AlfalfaGEDB | Msa1366540

M. sativa cultivar zhongmu-4 / Msa1366540

KEGG: K02883
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0031090 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF17135.7

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1366540	XP_013450365.1	100.000	188	0	0	1	188	1	188	1.79e-130	374

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1366540	sp\|Q940B0\|RL183_ARATH	84.574	188	28	1	1	188	1	187	2.30e-112	320

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1366540	A0A072U5K2	100.000	188	0	0	1	188	1	188	8.54e-131	374

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003030	Msa1366540	0.814122	1.809486e-51	-8.615850e-47
Msa0042510	Msa1366540	0.897509	1.312243e-76	-8.615850e-47
Msa0079560	Msa1366540	0.907519	4.640964e-81	-8.615850e-47
Msa1363930	Msa1366540	0.851757	7.208918e-61	-8.615850e-47
Msa1366540	Msa1387750	0.887981	8.842882e-73	-8.615850e-47
Msa1366540	Msa1390760	0.813161	2.944710e-51	-8.615850e-47
Msa1366540	Msa1403520	0.807649	4.558381e-50	-8.615850e-47
Msa1366540	Msa1407550	0.857210	1.905758e-62	-8.615850e-47
Msa1366540	Msa1413570	0.855856	4.762512e-62	-8.615850e-47
Msa1366540	Msa1446510	0.809667	1.689500e-50	-8.615850e-47
Msa1366540	Msa1462580	0.816200	6.250675e-52	-8.615850e-47
Msa1366540	Msa1463510	0.817239	3.655945e-52	-8.615850e-47
Msa1366540	Msa1465890	0.835502	1.616319e-56	-8.615850e-47
Msa0619230	Msa1366540	0.808342	3.246373e-50	-8.615850e-47
Msa0621190	Msa1366540	0.871721	5.509315e-67	-8.615850e-47
Msa0656450	Msa1366540	0.861747	8.255783e-64	-8.615850e-47
Msa0700370	Msa1366540	0.880441	5.475520e-70	-8.615850e-47
Msa0127230	Msa1366540	0.910181	2.497231e-82	-8.615850e-47
Msa0146910	Msa1366540	0.813240	2.828959e-51	-8.615850e-47
Msa0182100	Msa1366540	0.803654	3.143706e-49	-8.615850e-47
Msa1227350	Msa1366540	0.824230	9.032655e-54	-8.615850e-47
Msa1284800	Msa1366540	0.830965	2.182178e-55	-8.615850e-47
Msa0373350	Msa1366540	0.880484	5.285760e-70	-8.615850e-47
Msa0377610	Msa1366540	0.826225	3.048553e-54	-8.615850e-47
Msa0387290	Msa1366540	0.824946	6.128459e-54	-8.615850e-47
Msa0388520	Msa1366540	0.824815	6.580427e-54	-8.615850e-47
Msa0388540	Msa1366540	0.843926	1.037705e-58	-8.615850e-47
Msa0416470	Msa1366540	0.809126	2.207816e-50	-8.615850e-47
Msa0421920	Msa1366540	0.859538	3.860076e-63	-8.615850e-47
Msa0426820	Msa1366540	0.855743	5.139880e-62	-8.615850e-47
Msa0427380	Msa1366540	0.807733	4.376761e-50	-8.615850e-47
Msa0467740	Msa1366540	0.880995	3.465280e-70	-8.615850e-47
Msa0477670	Msa1366540	0.814110	1.819940e-51	-8.615850e-47
Msa0987570	Msa1366540	0.825912	3.619471e-54	-8.615850e-47
Msa0998890	Msa1366540	0.836656	8.234763e-57	-8.615850e-47
Msa0270160	Msa1366540	0.804835	1.785396e-49	-8.615850e-47
Msa1144630	Msa1366540	0.852543	4.309538e-61	-8.615850e-47
Msa1165210	Msa1366540	0.810166	1.319507e-50	-8.615850e-47
