Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0814600 | XP_003616041.1 | 96.854 | 604 | 19 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0814600 | sp|F4KEW8|NET4A_ARATH | 45.667 | 600 | 259 | 13 | 6 | 596 | 6 | 547 | 8.34e-135 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0814600 | G7K0U4 | 96.854 | 604 | 19 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1193 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021310 | Msa0814600 | 0.802323 | 5.923276e-49 | -8.615850e-47 |
| Msa0029240 | Msa0814600 | 0.835814 | 1.347623e-56 | -8.615850e-47 |
| Msa0030160 | Msa0814600 | 0.809830 | 1.558718e-50 | -8.615850e-47 |
| Msa0051040 | Msa0814600 | 0.809358 | 1.968368e-50 | -8.615850e-47 |
| Msa0090570 | Msa0814600 | 0.806134 | 9.535263e-50 | -8.615850e-47 |
| Msa0092410 | Msa0814600 | 0.810684 | 1.019650e-50 | -8.615850e-47 |
| Msa0103770 | Msa0814600 | 0.803242 | 3.827869e-49 | -8.615850e-47 |
| Msa0104720 | Msa0814600 | 0.808226 | 3.437307e-50 | -8.615850e-47 |
| Msa0106620 | Msa0814600 | 0.827372 | 1.622819e-54 | -8.615850e-47 |
| Msa0106710 | Msa0814600 | 0.839227 | 1.797470e-57 | -8.615850e-47 |
| Msa0108410 | Msa0814600 | 0.829261 | 5.682873e-55 | -8.615850e-47 |
| Msa0613110 | Msa0814600 | 0.822337 | 2.500233e-53 | -8.615850e-47 |
| Msa0613340 | Msa0814600 | 0.822282 | 2.575406e-53 | -8.615850e-47 |
| Msa0618470 | Msa0814600 | 0.810589 | 1.069409e-50 | -8.615850e-47 |
| Msa0632650 | Msa0814600 | 0.818213 | 2.203846e-52 | -8.615850e-47 |
| Msa0661320 | Msa0814600 | 0.806587 | 7.651616e-50 | -8.615850e-47 |
| Msa0664540 | Msa0814600 | 0.807927 | 3.979027e-50 | -8.615850e-47 |
| Msa0672550 | Msa0814600 | 0.809871 | 1.527435e-50 | -8.615850e-47 |
| Msa0702720 | Msa0814600 | 0.819883 | 9.189759e-53 | -8.615850e-47 |
| Msa0709120 | Msa0814600 | 0.808799 | 2.593481e-50 | -8.615850e-47 |
| Msa0711150 | Msa0814600 | 0.820281 | 7.450384e-53 | -8.615850e-47 |
| Msa0733010 | Msa0814600 | 0.811857 | 5.675566e-51 | -8.615850e-47 |
| Msa0735550 | Msa0814600 | 0.881212 | 2.894810e-70 | -8.615850e-47 |
| Msa0743930 | Msa0814600 | 0.814806 | 1.277344e-51 | -8.615850e-47 |
| Msa0749440 | Msa0814600 | 0.806389 | 8.423014e-50 | -8.615850e-47 |
| Msa0755050 | Msa0814600 | 0.803602 | 3.223902e-49 | -8.615850e-47 |
| Msa0756380 | Msa0814600 | 0.816923 | 4.304700e-52 | -8.615850e-47 |
| Msa0763890 | Msa0814600 | 0.819746 | 9.878299e-53 | -8.615850e-47 |
| Msa0763920 | Msa0814600 | 0.836013 | 1.200299e-56 | -8.615850e-47 |
| Msa0795070 | Msa0814600 | 0.800847 | 1.189375e-48 | -8.615850e-47 |
| Msa0809940 | Msa0814600 | 0.805397 | 1.361701e-49 | -8.615850e-47 |
| Msa0814600 | Msa0816130 | 0.808007 | 3.827299e-50 | -8.615850e-47 |
| Msa0814600 | Msa0817460 | 0.815980 | 6.998317e-52 | -8.615850e-47 |
| Msa0814600 | Msa0822500 | 0.813283 | 2.768347e-51 | -8.615850e-47 |
| Msa0814600 | Msa0831850 | 0.805856 | 1.090481e-49 | -8.615850e-47 |
| Msa0814600 | Msa0832340 | 0.805881 | 1.077318e-49 | -8.615850e-47 |
| Msa0814600 | Msa0844110 | 0.856410 | 3.277518e-62 | -8.615850e-47 |
| Msa0814600 | Msa0846860 | 0.806981 | 6.315278e-50 | -8.615850e-47 |
| Msa0814600 | Msa0853520 | 0.803587 | 3.245967e-49 | -8.615850e-47 |
| Msa0814600 | Msa0855870 | 0.830965 | 2.181212e-55 | -8.615850e-47 |
| Msa0814600 | Msa0863720 | 0.806436 | 8.235589e-50 | -8.615850e-47 |
| Msa0814600 | Msa0868160 | 0.802814 | 4.691546e-49 | -8.615850e-47 |
| Msa0814600 | Msa0894710 | 0.829721 | 4.393102e-55 | -8.615850e-47 |
| Msa0814600 | Msa0899430 | 0.801272 | 9.735528e-49 | -8.615850e-47 |
| Msa0814600 | Msa0899970 | 0.808803 | 2.587534e-50 | -8.615850e-47 |
| Msa0814600 | Msa0902830 | 0.809936 | 1.478652e-50 | -8.615850e-47 |
| Msa0814600 | Msa0903710 | 0.800162 | 1.640211e-48 | -8.615850e-47 |
| Msa0814600 | Msa0903780 | 0.808036 | 3.771708e-50 | -8.615850e-47 |
| Msa0814600 | Msa0921420 | 0.847678 | 9.933102e-60 | -8.615850e-47 |
| Msa0814600 | Msa0927380 | 0.816734 | 4.746058e-52 | -8.615850e-47 |
| Msa0814600 | Msa0934140 | 0.810149 | 1.330894e-50 | -8.615850e-47 |
| Msa0814600 | Msa0936380 | 0.802565 | 5.282000e-49 | -8.615850e-47 |
| Msa0814600 | Msa0936390 | 0.816137 | 6.456251e-52 | -8.615850e-47 |
| Msa0814600 | Msa0960390 | 0.836920 | 7.050468e-57 | -8.615850e-47 |
| Msa0814600 | Msa0965080 | 0.808316 | 3.287662e-50 | -8.615850e-47 |
| Msa0814600 | Msa0965290 | 0.812220 | 4.730831e-51 | -8.615850e-47 |
| Msa0814600 | Msa0974080 | 0.800950 | 1.133010e-48 | -8.615850e-47 |
| Msa0814600 | Msa0975320 | 0.810682 | 1.021051e-50 | -8.615850e-47 |
| Msa0814600 | Msa0999680 | 0.811755 | 5.974460e-51 | -8.615850e-47 |
| Msa0814600 | Msa1006810 | 0.816505 | 5.342170e-52 | -8.615850e-47 |
| Msa0814600 | Msa1034500 | 0.826688 | 2.365210e-54 | -8.615850e-47 |
| Msa0814600 | Msa1036610 | 0.807471 | 4.974616e-50 | -8.615850e-47 |
| Msa0814600 | Msa1066670 | 0.825012 | 5.909747e-54 | -8.615850e-47 |
| Msa0814600 | Msa1072900 | 0.809752 | 1.619686e-50 | -8.615850e-47 |
| Msa0814600 | Msa1093100 | 0.838566 | 2.665518e-57 | -8.615850e-47 |
| Msa0814600 | Msa1142670 | 0.808419 | 3.125736e-50 | -8.615850e-47 |
| Msa0814600 | Msa1147740 | 0.808563 | 2.912135e-50 | -8.615850e-47 |
| Msa0814600 | Msa1148980 | 0.816658 | 4.936749e-52 | -8.615850e-47 |
| Msa0814600 | Msa1221330 | 0.806189 | 9.283035e-50 | -8.615850e-47 |
| Msa0814600 | Msa1225860 | -0.819791 | 9.645433e-53 | -8.615850e-47 |
| Msa0814600 | Msa1226270 | 0.813976 | 1.949026e-51 | -8.615850e-47 |
| Msa0814600 | Msa1232740 | 0.808560 | 2.916475e-50 | -8.615850e-47 |
| Msa0814600 | Msa1236110 | -0.807124 | 5.892822e-50 | -8.615850e-47 |
| Msa0814600 | Msa1238170 | 0.801887 | 7.282321e-49 | -8.615850e-47 |
| Msa0814600 | Msa1238660 | 0.807212 | 5.643462e-50 | -8.615850e-47 |
| Msa0814600 | Msa1238820 | 0.801333 | 9.459066e-49 | -8.615850e-47 |
| Msa0814600 | Msa1240510 | 0.802319 | 5.934609e-49 | -8.615850e-47 |
| Msa0814600 | Msa1271130 | 0.827074 | 1.911888e-54 | -8.615850e-47 |
| Msa0814600 | Msa1303070 | 0.805685 | 1.184683e-49 | -8.615850e-47 |
| Msa0814600 | Msa1319560 | 0.830773 | 2.431508e-55 | -8.615850e-47 |
| Msa0814600 | Msa1325410 | -0.814863 | 1.240770e-51 | -8.615850e-47 |
| Msa0814600 | Msa1332050 | 0.802378 | 5.773075e-49 | -8.615850e-47 |
| Msa0814600 | Msa1341840 | 0.819092 | 1.392266e-52 | -8.615850e-47 |
| Msa0814600 | Msa1345810 | 0.803812 | 2.914988e-49 | -8.615850e-47 |
| Msa0814600 | Msa1346660 | 0.810868 | 9.303941e-51 | -8.615850e-47 |
| Msa0814600 | Msa1371940 | 0.801161 | 1.026172e-48 | -8.615850e-47 |
| Msa0814600 | Msa1380220 | 0.809205 | 2.122557e-50 | -8.615850e-47 |
| Msa0814600 | Msa1392210 | 0.827346 | 1.645540e-54 | -8.615850e-47 |
| Msa0814600 | Msa1393840 | -0.816899 | 4.358283e-52 | -8.615850e-47 |
| Msa0814600 | Msa1401460 | 0.820749 | 5.819944e-53 | -8.615850e-47 |
| Msa0814600 | Msa1412130 | 0.810512 | 1.111207e-50 | -8.615850e-47 |
| Msa0814600 | Msa1418240 | 0.816305 | 5.922845e-52 | -8.615850e-47 |
| Msa0814600 | Msa1425260 | 0.817127 | 3.873274e-52 | -8.615850e-47 |
| Msa0814600 | Msa1442920 | 0.805054 | 1.606395e-49 | -8.615850e-47 |
| Msa0814600 | Msa1453360 | 0.802113 | 6.544902e-49 | -8.615850e-47 |
