AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0130720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130720 MtrunA17_Chr1g0199131 95.604 273 12 0 198 470 109 381 0.0 562
Msa0130720 MtrunA17_Chr1g0199071 99.020 204 2 0 1 204 1 204 1.21e-146 418
Msa0130720 MtrunA17_Chr4g0035551 54.114 316 130 8 153 459 51 360 1.02e-113 339
Msa0130720 MtrunA17_Chr1g0155781 62.185 238 90 0 222 459 127 364 1.91e-112 336
Msa0130720 MtrunA17_Chr1g0163031 71.921 203 55 2 1 202 1 202 1.18e-99 298
Msa0130720 MtrunA17_Chr4g0036281 46.850 254 99 5 207 459 110 328 1.58e-74 237
Msa0130720 MtrunA17_Chr4g0037291 47.244 254 98 5 207 459 151 369 2.17e-74 238
Msa0130720 MtrunA17_Chr4g0036731 47.451 255 92 7 207 459 110 324 4.39e-74 236
Msa0130720 MtrunA17_Chr4g0041521 40.161 249 117 7 214 447 100 331 4.91e-52 179
Msa0130720 MtrunA17_Chr4g0041481 39.357 249 119 7 214 447 100 331 6.34e-51 176
Msa0130720 MtrunA17_Chr4g0040851 41.453 234 114 7 230 456 143 360 9.14e-51 176
Msa0130720 MtrunA17_Chr4g0060251 40.506 237 113 7 226 452 123 341 2.74e-49 172
Msa0130720 MtrunA17_Chr4g0024411 40.506 237 113 7 226 452 121 339 3.11e-49 171
Msa0130720 MtrunA17_Chr4g0040881 42.105 228 104 7 230 447 127 336 3.59e-49 171
Msa0130720 MtrunA17_Chr4g0041061 42.105 228 104 7 230 447 127 336 5.07e-49 171
Msa0130720 MtrunA17_Chr5g0405751 40.506 237 113 7 226 452 122 340 9.84e-49 170
Msa0130720 MtrunA17_Chr0c27g0493921 41.810 232 117 5 230 457 133 350 1.47e-48 170
Msa0130720 MtrunA17_Chr2g0283671 40.083 242 120 9 222 456 5 228 7.12e-48 164
Msa0130720 MtrunA17_Chr4g0058081 41.485 229 110 7 226 447 124 335 1.20e-47 168
Msa0130720 MtrunA17_Chr4g0053311 39.914 233 111 7 230 452 125 338 1.40e-47 167
Msa0130720 MtrunA17_Chr3g0144281 39.062 256 130 7 205 452 107 344 1.59e-47 167
Msa0130720 MtrunA17_Chr4g0070441 41.150 226 115 5 230 451 133 344 3.61e-47 166
Msa0130720 MtrunA17_Chr4g0041081 39.485 233 113 7 230 452 127 341 4.38e-47 166
Msa0130720 MtrunA17_Chr8g0379151 37.405 262 138 6 198 451 125 368 5.09e-47 167
Msa0130720 MtrunA17_Chr3g0116551 40.179 224 111 7 231 447 129 336 2.00e-46 164
Msa0130720 MtrunA17_Chr2g0325121 40.789 228 106 7 230 447 120 328 3.75e-46 163
Msa0130720 MtrunA17_Chr1g0208261 40.435 230 112 7 226 447 175 387 4.14e-45 164
Msa0130720 MtrunA17_Chr2g0283901 38.961 231 114 8 231 452 140 352 1.89e-44 162
Msa0130720 MtrunA17_Chr2g0319991 37.759 241 122 7 226 456 122 344 4.75e-44 157
Msa0130720 MtrunA17_Chr2g0315491 38.793 232 114 6 226 447 119 332 4.86e-44 157
Msa0130720 MtrunA17_Chr3g0142071 39.827 231 113 8 230 452 140 352 1.23e-43 159
Msa0130720 MtrunA17_Chr7g0248391 37.131 237 126 7 226 456 119 338 2.91e-43 155
Msa0130720 MtrunA17_Chr1g0153011 40.708 226 109 6 230 447 126 334 3.58e-43 158
Msa0130720 MtrunA17_Chr4g0041471 39.224 232 116 9 226 449 121 335 4.45e-43 155
Msa0130720 MtrunA17_Chr7g0248811 37.118 229 119 7 226 447 117 327 6.47e-42 152
Msa0130720 MtrunA17_Chr3g0134231 36.797 231 115 7 228 447 143 353 7.54e-42 155
Msa0130720 MtrunA17_Chr1g0156161 39.286 224 114 8 227 446 46 251 5.79e-38 139
Msa0130720 MtrunA17_Chr2g0283741 34.632 231 119 8 231 449 142 352 8.06e-37 139
Msa0130720 MtrunA17_Chr8g0379671 45.522 134 59 2 271 404 23 142 2.32e-35 129
Msa0130720 MtrunA17_Chr2g0311471 36.364 231 121 7 230 452 130 342 1.27e-34 132
Msa0130720 MtrunA17_Chr2g0311381 35.081 248 127 11 218 452 120 346 1.20e-31 124
Msa0130720 MtrunA17_Chr2g0311391 34.298 242 127 9 229 462 154 371 4.07e-30 120
Msa0130720 MtrunA17_Chr2g0283751 45.283 106 46 2 231 335 144 238 1.76e-23 100
Msa0130720 MtrunA17_Chr1g0156771 39.655 116 58 3 225 337 50 156 1.04e-20 89.0
Msa0130720 MtrunA17_Chr7g0248421 35.714 154 83 5 254 404 57 197 2.42e-19 86.3
Msa0130720 MtrunA17_Chr2g0321111 34.752 141 86 2 68 202 450 590 3.53e-19 90.5
Msa0130720 MtrunA17_Chr7g0266721 34.375 128 78 2 83 204 13 140 1.60e-18 82.8
Msa0130720 MtrunA17_Chr8g0351571 35.156 128 75 3 82 202 3 129 2.01e-15 73.9
Msa0130720 MtrunA17_Chr7g0271031 28.175 252 139 10 230 455 147 382 4.92e-15 76.6
Msa0130720 MtrunA17_Chr5g0401141 35.714 126 71 3 80 197 345 468 3.62e-13 71.6
Msa0130720 MtrunA17_Chr2g0311091 54.902 51 23 0 230 280 134 184 5.33e-12 64.7
Msa0130720 MtrunA17_Chr4g0045321 36.842 133 65 7 88 202 17 148 4.79e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130720 AT3G54940.2 74.319 257 65 1 198 453 104 360 3.46e-142 412
Msa0130720 AT2G21430.1 56.934 274 113 4 182 454 87 356 7.39e-112 335
Msa0130720 AT4G39090.1 56.940 281 114 5 182 459 90 366 2.07e-111 333
Msa0130720 AT4G16190.1 61.066 244 92 3 220 461 130 372 1.39e-103 314
Msa0130720 AT3G54940.3 70.520 173 50 1 198 369 104 276 1.87e-83 259
Msa0130720 AT3G66654.4 57.143 210 84 3 1 204 1 210 1.73e-73 231
Msa0130720 AT3G66654.2 57.143 210 84 3 1 204 1 210 1.73e-73 231
Msa0130720 AT3G66654.3 57.143 210 84 3 1 204 1 210 1.73e-73 231
Msa0130720 AT3G66654.1 57.143 210 84 3 1 204 1 210 1.73e-73 231
Msa0130720 AT3G66654.5 57.143 210 84 3 1 204 1 210 1.73e-73 231
Msa0130720 AT2G47320.1 52.941 204 92 3 1 202 1 202 4.00e-64 207
Msa0130720 AT1G20850.1 42.194 237 107 7 226 452 134 350 2.75e-52 180
Msa0130720 AT5G60360.1 44.206 233 110 5 230 457 141 358 3.76e-51 177
Msa0130720 AT4G35350.1 40.171 234 116 6 226 452 133 349 4.92e-50 174
Msa0130720 AT3G45310.1 43.162 234 111 6 230 457 141 358 1.40e-49 173
Msa0130720 AT5G60360.2 43.777 233 110 6 230 457 141 357 1.35e-48 171
Msa0130720 AT5G60360.3 44.595 222 103 5 230 446 141 347 1.48e-48 171
Msa0130720 AT5G43060.1 40.969 227 110 6 228 447 136 345 2.97e-48 172
Msa0130720 AT5G45890.1 38.403 263 129 8 199 447 94 337 3.43e-48 169
Msa0130720 AT3G48340.1 43.668 229 97 9 230 447 128 335 4.27e-48 169
Msa0130720 AT1G29090.1 39.689 257 123 10 205 447 108 346 1.07e-47 168
Msa0130720 AT1G06260.1 42.083 240 110 9 223 452 119 339 1.91e-47 167
Msa0130720 AT1G47128.1 40.789 228 105 7 230 447 137 344 2.37e-47 170