Msa1165700	Msa1366540	0.917920	2.946361e-86	-8.615850e-47
Msa0511760	Msa1366540	0.821370	4.186215e-53	-8.615850e-47
Msa0514130	Msa1366540	0.876527	1.301307e-68	-8.615850e-47
Msa0574780	Msa1366540	0.827084	1.901658e-54	-8.615850e-47
Msa0578010	Msa1366540	0.839990	1.138464e-57	-8.615850e-47
Msa0930360	Msa1366540	0.854193	1.449088e-61	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1366540	MtrunA17_Chr7g0269451	100.000	188	0	0	1	188	1	188	1.64e-134	374
Msa1366540	MtrunA17_Chr1g0192271	91.489	188	15	1	1	188	1	187	8.09e-122	342
Msa1366540	MtrunA17_Chr7g0272381	86.702	188	24	1	1	188	1	187	6.74e-117	329

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1366540	AT5G27850.1	84.574	188	28	1	1	188	1	187	2.34e-113	320
Msa1366540	AT3G05590.1	83.511	188	30	1	1	188	1	187	3.75e-111	315
Msa1366540	AT2G47570.1	77.540	187	40	2	3	188	1	186	9.79e-101	288
Msa1366540	AT5G27850.2	82.963	135	22	1	54	188	1	134	1.24e-77	228
Msa1366540	AT3G05590.3	82.222	135	23	1	54	188	1	134	4.82e-77	227
Msa1366540	AT3G05590.2	82.222	135	23	1	54	188	1	134	4.82e-77	227

Find 84 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCGGTACGTTTAGTCTTCT+TGG	0.192478	tig0018459:+90861	None:intergenic
TTATGAAGTACCTGCAATTA+AGG	0.289178	tig0018459:-90042	Msa1366540:CDS
CTGGCTCTTAGAGCTCCTTT+AGG	0.297513	tig0018459:-89942	Msa1366540:CDS
AGGTAGATATCATTGGATTT+TGG	0.303386	tig0018459:+90838	None:intergenic
TTGCACTTTAAATGCAATAT+AGG	0.304283	tig0018459:+88776	None:intergenic
AGCCACCACTATCACTTTCT+AGG	0.308293	tig0018459:-90617	Msa1366540:CDS
TGGCTCTTAGAGCTCCTTTA+GGG	0.321716	tig0018459:-89941	Msa1366540:CDS
GTGCCGTGACAGATGACATT+AGG	0.331949	tig0018459:-90067	Msa1366540:CDS
ATGTTTCAGGTTCTTCTTAG+AGG	0.334993	tig0018459:-89280	Msa1366540:intron
TGACATTGAGATATGATAAT+AGG	0.341797	tig0018459:+89080	None:intergenic
GACTGAAAGTAATTTCAATA+AGG	0.349360	tig0018459:-90676	Msa1366540:CDS
AGGCTTTAAAGTTTGAGTTT+TGG	0.349919	tig0018459:-89125	Msa1366540:exon
CTGCGGCCGAACGAGAGAAA+TGG	0.359660	tig0018459:+91033	None:intergenic
AGAGCAGTTACCTTAATTGC+AGG	0.362185	tig0018459:+90032	None:intergenic
TTATTTGAGTTTAAAGTAGT+AGG	0.365650	tig0018459:-88818	Msa1366540:three_prime_UTR
TCAATAAGGTTATCCTTAAG+AGG	0.371127	tig0018459:-90662	Msa1366540:CDS
TGCGGCCGAACGAGAGAAAT+GGG	0.372708	tig0018459:+91034	None:intergenic
TGCTCATGAAAAGCCTCTTA+AGG	0.380870	tig0018459:+90649	None:intergenic
TTGAAGCCGCTAGAGGAAAA+AGG	0.383923	tig0018459:-89156	Msa1366540:CDS
CTACCTCAAGCTTCTCGTTA+AGG	0.389550	tig0018459:-90821	Msa1366540:intron
TGCCGTGACAGATGACATTA+GGG	0.403697	tig0018459:-90066	Msa1366540:CDS
CAATTAAGGTAACTGCTCTA+AGG	0.406837	tig0018459:-90028	Msa1366540:CDS
AAGCTTGAGGTAGATATCAT+TGG	0.411467	tig0018459:+90831	None:intergenic
GTGCCTCACCTTTGATCAGC+TGG	0.415929	tig0018459:-89961	Msa1366540:CDS
