | - | chr3_1:94199444-94199463 | None:intergenic | 55.0% | |
| GATCCCATGCTCACGACTGT+CGG | + | chr3_1:94199524-94199543 | Msa0389410:intron | 55.0% | |
| CTTCCGACAGTCGTGAGCAT+GGG | - | chr3_1:94199530-94199549 | None:intergenic | 55.0% | |
| ACTTCCGACAGTCGTGAGCA+TGG | - | chr3_1:94199531-94199550 | None:intergenic | 55.0% | |
| TGCTCACGACTGTCGGAAGT+TGG | + | chr3_1:94199531-94199550 | Msa0389410:intron | 55.0% | |
| ! | AATGGGTAGTGAGGGGCATG+GGG | - | chr3_1:94199832-94199851 | None:intergenic | 55.0% |
| GAAATGGGTAGTGAGGGGCA+TGG | - | chr3_1:94199834-94199853 | None:intergenic | 55.0% | |
| AAGCCCGAAGGAGACCAGTA+AGG | + | chr3_1:94199999-94200018 | Msa0389410:CDS | 55.0% | |
| ! | CTGCCTTACTGGTCTCCTTC+GGG | - | chr3_1:94200005-94200024 | None:intergenic | 55.0% |
| TGCTTCGGCAACTGCCTTAC+TGG | - | chr3_1:94200016-94200035 | None:intergenic | 55.0% | |
| TAAGGCAGTTGCCGAAGCAG+TGG | + | chr3_1:94200017-94200036 | Msa0389410:CDS | 55.0% | |
| AGTTGCCGAAGCAGTGGAGA+AGG | + | chr3_1:94200023-94200042 | Msa0389410:CDS | 55.0% | |
| CGAAGCAGTGGAGAAGGTGA+AGG | + | chr3_1:94200029-94200048 | Msa0389410:CDS | 55.0% | |
| AGCAGTGGAGAAGGTGAAGG+GGG | + | chr3_1:94200032-94200051 | Msa0389410:CDS | 55.0% | |
| GGTGAAGGGGGGATCTAGAT+TGG | + | chr3_1:94200044-94200063 | Msa0389410:CDS | 55.0% | |
| AAGTTCCAGGCCCCATCAGA+GGG | + | chr3_1:94200075-94200094 | Msa0389410:CDS | 55.0% | |
| ACTCTTGGTTGGGCTGTGAC+AGG | + | chr3_1:94200130-94200149 | Msa0389410:CDS | 55.0% | |
| !!! | GTTTTGAAACGAACCCGGGC+TGG | + | chr3_1:94200174-94200193 | Msa0389410:CDS | 55.0% |
| !! | TGGCACTAGGGCTGCTGTTT+TGG | + | chr3_1:94200194-94200213 | Msa0389410:CDS | 55.0% |
| !!! | GGCTGCTGTTTTGGCTGATG+AGG | + | chr3_1:94200203-94200222 | Msa0389410:CDS | 55.0% |
| GGCTGATGAGGGACCTATCA+TGG | + | chr3_1:94200215-94200234 | Msa0389410:CDS | 55.0% | |
| GAGGGACCTATCATGGAGGA+TGG | + | chr3_1:94200222-94200241 | Msa0389410:CDS | 55.0% | |
| CGAGGAGGATGAGGACAATG+AGG | + | chr3_1:94200248-94200267 | Msa0389410:CDS | 55.0% | |
| GGCGAAGCAGCTGAAAGTTC+TGG | + | chr3_1:94200378-94200397 | Msa0389410:CDS | 55.0% | |
| TGGCCATCCTGATGGCAGAC+AGG | + | chr3_1:94196105-94196124 | Msa0389410:CDS | 60.0% | |
| CCATGTCCCTGAGCATTCCG+TGG | - | chr3_1:94198212-94198231 | None:intergenic | 60.0% | |
| CCACGGAATGCTCAGGGACA+TGG | + | chr3_1:94198209-94198228 | Msa0389410:CDS | 60.0% | |
| GGAATGCTCAGGGACATGGG+TGG | + | chr3_1:94198213-94198232 | Msa0389410:CDS | 60.0% | |
| AGCTCAACCACACCGATCGC+AGG | - | chr3_1:94198245-94198264 | None:intergenic | 60.0% | |
| ACCCTTAGCTAGGGGGGCTA+AGG | - | chr3_1:94198402-94198421 | None:intergenic | 60.0% | |
| GCCCACAGCGTTGTGACTGA+TGG | + | chr3_1:94199439-94199458 | Msa0389410:intron | 60.0% | |
| ! | GTAGTGAGGGGCATGGGGAA+GGG | - | chr3_1:94199827-94199846 | None:intergenic | 60.0% |
| GCAGTGGAGAAGGTGAAGGG+GGG | + | chr3_1:94200033-94200052 | Msa0389410:CDS | 60.0% | |
| CAAGTTCCAGGCCCCATCAG+AGG | + | chr3_1:94200074-94200093 | Msa0389410:CDS | 60.0% | |
| AGTTACCCTCTGATGGGGCC+TGG | - | chr3_1:94200083-94200102 | None:intergenic | 60.0% | |
| CATGGAGGATGGAGTCGAGG+AGG | + | chr3_1:94200233-94200252 | Msa0389410:CDS | 60.0% | |
| GGATGGAGTCGAGGAGGATG+AGG | + | chr3_1:94200239-94200258 | Msa0389410:CDS | 60.0% | |
| AGCGACAATGGCGGCTTCGG+AGG | + | chr3_1:94195223-94195242 | Msa0389410:exon | 65.0% | |
| GGGTGGCTGAGACCTGCGAT+CGG | + | chr3_1:94198230-94198249 | Msa0389410:CDS | 65.0% | |
| GCTGAGACCTGCGATCGGTG+TGG | + | chr3_1:94198235-94198254 | Msa0389410:CDS | 65.0% | |
| GCCCCCCTAGCTAAGGGTTG+TGG | + | chr3_1:94198404-94198423 | Msa0389410:intron | 65.0% | |