| Msa0814600 | Msa1458680 | 0.833052 | 6.652912e-56 | -8.615850e-47 |
| Msa0814600 | Msa1460320 | -0.801106 | 1.052683e-48 | -8.615850e-47 |
| Msa0814600 | Msa1461370 | 0.823866 | 1.099625e-53 | -8.615850e-47 |
| Msa0814600 | Msa1462360 | 0.812649 | 3.811465e-51 | -8.615850e-47 |
| Msa0814600 | Msa1463030 | 0.802871 | 4.566772e-49 | -8.615850e-47 |
| Msa0127800 | Msa0814600 | 0.802711 | 4.927040e-49 | -8.615850e-47 |
| Msa0130720 | Msa0814600 | 0.806817 | 6.842853e-50 | -8.615850e-47 |
| Msa0138020 | Msa0814600 | 0.801050 | 1.081152e-48 | -8.615850e-47 |
| Msa0139670 | Msa0814600 | 0.809951 | 1.467615e-50 | -8.615850e-47 |
| Msa0144530 | Msa0814600 | 0.822052 | 2.910577e-53 | -8.615850e-47 |
| Msa0183760 | Msa0814600 | 0.804573 | 2.024720e-49 | -8.615850e-47 |
| Msa0187030 | Msa0814600 | 0.804311 | 2.296025e-49 | -8.615850e-47 |
| Msa0189040 | Msa0814600 | 0.829851 | 4.085472e-55 | -8.615850e-47 |
| Msa0189710 | Msa0814600 | 0.833482 | 5.199976e-56 | -8.615850e-47 |
| Msa0206830 | Msa0814600 | 0.815554 | 8.709568e-52 | -8.615850e-47 |
| Msa0207350 | Msa0814600 | 0.809352 | 1.974086e-50 | -8.615850e-47 |
| Msa0218370 | Msa0814600 | 0.803001 | 4.293385e-49 | -8.615850e-47 |
| Msa0220730 | Msa0814600 | 0.816297 | 5.945942e-52 | -8.615850e-47 |
| Msa0225220 | Msa0814600 | 0.805272 | 1.446238e-49 | -8.615850e-47 |
| Msa0231190 | Msa0814600 | 0.820988 | 5.127002e-53 | -8.615850e-47 |
| Msa0232020 | Msa0814600 | 0.862371 | 5.314157e-64 | -8.615850e-47 |
| Msa0232090 | Msa0814600 | 0.832673 | 8.264504e-56 | -8.615850e-47 |
| Msa0367870 | Msa0814600 | 0.801683 | 8.021738e-49 | -8.615850e-47 |
| Msa0382370 | Msa0814600 | 0.832274 | 1.037945e-55 | -8.615850e-47 |
| Msa0389410 | Msa0814600 | 0.829391 | 5.285319e-55 | -8.615850e-47 |
| Msa0389910 | Msa0814600 | 0.814517 | 1.479549e-51 | -8.615850e-47 |
| Msa0393430 | Msa0814600 | 0.800703 | 1.272410e-48 | -8.615850e-47 |
| Msa0395980 | Msa0814600 | 0.802710 | 4.930582e-49 | -8.615850e-47 |
| Msa0398200 | Msa0814600 | 0.829639 | 4.599978e-55 | -8.615850e-47 |
| Msa0403640 | Msa0814600 | 0.835783 | 1.372491e-56 | -8.615850e-47 |
| Msa0414140 | Msa0814600 | 0.808073 | 3.705462e-50 | -8.615850e-47 |
| Msa0430920 | Msa0814600 | 0.804398 | 2.202106e-49 | -8.615850e-47 |
| Msa0432160 | Msa0814600 | 0.838236 | 3.242575e-57 | -8.615850e-47 |
| Msa0432670 | Msa0814600 | 0.808175 | 3.523286e-50 | -8.615850e-47 |
| Msa0450400 | Msa0814600 | -0.872298 | 3.541515e-67 | -8.615850e-47 |
| Msa0455760 | Msa0814600 | 0.818382 | 2.018382e-52 | -8.615850e-47 |
| Msa0468410 | Msa0814600 | 0.800977 | 1.119021e-48 | -8.615850e-47 |
| Msa0476680 | Msa0814600 | 0.848779 | 4.932222e-60 | -8.615850e-47 |
| Msa0481970 | Msa0814600 | 0.805380 | 1.372484e-49 | -8.615850e-47 |
| Msa0241140 | Msa0814600 | 0.838039 | 3.643127e-57 | -8.615850e-47 |
| Msa0249310 | Msa0814600 | 0.824126 | 9.558037e-54 | -8.615850e-47 |
| Msa0269560 | Msa0814600 | 0.812937 | 3.297689e-51 | -8.615850e-47 |
| Msa0287790 | Msa0814600 | 0.807622 | 4.619144e-50 | -8.615850e-47 |
| Msa0287870 | Msa0814600 | 0.833845 | 4.220704e-56 | -8.615850e-47 |
| Msa0288080 | Msa0814600 | 0.842295 | 2.820944e-58 | -8.615850e-47 |
| Msa0295460 | Msa0814600 | -0.800023 | 1.750371e-48 | -8.615850e-47 |
| Msa0296820 | Msa0814600 | 0.810639 | 1.042928e-50 | -8.615850e-47 |
| Msa0296870 | Msa0814600 | 0.819382 | 1.196308e-52 | -8.615850e-47 |
| Msa0310090 | Msa0814600 | 0.833463 | 5.256721e-56 | -8.615850e-47 |
| Msa0317970 | Msa0814600 | 0.815315 | 9.846871e-52 | -8.615850e-47 |
| Msa0342010 | Msa0814600 | 0.808905 | 2.461801e-50 | -8.615850e-47 |
| Msa0357900 | Msa0814600 | 0.801586 | 8.395129e-49 | -8.615850e-47 |
| Msa0485240 | Msa0814600 | 0.820412 | 6.952602e-53 | -8.615850e-47 |
| Msa0521010 | Msa0814600 | 0.853481 | 2.323138e-61 | -8.615850e-47 |
| Msa0521670 | Msa0814600 | 0.829858 | 4.068189e-55 | -8.615850e-47 |
| Msa0532990 | Msa0814600 | 0.807107 | 5.940049e-50 | -8.615850e-47 |
| Msa0549890 | Msa0814600 | 0.808397 | 3.159346e-50 | -8.615850e-47 |
| Msa0562570 | Msa0814600 | 0.804319 | 2.287440e-49 | -8.615850e-47 |
| Msa0583360 | Msa0814600 | -0.817064 | 4.001812e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0814600 | MtrunA17_Chr5g0432781 | 96.854 | 604 | 19 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1193 |
| Msa0814600 | MtrunA17_Chr3g0107891 | 51.024 | 586 | 198 | 11 | 44 | 604 | 15 | 536 | 7.94e-174 | 504 |
| Msa0814600 | MtrunA17_Chr6g0483761 | 31.509 | 530 | 303 | 13 | 112 | 604 | 2 | 508 | 5.95e-52 | 186 |
| Msa0814600 | MtrunA17_Chr1g0204981 | 59.690 | 129 | 40 | 2 | 16 | 134 | 8 | 134 | 1.86e-42 | 164 |
| Msa0814600 | MtrunA17_Chr1g0185241 | 75.862 | 87 | 21 | 0 | 16 | 102 | 10 | 96 | 2.00e-40 | 158 |
| Msa0814600 | MtrunA17_Chr5g0394641 | 75.862 | 87 | 21 | 0 | 16 | 102 | 8 | 94 | 1.59e-39 | 155 |
| Msa0814600 | MtrunA17_Chr7g0260161 | 33.248 | 391 | 186 | 13 | 16 | 381 | 8 | 348 | 1.15e-37 | 150 |
| Msa0814600 | MtrunA17_Chr5g0412211 | 55.556 | 99 | 40 | 2 | 20 | 118 | 9 | 103 | 4.72e-31 | 129 |
| Msa0814600 | MtrunA17_Chr8g0367521 | 44.715 | 123 | 58 | 3 | 20 | 132 | 9 | 131 | 1.08e-28 | 122 |
| Msa0814600 | MtrunA17_Chr3g0128621 | 28.065 | 367 | 235 | 7 | 237 | 593 | 195 | 542 | 7.43e-28 | 118 |
| Msa0814600 | MtrunA17_Chr5g0427501 | 50.505 | 99 | 45 | 1 | 20 | 118 | 9 | 103 | 1.05e-25 | 112 |
| Msa0814600 | MtrunA17_Chr7g0268631 | 64.557 | 79 | 25 | 2 | 22 | 97 | 53 | 131 | 6.82e-25 | 106 |
| Msa0814600 | MtrunA17_Chr1g0196081 | 54.839 | 93 | 41 | 1 | 8 | 100 | 4 | 95 | 3.95e-24 | 106 |
| Msa0814600 | MtrunA17_Chr8g0350861 | 27.575 | 301 | 167 | 5 | 313 | 598 | 12 | 276 | 9.51e-19 | 87.0 |
| Msa0814600 | MtrunA17_Chr3g0132861 | 53.333 | 75 | 33 | 1 | 30 | 102 | 14 | 88 | 4.40e-18 | 88.6 |
| Msa0814600 | MtrunA17_Chr8g0350851 | 30.516 | 213 | 139 | 3 | 392 | 596 | 14 | 225 | 7.26e-16 | 77.4 |
| Msa0814600 | MtrunA17_Chr3g0128591 | 26.646 | 319 | 196 | 7 | 237 | 522 | 69 | 382 | 8.81e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0814600 | AT5G58320.5 | 45.667 | 600 | 259 | 13 | 6 | 596 | 6 | 547 | 8.48e-136 | 408 |
| Msa0814600 | AT5G58320.2 | 45.667 | 600 | 259 | 13 | 6 | 596 | 6 | 547 | 8.48e-136 | 408 |
| Msa0814600 | AT2G30500.2 | 43.954 | 612 | 240 | 16 | 1 | 604 | 1 | 517 | 1.80e-125 | 380 |
| Msa0814600 | AT2G30500.1 | 43.954 | 612 | 240 | 16 | 1 | 604 | 1 | 517 | 1.80e-125 | 380 |
| Msa0814600 | AT2G30500.3 | 43.842 | 609 | 239 | 16 | 4 | 604 | 3 | 516 | 1.34e-123 | 375 |
| Msa0814600 | AT5G58320.1 | 50.221 | 452 | 200 | 10 | 6 | 448 | 6 | 441 | 1.81e-121 | 370 |
| Msa0814600 | AT5G58320.4 | 50.221 | 452 | 200 | 10 | 6 | 448 | 6 | 441 | 1.81e-121 | 370 |
| Msa0814600 | AT5G58320.3 | 48.565 | 418 | 182 | 9 | 44 | 448 | 1 | 398 | 4.60e-103 | 320 |
| Msa0814600 | AT1G03080.3 | 58.140 | 129 | 35 | 2 | 19 | 128 | 10 | 138 | 1.49e-39 | 156 |
| Msa0814600 | AT1G03080.1 | 58.140 | 129 | 35 | 2 | 19 | 128 | 10 | 138 | 1.49e-39 | 156 |
| Msa0814600 | AT1G03080.2 | 58.140 | 129 | 35 | 2 | 19 | 128 | 10 | 138 | 1.49e-39 | 156 |
| Msa0814600 | AT3G22790.1 | 75.581 | 86 | 20 | 1 | 16 | 101 | 8 | 92 | 2.36e-37 | 149 |
| Msa0814600 | AT3G22790.3 | 75.581 | 86 | 20 | 1 | 16 | 101 | 8 | 92 | 2.36e-37 | 149 |