TCTTGTGCGCTCGTAGTGTT+GGG	0.441971	tig0018459:-88873	Msa1366540:three_prime_UTR
TTCTTGTGCGCTCGTAGTGT+TGG	0.445083	tig0018459:-88874	Msa1366540:three_prime_UTR
TCCTTCTCCCCAAGTGGAAA+AGG	0.454454	tig0018459:-88993	Msa1366540:three_prime_UTR
ATTAAACATCTCTGACACTA+AGG	0.464619	tig0018459:-88712	Msa1366540:three_prime_UTR
GGTAAGATTGCCGTAGTTGT+TGG	0.465007	tig0018459:-90089	Msa1366540:CDS
TGCTCTAAGGTTCACCGAAA+AGG	0.469427	tig0018459:-90015	Msa1366540:CDS
TTCGCAGGGTATCGATTTGA+AGG	0.470824	tig0018459:-90896	Msa1366540:intron
CTAGCCCCATTTCTCTCGTT+CGG	0.479520	tig0018459:-91039	Msa1366540:five_prime_UTR
AAGCACTTTGGACGAGCTCC+TGG	0.482073	tig0018459:-89232	Msa1366540:CDS
CGTGAGGCTGTCAAGCACTT+TGG	0.482505	tig0018459:-89244	Msa1366540:CDS
CAGGGTATCGATTTGAAGGC+AGG	0.483139	tig0018459:-90892	Msa1366540:CDS
TAAGGTTCACCGAAAAGGCC+AGG	0.486544	tig0018459:-90010	Msa1366540:CDS
GTGCGCTCGTAGTGTTGGGA+AGG	0.487077	tig0018459:-88869	Msa1366540:three_prime_UTR
CATACCGTGTTCTGCCCTAA+AGG	0.491830	tig0018459:+89927	None:intergenic
CGCTCGTAGTGTTGGGAAGG+GGG	0.492651	tig0018459:-88866	Msa1366540:three_prime_UTR
CCAAGTGGAAAAGGAATGAA+TGG	0.497670	tig0018459:-88984	Msa1366540:three_prime_UTR
AGCCTTCTCAATTCTAGCCC+TGG	0.500353	tig0018459:+89992	None:intergenic
GCGATTATATACCTTTCCCT+TGG	0.506650	tig0018459:+90581	None:intergenic
CGAACGAGAGAAATGGGGCT+AGG	0.509790	tig0018459:+91040	None:intergenic
ATTGTTCACAACACCACAAA+GGG	0.510119	tig0018459:+89033	None:intergenic
GCGCTCGTAGTGTTGGGAAG+GGG	0.517946	tig0018459:-88867	Msa1366540:three_prime_UTR
TGCGCTCGTAGTGTTGGGAA+GGG	0.527136	tig0018459:-88868	Msa1366540:three_prime_UTR
CAGTCCTTCGAACAAGGAAA+CGG	0.531384	tig0018459:+90694	None:intergenic
TGAGATATGATAATAGGAAA+GGG	0.531546	tig0018459:+89086	None:intergenic
TGGAAAAGGAATGAATGGAT+TGG	0.540570	tig0018459:-88979	Msa1366540:three_prime_UTR
TTGAGATATGATAATAGGAA+AGG	0.542200	tig0018459:+89085	None:intergenic
TACTTTCAGTCCTTCGAACA+AGG	0.547564	tig0018459:+90688	None:intergenic
ATCAACCTAGAAAGTGATAG+TGG	0.548653	tig0018459:+90612	None:intergenic
CTAGAATTGAGAAGGCTGGT+GGG	0.553032	tig0018459:-89986	Msa1366540:CDS
AGGTTGATTCGTTACACCAA+GGG	0.558600	tig0018459:-90597	Msa1366540:CDS
AAAGTGCTTGACAGCCTCAC+GGG	0.558822	tig0018459:+89246	None:intergenic
GAACGAGAGAAATGGGGCTA+GGG	0.565419	tig0018459:+91041	None:intergenic
GATTCGTTACACCAAGGGAA+AGG	0.565427	tig0018459:-90592	Msa1366540:intron
TATACCGTTTCCTTGTTCGA+AGG	0.566828	tig0018459:-90698	Msa1366540:CDS
TTAAACATCTCTGACACTAA+GGG	0.569827	tig0018459:-88711	Msa1366540:three_prime_UTR
GTGTTGCTGTGTGGTACACC+AGG	0.572600	tig0018459:+89214	None:intergenic
AGGGCTAGAATTGAGAAGGC+TGG	0.575107	tig0018459:-89990	Msa1366540:CDS
CAAAGTGCTTGACAGCCTCA+CGG	0.580659	tig0018459:+89245	None:intergenic
CGAAAGGTTGAAGCCGCTAG+AGG	0.583684	tig0018459:-89163	Msa1366540:CDS
GCTAGAATTGAGAAGGCTGG+TGG	0.586828	tig0018459:-89987	Msa1366540:CDS