Msa0130720 AT3G45310.2 43.243 222 104 6 230 445 141 346 3.41e-47 167
Msa0130720 AT4G36880.1 34.028 288 142 8 193 469 125 375 3.48e-47 167
Msa0130720 AT5G50260.1 41.485 229 111 6 226 447 122 334 1.33e-46 165
Msa0130720 AT3G19390.1 41.772 237 105 10 228 452 127 342 2.11e-46 167
Msa0130720 AT3G19400.1 39.149 235 112 8 230 452 130 345 1.23e-45 163
Msa0130720 AT4G23520.1 37.395 238 122 8 224 452 127 346 7.96e-45 160
Msa0130720 AT2G34080.1 40.179 224 107 8 232 447 132 336 2.76e-44 159
Msa0130720 AT1G09850.1 39.827 231 113 8 230 452 118 330 5.47e-44 160
Msa0130720 AT1G29080.1 38.824 255 127 10 205 447 100 337 1.43e-43 157
Msa0130720 AT3G48350.1 37.349 249 132 7 226 466 122 354 4.36e-43 156
Msa0130720 AT4G11320.2 38.696 230 115 7 226 447 140 351 2.56e-42 154
Msa0130720 AT4G11320.1 38.696 230 115 7 226 447 140 351 2.56e-42 154
Msa0130720 AT4G11310.1 37.991 229 110 7 230 447 137 344 3.82e-42 154
Msa0130720 AT3G49340.1 35.808 229 115 8 232 450 129 335 4.14e-40 147
Msa0130720 AT3G43960.1 37.805 246 135 6 199 440 96 327 1.89e-39 146
Msa0130720 AT2G27420.1 36.123 227 117 7 232 447 130 339 3.09e-39 145
Msa0130720 AT4G35350.2 42.000 150 78 2 226 374 133 274 2.44e-36 136
Msa0130720 AT3G19400.2 40.541 148 78 3 230 374 130 270 6.92e-32 124
Msa0130720 AT1G29110.1 34.934 229 113 8 226 447 126 325 1.49e-31 124
Msa0130720 AT3G48350.2 40.397 151 80 3 226 374 122 264 3.26e-29 116
Msa0130720 AT3G44600.1 35.461 141 85 2 68 202 464 604 3.61e-19 90.9
Msa0130720 AT2G36130.1 31.818 132 84 2 79 204 9 140 4.67e-18 82.0
Msa0130720 AT1G01940.1 33.858 127 78 2 82 202 3 129 9.28e-16 75.1
Msa0130720 AT1G02305.1 27.778 252 140 10 230 455 106 341 1.45e-14 75.5
Msa0130720 AT4G01610.1 25.514 243 141 9 230 447 103 330 1.38e-13 72.4
Msa0130720 AT5G67530.1 34.921 126 72 3 80 197 344 467 4.43e-13 72.0
Msa0130720 AT4G01610.2 25.103 243 142 9 230 447 103 330 1.47e-12 69.3
Msa0130720 AT1G02300.1 26.068 234 135 9 247 458 144 361 2.04e-11 65.9
Msa0130720 AT2G21130.1 35.556 135 61 6 89 202 19 148 9.73e-11 61.2

Find 126 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATAGGATTAGGTTAAA+TGG 0.203431 1_3:+61137974 Msa0130720:exon
TGGTTTGTGACTCTTGATTT+TGG 0.240540 1_3:+61137930 Msa0130720:five_prime_UTR
AATAAAGATTTGGATGATAT+TGG 0.270232 1_3:+61137847 Msa0130720:five_prime_UTR
TAACTAAATAAGCAGCAATT+TGG 0.276229 1_3:-61142857 None:intergenic
TTGTAGGTTGAAAATAGTTT+TGG 0.284508 1_3:+61139414 Msa0130720:intron
AATGAGAAGCTTATTGTGTT+TGG 0.290264 1_3:+61141284 Msa0130720:CDS
CACAAGGTTTCTCGATTCTT+AGG 0.295720 1_3:+61143225 Msa0130720:CDS
TGGGAATTTATGATAGGATT+AGG 0.314780 1_3:+61137966 Msa0130720:five_prime_UTR
GCTTGAGGCTGGTGGATTAG+AGG 0.315848 1_3:+61142728 Msa0130720:CDS
CTACGCTTTGATTCTTGTCT+TGG 0.316133 1_3:+61138079 Msa0130720:CDS
TATTAAGCACTATGTGATTC+AGG 0.332742 1_3:+61141008 Msa0130720:CDS
GAATTCTTGATGATCCAATA+TGG 0.338546 1_3:-61143260 None:intergenic
AGCCTCAAGCAAATAATTAT+AGG 0.341198 1_3:-61142715 None:intergenic
TTGACGAATTTATTGACTTA+TGG 0.343573 1_3:+61139682 Msa0130720:CDS
ACTAACTGGGAATTTATGAT+AGG 0.345348 1_3:+61137960 Msa0130720:five_prime_UTR
ATAAATTCGTCAACAGCTTC+AGG 0.351785 1_3:-61139672 None:intergenic
CATACAGACATTGGTCTAAC+AGG 0.351889 1_3:+61138123 Msa0130720:CDS
AACAGAACTAGGTAGCTAAT+AGG 0.375008 1_3:-61143414 None:intergenic
TGATTTGTCTGCAGTCAAAA+AGG 0.376652 1_3:+61140955 Msa0130720:intron
CAAGGGAGAGGATGTTGTTC+AGG 0.390816 1_3:+61141316 Msa0130720:CDS
TGGCGAGGTTGCACCGCCCT+TGG 0.393236 1_3:+61141818 Msa0130720:CDS
AAAGAATAAGAAAACCTTGC+AGG 0.393868 1_3:-61141084 None:intergenic
GATAAGACATCATGTGATAA+TGG 0.394339 1_3:+61142666 Msa0130720:CDS
GGCTTCGCAAGAAACCATAT+TGG 0.397056 1_3:+61143246 Msa0130720:CDS
GCAGGGGATGGTCAAGGAAC+AGG 0.397526 1_3:+61141030 Msa0130720:CDS
TAGGTCTTAAATACATCTAA+AGG 0.399050 1_3:+61139615 Msa0130720:intron
TATAATTATTTGCTTGAGGC+TGG 0.400349 1_3:+61142717 Msa0130720:CDS
TTTGTTGGTGTGTTTGCCCT+TGG 0.409985 1_3:-61141219 None:intergenic
GCTTTGATTCTTGTCTTGGT+TGG 0.410038 1_3:+61138083 Msa0130720:CDS
GTTCTCATCCACAGGTAGAT+TGG 0.415931 1_3:-61142835 None:intergenic
AGGGTAAATGTGGATCTTGC+TGG 0.419704 1_3:+61142309 Msa0130720:intron
ATTCTCTTGCTACATATAAG+AGG 0.422987 1_3:-61143167 None:intergenic
ATAAGCTTCTCATTTAGATC+TGG 0.424089 1_3:-61141275 None:intergenic
GGTTGCACCGCCCTTGGATG+TGG 0.428740 1_3:+61141824 Msa0130720:CDS
CTTGGATGTGGAAGGATTGC+CGG 0.431739 1_3:+61141836 Msa0130720:CDS
TGCTGGGCTTTCAGCACTAC+AGG 0.442971 1_3:+61142326 Msa0130720:CDS
ATACCCGTACACTGGTGGTA+AGG 0.455502 1_3:+61142761 Msa0130720:CDS
AAGGAACAGGAGCAGCTGAT+TGG 0.463623 1_3:+61141043 Msa0130720:CDS
AGCACTACAGGATCTATAGA+AGG 0.470148 1_3:+61142338 Msa0130720:CDS
GAAAAGATCAAATCCTTTGT+TGG 0.478754 1_3:-61141234 None:intergenic
TTCTCATTTAGATCTGGAAT+CGG 0.478846 1_3:-61141269 None:intergenic
GAATTTCGATTGGAGGGAGA+AGG 0.483095 1_3:+61141860 Msa0130720:CDS
AGGTCTTAAATACATCTAAA+GGG 0.486599 1_3:+61139616 Msa0130720:intron
CTCTGTTACAACAAAGCAAA+AGG 0.489993 1_3:+61138015 Msa0130720:CDS
GCAGCTGATTGGAACTTAAG+AGG 0.490971 1_3:+61141054 Msa0130720:CDS
AATTTCGATTGGAGGGAGAA+GGG 0.491914 1_3:+61141861 Msa0130720:CDS
AAAGGAAGAAGGGACCTTCT+CGG 0.493022 1_3:+61138033 Msa0130720:CDS
TCATGTGATAATGGTTGTAA+TGG 0.500611 1_3:+61142675 Msa0130720:CDS
TGCCGGAGAATTTCGATTGG+AGG 0.504986 1_3:+61141853 Msa0130720:CDS
TCCCTCCAATCGAAATTCTC+CGG 0.505325 1_3:-61141855 None:intergenic
GCCGGAGAATTTCGATTGGA+GGG 0.506193 1_3:+61141854 Msa0130720:CDS
CGGCAATCCTTCCACATCCA+AGG 0.507533 1_3:-61141835 None:intergenic
AACCACGGTGTATTGCTTGT+GGG 0.510752 1_3:+61143194 Msa0130720:CDS
TACAAGCTTTGCAGAGGGCA+TGG 0.513945 1_3:+61143314 Msa0130720:CDS
AATTATTTGCTTGAGGCTGG+TGG 0.514952 1_3:+61142720 Msa0130720:CDS
GCAATTTGGTTCTCATCCAC+AGG 0.515183 1_3:-61142843 None:intergenic
TTCTATACCGGTGTTAGAGG+TGG 0.515332 1_3:+61141774 Msa0130720:CDS