| Msa0814600 | AT3G22790.2 | 75.581 | 86 | 20 | 1 | 16 | 101 | 8 | 92 | 2.36e-37 | 149 |
| Msa0814600 | AT4G02710.1 | 68.966 | 87 | 27 | 0 | 17 | 103 | 9 | 95 | 8.31e-37 | 147 |
| Msa0814600 | AT4G14760.4 | 69.318 | 88 | 26 | 1 | 16 | 103 | 8 | 94 | 6.30e-35 | 142 |
| Msa0814600 | AT4G14760.2 | 69.318 | 88 | 26 | 1 | 16 | 103 | 8 | 94 | 6.30e-35 | 142 |
| Msa0814600 | AT4G14760.3 | 69.318 | 88 | 26 | 1 | 16 | 103 | 8 | 94 | 6.30e-35 | 142 |
| Msa0814600 | AT4G14760.1 | 69.318 | 88 | 26 | 1 | 16 | 103 | 8 | 94 | 6.30e-35 | 142 |
| Msa0814600 | AT2G22560.1 | 62.651 | 83 | 31 | 0 | 20 | 102 | 9 | 91 | 1.65e-30 | 128 |
| Msa0814600 | AT5G10500.1 | 43.939 | 132 | 71 | 1 | 12 | 140 | 1 | 132 | 5.81e-29 | 123 |
| Msa0814600 | AT1G09720.1 | 61.446 | 83 | 32 | 0 | 20 | 102 | 9 | 91 | 2.94e-28 | 121 |
| Msa0814600 | AT1G58215.1 | 60.241 | 83 | 33 | 0 | 20 | 102 | 9 | 91 | 3.81e-28 | 120 |
| Msa0814600 | AT1G03470.2 | 62.338 | 77 | 28 | 1 | 20 | 95 | 5 | 81 | 6.38e-25 | 105 |
| Msa0814600 | AT1G03470.3 | 62.338 | 77 | 28 | 1 | 20 | 95 | 5 | 81 | 6.38e-25 | 105 |
| Msa0814600 | AT1G03470.1 | 62.338 | 77 | 28 | 1 | 20 | 95 | 5 | 81 | 6.38e-25 | 105 |
| Msa0814600 | AT1G03470.4 | 62.338 | 77 | 28 | 1 | 20 | 95 | 5 | 81 | 6.38e-25 | 105 |
| Msa0814600 | AT2G47920.2 | 56.098 | 82 | 36 | 0 | 16 | 97 | 4 | 85 | 2.76e-24 | 102 |
| Msa0814600 | AT2G47920.1 | 56.098 | 82 | 36 | 0 | 16 | 97 | 4 | 85 | 2.76e-24 | 102 |
| Msa0814600 | AT5G05180.1 | 30.576 | 278 | 150 | 7 | 353 | 595 | 152 | 421 | 1.73e-18 | 89.0 |
| Msa0814600 | AT5G05180.2 | 30.325 | 277 | 128 | 7 | 353 | 595 | 152 | 397 | 2.46e-18 | 88.2 |
| Msa0814600 | AT5G05180.3 | 30.576 | 278 | 150 | 7 | 353 | 595 | 122 | 391 | 3.46e-18 | 87.4 |
| Msa0814600 | AT3G10880.3 | 44.898 | 98 | 53 | 1 | 488 | 584 | 222 | 319 | 5.80e-13 | 70.9 |
| Msa0814600 | AT3G10880.1 | 44.898 | 98 | 53 | 1 | 488 | 584 | 222 | 319 | 5.80e-13 | 70.9 |
| Msa0814600 | AT3G10880.2 | 44.898 | 98 | 53 | 1 | 488 | 584 | 184 | 281 | 5.93e-13 | 70.1 |
| Msa0814600 | AT3G10880.4 | 44.898 | 98 | 53 | 1 | 488 | 584 | 184 | 281 | 5.93e-13 | 70.1 |
| Msa0814600 | AT4G03153.1 | 41.026 | 78 | 41 | 2 | 23 | 95 | 7 | 84 | 7.13e-12 | 65.9 |
Find 192 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATACCAAGATTGAATT+TGG | 0.154326 | 5_3:-46802533 | Msa0814600:intron |
| CATTATCTTATTGTAAAATT+AGG | 0.158172 | 5_3:-46802378 | Msa0814600:three_prime_UTR |
| GCATAAGAGGGTTCCAATTT+TGG | 0.168910 | 5_3:-46802825 | Msa0814600:CDS |
| CTCTGGAAAATGGCTGCTTC+TGG | 0.173281 | 5_3:-46805063 | Msa0814600:exon |
| TCCAAACACACCTTTCTTTC+AGG | 0.174928 | 5_3:-46806007 | Msa0814600:intron |
| GCCGGGTTTGATTTCTTTCT+TGG | 0.186814 | 5_3:-46804186 | Msa0814600:CDS |
| AATTATTAGGCAGCCAAAAT+TGG | 0.250987 | 5_3:+46802812 | None:intergenic |
| TTGTTCGTATGCATTAATTT+TGG | 0.258097 | 5_3:+46803888 | None:intergenic |
| ATCCATATTTCTCGAATCTA+AGG | 0.259377 | 5_3:+46803783 | None:intergenic |
| AAAGAGCCACTTAGAATTCT+TGG | 0.264250 | 5_3:+46804859 | None:intergenic |
| TCAACCAAAGCAACCAATTC+TGG | 0.267721 | 5_3:+46804390 | None:intergenic |
| ATCCTTAGATTCGAGAAATA+TGG | 0.296005 | 5_3:-46803785 | Msa0814600:CDS |
| TTAGATTTATACTAATTATT+AGG | 0.298988 | 5_3:+46802799 | None:intergenic |
| TCAACATCCGTTTCACATTC+CGG | 0.333589 | 5_3:+46804475 | None:intergenic |
| GAGGCCAGAATTGGTTGCTT+TGG | 0.335656 | 5_3:-46804394 | Msa0814600:CDS |
| AATCAAGGAAATCACATTCT+TGG | 0.339438 | 5_3:-46804904 | Msa0814600:CDS |
| TCAAAGTTAGAAGCTTGATA+TGG | 0.350146 | 5_3:-46802427 | Msa0814600:three_prime_UTR |
| GAGGTAGGTGGTTGCTGCTC+TGG | 0.365877 | 5_3:-46805080 | Msa0814600:five_prime_UTR |
| GACTTCAAATTAGCTTTCTC+GGG | 0.368269 | 5_3:+46803388 | None:intergenic |
| ACCACAAAGACCTTCCTTCC+CGG | 0.369274 | 5_3:-46806212 | Msa0814600:five_prime_UTR |
| TCAGCTTGACTCGGCCAAAA+AGG | 0.370130 | 5_3:-46803566 | Msa0814600:CDS |
| AGAAGCTTGATATGGATATA+AGG | 0.370983 | 5_3:-46802419 | Msa0814600:three_prime_UTR |
| AGACTTCAAATTAGCTTTCT+CGG | 0.376529 | 5_3:+46803387 | None:intergenic |
| ATGGATCTAGGAACAGGAAC+AGG | 0.377562 | 5_3:+46806059 | None:intergenic |
| TTTGATTTCTTTCTTGGAAC+CGG | 0.377775 | 5_3:-46804180 | Msa0814600:CDS |
| TCTGGAAAATGGCTGCTTCT+GGG | 0.385154 | 5_3:-46805062 | Msa0814600:exon |
| AAGAGAAGCGCGAGGCGATC+AGG | 0.385466 | 5_3:-46802913 | Msa0814600:CDS |
| CATCAGTGGTCGTTCGATCT+TGG | 0.388153 | 5_3:-46802594 | Msa0814600:three_prime_UTR |
| CAGTGAAGCAACTTGCGTTT+CGG | 0.398464 | 5_3:+46803636 | None:intergenic |
| GTGGTTGCTGCTCTGGAAAA+TGG | 0.406053 | 5_3:-46805073 | Msa0814600:exon |
| GAGGAGAGAGAGGTTTGGTT+TGG | 0.409019 | 5_3:+46806091 | None:intergenic |
| GATTTACGATGGGTCACGTT+TGG | 0.409430 | 5_3:+46804222 | None:intergenic |
| AATCACTAAAGAAAATCTTA+AGG | 0.409707 | 5_3:-46803662 | Msa0814600:CDS |
| AAGCGTTGATGGTGTGGATA+AGG | 0.410376 | 5_3:-46803734 | Msa0814600:CDS |
| AAGAGCCACTTAGAATTCTT+GGG | 0.412841 | 5_3:+46804860 | None:intergenic |
| TCGCGGAATGGTACTGATCC+AGG | 0.414382 | 5_3:-46804048 | Msa0814600:CDS |
| GGCGAAGAAACTCGAGGAAC+AGG | 0.419693 | 5_3:-46802972 | Msa0814600:CDS |
| TTTATTCTTCTGTTCATCCC+TGG | 0.425227 | 5_3:+46804030 | None:intergenic |
| GAAGTTGAAGGAAGCGTTGA+TGG | 0.429433 | 5_3:-46803745 | Msa0814600:CDS |
| TTACAAGAAGAGGCCAGAAT+TGG | 0.431957 | 5_3:-46804403 | Msa0814600:CDS |
| GGGATACTTGTATTATTATG+TGG | 0.432180 | 5_3:+46806161 | None:intergenic |
| ACCTGAAAGAAAGGTGTGTT+TGG | 0.435570 | 5_3:+46806006 | None:intergenic |
| CCATGTGTAATTCGTTCAAA+TGG | 0.438638 | 5_3:+46803059 | None:intergenic |
| GACTTGAGGAGAGAGAGGTT+TGG | 0.440624 | 5_3:+46806086 | None:intergenic |
| GTCTGAAATGTCAAAGTTGT+TGG | 0.441122 | 5_3:-46803368 | Msa0814600:CDS |
| GTGGAATTTAAAAGAGGTTG+TGG | 0.444884 | 5_3:-46802456 | Msa0814600:three_prime_UTR |
| AGATCCTGCATTCACGCATT+CGG | 0.444892 | 5_3:-46802619 | Msa0814600:three_prime_UTR |
| AGAGGTTAAGCAATGGATCT+AGG | 0.452031 | 5_3:+46806047 | None:intergenic |
| GGTTTGGTTTGGTTTGTATG+TGG | 0.453634 | 5_3:+46806102 | None:intergenic |
| AACTCAAGAGACGGTAGGAT+TGG | 0.454679 | 5_3:-46803094 | Msa0814600:CDS |
| TGGCTCTTTGAAAATCTTGA+AGG | 0.456114 | 5_3:-46804845 | Msa0814600:intron |
| CTTGTATTATTATGTGGGGT+GGG | 0.459189 | 5_3:+46806167 | None:intergenic |
| CTCGGTTGCTTGATTTACGA+TGG | 0.459459 | 5_3:+46804211 | None:intergenic |
| AAATGAAGAGGTTGGAATCA+AGG | 0.459735 | 5_3:-46804919 | Msa0814600:CDS |
| AAATCAAGCAACCGAGCTGC+CGG | 0.462374 | 5_3:-46804204 | Msa0814600:CDS |
| AAGCATAAGAAAGACATTAC+AGG | 0.464420 | 5_3:+46802734 | None:intergenic |
| GGATACTTGTATTATTATGT+GGG | 0.470519 | 5_3:+46806162 | None:intergenic |
| GAGGTTTCAGTTTCATCTAG+TGG | 0.473762 | 5_3:-46803943 | Msa0814600:CDS |
| CTACCGTGGTTACCGATCAT+TGG | 0.475144 | 5_3:-46804361 | Msa0814600:CDS |
| TCATAGATTCCCCGCATTCG+CGG | 0.475457 | 5_3:+46802484 | None:intergenic |
| GCCGGGAAGGAAGGTCTTTG+TGG | 0.477999 | 5_3:+46806211 | None:intergenic |
| TATGGATGTTGGTGTTGAGT+TGG | 0.479532 | 5_3:-46803767 | Msa0814600:CDS |
| TAAGCAATGGATCTAGGAAC+AGG | 0.481194 | 5_3:+46806053 | None:intergenic |
| TTCCCCGCATTCGCGGAGTC+GGG | 0.484345 | 5_3:+46802491 | None:intergenic |