TCTAAGAGCCAGCTGATCAA+AGG	0.589919	tig0018459:+89953	None:intergenic
TAGAATTGAGAAGGCTGGTG+GGG	0.601753	tig0018459:-89985	Msa1366540:CDS
GAAGCTTCTTCTTCTAGCTG+CGG	0.601908	tig0018459:+91016	None:intergenic
TGTCACGGCACCAACAACTA+CGG	0.603846	tig0018459:+90079	None:intergenic
TTAGCGTCCTTCTCCCCAAG+TGG	0.609019	tig0018459:-88999	Msa1366540:three_prime_UTR
AACCCTAATGTCATCTGTCA+CGG	0.612086	tig0018459:+90064	None:intergenic
GGCCAGGGCTAGAATTGAGA+AGG	0.617622	tig0018459:-89994	Msa1366540:CDS
AGCTCCTTTAGGGCAGAACA+CGG	0.621376	tig0018459:-89931	Msa1366540:intron
AACACTAAGCCCTATGTCCG+TGG	0.624133	tig0018459:-89196	Msa1366540:CDS
AAGGTTCACCGAAAAGGCCA+GGG	0.631182	tig0018459:-90009	Msa1366540:CDS
ATACCTTAACGAGAAGCTTG+AGG	0.643723	tig0018459:+90818	None:intergenic
TAGGTTGATTCGTTACACCA+AGG	0.646840	tig0018459:-90598	Msa1366540:CDS
AATTGTTCACAACACCACAA+AGG	0.654715	tig0018459:+89032	None:intergenic
AACCTAGAAAGTGATAGTGG+TGG	0.668105	tig0018459:+90615	None:intergenic
AAGAAGAAGCTTCTTCACCA+TGG	0.669291	tig0018459:-91006	Msa1366540:intron
GGGGAGTTGAACTTGAAGCA+GGG	0.669854	tig0018459:-88847	Msa1366540:three_prime_UTR
GAGCCAGCTGATCAAAGGTG+AGG	0.684975	tig0018459:+89958	None:intergenic
GCGGCCGAACGAGAGAAATG+GGG	0.685446	tig0018459:+91035	None:intergenic
GGTATCGATTTGAAGGCAGG+AGG	0.701621	tig0018459:-90889	Msa1366540:CDS
TAGGGCTTAGTGTTGCTGTG+TGG	0.715390	tig0018459:+89205	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAGTTGTATTTATAACAA+AGG	-	tig0018459:89239-89258	Msa1366540:CDS	15.0%
!!!	TTTACTTTGTTTTGAAATAT+TGG	-	tig0018459:90134-90153	Msa1366540:intron	15.0%
!!!	TGGTAAACATATTATTTTAT+AGG	+	tig0018459:90222-90241	None:intergenic	15.0%
!!	ATAAGTTGTATTTATAACAA+AGG	-	tig0018459:89239-89258	Msa1366540:CDS	15.0%
!!!	TTTACTTTGTTTTGAAATAT+TGG	-	tig0018459:90134-90153	Msa1366540:intron	15.0%
!!!	TGGTAAACATATTATTTTAT+AGG	+	tig0018459:90222-90241	None:intergenic	15.0%
!!	ATGCAATAGCTTATAAAAAT+GGG	-	tig0018459:89339-89358	Msa1366540:intron	20.0%
!!	AAAAAAAAAGCCTATAACAT+GGG	+	tig0018459:89504-89523	None:intergenic	20.0%
!!	TAAAAAAAAAGCCTATAACA+TGG	+	tig0018459:89505-89524	None:intergenic	20.0%
!!!	TGTTATGAACTTTTAATCTT+TGG	+	tig0018459:89967-89986	None:intergenic	20.0%
!!!	TATTATTTTATAGGCTGTAT+TGG	+	tig0018459:90213-90232	None:intergenic	20.0%
!!	TACTAAAGCAAAATAAAAAC+AGG	+	tig0018459:90261-90280	None:intergenic	20.0%
!!	TAAAAAAAGGCAACAAAAAT+AGG	+	tig0018459:90363-90382	None:intergenic	20.0%
!!	CCTAAAGTTGTAATAAAAAA+AGG	+	tig0018459:90376-90395	None:intergenic	20.0%
!!!	CCTTTTTTTATTACAACTTT+AGG	-	tig0018459:90373-90392	Msa1366540:intron	20.0%
!!!	TTTTCTTGTATTAATGTTTC+AGG	-	tig0018459:90471-90490	Msa1366540:intron	20.0%
!!!	TTATTTGAGTTTAAAGTAGT+AGG	-	tig0018459:90946-90965	Msa1366540:intron	20.0%
!!!	CAATTTTATATGTCATTTGT+GGG	-	tig0018459:91008-91027	Msa1366540:exon	20.0%