TGCCTATAATTATTTGCTTG+AGG 0.515816 1_3:+61142713 Msa0130720:CDS
GGTGGATTCCCCTCGAGAAA+CGG 0.519839 1_3:+61141792 Msa0130720:CDS
ACAACAAAGCAAAAGGAAGA+AGG 0.520495 1_3:+61138022 Msa0130720:CDS
GATTGCCGGAGAATTTCGAT+TGG 0.521822 1_3:+61141850 Msa0130720:CDS
TTCATGCAAACTTACATTGG+TGG 0.523262 1_3:+61143134 Msa0130720:CDS
AATGTCTGTATGTAGCCAAA+AGG 0.524194 1_3:-61138112 None:intergenic
AAGCACTATGTGATTCAGGC+AGG 0.525167 1_3:+61141012 Msa0130720:CDS
TCACCCTTACCACCAGTGTA+CGG 0.527618 1_3:-61142765 None:intergenic
CACCCTTACCACCAGTGTAC+GGG 0.533213 1_3:-61142764 None:intergenic
TCGAAGAAATCTGAGCTACC+TGG 0.535071 1_3:+61139441 Msa0130720:CDS
CTTTGTTGTAACAGAGCCTG+AGG 0.536853 1_3:-61138008 None:intergenic
AATGGCTAGGATCAAACCTC+AGG 0.537124 1_3:+61137992 Msa0130720:exon
AAACATGAAGCATTCATGCT+TGG 0.537837 1_3:+61141191 Msa0130720:CDS
GCTGCTTATTTAGTTAATCA+CGG 0.543083 1_3:+61142864 Msa0130720:CDS
ATGAAACTTACAGCATATCC+AGG 0.544358 1_3:-61139459 None:intergenic
GGCAATCCTTCCACATCCAA+GGG 0.544410 1_3:-61141834 None:intergenic
CACAATGGTTTCTGCTGCAA+TGG 0.544762 1_3:+61143352 Msa0130720:CDS
AATGGTTTCTGCTGCAATGG+TGG 0.547337 1_3:+61143355 Msa0130720:CDS
GAACCACGGTGTATTGCTTG+TGG 0.550119 1_3:+61143193 Msa0130720:CDS
CTTGTGGGTTATAATGCACA+AGG 0.551826 1_3:+61143209 Msa0130720:CDS
GCACTATGTGATTCAGGCAG+GGG 0.552477 1_3:+61141014 Msa0130720:CDS
ATTTCGATTGGAGGGAGAAG+GGG 0.553540 1_3:+61141862 Msa0130720:CDS
GCACCGCCCTTGGATGTGGA+AGG 0.555789 1_3:+61141828 Msa0130720:CDS
GGGTAAATGTGGATCTTGCT+GGG 0.557750 1_3:+61142310 Msa0130720:intron
GTGTTTGGACAAGTCGTCAA+GGG 0.558972 1_3:+61141299 Msa0130720:CDS
TGGACAAGTCGTCAAGGGAG+AGG 0.559232 1_3:+61141304 Msa0130720:CDS
CGCCAACTCCGTTTCTCGAG+GGG 0.564041 1_3:-61141800 None:intergenic
TTTCGATTGGAGGGAGAAGG+GGG 0.564832 1_3:+61141863 Msa0130720:CDS
TAGGATTAGGTTAAATGGCT+AGG 0.565103 1_3:+61137979 Msa0130720:exon
TAAGGGGACTTACTTGCAAG+TGG 0.568709 1_3:-61142888 None:intergenic
CTCGCCAACTCCGTTTCTCG+AGG 0.568856 1_3:-61141802 None:intergenic
ATTCATGCTTGGAACATCCA+AGG 0.573047 1_3:+61141202 Msa0130720:CDS
TTGGATCATCAAGAATTCGT+GGG 0.578311 1_3:+61143265 Msa0130720:CDS
TACCCGTACACTGGTGGTAA+GGG 0.579815 1_3:+61142762 Msa0130720:CDS
TTCCCCTCGAGAAACGGAGT+TGG 0.586466 1_3:+61141798 Msa0130720:CDS
TTCTCTTGCTACATATAAGA+GGG 0.587349 1_3:-61143166 None:intergenic
TCGCCAACTCCGTTTCTCGA+GGG 0.588026 1_3:-61141801 None:intergenic
ATTCAGGCAGGGGATGGTCA+AGG 0.591509 1_3:+61141024 Msa0130720:CDS
CTCGAGAAACGGAGTTGGCG+AGG 0.594223 1_3:+61141803 Msa0130720:CDS
TATGTGATTCAGGCAGGGGA+TGG 0.596403 1_3:+61141018 Msa0130720:CDS
CAACAAAGCAAAAGGAAGAA+GGG 0.596730 1_3:+61138023 Msa0130720:CDS
TTCATGCTTGGAACATCCAA+GGG 0.601739 1_3:+61141203 Msa0130720:CDS
TATAATAGTAGAACTGTACA+AGG 0.602132 1_3:+61139641 Msa0130720:CDS
AGCACTATGTGATTCAGGCA+GGG 0.602224 1_3:+61141013 Msa0130720:CDS
ATTGGATCATCAAGAATTCG+TGG 0.604812 1_3:+61143264 Msa0130720:CDS
AAATAACTTGTCAGTCTCTG+AGG 0.605740 1_3:+61139168 Msa0130720:CDS
AAGGGCAAACACACCAACAA+AGG 0.607399 1_3:+61141221 Msa0130720:CDS
TGTTACTGGAGTCAAGATGC+AGG 0.607732 1_3:+61141887 Msa0130720:CDS
GGGGAATCCACCTCTAACAC+CGG 0.613162 1_3:-61141781 None:intergenic
TGCAGAGGGCATGGTATGTG+TGG 0.615133 1_3:+61143323 Msa0130720:CDS
TCTTAGTGAACAACAGCTTG+TGG 0.616431 1_3:+61142394 Msa0130720:CDS
TGTGTTTGGACAAGTCGTCA+AGG 0.618995 1_3:+61141298 Msa0130720:CDS
GGGTATTACAAGCTTTGCAG+AGG 0.620670 1_3:+61143308 Msa0130720:CDS
GCTTGTGGACTGTGACAGCA+AGG 0.622428 1_3:+61142409 Msa0130720:CDS
TAAGAGGAAAGCAACCTGCA+AGG 0.628079 1_3:+61141070 Msa0130720:CDS
GAAACTTCATACCCGTACAC+TGG 0.628584 1_3:+61142753 Msa0130720:CDS
GGTATTACAAGCTTTGCAGA+GGG 0.636304 1_3:+61143309 Msa0130720:CDS
TGTGATAATGGTTGTAATGG+AGG 0.643668 1_3:+61142678 Msa0130720:CDS
TGAGGCTGGTGGATTAGAGG+AGG 0.654720 1_3:+61142731 Msa0130720:CDS
ACTTCATACCCGTACACTGG+TGG 0.657388 1_3:+61142756 Msa0130720:CDS
CTAGCCGCGCTAATCCGAGA+AGG 0.659399 1_3:-61138047 None:intergenic
AATCCTTCCACATCCAAGGG+CGG 0.664048 1_3:-61141831 None:intergenic
TGGATCATCAAGAATTCGTG+GGG 0.675621 1_3:+61143266 Msa0130720:CDS
AAATTTCACCAATCTACCTG+TGG 0.676633 1_3:+61142827 Msa0130720:CDS
TAACTTGTCAGTCTCTGAGG+AGG 0.678198 1_3:+61139171 Msa0130720:CDS
AGCAAGAGAATGCTGAACCA+CGG 0.698635 1_3:+61143179 Msa0130720:CDS
GGGACCTTCTCGGATTAGCG+CGG 0.730312 1_3:+61138043 Msa0130720:CDS
AACCCACAAGCAATACACCG+TGG 0.800815 1_3:-61143196 None:intergenic
TATGTGTGGAATGAACACAA+TGG 0.864374 1_3:+61143337 Msa0130720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr1_3:61139958-61139977 Msa0130720:intron 0.0%
!! TAAATAAATAAATAAAAAAA+TGG + chr1_3:61142240-61142259 Msa0130720:intron 0.0%
!! ATATAATAATTTCAATTAAC+TGG - chr1_3:61139555-61139574 None:intergenic 10.0%
!! AGTTAATTGAAATTATTATA+TGG + chr1_3:61139554-61139573 Msa0130720:intron 10.0%
!!! AAATTAAACAGTTTTTATTT+AGG - chr1_3:61142283-61142302 None:intergenic 10.0%
!!! AGAGAAAATATTTTTTATGT+TGG + chr1_3:61138623-61138642 Msa0130720:intron 15.0%
!!! TTTTATGTTGGAAAATAAAA+AGG + chr1_3:61138635-61138654 Msa0130720:intron 15.0%
!! TTTATGTTGGAAAATAAAAA+GGG + chr1_3:61138636-61138655 Msa0130720:intron 15.0%
!! AAAAATGCTAAAAAATTCAA+TGG - chr1_3:61138962-61138981 None:intergenic 15.0%
!!! TCTATTTTTCTCATATAAAT+AGG + chr1_3:61139062-61139081 Msa0130720:intron 15.0%
!! AGGAGTAAAAAAAAAAAAAA+AGG - chr1_3:61139221-61139240 None:intergenic 15.0%
!!! TTATATTGATTGGAAATAAA+TGG - chr1_3:61141496-61141515 None:intergenic 15.0%
!! TATCACTTTATATGTAATTA+TGG + chr1_3:61141558-61141577 Msa0130720:intron 15.0%
!! TTTAGTAATGAATACAATAA+CGG + chr1_3:61141595-61141614 Msa0130720:intron 15.0%
!! AATGTGATATTTATAGTAAT+AGG + chr1_3:61142032-61142051 Msa0130720:intron 15.0%
!!! TTGTTTTTTTATTTACAATG+AGG + chr1_3:61142075-61142094 Msa0130720:intron 15.0%
!!! TATTTATGTTTCTAATGATT+AGG + chr1_3:61142163-61142182 Msa0130720:intron 15.0%
!! AGAACTTTGTAATTAATTAA+GGG - chr1_3:61142908-61142927 None:intergenic 15.0%