| TTTGGAGAGGGCAAAGTTGA+GGG | 0.486062 | 5_3:+46804240 | None:intergenic |
| AGTTTAGTTACCTGAAAGAA+AGG | 0.487239 | 5_3:+46805997 | None:intergenic |
| ATCTGAGGATTTATTTACCT+CGG | 0.488846 | 5_3:+46803609 | None:intergenic |
| GGAAATCACATTCTTGGTGG+TGG | 0.489138 | 5_3:-46804898 | Msa0814600:CDS |
| GCGAGGTTAAAGAAAAGCTT+TGG | 0.490374 | 5_3:-46803987 | Msa0814600:CDS |
| TATGTGGGGTGGGGACATAT+AGG | 0.496190 | 5_3:+46806177 | None:intergenic |
| GATAATCTTAATGTAGAAGT+AGG | 0.496198 | 5_3:-46803136 | Msa0814600:CDS |
| ACTTGTATTATTATGTGGGG+TGG | 0.497524 | 5_3:+46806166 | None:intergenic |
| CAGACCGGGATCATGAGATC+AGG | 0.498715 | 5_3:-46803453 | Msa0814600:CDS |
| ACAGAGAGAGAACAGCATAA+AGG | 0.502772 | 5_3:-46803197 | Msa0814600:CDS |
| AAGAAGAAATCACTAAACTA+AGG | 0.502918 | 5_3:-46803828 | Msa0814600:CDS |
| TGTCCCGACTCCGCGAATGC+GGG | 0.505984 | 5_3:-46802494 | Msa0814600:three_prime_UTR |
| AGTCGGGACAGTCGCATTCA+CGG | 0.508331 | 5_3:+46802507 | None:intergenic |
| CTTTAACCTCAGAGATGGAC+CGG | 0.508828 | 5_3:-46804494 | Msa0814600:intron |
| AGTGAGGCTGTGTCACCACT+TGG | 0.510418 | 5_3:+46803700 | None:intergenic |
| CAGAAATGTATTACAAGAAG+AGG | 0.510966 | 5_3:-46804413 | Msa0814600:CDS |
| ATTGTCAACATCAGGGTTTG+AGG | 0.511289 | 5_3:-46805102 | Msa0814600:intron |
| AATTTCTGCCTTTAGCAACT+CGG | 0.511577 | 5_3:+46803222 | None:intergenic |
| TGAAAGAGCTGATCAGAGAG+TGG | 0.513671 | 5_3:-46803330 | Msa0814600:CDS |
| AGGACTGCATATTGATGTAA+AGG | 0.514347 | 5_3:-46802358 | Msa0814600:three_prime_UTR |
| CCATTTGAACGAATTACACA+TGG | 0.514635 | 5_3:-46803059 | Msa0814600:CDS |
| GAACGTTACGATCATGTGAC+TGG | 0.515279 | 5_3:-46804336 | Msa0814600:CDS |
| TGATCTCCAATCCCAAGGCT+CGG | 0.516253 | 5_3:-46804289 | Msa0814600:CDS |
| ATTCCCCGCATTCGCGGAGT+CGG | 0.517955 | 5_3:+46802490 | None:intergenic |
| GATCTCCAATCCCAAGGCTC+GGG | 0.520448 | 5_3:-46804288 | Msa0814600:CDS |
| AGATAGAATTCAGCAGCTGC+AGG | 0.520939 | 5_3:-46803590 | Msa0814600:CDS |
| ACTAGTGTGGAATTTAAAAG+AGG | 0.521079 | 5_3:-46802462 | Msa0814600:three_prime_UTR |
| CGATGGGTCACGTTTGGAGA+GGG | 0.521590 | 5_3:+46804228 | None:intergenic |
| CTGGAAAATGGCTGCTTCTG+GGG | 0.522334 | 5_3:-46805061 | Msa0814600:intron |
| CTCTACTATGACGGGTTCTG+AGG | 0.522833 | 5_3:-46804112 | Msa0814600:CDS |
| CGTAACGTTCGGCCAATGAT+CGG | 0.523697 | 5_3:+46804349 | None:intergenic |
| TAAAGACTAGTTTATCAGAC+CGG | 0.526828 | 5_3:-46803468 | Msa0814600:CDS |
| TAGCAAGCAAATGAAGAGGT+TGG | 0.529450 | 5_3:-46804927 | Msa0814600:CDS |
| TATTCAGCTTTCTCGCGGAA+TGG | 0.530197 | 5_3:-46804060 | Msa0814600:CDS |
| GAAAAGCTTTGGACACAGGA+AGG | 0.530581 | 5_3:-46803976 | Msa0814600:CDS |
| GAACAGAAGAATAAACGAGT+TGG | 0.532601 | 5_3:-46804022 | Msa0814600:CDS |
| ATGCAGGATCTAATCACAGC+AGG | 0.537284 | 5_3:+46802631 | None:intergenic |
| TAAAGAAAAGCTTTGGACAC+AGG | 0.537456 | 5_3:-46803980 | Msa0814600:CDS |
| AGTGGTGACACAGCCTCACT+CGG | 0.538297 | 5_3:-46803697 | Msa0814600:CDS |
| GATTCGAGAAATATGGATGT+TGG | 0.539714 | 5_3:-46803778 | Msa0814600:CDS |
| ATATAGGAAAAGAAAGTGGC+CGG | 0.540204 | 5_3:+46806193 | None:intergenic |
| TCGGTTGCTTGATTTACGAT+GGG | 0.540798 | 5_3:+46804212 | None:intergenic |
| ATATAAGGCAAAGCTTGAAA+AGG | 0.541553 | 5_3:-46802404 | Msa0814600:three_prime_UTR |
| AGTAGGTTCACTCAAGGAAG+AGG | 0.544799 | 5_3:-46803119 | Msa0814600:CDS |
| AAGAAAGTGGCCGGGAAGGA+AGG | 0.545466 | 5_3:+46806202 | None:intergenic |
| GTTTGGAGAGGGCAAAGTTG+AGG | 0.545858 | 5_3:+46804239 | None:intergenic |
| AAATGGAACCGAGTTGCTAA+AGG | 0.551194 | 5_3:-46803230 | Msa0814600:CDS |
| CTGTCCCGACTCCGCGAATG+CGG | 0.551210 | 5_3:-46802495 | Msa0814600:three_prime_UTR |
| AATCAAGCAACCGAGCTGCC+GGG | 0.553907 | 5_3:-46804203 | Msa0814600:CDS |
| GGTGTTGAGTTGGAAGTTGA+AGG | 0.555150 | 5_3:-46803757 | Msa0814600:CDS |
| TTTCTGCTCAGCATCAGATA+CGG | 0.557503 | 5_3:+46803417 | None:intergenic |
| CAAGGAAATCACATTCTTGG+TGG | 0.558813 | 5_3:-46804901 | Msa0814600:CDS |
| AAAAGCTTTGGACACAGGAA+GGG | 0.559275 | 5_3:-46803975 | Msa0814600:CDS |
| TGTACAACTGATTTCTGCAA+TGG | 0.559967 | 5_3:-46803032 | Msa0814600:CDS |
| AGTCCCTGATCTCATGATCC+CGG | 0.560226 | 5_3:+46803449 | None:intergenic |
| TCGAAGCTCCTCCCCGAGTG+AGG | 0.560954 | 5_3:+46803684 | None:intergenic |
| AGATGGACCGGAATGTGAAA+CGG | 0.562058 | 5_3:-46804482 | Msa0814600:CDS |
| AGTCACATGATCGTAACGTT+CGG | 0.563685 | 5_3:+46804338 | None:intergenic |
| GATGAGTCCTCTACTATGAC+GGG | 0.566905 | 5_3:-46804120 | Msa0814600:CDS |
| TGAAGGAAGCGTTGATGGTG+TGG | 0.569899 | 5_3:-46803740 | Msa0814600:CDS |
| GGAGAGACTTGAGGAGAGAG+AGG | 0.570685 | 5_3:+46806081 | None:intergenic |
| ATTTCTTTCTTGGAACCGGC+GGG | 0.571280 | 5_3:-46804176 | Msa0814600:CDS |
| GTCCCGACTCCGCGAATGCG+GGG | 0.573756 | 5_3:-46802493 | Msa0814600:three_prime_UTR |
| CGCGGAATGGTACTGATCCA+GGG | 0.575403 | 5_3:-46804047 | Msa0814600:CDS |
| GAAATCACATTCTTGGTGGT+GGG | 0.575639 | 5_3:-46804897 | Msa0814600:CDS |
| GTGGTGACACAGCCTCACTC+GGG | 0.576029 | 5_3:-46803696 | Msa0814600:CDS |
| GAAAGAGCTGATCAGAGAGT+GGG | 0.576449 | 5_3:-46803329 | Msa0814600:CDS |
| TTGTATTATTATGTGGGGTG+GGG | 0.578784 | 5_3:+46806168 | None:intergenic |
| TCCAAGAAAGAAATCAAACC+CGG | 0.581298 | 5_3:+46804185 | None:intergenic |
| TCAATCCGAAAAGATAGAGA+TGG | 0.581551 | 5_3:-46803266 | Msa0814600:CDS |
| AAAGCTTTGGACACAGGAAG+GGG | 0.584862 | 5_3:-46803974 | Msa0814600:CDS |
| TGTTGTTATAATCTGAGTCA+AGG | 0.587678 | 5_3:-46802712 | Msa0814600:three_prime_UTR |
| ATTCTAGCAAGCAAATGAAG+AGG | 0.587841 | 5_3:-46804931 | Msa0814600:CDS |
| GAAGCTGAGAGGTTAAGCAA+TGG | 0.588507 | 5_3:+46806040 | None:intergenic |
| AAAGACTAGTTTATCAGACC+GGG | 0.590629 | 5_3:-46803467 | Msa0814600:CDS |
| AGAAATCAAACCCGGCAGCT+CGG | 0.590735 | 5_3:+46804193 | None:intergenic |
| AGATGAGTCCTCTACTATGA+CGG | 0.591582 | 5_3:-46804121 | Msa0814600:CDS |
| GGATGAATCTGATGATTCAT+CGG | 0.594251 | 5_3:-46804091 | Msa0814600:CDS |
| TGCTCCGAATGCGTGAATGC+AGG | 0.595850 | 5_3:+46802615 | None:intergenic |
| CTCAGAACCCGTCATAGTAG+AGG | 0.596535 | 5_3:+46804113 | None:intergenic |
| GGAAAAGAAAGTGGCCGGGA+AGG | 0.599999 | 5_3:+46806198 | None:intergenic |
| ACTGCATATTGATGTAAAGG+AGG | 0.602626 | 5_3:-46802355 | Msa0814600:three_prime_UTR |
| AACTCGAGGAACAGGTGGAG+AGG | 0.604467 | 5_3:-46802964 | Msa0814600:CDS |
| CGGGGAATCTATGACTAGTG+TGG | 0.606271 | 5_3:-46802475 | Msa0814600:three_prime_UTR |
| ACAATTATTCAGCTTTCTCG+CGG | 0.609429 | 5_3:-46804065 | Msa0814600:CDS |
| ACGATGGGTCACGTTTGGAG+AGG | 0.616774 | 5_3:+46804227 | None:intergenic |
| AGACCGGGATCATGAGATCA+GGG | 0.618190 | 5_3:-46803452 | Msa0814600:CDS |
| TAATGGGAGACAAAGAGTAG+TGG | 0.618477 | 5_3:+46802328 | None:intergenic |
| CAGGAACAGGGAGAGACTTG+AGG | 0.619263 | 5_3:+46806072 | None:intergenic |
| CAATCTGATCTCCAATCCCA+AGG | 0.619499 | 5_3:-46804294 | Msa0814600:CDS |
| TGCAGGATCTAATCACAGCA+GGG | 0.619737 | 5_3:+46802632 | None:intergenic |
| AGCAGCTGAAGAGAAGCGCG+AGG | 0.621012 | 5_3:-46802921 | Msa0814600:CDS |
| CTGCATATTGATGTAAAGGA+GGG | 0.621372 | 5_3:-46802354 | Msa0814600:three_prime_UTR |
| TGTAGAAGTAGGTTCACTCA+AGG | 0.622038 | 5_3:-46803125 | Msa0814600:CDS |
| GATTTCTTTCTTGGAACCGG+CGG | 0.622682 | 5_3:-46804177 | Msa0814600:CDS |