!!	ATGCAATAGCTTATAAAAAT+GGG	-	tig0018459:89339-89358	Msa1366540:intron	20.0%
!!	AAAAAAAAAGCCTATAACAT+GGG	+	tig0018459:89504-89523	None:intergenic	20.0%
!!	TAAAAAAAAAGCCTATAACA+TGG	+	tig0018459:89505-89524	None:intergenic	20.0%
!!!	TGTTATGAACTTTTAATCTT+TGG	+	tig0018459:89967-89986	None:intergenic	20.0%
!!!	TATTATTTTATAGGCTGTAT+TGG	+	tig0018459:90213-90232	None:intergenic	20.0%
!!	TACTAAAGCAAAATAAAAAC+AGG	+	tig0018459:90261-90280	None:intergenic	20.0%
!!	TAAAAAAAGGCAACAAAAAT+AGG	+	tig0018459:90363-90382	None:intergenic	20.0%
!!	CCTAAAGTTGTAATAAAAAA+AGG	+	tig0018459:90376-90395	None:intergenic	20.0%
!!!	CCTTTTTTTATTACAACTTT+AGG	-	tig0018459:90373-90392	Msa1366540:intron	20.0%
!!!	TTTTCTTGTATTAATGTTTC+AGG	-	tig0018459:90471-90490	Msa1366540:intron	20.0%
!!!	TTATTTGAGTTTAAAGTAGT+AGG	-	tig0018459:90946-90965	Msa1366540:intron	20.0%
!!!	CAATTTTATATGTCATTTGT+GGG	-	tig0018459:91008-91027	Msa1366540:exon	20.0%
!	GTTATTGTGAATCTGAATAA+TGG	-	tig0018459:88992-89011	Msa1366540:three_prime_UTR	25.0%
!	GACTGAAAGTAATTTCAATA+AGG	-	tig0018459:89088-89107	Msa1366540:three_prime_UTR	25.0%
!	GATGCAATAGCTTATAAAAA+TGG	-	tig0018459:89338-89357	Msa1366540:intron	25.0%
!!!	TCACTTTTTTTCTTTCTTTC+TGG	-	tig0018459:89643-89662	Msa1366540:intron	25.0%
!!!	TTTTCTTTCTTTCTGGTATT+AGG	-	tig0018459:89650-89669	Msa1366540:intron	25.0%
!!!	TTGCTGTAATTTTAGAAGTT+TGG	-	tig0018459:89919-89938	Msa1366540:intron	25.0%
!!!	AATTTTAGAAGTTTGGAAGT+TGG	-	tig0018459:89926-89945	Msa1366540:intron	25.0%
!	AATGACTAGAATGATAAATG+TGG	-	tig0018459:90092-90111	Msa1366540:CDS	25.0%
!	ACAAAGTAAAACAAAAACAC+AGG	+	tig0018459:90124-90143	None:intergenic	25.0%
!!	CAGAAAGTATAACAGTTATA+AGG	+	tig0018459:90188-90207	None:intergenic	25.0%
!!	TTATTACAACTTTAGGAGAA+AGG	-	tig0018459:90380-90399	Msa1366540:intron	25.0%
!	TGAGATATGATAATAGGAAA+GGG	+	tig0018459:90681-90700	None:intergenic	25.0%
!	TTGAGATATGATAATAGGAA+AGG	+	tig0018459:90682-90701	None:intergenic	25.0%
!	TGACATTGAGATATGATAAT+AGG	+	tig0018459:90687-90706	None:intergenic	25.0%
!	TTGCACTTTAAATGCAATAT+AGG	+	tig0018459:90991-91010	None:intergenic	25.0%
!!!	GCAATTTTATATGTCATTTG+TGG	-	tig0018459:91007-91026	Msa1366540:exon	25.0%
!	GTTATTGTGAATCTGAATAA+TGG	-	tig0018459:88992-89011	Msa1366540:three_prime_UTR	25.0%
!	GACTGAAAGTAATTTCAATA+AGG	-	tig0018459:89088-89107	Msa1366540:three_prime_UTR	25.0%
!	GATGCAATAGCTTATAAAAA+TGG	-	tig0018459:89338-89357	Msa1366540:intron	25.0%
!!!	TCACTTTTTTTCTTTCTTTC+TGG	-	tig0018459:89643-89662	Msa1366540:intron	25.0%
!!!	TTTTCTTTCTTTCTGGTATT+AGG	-	tig0018459:89650-89669	Msa1366540:intron	25.0%
!!!	TTGCTGTAATTTTAGAAGTT+TGG	-	tig0018459:89919-89938	Msa1366540:intron	25.0%
!!!	AATTTTAGAAGTTTGGAAGT+TGG	-	tig0018459:89926-89945	Msa1366540:intron	25.0%
!	AATGACTAGAATGATAAATG+TGG	-	tig0018459:90092-90111	Msa1366540:CDS	25.0%
!	ACAAAGTAAAACAAAAACAC+AGG	+	tig0018459:90124-90143	None:intergenic	25.0%