!! TAGAACTTTGTAATTAATTA+AGG - chr1_3:61142909-61142928 None:intergenic 15.0%
!! AATAAAGATTTGGATGATAT+TGG + chr1_3:61137847-61137866 Msa0130720:five_prime_UTR 20.0%
!!! TTTTGATTCAGTAGAATTTT+TGG + chr1_3:61137910-61137929 Msa0130720:five_prime_UTR 20.0%
!!! ATTTTGGTTTATTAACTAAC+TGG + chr1_3:61137946-61137965 Msa0130720:five_prime_UTR 20.0%
!!! TTTTGGTTTATTAACTAACT+GGG + chr1_3:61137947-61137966 Msa0130720:five_prime_UTR 20.0%
!!! TGAAATGCTTGATAATTTTT+GGG + chr1_3:61138305-61138324 Msa0130720:intron 20.0%
!!! TTTTATTTATAAATTGGCCA+TGG - chr1_3:61138777-61138796 None:intergenic 20.0%
!! GCCAATTTATAAATAAAACA+CGG + chr1_3:61138779-61138798 Msa0130720:intron 20.0%
!!! ACCGTGTTTTATTTATAAAT+TGG - chr1_3:61138783-61138802 None:intergenic 20.0%
!!! CTTTAAAATCATATAACTGA+TGG - chr1_3:61139011-61139030 None:intergenic 20.0%
!!! CAGTTATATGATTTTAAAGA+AGG + chr1_3:61139012-61139031 Msa0130720:intron 20.0%
!! ACCTATAATAATGAAGAAAT+AGG - chr1_3:61139600-61139619 None:intergenic 20.0%
!!! TTCCAACAAAGTTTTTAATA+TGG + chr1_3:61139718-61139737 Msa0130720:intron 20.0%
!! TTCCATATTAAAAACTTTGT+TGG - chr1_3:61139723-61139742 None:intergenic 20.0%
!! ATATATTTCAGCTAAGATTA+TGG - chr1_3:61139905-61139924 None:intergenic 20.0%
!!! ATCTTAGCTGAAATATATTT+TGG + chr1_3:61139907-61139926 Msa0130720:intron 20.0%
!! TTAGTATAAGTAAGAATACT+AGG + chr1_3:61140406-61140425 Msa0130720:intron 20.0%
!! ATTGGAAATAAATGGAAAAA+TGG - chr1_3:61141488-61141507 None:intergenic 20.0%
!! TTTCCAATCAATATAAATCA+AGG + chr1_3:61141500-61141519 Msa0130720:intron 20.0%
!! TAACCTTGATTTATATTGAT+TGG - chr1_3:61141506-61141525 None:intergenic 20.0%
!! AACTTAAATAAATTACATCC+CGG - chr1_3:61142189-61142208 None:intergenic 20.0%
!!! TTATTTAGGATAATGTTTCA+TGG - chr1_3:61142269-61142288 None:intergenic 20.0%
!!! AAACTGTTTAATTTTGAAAC+AGG + chr1_3:61142289-61142308 Msa0130720:intron 20.0%
!!! AACTGTTTAATTTTGAAACA+GGG + chr1_3:61142290-61142309 Msa0130720:intron 20.0%
!! AAGTATAGAACATAGTTAAT+TGG - chr1_3:61142487-61142506 None:intergenic 20.0%
!!! TAATCTTCTGTTTTATTAAC+TGG + chr1_3:61142597-61142616 Msa0130720:intron 20.0%
!!! ATTTTAACTGCAATTTTCTT+TGG - chr1_3:61142804-61142823 None:intergenic 20.0%
!! GAACTTTGTAATTAATTAAG+GGG - chr1_3:61142907-61142926 None:intergenic 20.0%
! TATGATAGGATTAGGTTAAA+TGG + chr1_3:61137974-61137993 Msa0130720:exon 25.0%
!!! TAAATTGAGCTTTATTGCTT+TGG + chr1_3:61138261-61138280 Msa0130720:intron 25.0%
!!! CTGAAATGCTTGATAATTTT+TGG + chr1_3:61138304-61138323 Msa0130720:intron 25.0%
! AGTGATAGAGAGATAATATA+GGG + chr1_3:61138574-61138593 Msa0130720:intron 25.0%
!! ATATTCGATTTTCTGTATTC+TGG + chr1_3:61138668-61138687 Msa0130720:intron 25.0%
!!! TTTGTTTTGCTAAAAAACAG+AGG - chr1_3:61138830-61138849 None:intergenic 25.0%
!!! ATTTTAAAGAAGGCTGTTAT+TGG + chr1_3:61139022-61139041 Msa0130720:intron 25.0%
! AAAGTAAGAAATGAATGGTT+AGG - chr1_3:61139118-61139137 None:intergenic 25.0%
! CAGTTAAAGTAAGAAATGAA+TGG - chr1_3:61139123-61139142 None:intergenic 25.0%
!! TTCTTACTTTAACTGTTTTC+AGG + chr1_3:61139128-61139147 Msa0130720:intron 25.0%
!!! TTGTAGGTTGAAAATAGTTT+TGG + chr1_3:61139414-61139433 Msa0130720:intron 25.0%
!!! TGTAGGTTGAAAATAGTTTT+GGG + chr1_3:61139415-61139434 Msa0130720:intron 25.0%
!! TGGAATTTTATCTTATTACC+TGG + chr1_3:61139574-61139593 Msa0130720:intron 25.0%
!! GCCTATTTCTTCATTATTAT+AGG + chr1_3:61139596-61139615 Msa0130720:intron 25.0%
! TAGGTCTTAAATACATCTAA+AGG + chr1_3:61139615-61139634 Msa0130720:intron 25.0%
! AGGTCTTAAATACATCTAAA+GGG + chr1_3:61139616-61139635 Msa0130720:intron 25.0%
! TATAATAGTAGAACTGTACA+AGG + chr1_3:61139641-61139660 Msa0130720:CDS 25.0%
!!! TTGACGAATTTATTGACTTA+TGG + chr1_3:61139682-61139701 Msa0130720:CDS 25.0%
!!! GTTATTTTGTGATAGACAAT+AGG + chr1_3:61139811-61139830 Msa0130720:intron 25.0%
!! AAGTGCTGTAAATATTACTT+GGG - chr1_3:61139870-61139889 None:intergenic 25.0%
!!! AAAGTGCTGTAAATATTACT+TGG - chr1_3:61139871-61139890 None:intergenic 25.0%
! TATGATGTGAAATGTTGTTA+TGG - chr1_3:61140018-61140037 None:intergenic 25.0%
!! TCATATCTTGTTTCTTTGTT+AGG + chr1_3:61140033-61140052 Msa0130720:intron 25.0%
! CAAATTTCCTTTGTCATATA+AGG + chr1_3:61140305-61140324 Msa0130720:intron 25.0%
! ATGTGTGCTATATATAAGAT+TGG - chr1_3:61140432-61140451 None:intergenic 25.0%
! GATGTATAAAACATGTTACA+CGG - chr1_3:61140546-61140565 None:intergenic 25.0%
!!! CAAATTTGTACTTTTTGATC+TGG + chr1_3:61140583-61140602 Msa0130720:intron 25.0%
! AGTAGTCTGTTCATTATAAA+TGG + chr1_3:61140883-61140902 Msa0130720:intron 25.0%
! GTAGTCTGTTCATTATAAAT+GGG + chr1_3:61140884-61140903 Msa0130720:intron 25.0%
! TAGAAAATTATACAACTCAC+TGG - chr1_3:61141140-61141159 None:intergenic 25.0%
! AATTATGCAAAAAACCTTCA+TGG - chr1_3:61141439-61141458 None:intergenic 25.0%
!!! TTTTGAAACACCAATTTTTG+TGG + chr1_3:61141532-61141551 Msa0130720:intron 25.0%
! AGTGATAAATCCACAAAAAT+TGG - chr1_3:61141545-61141564 None:intergenic 25.0%
! ACAGATGTCAAAATTAGTAT+GGG - chr1_3:61141642-61141661 None:intergenic 25.0%
! TACAGATGTCAAAATTAGTA+TGG - chr1_3:61141643-61141662 None:intergenic 25.0%
! CAAACTAGAAATTTCAAACA+TGG - chr1_3:61141961-61141980 None:intergenic 25.0%
!!! CATGTTTGAAATTTCTAGTT+TGG + chr1_3:61141959-61141978 Msa0130720:intron 25.0%
! TAACTAAATAAGCAGCAATT+TGG - chr1_3:61142860-61142879 None:intergenic 25.0%
ACTAACTGGGAATTTATGAT+AGG + chr1_3:61137960-61137979 Msa0130720:five_prime_UTR 30.0%
TGGGAATTTATGATAGGATT+AGG + chr1_3:61137966-61137985 Msa0130720:five_prime_UTR 30.0%
!! TGTCTGAAATCGTATTTTGT+TGG + chr1_3:61138353-61138372 Msa0130720:intron 30.0%
!! AATCGTATTTTGTTGGCTAA+AGG + chr1_3:61138360-61138379 Msa0130720:intron 30.0%
TGAGAGAGATCAATTGATAT+AGG - chr1_3:61138398-61138417 None:intergenic 30.0%
GAGTGATAGAGAGATAATAT+AGG + chr1_3:61138573-61138592 Msa0130720:intron 30.0%
AAGAAATGAATGGTTAGGTA+AGG - chr1_3:61139113-61139132 None:intergenic 30.0%