| TATAGGAAAAGAAAGTGGCC+GGG | 0.623100 | 5_3:+46806194 | None:intergenic |
| TCAGGGTTTGAGGAGGTAGG+TGG | 0.624311 | 5_3:-46805092 | Msa0814600:intron |
| GCTGCAGGATCAGCTTGACT+CGG | 0.626858 | 5_3:-46803575 | Msa0814600:CDS |
| CATATCAGACGCATTCCCGC+CGG | 0.628936 | 5_3:+46804161 | None:intergenic |
| GTCAACATCAGGGTTTGAGG+AGG | 0.630741 | 5_3:-46805099 | Msa0814600:intron |
| GATGTTGAAGCTGATAGAAG+AGG | 0.631830 | 5_3:-46804460 | Msa0814600:CDS |
| TCACGCATTCGGAGCATCAG+TGG | 0.631832 | 5_3:-46802608 | Msa0814600:three_prime_UTR |
| CAGCTGCTGAATTCTATCTG+AGG | 0.637838 | 5_3:+46803594 | None:intergenic |
| TCAGTCCCAAGAATTCTAAG+TGG | 0.638403 | 5_3:-46804865 | Msa0814600:CDS |
| AGGTGAACTCAAGAGACGGT+AGG | 0.638743 | 5_3:-46803099 | Msa0814600:CDS |
| ATGAAGTAGAAGAAGCTGAG+AGG | 0.643755 | 5_3:+46806029 | None:intergenic |
| TTGGTTGAAGAGTTCTACCG+TGG | 0.644157 | 5_3:-46804375 | Msa0814600:CDS |
| GATACTTGTATTATTATGTG+GGG | 0.644509 | 5_3:+46806163 | None:intergenic |
| TGGATCTAGGAACAGGAACA+GGG | 0.647082 | 5_3:+46806060 | None:intergenic |
| ACAGGAAGGGGAACATGCAG+AGG | 0.647638 | 5_3:-46803962 | Msa0814600:CDS |
| AGTAGAAGAGATGAAAACAA+AGG | 0.648447 | 5_3:-46802993 | Msa0814600:CDS |
| ACATCAGGGTTTGAGGAGGT+AGG | 0.654611 | 5_3:-46805095 | Msa0814600:intron |
| GAAGAGGTGAACTCAAGAGA+CGG | 0.656685 | 5_3:-46803103 | Msa0814600:CDS |
| GAAGAAACTCGAGGAACAGG+TGG | 0.656748 | 5_3:-46802969 | Msa0814600:CDS |
| ATCAGAGAGTGGGAAAGCCG+CGG | 0.659031 | 5_3:-46803319 | Msa0814600:CDS |
| GGACATATAGGAAAAGAAAG+TGG | 0.663239 | 5_3:+46806189 | None:intergenic |
| GGAGAGGGCAAAGTTGAGGG+CGG | 0.681487 | 5_3:+46804243 | None:intergenic |
| AAGGAATTGTTCGAGCCAAG+TGG | 0.683149 | 5_3:-46803715 | Msa0814600:CDS |
| TGGTGACACAGCCTCACTCG+GGG | 0.683452 | 5_3:-46803695 | Msa0814600:CDS |
| ACTTCAAATTAGCTTTCTCG+GGG | 0.683797 | 5_3:+46803389 | None:intergenic |
| TGACACAGCCTCACTCGGGG+AGG | 0.685440 | 5_3:-46803692 | Msa0814600:CDS |
| ATCATGTGACTGGAGAATTG+CGG | 0.692757 | 5_3:-46804326 | Msa0814600:CDS |
| GTTGGAAAATGAACTGCGCG+AGG | 0.695061 | 5_3:-46804004 | Msa0814600:CDS |
| AACTTCAAGAAAGACTTGCG+AGG | 0.705338 | 5_3:-46803492 | Msa0814600:CDS |
| AACAAAGGCGAAGAAACTCG+AGG | 0.715395 | 5_3:-46802978 | Msa0814600:CDS |
| GCTCTTCAAATGATCGACCG+CGG | 0.720469 | 5_3:+46803302 | None:intergenic |
| CGGCCAATGATCGGTAACCA+CGG | 0.730068 | 5_3:+46804358 | None:intergenic |
| AGTTGCTTCACTGAAAACCG+AGG | 0.737756 | 5_3:-46803626 | Msa0814600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAAGTGATT+TGG | + | chr5_3:46802585-46802604 | None:intergenic | 10.0% |
| !! | TTAGATTTATACTAATTATT+AGG | + | chr5_3:46805747-46805766 | None:intergenic | 10.0% |
| !! | ATAGAATGTTAATTATCTTT+AGG | - | chr5_3:46804005-46804024 | Msa0814600:CDS | 15.0% |
| !!! | TAAAGATAATTTTGTCAAAA+CGG | + | chr5_3:46804034-46804053 | None:intergenic | 15.0% |
| !! | CATTATCTTATTGTAAAATT+AGG | - | chr5_3:46806165-46806184 | Msa0814600:five_prime_UTR | 15.0% |
| !! | AAAAATATGAAGATGTTGAA+GGG | + | chr5_3:46802405-46802424 | None:intergenic | 20.0% |
| !! | TAAAAATATGAAGATGTTGA+AGG | + | chr5_3:46802406-46802425 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTTTCTTTATGAA+AGG | + | chr5_3:46802793-46802812 | None:intergenic | 20.0% |
| !! | AATTAAATGTTACATCAATG+TGG | + | chr5_3:46803347-46803366 | None:intergenic | 20.0% |
| !!! | AATTAACTTGCACATAATAA+TGG | - | chr5_3:46803564-46803583 | Msa0814600:CDS | 20.0% |
| !!! | CTACTTTAAAACTTTTTTGT+TGG | - | chr5_3:46803979-46803998 | Msa0814600:CDS | 20.0% |
| !! | AATCACTAAAGAAAATCTTA+AGG | - | chr5_3:46804881-46804900 | Msa0814600:CDS | 20.0% |
| !!! | TGATGGTTTTAATTTGAATT+CGG | - | chr5_3:46805885-46805904 | Msa0814600:intron | 20.0% |
| !!! | CTGTATTTATTGCATTTTTT+TGG | + | chr5_3:46805976-46805995 | None:intergenic | 20.0% |
| ! | GATACTTGTATTATTATGTG+GGG | + | chr5_3:46802383-46802402 | None:intergenic | 25.0% |
| ! | GGATACTTGTATTATTATGT+GGG | + | chr5_3:46802384-46802403 | None:intergenic | 25.0% |
| !! | ATACAAAAACAGCTGAATTT+TGG | + | chr5_3:46802609-46802628 | None:intergenic | 25.0% |
| !! | ATTATCTTTGAGAAACAACT+GGG | + | chr5_3:46803046-46803065 | None:intergenic | 25.0% |
| !! | TATTATCTTTGAGAAACAAC+TGG | + | chr5_3:46803047-46803066 | None:intergenic | 25.0% |
| !! | TTGTCTAAGTCTTTTCATTT+TGG | - | chr5_3:46803283-46803302 | Msa0814600:CDS | 25.0% |
| !! | TGTCTAAGTCTTTTCATTTT+GGG | - | chr5_3:46803284-46803303 | Msa0814600:CDS | 25.0% |
| ! | GACAATAATAAACACAAAAC+AGG | + | chr5_3:46803427-46803446 | None:intergenic | 25.0% |
| ! | TGTTTATTATTGTCAACATC+AGG | - | chr5_3:46803433-46803452 | Msa0814600:CDS | 25.0% |
| ! | GTTTATTATTGTCAACATCA+GGG | - | chr5_3:46803434-46803453 | Msa0814600:CDS | 25.0% |
| !!! | GTAATACATTTCTGCTTTTT+TGG | + | chr5_3:46804124-46804143 | None:intergenic | 25.0% |
| !! | TTGTTCGTATGCATTAATTT+TGG | + | chr5_3:46804658-46804677 | None:intergenic | 25.0% |
| ! | AAGAAGAAATCACTAAACTA+AGG | - | chr5_3:46804715-46804734 | Msa0814600:intron | 25.0% |
| !!! | TCTCTAGTTTTAAGTTATCA+AGG | + | chr5_3:46805385-46805404 | None:intergenic | 25.0% |
| ! | GATAATCTTAATGTAGAAGT+AGG | - | chr5_3:46805407-46805426 | Msa0814600:intron | 25.0% |
| !! | ATGCTTAAGCAACATTTTAT+AGG | - | chr5_3:46805695-46805714 | Msa0814600:intron | 25.0% |
| !! | TGCTTAAGCAACATTTTATA+GGG | - | chr5_3:46805696-46805715 | Msa0814600:intron | 25.0% |
| !!! | AAGTGATAAAGATGTTTTGA+TGG | - | chr5_3:46805868-46805887 | Msa0814600:intron | 25.0% |
| ! | CAAAATACCAAGATTGAATT+TGG | - | chr5_3:46806010-46806029 | Msa0814600:five_prime_UTR | 25.0% |
| GGGATACTTGTATTATTATG+TGG | + | chr5_3:46802385-46802404 | None:intergenic | 30.0% | |
| AGTTTAGTTACCTGAAAGAA+AGG | + | chr5_3:46802549-46802568 | None:intergenic | 30.0% | |
| AAATGAAATCCCTTGTCATA+TGG | - | chr5_3:46802692-46802711 | Msa0814600:three_prime_UTR | 30.0% | |
| AGATAAGAACCATATGACAA+GGG | + | chr5_3:46802704-46802723 | None:intergenic | 30.0% | |
| AAGATAAGAACCATATGACA+AGG | + | chr5_3:46802705-46802724 | None:intergenic | 30.0% | |
| TTTGTCGAAAAATCCAAAAC+TGG | + | chr5_3:46802761-46802780 | None:intergenic | 30.0% | |
| AACTTGCACATAATAATGGT+TGG | - | chr5_3:46803568-46803587 | Msa0814600:CDS | 30.0% | |
| AATCAAGGAAATCACATTCT+TGG | - | chr5_3:46803639-46803658 | Msa0814600:CDS | 30.0% | |
| TATTACTTTAATCGCCTTCT+TGG | - | chr5_3:46803866-46803885 | Msa0814600:CDS | 30.0% | |
| ATTACTTTAATCGCCTTCTT+GGG | - | chr5_3:46803867-46803886 | Msa0814600:CDS | 30.0% | |
| AAACTCTTCAACTTGTATGT+CGG | - | chr5_3:46803911-46803930 | Msa0814600:CDS | 30.0% | |
| ATTATCTTTAACCTCAGAGA+TGG | - | chr5_3:46804044-46804063 | Msa0814600:CDS | 30.0% | |
| CAGAAATGTATTACAAGAAG+AGG | - | chr5_3:46804130-46804149 | Msa0814600:CDS | 30.0% | |
| ! | TTTGATTTCTTTCTTGGAAC+CGG | - | chr5_3:46804363-46804382 | Msa0814600:CDS | 30.0% |
| !! | AATTTTGGCATAAACATCGT+CGG | + | chr5_3:46804643-46804662 | None:intergenic | 30.0% |
| ATCCTTAGATTCGAGAAATA+TGG | - | chr5_3:46804758-46804777 | Msa0814600:intron | 30.0% | |
| ATCCATATTTCTCGAATCTA+AGG | + | chr5_3:46804763-46804782 | None:intergenic | 30.0% | |
| ATCTGAGGATTTATTTACCT+CGG | + | chr5_3:46804937-46804956 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTCGCTGTTGAATT+TGG | + | chr5_3:46805021-46805040 | None:intergenic | 30.0% |