| CATGGGGAAGGGCCGCAATC+AGG | - | chr3_1:94199816-94199835 | None:intergenic | 65.0% | |
| ! | GGTAGTGAGGGGCATGGGGA+AGG | - | chr3_1:94199828-94199847 | None:intergenic | 65.0% |
| ! | GGTCTCCTTCGGGCTTGCTC+CGG | - | chr3_1:94199995-94200014 | None:intergenic | 65.0% |
| !! | AACGAACCCGGGCTGGCACT+AGG | + | chr3_1:94200181-94200200 | Msa0389410:CDS | 65.0% |
| !! | ACGAACCCGGGCTGGCACTA+GGG | + | chr3_1:94200182-94200201 | Msa0389410:CDS | 65.0% |
| GGGTTCCGGAGCAAGCCCGA+AGG | + | chr3_1:94199987-94200006 | Msa0389410:CDS | 70.0% | |
| AGCAGCCCTAGTGCCAGCCC+GGG | - | chr3_1:94200190-94200209 | None:intergenic | 70.0% | |
| CAGCAGCCCTAGTGCCAGCC+CGG | - | chr3_1:94200191-94200210 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 94194498 | 94200723 | 94194498 | ID=Msa0389410;Name=Msa0389410 |
| chr3_1 | mRNA | 94194498 | 94200723 | 94194498 | ID=Msa0389410-mRNA-1;Parent=Msa0389410;Name=Msa0389410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=169|1|1|1|0.9|0.81|11|307|685 |
| chr3_1 | exon | 94194498 | 94194617 | 94194498 | ID=Msa0389410-mRNA-1:exon:26710;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94195181 | 94195415 | 94195181 | ID=Msa0389410-mRNA-1:exon:26711;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94195539 | 94195634 | 94195539 | ID=Msa0389410-mRNA-1:exon:26712;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94195796 | 94195916 | 94195796 | ID=Msa0389410-mRNA-1:exon:26713;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94196020 | 94196126 | 94196020 | ID=Msa0389410-mRNA-1:exon:26714;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94196538 | 94196755 | 94196538 | ID=Msa0389410-mRNA-1:exon:26715;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94196862 | 94197039 | 94196862 | ID=Msa0389410-mRNA-1:exon:26716;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94197161 | 94197280 | 94197161 | ID=Msa0389410-mRNA-1:exon:26717;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94198197 | 94198283 | 94198197 | ID=Msa0389410-mRNA-1:exon:26718;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94199069 | 94199179 | 94199069 | ID=Msa0389410-mRNA-1:exon:26719;Parent=Msa0389410-mRNA-1 |
| chr3_1 | exon | 94199583 | 94200723 | 94199583 | ID=Msa0389410-mRNA-1:exon:26720;Parent=Msa0389410-mRNA-1 |
| chr3_1 | five_prime_UTR | 94194498 | 94194617 | 94194498 | ID=Msa0389410-mRNA-1:five_prime_utr;Parent=Msa0389410-mRNA-1 |
| chr3_1 | five_prime_UTR | 94195181 | 94195229 | 94195181 | ID=Msa0389410-mRNA-1:five_prime_utr;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94195230 | 94195415 | 94195230 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94195539 | 94195634 | 94195539 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94195796 | 94195916 | 94195796 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94196020 | 94196126 | 94196020 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94196538 | 94196755 | 94196538 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94196862 | 94197039 | 94196862 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94197161 | 94197280 | 94197161 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94198197 | 94198283 | 94198197 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94199069 | 94199179 | 94199069 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | CDS | 94199583 | 94200416 | 94199583 | ID=Msa0389410-mRNA-1:cds;Parent=Msa0389410-mRNA-1 |
| chr3_1 | three_prime_UTR | 94200417 | 94200723 | 94200417 | ID=Msa0389410-mRNA-1:three_prime_utr;Parent=Msa0389410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