GATAACATGAAACTACAGAA+GGG - chr1_3:61139247-61139266 None:intergenic 30.0%
AGATAACATGAAACTACAGA+AGG - chr1_3:61139248-61139267 None:intergenic 30.0%
! GATAAAAGGGAGTATACATT+AGG - chr1_3:61139281-61139300 None:intergenic 30.0%
! GTATACTCCCTTTTATCTAA+AGG + chr1_3:61139284-61139303 Msa0130720:intron 30.0%
TAGAAGGCCTTTAGATAAAA+GGG - chr1_3:61139294-61139313 None:intergenic 30.0%
ATAGAAGGCCTTTAGATAAA+AGG - chr1_3:61139295-61139314 None:intergenic 30.0%
TCAAACACACACATAATAGA+AGG - chr1_3:61139310-61139329 None:intergenic 30.0%
!! CTCAGACAATTTACTTTTGT+AGG + chr1_3:61139398-61139417 Msa0130720:intron 30.0%
!! GTAGGTTGAAAATAGTTTTG+GGG + chr1_3:61139416-61139435 Msa0130720:intron 30.0%
GAAAATGAATTATAGCAGTG+TGG - chr1_3:61139488-61139507 None:intergenic 30.0%
TAATAATGAAGAAATAGGCC+AGG - chr1_3:61139595-61139614 None:intergenic 30.0%
TTAATATGGAAGCTGCTTAA+TGG + chr1_3:61139732-61139751 Msa0130720:intron 30.0%
GTAGAAGTTCAATATTTGCT+AGG + chr1_3:61139833-61139852 Msa0130720:intron 30.0%
TCAGCTAAGATTATGGAAAA+AGG - chr1_3:61139898-61139917 None:intergenic 30.0%
GTTGTTATGGATATGGAATA+TGG - chr1_3:61140005-61140024 None:intergenic 30.0%
GTGAAATGTTGTTATGGATA+TGG - chr1_3:61140012-61140031 None:intergenic 30.0%
! ATCTTGTTTCTTTGTTAGGT+TGG + chr1_3:61140037-61140056 Msa0130720:intron 30.0%
TATCAGATATATGTAGAGCT+TGG + chr1_3:61140124-61140143 Msa0130720:intron 30.0%
! AGTTAATGCAGCAATTTTCA+AGG - chr1_3:61140272-61140291 None:intergenic 30.0%
ATCTCAATCAAGTATAGATG+TGG - chr1_3:61140384-61140403 None:intergenic 30.0%
ACATTTCTGATTTCGCTTAT+AGG - chr1_3:61140480-61140499 None:intergenic 30.0%
!! ATTTGTACTTTTTGATCTGG+AGG + chr1_3:61140586-61140605 Msa0130720:intron 30.0%
! AAGTTGTTATTCGTATCAAG+CGG - chr1_3:61140794-61140813 None:intergenic 30.0%
!! TGTTTGGTAATACAGCTTTT+TGG + chr1_3:61140817-61140836 Msa0130720:intron 30.0%
!! GTTTGGTAATACAGCTTTTT+GGG + chr1_3:61140818-61140837 Msa0130720:intron 30.0%
TATTAAGCACTATGTGATTC+AGG + chr1_3:61141008-61141027 Msa0130720:CDS 30.0%
AAAGAATAAGAAAACCTTGC+AGG - chr1_3:61141087-61141106 None:intergenic 30.0%
! GCAAGGTTTTCTTATTCTTT+TGG + chr1_3:61141087-61141106 Msa0130720:intron 30.0%
GAAAAGATCAAATCCTTTGT+TGG - chr1_3:61141237-61141256 None:intergenic 30.0%
! TTCTCATTTAGATCTGGAAT+CGG - chr1_3:61141272-61141291 None:intergenic 30.0%
ATAAGCTTCTCATTTAGATC+TGG - chr1_3:61141278-61141297 None:intergenic 30.0%
AATGAGAAGCTTATTGTGTT+TGG + chr1_3:61141284-61141303 Msa0130720:CDS 30.0%
AAAGGAGTAACAAAAGGAAA+GGG - chr1_3:61141399-61141418 None:intergenic 30.0%
AAAAGGAGTAACAAAAGGAA+AGG - chr1_3:61141400-61141419 None:intergenic 30.0%
AGGATAAAAGGAGTAACAAA+AGG - chr1_3:61141405-61141424 None:intergenic 30.0%
AAAAACCTTCATGGCTAAAA+CGG - chr1_3:61141430-61141449 None:intergenic 30.0%
! TTGCATAATTTTTCATGTGC+TGG + chr1_3:61141449-61141468 Msa0130720:intron 30.0%
CAGATGTCAAAATTAGTATG+GGG - chr1_3:61141641-61141660 None:intergenic 30.0%
! TATGTTTCTAATGATTAGGC+CGG + chr1_3:61142167-61142186 Msa0130720:intron 30.0%
!!! ATTTTGAAACAGGGTAAATG+TGG + chr1_3:61142299-61142318 Msa0130720:intron 30.0%
GATAAGACATCATGTGATAA+TGG + chr1_3:61142666-61142685 Msa0130720:CDS 30.0%
!! TCATGTGATAATGGTTGTAA+TGG + chr1_3:61142675-61142694 Msa0130720:CDS 30.0%
TGCCTATAATTATTTGCTTG+AGG + chr1_3:61142713-61142732 Msa0130720:CDS 30.0%
AGCCTCAAGCAAATAATTAT+AGG - chr1_3:61142718-61142737 None:intergenic 30.0%
TATAATTATTTGCTTGAGGC+TGG + chr1_3:61142717-61142736 Msa0130720:CDS 30.0%
GCTGCTTATTTAGTTAATCA+CGG + chr1_3:61142864-61142883 Msa0130720:CDS 30.0%
! GTTTTCATGCAAACTTACAT+TGG + chr1_3:61143131-61143150 Msa0130720:CDS 30.0%
TTCTCTTGCTACATATAAGA+GGG - chr1_3:61143169-61143188 None:intergenic 30.0%
ATTCTCTTGCTACATATAAG+AGG - chr1_3:61143170-61143189 None:intergenic 30.0%
! GAATTCTTGATGATCCAATA+TGG - chr1_3:61143263-61143282 None:intergenic 30.0%
!! TGGTTTGTGACTCTTGATTT+TGG + chr1_3:61137930-61137949 Msa0130720:five_prime_UTR 35.0%
TAGGATTAGGTTAAATGGCT+AGG + chr1_3:61137979-61137998 Msa0130720:exon 35.0%
CTCTGTTACAACAAAGCAAA+AGG + chr1_3:61138015-61138034 Msa0130720:CDS 35.0%
ACAACAAAGCAAAAGGAAGA+AGG + chr1_3:61138022-61138041 Msa0130720:CDS 35.0%
CAACAAAGCAAAAGGAAGAA+GGG + chr1_3:61138023-61138042 Msa0130720:CDS 35.0%
! CTTGGTTGGATTTTTCCTTT+TGG + chr1_3:61138097-61138116 Msa0130720:CDS 35.0%
AATGTCTGTATGTAGCCAAA+AGG - chr1_3:61138115-61138134 None:intergenic 35.0%
!! TTTTGGCTACATACAGACAT+TGG + chr1_3:61138114-61138133 Msa0130720:CDS 35.0%
TTAGTGTGAGAAATGATACG+CGG + chr1_3:61138192-61138211 Msa0130720:intron 35.0%
!!! TTTTGGGATGCTATTGCTAT+AGG + chr1_3:61138321-61138340 Msa0130720:intron 35.0%
ATGCTATTGCTATAGGATAG+AGG + chr1_3:61138328-61138347 Msa0130720:intron 35.0%
!!! GTAAGTACTCCTGTCTTTTT+TGG + chr1_3:61138466-61138485 Msa0130720:intron 35.0%
GTGAATCAAACACTCTCTAA+TGG - chr1_3:61138500-61138519 None:intergenic 35.0%
GACAAAAACTTGTCTCATCA+TGG + chr1_3:61138690-61138709 Msa0130720:intron 35.0%
TTAGTGAGGGACAAGAATTT+CGG + chr1_3:61138714-61138733 Msa0130720:intron 35.0%
TAAAAAACAGAGGACTGTAC+TGG - chr1_3:61138820-61138839 None:intergenic 35.0%
! TTTGGTTTATGCTCTAGTTC+TGG + chr1_3:61138878-61138897 Msa0130720:intron 35.0%
! AAATAACTTGTCAGTCTCTG+AGG + chr1_3:61139168-61139187 Msa0130720:CDS 35.0%
ATGAAACTTACAGCATATCC+AGG - chr1_3:61139462-61139481 None:intergenic 35.0%
ATAAATTCGTCAACAGCTTC+AGG - chr1_3:61139675-61139694 None:intergenic 35.0%
TATGGATATGGAATATGGAG+AGG - chr1_3:61140000-61140019 None:intergenic 35.0%
! AGCATCGAGCTAATATCTAT+GGG - chr1_3:61140150-61140169 None:intergenic 35.0%
!! AAGCATCGAGCTAATATCTA+TGG - chr1_3:61140151-61140170 None:intergenic 35.0%
TGGTTAACTGGACATGATAT+AGG + chr1_3:61140192-61140211 Msa0130720:intron 35.0%
ATAATCTGCTAGTGTTTGTG+TGG - chr1_3:61140223-61140242 None:intergenic 35.0%
TTCGACACCTTATATGACAA+AGG - chr1_3:61140315-61140334 None:intergenic 35.0%