| !! | TAAAGACTAGTTTATCAGAC+CGG | - | chr5_3:46805075-46805094 | Msa0814600:exon | 30.0% |
| !! | AGACTTCAAATTAGCTTTCT+CGG | + | chr5_3:46805159-46805178 | None:intergenic | 30.0% |
| ATGGAAGCAGAATTGAAAAA+TGG | - | chr5_3:46805296-46805315 | Msa0814600:intron | 30.0% | |
| AGTAGAAGAGATGAAAACAA+AGG | - | chr5_3:46805550-46805569 | Msa0814600:intron | 30.0% | |
| ! | AACATTTTATAGGGCATAAG+AGG | - | chr5_3:46805705-46805724 | Msa0814600:intron | 30.0% |
| ! | ACATTTTATAGGGCATAAGA+GGG | - | chr5_3:46805706-46805725 | Msa0814600:intron | 30.0% |
| AATTATTAGGCAGCCAAAAT+TGG | + | chr5_3:46805734-46805753 | None:intergenic | 30.0% | |
| AAGCATAAGAAAGACATTAC+AGG | + | chr5_3:46805812-46805831 | None:intergenic | 30.0% | |
| TGTTGTTATAATCTGAGTCA+AGG | - | chr5_3:46805831-46805850 | Msa0814600:intron | 30.0% | |
| ACTAGTGTGGAATTTAAAAG+AGG | - | chr5_3:46806081-46806100 | Msa0814600:five_prime_UTR | 30.0% | |
| TCAAAGTTAGAAGCTTGATA+TGG | - | chr5_3:46806116-46806135 | Msa0814600:five_prime_UTR | 30.0% | |
| AGAAGCTTGATATGGATATA+AGG | - | chr5_3:46806124-46806143 | Msa0814600:five_prime_UTR | 30.0% | |
| ATATAAGGCAAAGCTTGAAA+AGG | - | chr5_3:46806139-46806158 | Msa0814600:five_prime_UTR | 30.0% | |
| ATATAGGAAAAGAAAGTGGC+CGG | + | chr5_3:46802353-46802372 | None:intergenic | 35.0% | |
| GGACATATAGGAAAAGAAAG+TGG | + | chr5_3:46802357-46802376 | None:intergenic | 35.0% | |
| TTGTATTATTATGTGGGGTG+GGG | + | chr5_3:46802378-46802397 | None:intergenic | 35.0% | |
| CTTGTATTATTATGTGGGGT+GGG | + | chr5_3:46802379-46802398 | None:intergenic | 35.0% | |
| ACTTGTATTATTATGTGGGG+TGG | + | chr5_3:46802380-46802399 | None:intergenic | 35.0% | |
| ! | TCCTAAGAAAACACCAGTTT+TGG | - | chr5_3:46802745-46802764 | Msa0814600:three_prime_UTR | 35.0% |
| ! | TCCAAAACTGGTGTTTTCTT+AGG | + | chr5_3:46802749-46802768 | None:intergenic | 35.0% |
| ! | TTTCAACGCACTCTCTTTTT+CGG | - | chr5_3:46803116-46803135 | Msa0814600:CDS | 35.0% |
| !! | GTTGGCTGTTTTGTTATCTT+AGG | - | chr5_3:46803586-46803605 | Msa0814600:CDS | 35.0% |
| ATTCTAGCAAGCAAATGAAG+AGG | - | chr5_3:46803612-46803631 | Msa0814600:CDS | 35.0% | |
| AAATGAAGAGGTTGGAATCA+AGG | - | chr5_3:46803624-46803643 | Msa0814600:CDS | 35.0% | |
| AAGAGCCACTTAGAATTCTT+GGG | + | chr5_3:46803686-46803705 | None:intergenic | 35.0% | |
| AAAGAGCCACTTAGAATTCT+TGG | + | chr5_3:46803687-46803706 | None:intergenic | 35.0% | |
| ! | TGGCTCTTTGAAAATCTTGA+AGG | - | chr5_3:46803698-46803717 | Msa0814600:CDS | 35.0% |
| TTACTTTAATCGCCTTCTTG+GGG | - | chr5_3:46803868-46803887 | Msa0814600:CDS | 35.0% | |
| GCAATGGAGTTTCATAATTC+TGG | - | chr5_3:46803940-46803959 | Msa0814600:CDS | 35.0% | |
| TCCAAGAAAGAAATCAAACC+CGG | + | chr5_3:46804361-46804380 | None:intergenic | 35.0% | |
| TCTGATATGAGCCAAAAAGA+CGG | - | chr5_3:46804396-46804415 | Msa0814600:CDS | 35.0% | |
| GGATGAATCTGATGATTCAT+CGG | - | chr5_3:46804452-46804471 | Msa0814600:CDS | 35.0% | |
| ACAATTATTCAGCTTTCTCG+CGG | - | chr5_3:46804478-46804497 | Msa0814600:CDS | 35.0% | |
| TTTATTCTTCTGTTCATCCC+TGG | + | chr5_3:46804516-46804535 | None:intergenic | 35.0% | |
| GAACAGAAGAATAAACGAGT+TGG | - | chr5_3:46804521-46804540 | Msa0814600:intron | 35.0% | |
| !! | TAAAGAAAAGCTTTGGACAC+AGG | - | chr5_3:46804563-46804582 | Msa0814600:intron | 35.0% |
| GATTCGAGAAATATGGATGT+TGG | - | chr5_3:46804765-46804784 | Msa0814600:intron | 35.0% | |
| !! | AAAGACTAGTTTATCAGACC+GGG | - | chr5_3:46805076-46805095 | Msa0814600:exon | 35.0% |
| !! | ACTTCAAATTAGCTTTCTCG+GGG | + | chr5_3:46805157-46805176 | None:intergenic | 35.0% |
| !! | GACTTCAAATTAGCTTTCTC+GGG | + | chr5_3:46805158-46805177 | None:intergenic | 35.0% |
| ! | GTCTGAAATGTCAAAGTTGT+TGG | - | chr5_3:46805175-46805194 | Msa0814600:intron | 35.0% |
| TCAATCCGAAAAGATAGAGA+TGG | - | chr5_3:46805277-46805296 | Msa0814600:intron | 35.0% | |
| ! | TGCTTCCATCTCTATCTTTT+CGG | + | chr5_3:46805285-46805304 | None:intergenic | 35.0% |
| AATTTCTGCCTTTAGCAACT+CGG | + | chr5_3:46805324-46805343 | None:intergenic | 35.0% | |
| CCATGTGTAATTCGTTCAAA+TGG | + | chr5_3:46805487-46805506 | None:intergenic | 35.0% | |
| CCATTTGAACGAATTACACA+TGG | - | chr5_3:46805484-46805503 | Msa0814600:intron | 35.0% | |
| ! | TGTACAACTGATTTCTGCAA+TGG | - | chr5_3:46805511-46805530 | Msa0814600:intron | 35.0% |
| GTGGAATTTAAAAGAGGTTG+TGG | - | chr5_3:46806087-46806106 | Msa0814600:five_prime_UTR | 35.0% | |
| AGGACTGCATATTGATGTAA+AGG | - | chr5_3:46806185-46806204 | Msa0814600:five_prime_UTR | 35.0% | |
| ACTGCATATTGATGTAAAGG+AGG | - | chr5_3:46806188-46806207 | Msa0814600:five_prime_UTR | 35.0% | |
| CTGCATATTGATGTAAAGGA+GGG | - | chr5_3:46806189-46806208 | Msa0814600:five_prime_UTR | 35.0% | |
| TATAGGAAAAGAAAGTGGCC+GGG | + | chr5_3:46802352-46802371 | None:intergenic | 40.0% | |
| !! | GGTTTGGTTTGGTTTGTATG+TGG | + | chr5_3:46802444-46802463 | None:intergenic | 40.0% |
| TAAGCAATGGATCTAGGAAC+AGG | + | chr5_3:46802493-46802512 | None:intergenic | 40.0% | |
| AGAGGTTAAGCAATGGATCT+AGG | + | chr5_3:46802499-46802518 | None:intergenic | 40.0% | |
| ATGAAGTAGAAGAAGCTGAG+AGG | + | chr5_3:46802517-46802536 | None:intergenic | 40.0% | |
| TCCAAACACACCTTTCTTTC+AGG | - | chr5_3:46802536-46802555 | Msa0814600:intron | 40.0% | |
| ! | ACCTGAAAGAAAGGTGTGTT+TGG | + | chr5_3:46802540-46802559 | None:intergenic | 40.0% |
| ! | AAACGTGGTTGTTGACTAGT+TGG | + | chr5_3:46802971-46802990 | None:intergenic | 40.0% |
| ! | ACTAGTCAACAACCACGTTT+TGG | - | chr5_3:46802971-46802990 | Msa0814600:CDS | 40.0% |
| TGATTACGTGATATGACACG+TGG | - | chr5_3:46802999-46803018 | Msa0814600:CDS | 40.0% | |
| ! | AAGTCTTTTCATTTTGGGCC+TGG | - | chr5_3:46803289-46803308 | Msa0814600:CDS | 40.0% |
| ! | AGTCTTTTCATTTTGGGCCT+GGG | - | chr5_3:46803290-46803309 | Msa0814600:CDS | 40.0% |
| ATTGTCAACATCAGGGTTTG+AGG | - | chr5_3:46803441-46803460 | Msa0814600:CDS | 40.0% | |
| TAGCAAGCAAATGAAGAGGT+TGG | - | chr5_3:46803616-46803635 | Msa0814600:CDS | 40.0% | |
| CAAGGAAATCACATTCTTGG+TGG | - | chr5_3:46803642-46803661 | Msa0814600:CDS | 40.0% | |
| ! | GAAATCACATTCTTGGTGGT+GGG | - | chr5_3:46803646-46803665 | Msa0814600:CDS | 40.0% |
| TCAGTCCCAAGAATTCTAAG+TGG | - | chr5_3:46803678-46803697 | Msa0814600:CDS | 40.0% | |
| !! | TGAGTTTGTTAATGCATGCC+TGG | - | chr5_3:46803779-46803798 | Msa0814600:CDS | 40.0% |
| !! | GAGTTTGTTAATGCATGCCT+GGG | - | chr5_3:46803780-46803799 | Msa0814600:CDS | 40.0% |
| CTGTGAGATTGTCAGAATCA+CGG | - | chr5_3:46803807-46803826 | Msa0814600:CDS | 40.0% | |
| CAACTATACCAAAACCTCAG+AGG | + | chr5_3:46803837-46803856 | None:intergenic | 40.0% | |
| AATCACAAATCTCCCCAAGA+AGG | + | chr5_3:46803883-46803902 | None:intergenic | 40.0% | |
| TCAACTTGTATGTCGGTAAC+TGG | - | chr5_3:46803918-46803937 | Msa0814600:CDS | 40.0% | |
| TCAACATCCGTTTCACATTC+CGG | + | chr5_3:46804071-46804090 | None:intergenic | 40.0% | |
| GATGTTGAAGCTGATAGAAG+AGG | - | chr5_3:46804083-46804102 | Msa0814600:CDS | 40.0% | |
| TTACAAGAAGAGGCCAGAAT+TGG | - | chr5_3:46804140-46804159 | Msa0814600:CDS | 40.0% | |
| TCAACCAAAGCAACCAATTC+TGG | + | chr5_3:46804156-46804175 | None:intergenic | 40.0% | |