!!	CAGAAAGTATAACAGTTATA+AGG	+	tig0018459:90188-90207	None:intergenic	25.0%
!!	TTATTACAACTTTAGGAGAA+AGG	-	tig0018459:90380-90399	Msa1366540:intron	25.0%
!	TGAGATATGATAATAGGAAA+GGG	+	tig0018459:90681-90700	None:intergenic	25.0%
!	TTGAGATATGATAATAGGAA+AGG	+	tig0018459:90682-90701	None:intergenic	25.0%
!	TGACATTGAGATATGATAAT+AGG	+	tig0018459:90687-90706	None:intergenic	25.0%
!	TTGCACTTTAAATGCAATAT+AGG	+	tig0018459:90991-91010	None:intergenic	25.0%
!!!	GCAATTTTATATGTCATTTG+TGG	-	tig0018459:91007-91026	Msa1366540:exon	25.0%
	TCGGAGTTAGTTATAAGAAA+TGG	+	tig0018459:88817-88836	None:intergenic	30.0%
!	AGGTAGATATCATTGGATTT+TGG	+	tig0018459:88929-88948	None:intergenic	30.0%
	CAAGAGTAGAAAATGAATGA+AGG	+	tig0018459:88973-88992	None:intergenic	30.0%
	TCAATAAGGTTATCCTTAAG+AGG	-	tig0018459:89102-89121	Msa1366540:three_prime_UTR	30.0%
	TAAGTTAGCATTTAGACTTC+TGG	-	tig0018459:89308-89327	Msa1366540:intron	30.0%
	CTTGAACTATTATCTAGACT+GGG	+	tig0018459:89365-89384	None:intergenic	30.0%
	TCAAATAAGCGAATCAAAAC+AGG	-	tig0018459:89478-89497	Msa1366540:intron	30.0%
!	TGCATGTATGCTTTTAGATA+CGG	-	tig0018459:89556-89575	Msa1366540:intron	30.0%
!!	GCTTTTAGATACGGTTTTAT+TGG	-	tig0018459:89565-89584	Msa1366540:intron	30.0%
!	TTATGAAGTACCTGCAATTA+AGG	-	tig0018459:89722-89741	Msa1366540:intron	30.0%
	CAATTGCATGAAGTTTAGTT+TGG	+	tig0018459:90000-90019	None:intergenic	30.0%
	AAAACATGACTTCATACAAG+TGG	+	tig0018459:90037-90056	None:intergenic	30.0%
!!	TTGTCTTAATTTGCAAAGAG+TGG	+	tig0018459:90429-90448	None:intergenic	30.0%
	ATTAAGACAACATACATCTG+AGG	-	tig0018459:90439-90458	Msa1366540:intron	30.0%
!!!	AGGCTTTAAAGTTTGAGTTT+TGG	-	tig0018459:90639-90658	Msa1366540:CDS	30.0%
	ATTAAACATCTCTGACACTA+AGG	-	tig0018459:91052-91071	Msa1366540:five_prime_UTR	30.0%
	TTAAACATCTCTGACACTAA+GGG	-	tig0018459:91053-91072	Msa1366540:five_prime_UTR	30.0%
	TCGGAGTTAGTTATAAGAAA+TGG	+	tig0018459:88817-88836	None:intergenic	30.0%
!	AGGTAGATATCATTGGATTT+TGG	+	tig0018459:88929-88948	None:intergenic	30.0%
	CAAGAGTAGAAAATGAATGA+AGG	+	tig0018459:88973-88992	None:intergenic	30.0%
	TCAATAAGGTTATCCTTAAG+AGG	-	tig0018459:89102-89121	Msa1366540:three_prime_UTR	30.0%
	TAAGTTAGCATTTAGACTTC+TGG	-	tig0018459:89308-89327	Msa1366540:intron	30.0%
	CTTGAACTATTATCTAGACT+GGG	+	tig0018459:89365-89384	None:intergenic	30.0%
	TCAAATAAGCGAATCAAAAC+AGG	-	tig0018459:89478-89497	Msa1366540:intron	30.0%
!	TGCATGTATGCTTTTAGATA+CGG	-	tig0018459:89556-89575	Msa1366540:intron	30.0%
!!	GCTTTTAGATACGGTTTTAT+TGG	-	tig0018459:89565-89584	Msa1366540:intron	30.0%
!	TTATGAAGTACCTGCAATTA+AGG	-	tig0018459:89722-89741	Msa1366540:intron	30.0%
	CAATTGCATGAAGTTTAGTT+TGG	+	tig0018459:90000-90019	None:intergenic	30.0%
	AAAACATGACTTCATACAAG+TGG	+	tig0018459:90037-90056	None:intergenic	30.0%
!!	TTGTCTTAATTTGCAAAGAG+TGG	+	tig0018459:90429-90448	None:intergenic	30.0%