!! GTCATATAAGGTGTCGAATT+CGG + chr1_3:61140317-61140336 Msa0130720:intron 35.0%
GAGTACTAGGATTATTAGTG+TGG + chr1_3:61140343-61140362 Msa0130720:intron 35.0%
CACTAACATAGCAATTCTAC+TGG - chr1_3:61140642-61140661 None:intergenic 35.0%
CGAATAACAACTTCTGTGTT+TGG + chr1_3:61140801-61140820 Msa0130720:intron 35.0%
TAAACTGATGCCAAAAAACG+TGG - chr1_3:61140860-61140879 None:intergenic 35.0%
AGACAAATCATAGGTTAGGT+TGG - chr1_3:61140945-61140964 None:intergenic 35.0%
TTTGACTGCAGACAAATCAT+AGG - chr1_3:61140954-61140973 None:intergenic 35.0%
! TGATTTGTCTGCAGTCAAAA+AGG + chr1_3:61140955-61140974 Msa0130720:intron 35.0%
AGTCAAAAAGGACACTTCAA+AGG + chr1_3:61140967-61140986 Msa0130720:intron 35.0%
GTCAAAAAGGACACTTCAAA+GGG + chr1_3:61140968-61140987 Msa0130720:intron 35.0%
!!! TGGTTTTTTACAGTCAATCC+TGG + chr1_3:61141107-61141126 Msa0130720:intron 35.0%
GAATGCTTCATGTTTCATAC+TGG - chr1_3:61141186-61141205 None:intergenic 35.0%
! AAACATGAAGCATTCATGCT+TGG + chr1_3:61141191-61141210 Msa0130720:CDS 35.0%
GCTAAAACGGAAAGGATAAA+AGG - chr1_3:61141417-61141436 None:intergenic 35.0%
! ATGTTTCTAATGATTAGGCC+GGG + chr1_3:61142168-61142187 Msa0130720:intron 35.0%
! TTTTCCTGTGGCAAGAAAAT+TGG - chr1_3:61142366-61142385 None:intergenic 35.0%
! AAGATTAGCAAGAGCATAGT+TGG - chr1_3:61142584-61142603 None:intergenic 35.0%
TGTTATGTCACACTTGACAA+AGG - chr1_3:61142646-61142665 None:intergenic 35.0%
!! TGTGATAATGGTTGTAATGG+AGG + chr1_3:61142678-61142697 Msa0130720:CDS 35.0%
GATGAATTGCGAAACTTAGA+CGG + chr1_3:61142945-61142964 Msa0130720:intron 35.0%
TTCATGCAAACTTACATTGG+TGG + chr1_3:61143134-61143153 Msa0130720:CDS 35.0%
ATTGGATCATCAAGAATTCG+TGG + chr1_3:61143264-61143283 Msa0130720:CDS 35.0%
TTGGATCATCAAGAATTCGT+GGG + chr1_3:61143265-61143284 Msa0130720:CDS 35.0%
GAGAAAAATGGGGAGAAAAA+GGG + chr1_3:61143288-61143307 Msa0130720:CDS 35.0%
TATGTGTGGAATGAACACAA+TGG + chr1_3:61143337-61143356 Msa0130720:CDS 35.0%
!!! GCATATGATTTGTTTTCTGC+TGG - chr1_3:61143392-61143411 None:intergenic 35.0%
CTACGCTTTGATTCTTGTCT+TGG + chr1_3:61138079-61138098 Msa0130720:CDS 40.0%
GCTTTGATTCTTGTCTTGGT+TGG + chr1_3:61138083-61138102 Msa0130720:CDS 40.0%
! CATACAGACATTGGTCTAAC+AGG + chr1_3:61138123-61138142 Msa0130720:CDS 40.0%
! TGATCTCTCTCAGTCTTTTG+AGG + chr1_3:61138406-61138425 Msa0130720:intron 40.0%
! TTTGAGGTGGTAGAACCTTT+AGG + chr1_3:61138422-61138441 Msa0130720:intron 40.0%
TTGAGGTGGTAGAACCTTTA+GGG + chr1_3:61138423-61138442 Msa0130720:intron 40.0%
!!! AGTACTCCTGTCTTTTTTGG+TGG + chr1_3:61138469-61138488 Msa0130720:intron 40.0%
GTTCTACCACCAAAAAAGAC+AGG - chr1_3:61138478-61138497 None:intergenic 40.0%
TGTCTCATCATGGTTTAGTG+AGG + chr1_3:61138700-61138719 Msa0130720:intron 40.0%
GTCTCATCATGGTTTAGTGA+GGG + chr1_3:61138701-61138720 Msa0130720:intron 40.0%
ATGGAACTAGACAAAACAGG+TGG - chr1_3:61138758-61138777 None:intergenic 40.0%
!! ACCTGTTTTGTCTAGTTCCA+TGG + chr1_3:61138757-61138776 Msa0130720:intron 40.0%
GTGACATCAGAACAAAGCTA+AGG - chr1_3:61138858-61138877 None:intergenic 40.0%
! GCTTTGTTCTGATGTCACTT+TGG + chr1_3:61138860-61138879 Msa0130720:intron 40.0%
!! GGCTGTTATTGGTTTGTAAC+AGG + chr1_3:61139033-61139052 Msa0130720:intron 40.0%
! AAAGGGAGTATACATTAGGC+AGG - chr1_3:61139277-61139296 None:intergenic 40.0%
ATGGAAGCTGCTTAATGGTT+TGG + chr1_3:61139737-61139756 Msa0130720:intron 40.0%
TGGAAGCTGCTTAATGGTTT+GGG + chr1_3:61139738-61139757 Msa0130720:intron 40.0%
! GGTTTGGTTAGACTTGATGT+TGG + chr1_3:61139759-61139778 Msa0130720:intron 40.0%
!! AGTTTCTCTGGAATAGTGCA+TGG + chr1_3:61140172-61140191 Msa0130720:intron 40.0%
TGGAATAGTGCATGGTTAAC+TGG + chr1_3:61140180-61140199 Msa0130720:intron 40.0%
! TCGAATTCGGTTAGAGTACT+AGG + chr1_3:61140330-61140349 Msa0130720:intron 40.0%
CAAGTATAGATGTGGTACAG+CGG - chr1_3:61140376-61140395 None:intergenic 40.0%
TATTCGTATCAAGCGGTTGT+TGG - chr1_3:61140787-61140806 None:intergenic 40.0%
!! TGGTAATACAGCTTTTTGGG+TGG + chr1_3:61140821-61140840 Msa0130720:intron 40.0%
!!! GATGTTTCTGCCACGTTTTT+TGG + chr1_3:61140847-61140866 Msa0130720:intron 40.0%
CTGCAGACAAATCATAGGTT+AGG - chr1_3:61140949-61140968 None:intergenic 40.0%
ATTCATGCTTGGAACATCCA+AGG + chr1_3:61141202-61141221 Msa0130720:CDS 40.0%
TTCATGCTTGGAACATCCAA+GGG + chr1_3:61141203-61141222 Msa0130720:CDS 40.0%
TTGTCATGTCTGCAATTGTC+TGG + chr1_3:61141362-61141381 Msa0130720:intron 40.0%
!! TTTCATGTGCTGGCTGTTTA+TGG + chr1_3:61141459-61141478 Msa0130720:intron 40.0%
AATTTCGATTGGAGGGAGAA+GGG + chr1_3:61141861-61141880 Msa0130720:CDS 40.0%
AGCACTACAGGATCTATAGA+AGG + chr1_3:61142338-61142357 Msa0130720:CDS 40.0%
! AAGACTGAGTAGTTTTCCTG+TGG - chr1_3:61142378-61142397 None:intergenic 40.0%
TCTTAGTGAACAACAGCTTG+TGG + chr1_3:61142394-61142413 Msa0130720:CDS 40.0%
AATTATTTGCTTGAGGCTGG+TGG + chr1_3:61142720-61142739 Msa0130720:CDS 40.0%
TGAACTCTAATCATGTGCAG+TGG + chr1_3:61143097-61143116 Msa0130720:intron 40.0%
GAACTCTAATCATGTGCAGT+GGG + chr1_3:61143098-61143117 Msa0130720:intron 40.0%
AACTCTAATCATGTGCAGTG+GGG + chr1_3:61143099-61143118 Msa0130720:intron 40.0%
! CTTGTGGGTTATAATGCACA+AGG + chr1_3:61143209-61143228 Msa0130720:CDS 40.0%
CACAAGGTTTCTCGATTCTT+AGG + chr1_3:61143225-61143244 Msa0130720:CDS 40.0%
TGGATCATCAAGAATTCGTG+GGG + chr1_3:61143266-61143285 Msa0130720:CDS 40.0%
AGAATTCGTGGGGAGAAAAA+TGG + chr1_3:61143276-61143295 Msa0130720:CDS 40.0%
GAATTCGTGGGGAGAAAAAT+GGG + chr1_3:61143277-61143296 Msa0130720:CDS 40.0%
AATTCGTGGGGAGAAAAATG+GGG + chr1_3:61143278-61143297 Msa0130720:CDS 40.0%
GGAGAAAAATGGGGAGAAAA+AGG + chr1_3:61143287-61143306 Msa0130720:CDS 40.0%
GGTATTACAAGCTTTGCAGA+GGG + chr1_3:61143309-61143328 Msa0130720:CDS 40.0%
AATGGCTAGGATCAAACCTC+AGG + chr1_3:61137992-61138011 Msa0130720:exon 45.0%
! CTTTGTTGTAACAGAGCCTG+AGG - chr1_3:61138011-61138030 None:intergenic 45.0%
AAAGGAAGAAGGGACCTTCT+CGG + chr1_3:61138033-61138052 Msa0130720:CDS 45.0%
!! TCTCTCTCAGTCTTTTGAGG+TGG + chr1_3:61138409-61138428 Msa0130720:intron 45.0%