| AGTCACATGATCGTAACGTT+CGG | + | chr5_3:46804208-46804227 | None:intergenic | 40.0% | |
| ATCATGTGACTGGAGAATTG+CGG | - | chr5_3:46804217-46804236 | Msa0814600:CDS | 40.0% | |
| TCGGTTGCTTGATTTACGAT+GGG | + | chr5_3:46804334-46804353 | None:intergenic | 40.0% | |
| ! | ACTCATCTTCTCCGTCTTTT+TGG | + | chr5_3:46804410-46804429 | None:intergenic | 40.0% |
| AGATGAGTCCTCTACTATGA+CGG | - | chr5_3:46804422-46804441 | Msa0814600:CDS | 40.0% | |
| GCGAGGTTAAAGAAAAGCTT+TGG | - | chr5_3:46804556-46804575 | Msa0814600:intron | 40.0% | |
| !! | AAAAGCTTTGGACACAGGAA+GGG | - | chr5_3:46804568-46804587 | Msa0814600:intron | 40.0% |
| GAGGTTTCAGTTTCATCTAG+TGG | - | chr5_3:46804600-46804619 | Msa0814600:intron | 40.0% | |
| !! | TATGGATGTTGGTGTTGAGT+TGG | - | chr5_3:46804776-46804795 | Msa0814600:intron | 40.0% |
| ! | CCAAGTAGCAACATCCTTTT+TGG | + | chr5_3:46804994-46805013 | None:intergenic | 40.0% |
| CCAAAAAGGATGTTGCTACT+TGG | - | chr5_3:46804991-46805010 | Msa0814600:intron | 40.0% | |
| AACTTCAAGAAAGACTTGCG+AGG | - | chr5_3:46805051-46805070 | Msa0814600:intron | 40.0% | |
| TTTCTGCTCAGCATCAGATA+CGG | + | chr5_3:46805129-46805148 | None:intergenic | 40.0% | |
| AAATGGAACCGAGTTGCTAA+AGG | - | chr5_3:46805313-46805332 | Msa0814600:intron | 40.0% | |
| ACAGAGAGAGAACAGCATAA+AGG | - | chr5_3:46805346-46805365 | Msa0814600:intron | 40.0% | |
| TGTAGAAGTAGGTTCACTCA+AGG | - | chr5_3:46805418-46805437 | Msa0814600:intron | 40.0% | |
| ! | GCATAAGAGGGTTCCAATTT+TGG | - | chr5_3:46805718-46805737 | Msa0814600:intron | 40.0% |
| ACGGAGTCCAAATTCAATCT+TGG | + | chr5_3:46806020-46806039 | None:intergenic | 40.0% | |
| TGGATCTAGGAACAGGAACA+GGG | + | chr5_3:46802486-46802505 | None:intergenic | 45.0% | |
| ATGGATCTAGGAACAGGAAC+AGG | + | chr5_3:46802487-46802506 | None:intergenic | 45.0% | |
| GAAGCTGAGAGGTTAAGCAA+TGG | + | chr5_3:46802506-46802525 | None:intergenic | 45.0% | |
| !!! | TCAACAACCACGTTTTGGAG+CGG | - | chr5_3:46802976-46802995 | Msa0814600:CDS | 45.0% |
| AATGTGGACCACACCTACAT+GGG | + | chr5_3:46803331-46803350 | None:intergenic | 45.0% | |
| TCTGGAAAATGGCTGCTTCT+GGG | - | chr5_3:46803481-46803500 | Msa0814600:CDS | 45.0% | |
| !! | TGCTTCTGGGGTAAGTGTTA+TGG | - | chr5_3:46803494-46803513 | Msa0814600:CDS | 45.0% |
| GGAAATCACATTCTTGGTGG+TGG | - | chr5_3:46803645-46803664 | Msa0814600:CDS | 45.0% | |
| GACAATCTCACAGTAAACCC+AGG | + | chr5_3:46803800-46803819 | None:intergenic | 45.0% | |
| TGTATGTCGGTAACTGGCAA+TGG | - | chr5_3:46803924-46803943 | Msa0814600:CDS | 45.0% | |
| CTTTAACCTCAGAGATGGAC+CGG | - | chr5_3:46804049-46804068 | Msa0814600:CDS | 45.0% | |
| AGATGGACCGGAATGTGAAA+CGG | - | chr5_3:46804061-46804080 | Msa0814600:CDS | 45.0% | |
| TTGGTTGAAGAGTTCTACCG+TGG | - | chr5_3:46804168-46804187 | Msa0814600:CDS | 45.0% | |
| GAACGTTACGATCATGTGAC+TGG | - | chr5_3:46804207-46804226 | Msa0814600:CDS | 45.0% | |
| CAATCTGATCTCCAATCCCA+AGG | - | chr5_3:46804249-46804268 | Msa0814600:CDS | 45.0% | |
| TTTGGAGAGGGCAAAGTTGA+GGG | + | chr5_3:46804306-46804325 | None:intergenic | 45.0% | |
| GATTTACGATGGGTCACGTT+TGG | + | chr5_3:46804324-46804343 | None:intergenic | 45.0% | |
| CTCGGTTGCTTGATTTACGA+TGG | + | chr5_3:46804335-46804354 | None:intergenic | 45.0% | |
| ! | GCCGGGTTTGATTTCTTTCT+TGG | - | chr5_3:46804357-46804376 | Msa0814600:CDS | 45.0% |
| GATTTCTTTCTTGGAACCGG+CGG | - | chr5_3:46804366-46804385 | Msa0814600:CDS | 45.0% | |
| ATTTCTTTCTTGGAACCGGC+GGG | - | chr5_3:46804367-46804386 | Msa0814600:CDS | 45.0% | |
| GATGAGTCCTCTACTATGAC+GGG | - | chr5_3:46804423-46804442 | Msa0814600:CDS | 45.0% | |
| TATTCAGCTTTCTCGCGGAA+TGG | - | chr5_3:46804483-46804502 | Msa0814600:CDS | 45.0% | |
| !! | GAAAAGCTTTGGACACAGGA+AGG | - | chr5_3:46804567-46804586 | Msa0814600:intron | 45.0% |
| !! | AAAGCTTTGGACACAGGAAG+GGG | - | chr5_3:46804569-46804588 | Msa0814600:intron | 45.0% |
| !! | GGTGTTGAGTTGGAAGTTGA+AGG | - | chr5_3:46804786-46804805 | Msa0814600:intron | 45.0% |
| !! | GAAGTTGAAGGAAGCGTTGA+TGG | - | chr5_3:46804798-46804817 | Msa0814600:intron | 45.0% |
| !! | AAGCGTTGATGGTGTGGATA+AGG | - | chr5_3:46804809-46804828 | Msa0814600:intron | 45.0% |
| AAGGAATTGTTCGAGCCAAG+TGG | - | chr5_3:46804828-46804847 | Msa0814600:intron | 45.0% | |
| CAGTGAAGCAACTTGCGTTT+CGG | + | chr5_3:46804910-46804929 | None:intergenic | 45.0% | |
| AGTTGCTTCACTGAAAACCG+AGG | - | chr5_3:46804917-46804936 | Msa0814600:CDS | 45.0% | |
| CAGCTGCTGAATTCTATCTG+AGG | + | chr5_3:46804952-46804971 | None:intergenic | 45.0% | |
| AGATAGAATTCAGCAGCTGC+AGG | - | chr5_3:46804953-46804972 | Msa0814600:intron | 45.0% | |
| TGAAAGAGCTGATCAGAGAG+TGG | - | chr5_3:46805213-46805232 | Msa0814600:intron | 45.0% | |
| GAAAGAGCTGATCAGAGAGT+GGG | - | chr5_3:46805214-46805233 | Msa0814600:intron | 45.0% | |
| AGTAGGTTCACTCAAGGAAG+AGG | - | chr5_3:46805424-46805443 | Msa0814600:intron | 45.0% | |
| GAAGAGGTGAACTCAAGAGA+CGG | - | chr5_3:46805440-46805459 | Msa0814600:intron | 45.0% | |
| AACTCAAGAGACGGTAGGAT+TGG | - | chr5_3:46805449-46805468 | Msa0814600:intron | 45.0% | |
| AACAAAGGCGAAGAAACTCG+AGG | - | chr5_3:46805565-46805584 | Msa0814600:intron | 45.0% | |
| TGCAGGATCTAATCACAGCA+GGG | + | chr5_3:46805914-46805933 | None:intergenic | 45.0% | |
| ATGCAGGATCTAATCACAGC+AGG | + | chr5_3:46805915-46805934 | None:intergenic | 45.0% | |
| AGATCCTGCATTCACGCATT+CGG | - | chr5_3:46805924-46805943 | Msa0814600:intron | 45.0% | |
| !! | AAGATAATAATAATATAAAA+TGG | - | chr5_3:46803058-46803077 | Msa0814600:CDS | 5.0% |
| TATGTGGGGTGGGGACATAT+AGG | + | chr5_3:46802369-46802388 | None:intergenic | 50.0% | |
| ! | GAGGAGAGAGAGGTTTGGTT+TGG | + | chr5_3:46802455-46802474 | None:intergenic | 50.0% |
| GACTTGAGGAGAGAGAGGTT+TGG | + | chr5_3:46802460-46802479 | None:intergenic | 50.0% | |
| GTAATCACCGCTCCAAAACG+TGG | + | chr5_3:46802986-46803005 | None:intergenic | 50.0% | |
| AGTGGAATACAGGCCCATGT+AGG | - | chr5_3:46803315-46803334 | Msa0814600:CDS | 50.0% | |
| AATACAGGCCCATGTAGGTG+TGG | - | chr5_3:46803320-46803339 | Msa0814600:CDS | 50.0% | |
| CAATGTGGACCACACCTACA+TGG | + | chr5_3:46803332-46803351 | None:intergenic | 50.0% | |
| GTCAACATCAGGGTTTGAGG+AGG | - | chr5_3:46803444-46803463 | Msa0814600:CDS | 50.0% | |
| ACATCAGGGTTTGAGGAGGT+AGG | - | chr5_3:46803448-46803467 | Msa0814600:CDS | 50.0% | |
| !! | GTGGTTGCTGCTCTGGAAAA+TGG | - | chr5_3:46803470-46803489 | Msa0814600:CDS | 50.0% |
| ! | CTCTGGAAAATGGCTGCTTC+TGG | - | chr5_3:46803480-46803499 | Msa0814600:CDS | 50.0% |
| CTGGAAAATGGCTGCTTCTG+GGG | - | chr5_3:46803482-46803501 | Msa0814600:CDS | 50.0% | |
| GAGGCCAGAATTGGTTGCTT+TGG | - | chr5_3:46804149-46804168 | Msa0814600:CDS | 50.0% | |
| CTACCGTGGTTACCGATCAT+TGG | - | chr5_3:46804182-46804201 | Msa0814600:CDS | 50.0% | |
| CGTAACGTTCGGCCAATGAT+CGG | + | chr5_3:46804197-46804216 | None:intergenic | 50.0% | |
| TGATCTCCAATCCCAAGGCT+CGG | - | chr5_3:46804254-46804273 | Msa0814600:CDS | 50.0% | |
| AAAAACCCGAGCCTTGGGAT+TGG | + | chr5_3:46804263-46804282 | None:intergenic | 50.0% | |
| GTCTGAAAAACCCGAGCCTT+GGG | + | chr5_3:46804268-46804287 | None:intergenic | 50.0% | |
| TGTCTGAAAAACCCGAGCCT+TGG | + | chr5_3:46804269-46804288 | None:intergenic | 50.0% | |