	ATTAAGACAACATACATCTG+AGG	-	tig0018459:90439-90458	Msa1366540:intron	30.0%
!!!	AGGCTTTAAAGTTTGAGTTT+TGG	-	tig0018459:90639-90658	Msa1366540:CDS	30.0%
	ATTAAACATCTCTGACACTA+AGG	-	tig0018459:91052-91071	Msa1366540:five_prime_UTR	30.0%
	TTAAACATCTCTGACACTAA+GGG	-	tig0018459:91053-91072	Msa1366540:five_prime_UTR	30.0%
!!	GATATCATTGGATTTTGGTG+CGG	+	tig0018459:88924-88943	None:intergenic	35.0%
	AAGCTTGAGGTAGATATCAT+TGG	+	tig0018459:88936-88955	None:intergenic	35.0%
	ATCAACCTAGAAAGTGATAG+TGG	+	tig0018459:89155-89174	None:intergenic	35.0%
	GCTTGAACTATTATCTAGAC+TGG	+	tig0018459:89366-89385	None:intergenic	35.0%
!	TGTTTTTCCAAACACTCGTA+CGG	-	tig0018459:89434-89453	Msa1366540:intron	35.0%
!!	GGTTGATGAAGAGATAACAT+TGG	-	tig0018459:89586-89605	Msa1366540:intron	35.0%
!	TCTTTCTTTCTGGTATTAGG+AGG	-	tig0018459:89653-89672	Msa1366540:intron	35.0%
!	CTTTCTTTCTGGTATTAGGA+GGG	-	tig0018459:89654-89673	Msa1366540:intron	35.0%
	CAATTAAGGTAACTGCTCTA+AGG	-	tig0018459:89736-89755	Msa1366540:intron	35.0%
	GACTAGAATGATAAATGTGG+AGG	-	tig0018459:90095-90114	Msa1366540:CDS	35.0%
!	TTGGATAATGCTGTTACTTG+CGG	-	tig0018459:90153-90172	Msa1366540:intron	35.0%
!	ACTTTTATACCTATCTGCTG+CGG	-	tig0018459:90299-90318	Msa1366540:intron	35.0%
!	GCGGCAAATTAGATCAATTT+TGG	-	tig0018459:90318-90337	Msa1366540:intron	35.0%
!!	ATGTTTCAGGTTCTTCTTAG+AGG	-	tig0018459:90484-90503	Msa1366540:intron	35.0%
!!!	GATTTTTTTCCACGGACATA+GGG	+	tig0018459:90580-90599	None:intergenic	35.0%
!!!	TGATTTTTTTCCACGGACAT+AGG	+	tig0018459:90581-90600	None:intergenic	35.0%
!!!	CCTTTCGTGATTTTTTTCCA+CGG	+	tig0018459:90588-90607	None:intergenic	35.0%
!!!	TGTTTTGTTTTCTCCCTTTG+TGG	-	tig0018459:90718-90737	Msa1366540:intron	35.0%
	ATTGTTCACAACACCACAAA+GGG	+	tig0018459:90734-90753	None:intergenic	35.0%
	AATTGTTCACAACACCACAA+AGG	+	tig0018459:90735-90754	None:intergenic	35.0%
!	ATTCATTCCTTTTCCACTTG+GGG	+	tig0018459:90781-90800	None:intergenic	35.0%
!	CATTCATTCCTTTTCCACTT+GGG	+	tig0018459:90782-90801	None:intergenic	35.0%
	TGGAAAAGGAATGAATGGAT+TGG	-	tig0018459:90785-90804	Msa1366540:intron	35.0%
!!!	TCATTTGTGGGTAGTTTTGT+AGG	-	tig0018459:91020-91039	Msa1366540:five_prime_UTR	35.0%
!!!	CATTTGTGGGTAGTTTTGTA+GGG	-	tig0018459:91021-91040	Msa1366540:five_prime_UTR	35.0%
!!	GATATCATTGGATTTTGGTG+CGG	+	tig0018459:88924-88943	None:intergenic	35.0%
	AAGCTTGAGGTAGATATCAT+TGG	+	tig0018459:88936-88955	None:intergenic	35.0%
	ATCAACCTAGAAAGTGATAG+TGG	+	tig0018459:89155-89174	None:intergenic	35.0%
	GCTTGAACTATTATCTAGAC+TGG	+	tig0018459:89366-89385	None:intergenic	35.0%
!	TGTTTTTCCAAACACTCGTA+CGG	-	tig0018459:89434-89453	Msa1366540:intron	35.0%
!!	GGTTGATGAAGAGATAACAT+TGG	-	tig0018459:89586-89605	Msa1366540:intron	35.0%
!	TCTTTCTTTCTGGTATTAGG+AGG	-	tig0018459:89653-89672	Msa1366540:intron	35.0%