GTGAATCAAACGCTCCCTAA+AGG - chr1_3:61138440-61138459 None:intergenic 45.0%
CTAGACAAAACAGGTGGCAA+GGG - chr1_3:61138752-61138771 None:intergenic 45.0%
ACTAGACAAAACAGGTGGCA+AGG - chr1_3:61138753-61138772 None:intergenic 45.0%
GCCATGGAACTAGACAAAAC+AGG - chr1_3:61138761-61138780 None:intergenic 45.0%
!!! GCTCTAGTTCTGGCAGATTT+TGG + chr1_3:61138888-61138907 Msa0130720:intron 45.0%
! TAACTTGTCAGTCTCTGAGG+AGG + chr1_3:61139171-61139190 Msa0130720:CDS 45.0%
ATGAAACTACAGAAGGGCTG+AGG - chr1_3:61139241-61139260 None:intergenic 45.0%
! TGAGTTTTCCCATTGAGACG+AGG + chr1_3:61139327-61139346 Msa0130720:intron 45.0%
CAGAAAGTCCTCGTCTCAAT+GGG - chr1_3:61139338-61139357 None:intergenic 45.0%
TCGAAGAAATCTGAGCTACC+TGG + chr1_3:61139441-61139460 Msa0130720:CDS 45.0%
! GCTGCTTAATGGTTTGGGTT+TGG + chr1_3:61139743-61139762 Msa0130720:intron 45.0%
! GCTCGATGCTTTAGTTTCTC+TGG + chr1_3:61140160-61140179 Msa0130720:intron 45.0%
! CCAGAGGGTGTGTTTATTTC+AGG - chr1_3:61140737-61140756 None:intergenic 45.0%
CCTGAAATAAACACACCCTC+TGG + chr1_3:61140734-61140753 Msa0130720:intron 45.0%
AAGCACTATGTGATTCAGGC+AGG + chr1_3:61141012-61141031 Msa0130720:CDS 45.0%
AGCACTATGTGATTCAGGCA+GGG + chr1_3:61141013-61141032 Msa0130720:CDS 45.0%
GCAGCTGATTGGAACTTAAG+AGG + chr1_3:61141054-61141073 Msa0130720:CDS 45.0%
TAAGAGGAAAGCAACCTGCA+AGG + chr1_3:61141070-61141089 Msa0130720:CDS 45.0%
TTTGTTGGTGTGTTTGCCCT+TGG - chr1_3:61141222-61141241 None:intergenic 45.0%
AAGGGCAAACACACCAACAA+AGG + chr1_3:61141221-61141240 Msa0130720:CDS 45.0%
TGTGTTTGGACAAGTCGTCA+AGG + chr1_3:61141298-61141317 Msa0130720:CDS 45.0%
GTGTTTGGACAAGTCGTCAA+GGG + chr1_3:61141299-61141318 Msa0130720:CDS 45.0%
CCTTCATGGCTAAAACGGAA+AGG - chr1_3:61141425-61141444 None:intergenic 45.0%
!! CCTTTCCGTTTTAGCCATGA+AGG + chr1_3:61141422-61141441 Msa0130720:intron 45.0%
! TTCTATACCGGTGTTAGAGG+TGG + chr1_3:61141774-61141793 Msa0130720:CDS 45.0%
GATTGCCGGAGAATTTCGAT+TGG + chr1_3:61141850-61141869 Msa0130720:CDS 45.0%
TCCCTCCAATCGAAATTCTC+CGG - chr1_3:61141858-61141877 None:intergenic 45.0%
GAATTTCGATTGGAGGGAGA+AGG + chr1_3:61141860-61141879 Msa0130720:CDS 45.0%
ATTTCGATTGGAGGGAGAAG+GGG + chr1_3:61141862-61141881 Msa0130720:CDS 45.0%
TGTTACTGGAGTCAAGATGC+AGG + chr1_3:61141887-61141906 Msa0130720:CDS 45.0%
AGGGTAAATGTGGATCTTGC+TGG + chr1_3:61142309-61142328 Msa0130720:intron 45.0%
GGGTAAATGTGGATCTTGCT+GGG + chr1_3:61142310-61142329 Msa0130720:intron 45.0%
GAAACTTCATACCCGTACAC+TGG + chr1_3:61142753-61142772 Msa0130720:CDS 45.0%
!! GCAATTTGGTTCTCATCCAC+AGG - chr1_3:61142846-61142865 None:intergenic 45.0%
TAAGGGGACTTACTTGCAAG+TGG - chr1_3:61142891-61142910 None:intergenic 45.0%
CTATGTAACACCGACACTTC+AGG - chr1_3:61143023-61143042 None:intergenic 45.0%
ACTCTAATCATGTGCAGTGG+GGG + chr1_3:61143100-61143119 Msa0130720:intron 45.0%
AGCAAGAGAATGCTGAACCA+CGG + chr1_3:61143179-61143198 Msa0130720:CDS 45.0%
AACCACGGTGTATTGCTTGT+GGG + chr1_3:61143194-61143213 Msa0130720:CDS 45.0%
GGCTTCGCAAGAAACCATAT+TGG + chr1_3:61143246-61143265 Msa0130720:CDS 45.0%
GGGTATTACAAGCTTTGCAG+AGG + chr1_3:61143308-61143327 Msa0130720:CDS 45.0%
CACAATGGTTTCTGCTGCAA+TGG + chr1_3:61143352-61143371 Msa0130720:CDS 45.0%
AATGGTTTCTGCTGCAATGG+TGG + chr1_3:61143355-61143374 Msa0130720:CDS 45.0%
!! AAAAAAAAAAAAAAAAAAAG+AGG - chr1_3:61139957-61139976 None:intergenic 5.0%
CAAAACAGGTGGCAAGGGAT+CGG - chr1_3:61138747-61138766 None:intergenic 50.0%
GCAGAAAGTCCTCGTCTCAA+TGG - chr1_3:61139339-61139358 None:intergenic 50.0%
TGAGACGAGGACTTTCTGCA+AGG + chr1_3:61139340-61139359 Msa0130720:intron 50.0%
GCACTATGTGATTCAGGCAG+GGG + chr1_3:61141014-61141033 Msa0130720:CDS 50.0%
TATGTGATTCAGGCAGGGGA+TGG + chr1_3:61141018-61141037 Msa0130720:CDS 50.0%
AAGGAACAGGAGCAGCTGAT+TGG + chr1_3:61141043-61141062 Msa0130720:CDS 50.0%
CAACTCACTGGATCATCACC+AGG - chr1_3:61141128-61141147 None:intergenic 50.0%
CAAGGGAGAGGATGTTGTTC+AGG + chr1_3:61141316-61141335 Msa0130720:CDS 50.0%
! CGGTTCTATACCGGTGTTAG+AGG + chr1_3:61141771-61141790 Msa0130720:CDS 50.0%
AATCCTTCCACATCCAAGGG+CGG - chr1_3:61141834-61141853 None:intergenic 50.0%
GGCAATCCTTCCACATCCAA+GGG - chr1_3:61141837-61141856 None:intergenic 50.0%
CTTGGATGTGGAAGGATTGC+CGG + chr1_3:61141836-61141855 Msa0130720:CDS 50.0%
TGCCGGAGAATTTCGATTGG+AGG + chr1_3:61141853-61141872 Msa0130720:CDS 50.0%
GCCGGAGAATTTCGATTGGA+GGG + chr1_3:61141854-61141873 Msa0130720:CDS 50.0%
TTTCGATTGGAGGGAGAAGG+GGG + chr1_3:61141863-61141882 Msa0130720:CDS 50.0%
! GGAGCCAATTTTCTTGCCAC+AGG + chr1_3:61142359-61142378 Msa0130720:CDS 50.0%
ACTTCATACCCGTACACTGG+TGG + chr1_3:61142756-61142775 Msa0130720:CDS 50.0%
ATACCCGTACACTGGTGGTA+AGG + chr1_3:61142761-61142780 Msa0130720:CDS 50.0%
TACCCGTACACTGGTGGTAA+GGG + chr1_3:61142762-61142781 Msa0130720:CDS 50.0%
TCACCCTTACCACCAGTGTA+CGG - chr1_3:61142768-61142787 None:intergenic 50.0%
CTCCGACAAACCTGAAGTGT+CGG + chr1_3:61143010-61143029 Msa0130720:intron 50.0%
! CACCGACACTTCAGGTTTGT+CGG - chr1_3:61143015-61143034 None:intergenic 50.0%
ATGTGCAGTGGGGGTAAATG+CGG + chr1_3:61143109-61143128 Msa0130720:intron 50.0%
GAACCACGGTGTATTGCTTG+TGG + chr1_3:61143193-61143212 Msa0130720:CDS 50.0%
AACCCACAAGCAATACACCG+TGG - chr1_3:61143199-61143218 None:intergenic 50.0%
TACAAGCTTTGCAGAGGGCA+TGG + chr1_3:61143314-61143333 Msa0130720:CDS 50.0%
TCCGCAAGCGCAACTGTTTG+TGG + chr1_3:61140759-61140778 Msa0130720:intron 55.0%
CCCACAAACAGTTGCGCTTG+CGG - chr1_3:61140763-61140782 None:intergenic 55.0%
CCGCAAGCGCAACTGTTTGT+GGG + chr1_3:61140760-61140779 Msa0130720:intron 55.0%
CGCAAGCGCAACTGTTTGTG+GGG + chr1_3:61140761-61140780 Msa0130720:intron 55.0%
ATTCAGGCAGGGGATGGTCA+AGG + chr1_3:61141024-61141043 Msa0130720:CDS 55.0%
TGGACAAGTCGTCAAGGGAG+AGG + chr1_3:61141304-61141323 Msa0130720:CDS 55.0%
GGGGAATCCACCTCTAACAC+CGG - chr1_3:61141784-61141803 None:intergenic 55.0%