| GTTTGGAGAGGGCAAAGTTG+AGG | + | chr5_3:46804307-46804326 | None:intergenic | 50.0% | |
| AAATCAAGCAACCGAGCTGC+CGG | - | chr5_3:46804339-46804358 | Msa0814600:CDS | 50.0% | |
| AGAAATCAAACCCGGCAGCT+CGG | + | chr5_3:46804353-46804372 | None:intergenic | 50.0% | |
| CTCAGAACCCGTCATAGTAG+AGG | + | chr5_3:46804433-46804452 | None:intergenic | 50.0% | |
| !! | CTCTACTATGACGGGTTCTG+AGG | - | chr5_3:46804431-46804450 | Msa0814600:CDS | 50.0% |
| GTTGGAAAATGAACTGCGCG+AGG | - | chr5_3:46804539-46804558 | Msa0814600:intron | 50.0% | |
| !! | TGAAGGAAGCGTTGATGGTG+TGG | - | chr5_3:46804803-46804822 | Msa0814600:intron | 50.0% |
| !! | TCAGCTTGACTCGGCCAAAA+AGG | - | chr5_3:46804977-46804996 | Msa0814600:intron | 50.0% |
| AGACCGGGATCATGAGATCA+GGG | - | chr5_3:46805091-46805110 | Msa0814600:five_prime_UTR | 50.0% | |
| AGTCCCTGATCTCATGATCC+CGG | + | chr5_3:46805097-46805116 | None:intergenic | 50.0% | |
| GCTCTTCAAATGATCGACCG+CGG | + | chr5_3:46805244-46805263 | None:intergenic | 50.0% | |
| AGGTGAACTCAAGAGACGGT+AGG | - | chr5_3:46805444-46805463 | Msa0814600:intron | 50.0% | |
| GAAGAAACTCGAGGAACAGG+TGG | - | chr5_3:46805574-46805593 | Msa0814600:intron | 50.0% | |
| CATCAGTGGTCGTTCGATCT+TGG | - | chr5_3:46805949-46805968 | Msa0814600:intron | 50.0% | |
| TCATAGATTCCCCGCATTCG+CGG | + | chr5_3:46806062-46806081 | None:intergenic | 50.0% | |
| CGGGGAATCTATGACTAGTG+TGG | - | chr5_3:46806068-46806087 | Msa0814600:five_prime_UTR | 50.0% | |
| AAGAAAGTGGCCGGGAAGGA+AGG | + | chr5_3:46802344-46802363 | None:intergenic | 55.0% | |
| GGAAAAGAAAGTGGCCGGGA+AGG | + | chr5_3:46802348-46802367 | None:intergenic | 55.0% | |
| GGAGAGACTTGAGGAGAGAG+AGG | + | chr5_3:46802465-46802484 | None:intergenic | 55.0% | |
| CAGGAACAGGGAGAGACTTG+AGG | + | chr5_3:46802474-46802493 | None:intergenic | 55.0% | |
| ! | TCATTTTGGGCCTGGGTCAG+TGG | - | chr5_3:46803297-46803316 | Msa0814600:CDS | 55.0% |
| TCAGGGTTTGAGGAGGTAGG+TGG | - | chr5_3:46803451-46803470 | Msa0814600:CDS | 55.0% | |
| AGAATCACGGTGAGCCTCTG+AGG | - | chr5_3:46803820-46803839 | Msa0814600:CDS | 55.0% | |
| !!! | ACGGTGAGCCTCTGAGGTTT+TGG | - | chr5_3:46803826-46803845 | Msa0814600:CDS | 55.0% |
| CACATTCCGGTCCATCTCTG+AGG | + | chr5_3:46804058-46804077 | None:intergenic | 55.0% | |
| CGGCCAATGATCGGTAACCA+CGG | + | chr5_3:46804188-46804207 | None:intergenic | 55.0% | |
| GATCTCCAATCCCAAGGCTC+GGG | - | chr5_3:46804255-46804274 | Msa0814600:CDS | 55.0% | |
| !! | GGCTCGGGTTTTTCAGACAC+TGG | - | chr5_3:46804270-46804289 | Msa0814600:CDS | 55.0% |
| CGATGGGTCACGTTTGGAGA+GGG | + | chr5_3:46804318-46804337 | None:intergenic | 55.0% | |
| ACGATGGGTCACGTTTGGAG+AGG | + | chr5_3:46804319-46804338 | None:intergenic | 55.0% | |
| AATCAAGCAACCGAGCTGCC+GGG | - | chr5_3:46804340-46804359 | Msa0814600:CDS | 55.0% | |
| CATATCAGACGCATTCCCGC+CGG | + | chr5_3:46804385-46804404 | None:intergenic | 55.0% | |
| !! | TCGCGGAATGGTACTGATCC+AGG | - | chr5_3:46804495-46804514 | Msa0814600:intron | 55.0% |
| !! | CGCGGAATGGTACTGATCCA+GGG | - | chr5_3:46804496-46804515 | Msa0814600:intron | 55.0% |
| ACAGGAAGGGGAACATGCAG+AGG | - | chr5_3:46804581-46804600 | Msa0814600:intron | 55.0% | |
| AGTGAGGCTGTGTCACCACT+TGG | + | chr5_3:46804846-46804865 | None:intergenic | 55.0% | |
| AGTGGTGACACAGCCTCACT+CGG | - | chr5_3:46804846-46804865 | Msa0814600:CDS | 55.0% | |
| GCTGCAGGATCAGCTTGACT+CGG | - | chr5_3:46804968-46804987 | Msa0814600:intron | 55.0% | |
| CAGACCGGGATCATGAGATC+AGG | - | chr5_3:46805090-46805109 | Msa0814600:five_prime_UTR | 55.0% | |
| ATCAGAGAGTGGGAAAGCCG+CGG | - | chr5_3:46805224-46805243 | Msa0814600:intron | 55.0% | |
| GGCGAAGAAACTCGAGGAAC+AGG | - | chr5_3:46805571-46805590 | Msa0814600:intron | 55.0% | |
| AACTCGAGGAACAGGTGGAG+AGG | - | chr5_3:46805579-46805598 | Msa0814600:intron | 55.0% | |
| TGCTCCGAATGCGTGAATGC+AGG | + | chr5_3:46805931-46805950 | None:intergenic | 55.0% | |
| ! | TCACGCATTCGGAGCATCAG+TGG | - | chr5_3:46805935-46805954 | Msa0814600:intron | 55.0% |
| AGTCGGGACAGTCGCATTCA+CGG | + | chr5_3:46806039-46806058 | None:intergenic | 55.0% | |
| GGCCTGGGTCAGTGGAATAC+AGG | - | chr5_3:46803305-46803324 | Msa0814600:CDS | 60.0% | |
| GGCCTGTATTCCACTGACCC+AGG | + | chr5_3:46803310-46803329 | None:intergenic | 60.0% | |
| GAGGTAGGTGGTTGCTGCTC+TGG | - | chr5_3:46803463-46803482 | Msa0814600:CDS | 60.0% | |
| GGAGAGGGCAAAGTTGAGGG+CGG | + | chr5_3:46804303-46804322 | None:intergenic | 60.0% | |
| GTGGTGACACAGCCTCACTC+GGG | - | chr5_3:46804847-46804866 | Msa0814600:CDS | 60.0% | |
| TGGTGACACAGCCTCACTCG+GGG | - | chr5_3:46804848-46804867 | Msa0814600:CDS | 60.0% | |
| ! | AGCAGCTGAAGAGAAGCGCG+AGG | - | chr5_3:46805622-46805641 | Msa0814600:intron | 60.0% |
| ! | AAGAGAAGCGCGAGGCGATC+AGG | - | chr5_3:46805630-46805649 | Msa0814600:intron | 60.0% |
| ATTCCCCGCATTCGCGGAGT+CGG | + | chr5_3:46806056-46806075 | None:intergenic | 60.0% | |
| TGACACAGCCTCACTCGGGG+AGG | - | chr5_3:46804851-46804870 | Msa0814600:CDS | 65.0% | |
| TCGAAGCTCCTCCCCGAGTG+AGG | + | chr5_3:46804862-46804881 | None:intergenic | 65.0% | |
| CTGTCCCGACTCCGCGAATG+CGG | - | chr5_3:46806048-46806067 | Msa0814600:five_prime_UTR | 65.0% | |
| TGTCCCGACTCCGCGAATGC+GGG | - | chr5_3:46806049-46806068 | Msa0814600:five_prime_UTR | 65.0% | |
| TTCCCCGCATTCGCGGAGTC+GGG | + | chr5_3:46806055-46806074 | None:intergenic | 65.0% | |
| GTCCCGACTCCGCGAATGCG+GGG | - | chr5_3:46806050-46806069 | Msa0814600:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 46802333 | 46806232 | 46802333 | ID=Msa0814600;Name=Msa0814600 |
| chr5_3 | mRNA | 46802333 | 46806232 | 46802333 | ID=Msa0814600-mRNA-1;Parent=Msa0814600;Name=Msa0814600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=259|1|1|1|0.5|0.2|5|460|604 |
| chr5_3 | exon | 46802333 | 46802543 | 46802333 | ID=Msa0814600-mRNA-1:exon:14180;Parent=Msa0814600-mRNA-1 |
| chr5_3 | exon | 46802568 | 46804504 | 46802568 | ID=Msa0814600-mRNA-1:exon:14179;Parent=Msa0814600-mRNA-1 |
| chr5_3 | exon | 46804846 | 46804957 | 46804846 | ID=Msa0814600-mRNA-1:exon:14178;Parent=Msa0814600-mRNA-1 |
| chr5_3 | exon | 46805062 | 46805110 | 46805062 | ID=Msa0814600-mRNA-1:exon:14177;Parent=Msa0814600-mRNA-1 |
| chr5_3 | exon | 46806008 | 46806232 | 46806008 | ID=Msa0814600-mRNA-1:exon:14176;Parent=Msa0814600-mRNA-1 |
| chr5_3 | five_prime_UTR | 46806008 | 46806232 | 46806008 | ID=Msa0814600-mRNA-1:five_prime_utr;Parent=Msa0814600-mRNA-1 |
| chr5_3 | five_prime_UTR | 46805077 | 46805110 | 46805077 | ID=Msa0814600-mRNA-1:five_prime_utr;Parent=Msa0814600-mRNA-1 |
| chr5_3 | CDS | 46805062 | 46805076 | 46805062 | ID=Msa0814600-mRNA-1:cds;Parent=Msa0814600-mRNA-1 |
| chr5_3 | CDS | 46804846 | 46804957 | 46804846 | ID=Msa0814600-mRNA-1:cds;Parent=Msa0814600-mRNA-1 |
| chr5_3 | CDS | 46802817 | 46804504 | 46802817 | ID=Msa0814600-mRNA-1:cds;Parent=Msa0814600-mRNA-1 |
| chr5_3 | three_prime_UTR | 46802568 | 46802816 | 46802568 | ID=Msa0814600-mRNA-1:three_prime_utr;Parent=Msa0814600-mRNA-1 |
| chr5_3 | three_prime_UTR | 46802333 | 46802543 | 46802333 | ID=Msa0814600-mRNA-1:three_prime_utr;Parent=Msa0814600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