! GGTGGATTCCCCTCGAGAAA+CGG + chr1_3:61141792-61141811 Msa0130720:CDS 55.0%
TTCCCCTCGAGAAACGGAGT+TGG + chr1_3:61141798-61141817 Msa0130720:CDS 55.0%
TCGCCAACTCCGTTTCTCGA+GGG - chr1_3:61141804-61141823 None:intergenic 55.0%
CGGCAATCCTTCCACATCCA+AGG - chr1_3:61141838-61141857 None:intergenic 55.0%
TGCTGGGCTTTCAGCACTAC+AGG + chr1_3:61142326-61142345 Msa0130720:CDS 55.0%
! GCTTGTGGACTGTGACAGCA+AGG + chr1_3:61142409-61142428 Msa0130720:CDS 55.0%
!! GCTTGAGGCTGGTGGATTAG+AGG + chr1_3:61142728-61142747 Msa0130720:CDS 55.0%
!! TGAGGCTGGTGGATTAGAGG+AGG + chr1_3:61142731-61142750 Msa0130720:CDS 55.0%
CACCCTTACCACCAGTGTAC+GGG - chr1_3:61142767-61142786 None:intergenic 55.0%
! TGCAGAGGGCATGGTATGTG+TGG + chr1_3:61143323-61143342 Msa0130720:CDS 55.0%
!! GGGACCTTCTCGGATTAGCG+CGG + chr1_3:61138043-61138062 Msa0130720:CDS 60.0%
CTAGCCGCGCTAATCCGAGA+AGG - chr1_3:61138050-61138069 None:intergenic 60.0%
TTGCGCTTGCGGACACCAGA+GGG - chr1_3:61140752-61140771 None:intergenic 60.0%
GCAGGGGATGGTCAAGGAAC+AGG + chr1_3:61141030-61141049 Msa0130720:CDS 60.0%
CGCCAACTCCGTTTCTCGAG+GGG - chr1_3:61141803-61141822 None:intergenic 60.0%
CTCGCCAACTCCGTTTCTCG+AGG - chr1_3:61141805-61141824 None:intergenic 60.0%
CTCGAGAAACGGAGTTGGCG+AGG + chr1_3:61141803-61141822 Msa0130720:CDS 60.0%
AGGGAGAAGGGGGCTGTTAC+TGG + chr1_3:61141873-61141892 Msa0130720:CDS 60.0%
GTTGCGCTTGCGGACACCAG+AGG - chr1_3:61140753-61140772 None:intergenic 65.0%
GGTTGCACCGCCCTTGGATG+TGG + chr1_3:61141824-61141843 Msa0130720:CDS 65.0%
GCACCGCCCTTGGATGTGGA+AGG + chr1_3:61141828-61141847 Msa0130720:CDS 65.0%
TGGCGAGGTTGCACCGCCCT+TGG + chr1_3:61141818-61141837 Msa0130720:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 61137839 61143421 61137839 ID=Msa0130720;Name=Msa0130720
chr1_3 mRNA 61137839 61143421 61137839 ID=Msa0130720-mRNA-1;Parent=Msa0130720;Name=Msa0130720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=154|0.55|0.5|1|1|1|10|0|470
chr1_3 exon 61137839 61138144 61137839 ID=Msa0130720-mRNA-1:exon:20195;Parent=Msa0130720-mRNA-1
chr1_3 exon 61139150 61139192 61139150 ID=Msa0130720-mRNA-1:exon:20196;Parent=Msa0130720-mRNA-1
chr1_3 exon 61139420 61139470 61139420 ID=Msa0130720-mRNA-1:exon:20197;Parent=Msa0130720-mRNA-1
chr1_3 exon 61139618 61139703 61139618 ID=Msa0130720-mRNA-1:exon:20198;Parent=Msa0130720-mRNA-1
chr1_3 exon 61140969 61141091 61140969 ID=Msa0130720-mRNA-1:exon:20199;Parent=Msa0130720-mRNA-1
chr1_3 exon 61141187 61141337 61141187 ID=Msa0130720-mRNA-1:exon:20200;Parent=Msa0130720-mRNA-1
chr1_3 exon 61141771 61141908 61141771 ID=Msa0130720-mRNA-1:exon:20201;Parent=Msa0130720-mRNA-1
chr1_3 exon 61142311 61142430 61142311 ID=Msa0130720-mRNA-1:exon:20202;Parent=Msa0130720-mRNA-1
chr1_3 exon 61142654 61142897 61142654 ID=Msa0130720-mRNA-1:exon:20203;Parent=Msa0130720-mRNA-1
chr1_3 exon 61143117 61143421 61143117 ID=Msa0130720-mRNA-1:exon:20204;Parent=Msa0130720-mRNA-1
chr1_3 five_prime_UTR 61137839 61137992 61137839 ID=Msa0130720-mRNA-1:five_prime_utr;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61137993 61138144 61137993 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61139150 61139192 61139150 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61139420 61139470 61139420 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61139618 61139703 61139618 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61140969 61141091 61140969 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61141187 61141337 61141187 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61141771 61141908 61141771 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61142311 61142430 61142311 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61142654 61142897 61142654 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
chr1_3 CDS 61143117 61143421 61143117 ID=Msa0130720-mRNA-1:cds;Parent=Msa0130720-mRNA-1
Gene Sequence

>Msa0130720

ATGGCTAGGATCAAACCTCAGGCTCTGTTACAACAAAGCAAAAGGAAGAAGGGACCTTCTCGGATTAGCGCGGCTAGTATTATATTCTACGCTTTGATTCTTGTCTTGGTTGGATTTTTCCTTTTGGCTACATACAGACATTGGTCTAACAGGTCAAGATTGCAATCAGAAAATAACTTGTCAGTCTCTGAGGAGGTTGAAAATAGTTTTGGGGACTCGAAGAAATCTGAGCTACCTGGATATGCTGTCTTAAATACATCTAAAGGGTCTATAATAGTAGAACTGTACAAGGAAAGTGCTCCTGAAGCTGTTGACGAATTTATTGACTTATGTCAAAAAGGACACTTCAAAGGGATGCTTTTTCAGCGTGTTATTAAGCACTATGTGATTCAGGCAGGGGATGGTCAAGGAACAGGAGCAGCTGATTGGAACTTAAGAGGAAAGCAACCTGCAAGTATGAAACATGAAGCATTCATGCTTGGAACATCCAAGGGCAAACACACCAACAAAGGATTTGATCTTTTCATCACAACTGCACCGATTCCAGATCTAAATGAGAAGCTTATTGTGTTTGGACAAGTCGTCAAGGGAGAGGATGTTGTTCAGCGGTTCTATACCGGTGTTAGAGGTGGATTCCCCTCGAGAAACGGAGTTGGCGAGGTTGCACCGCCCTTGGATGTGGAAGGATTGCCGGAGAATTTCGATTGGAGGGAGAAGGGGGCTGTTACTGGAGTCAAGATGCAGGGTAAATGTGGATCTTGCTGGGCTTTCAGCACTACAGGATCTATAGAAGGAGCCAATTTTCTTGCCACAGGAAAACTACTCAGTCTTAGTGAACAACAGCTTGTGGACTGTGACAGCAAGTGTGACATAACAGATAAGACATCATGTGATAATGGTTGTAATGGAGGTCTTATGACAAATGCCTATAATTATTTGCTTGAGGCTGGTGGATTAGAGGAGGAAACTTCATACCCGTACACTGGTGGTAAGGGTGAATGCAAGTTTGATCCAAAGAAAATTGCAGTTAAAATCACAAATTTCACCAATCTACCTGTGGATGAGAACCAAATTGCTGCTTATTTAGTTAATCACGGTCCACTTGCAATGGGGGTAAATGCGGTTTTCATGCAAACTTACATTGGTGGTGTATCATGCCCTCTTATATGTAGCAAGAGAATGCTGAACCACGGTGTATTGCTTGTGGGTTATAATGCACAAGGTTTCTCGATTCTTAGGCTTCGCAAGAAACCATATTGGATCATCAAGAATTCGTGGGGAGAAAAATGGGGAGAAAAAGGGTATTACAAGCTTTGCAGAGGGCATGGTATGTGTGGAATGAACACAATGGTTTCTGCTGCAATGGTGGCTCAAACACAACCAGCAGAAAACAAATCATATGCTTCCTATTAG
Protein sequence

>Msa0130720

MARIKPQALLQQSKRKKGPSRISAASIIFYALILVLVGFFLLATYRHWSNRSRLQSENNLSVSEEVENSFGDSKKSELPGYAVLNTSKGSIIVELYKESAPEAVDEFIDLCQKGHFKGMLFQRVIKHYVIQAGDGQGTGAADWNLRGKQPASMKHEAFMLGTSKGKHTNKGFDLFITTAPIPDLNEKLIVFGQVVKGEDVVQRFYTGVRGGFPSRNGVGEVAPPLDVEGLPENFDWREKGAVTGVKMQGKCGSCWAFSTTGSIEGANFLATGKLLSLSEQQLVDCDSKCDITDKTSCDNGCNGGLMTNAYNYLLEAGGLEEETSYPYTGGKGECKFDPKKIAVKITNFTNLPVDENQIAAYLVNHGPLAMGVNAVFMQTYIGGVSCPLICSKRMLNHGVLLVGYNAQGFSILRLRKKPYWIIKNSWGEKWGEKGYYKLCRGHGMCGMNTMVSAAMVAQTQPAENKSYASY*