!	CTTTCTTTCTGGTATTAGGA+GGG	-	tig0018459:89654-89673	Msa1366540:intron	35.0%
	CAATTAAGGTAACTGCTCTA+AGG	-	tig0018459:89736-89755	Msa1366540:intron	35.0%
	GACTAGAATGATAAATGTGG+AGG	-	tig0018459:90095-90114	Msa1366540:CDS	35.0%
!	TTGGATAATGCTGTTACTTG+CGG	-	tig0018459:90153-90172	Msa1366540:intron	35.0%
!	ACTTTTATACCTATCTGCTG+CGG	-	tig0018459:90299-90318	Msa1366540:intron	35.0%
!	GCGGCAAATTAGATCAATTT+TGG	-	tig0018459:90318-90337	Msa1366540:intron	35.0%
!!	ATGTTTCAGGTTCTTCTTAG+AGG	-	tig0018459:90484-90503	Msa1366540:intron	35.0%
!!!	GATTTTTTTCCACGGACATA+GGG	+	tig0018459:90580-90599	None:intergenic	35.0%
!!!	TGATTTTTTTCCACGGACAT+AGG	+	tig0018459:90581-90600	None:intergenic	35.0%
!!!	CCTTTCGTGATTTTTTTCCA+CGG	+	tig0018459:90588-90607	None:intergenic	35.0%
!!!	TGTTTTGTTTTCTCCCTTTG+TGG	-	tig0018459:90718-90737	Msa1366540:intron	35.0%
	ATTGTTCACAACACCACAAA+GGG	+	tig0018459:90734-90753	None:intergenic	35.0%
	AATTGTTCACAACACCACAA+AGG	+	tig0018459:90735-90754	None:intergenic	35.0%
!	ATTCATTCCTTTTCCACTTG+GGG	+	tig0018459:90781-90800	None:intergenic	35.0%
!	CATTCATTCCTTTTCCACTT+GGG	+	tig0018459:90782-90801	None:intergenic	35.0%
	TGGAAAAGGAATGAATGGAT+TGG	-	tig0018459:90785-90804	Msa1366540:intron	35.0%
!!!	TCATTTGTGGGTAGTTTTGT+AGG	-	tig0018459:91020-91039	Msa1366540:five_prime_UTR	35.0%
!!!	CATTTGTGGGTAGTTTTGTA+GGG	-	tig0018459:91021-91040	Msa1366540:five_prime_UTR	35.0%
	AAGAAGAAGCTTCTTCACCA+TGG	-	tig0018459:88758-88777	Msa1366540:three_prime_UTR	40.0%
	ATACCTTAACGAGAAGCTTG+AGG	+	tig0018459:88949-88968	None:intergenic	40.0%
	TATACCGTTTCCTTGTTCGA+AGG	-	tig0018459:89066-89085	Msa1366540:three_prime_UTR	40.0%
	TACTTTCAGTCCTTCGAACA+AGG	+	tig0018459:89079-89098	None:intergenic	40.0%
	TGCTCATGAAAAGCCTCTTA+AGG	+	tig0018459:89118-89137	None:intergenic	40.0%
!!	AACCTAGAAAGTGATAGTGG+TGG	+	tig0018459:89152-89171	None:intergenic	40.0%
!!	TAGGTTGATTCGTTACACCA+AGG	-	tig0018459:89166-89185	Msa1366540:CDS	40.0%
!!	AGGTTGATTCGTTACACCAA+GGG	-	tig0018459:89167-89186	Msa1366540:CDS	40.0%
	GCGATTATATACCTTTCCCT+TGG	+	tig0018459:89186-89205	None:intergenic	40.0%
!	ATAAGTACCGTACGAGTGTT+TGG	+	tig0018459:89444-89463	None:intergenic	40.0%
	TCAAAACAGGCCCATGTTAT+AGG	-	tig0018459:89491-89510	Msa1366540:intron	40.0%
	AACCCTAATGTCATCTGTCA+CGG	+	tig0018459:89703-89722	None:intergenic	40.0%
	AGAGCAGTTACCTTAATTGC+AGG	+	tig0018459:89735-89754	None:intergenic	40.0%
!	CAGGAAGTACACTAGATTTG+TGG	+	tig0018459:90242-90261	None:intergenic	40.0%
	CCGTGGAAAAAAATCACGAA+AGG	-	tig0018459:90585-90604	Msa1366540:intron	40.0%
!	CCATTCATTCCTTTTCCACT+TGG	+	tig0018459:90783-90802	None:intergenic	40.0%
	CCAAGTGGAAAAGGAATGAA+TGG	-	tig0018459:90780-90799	Msa1366540:intron	40.0%
	AAGAAGAAGCTTCTTCACCA+TGG	-	tig0018459:88758-88777	Msa1366540:three_prime_UTR	40.0%
	ATACCTTAACGAGAAGCTTG+AGG	+	tig0018459:88949-88968	None:intergenic	40.0%
	TATACCGTTTCCTTGTTCGA+AGG	-	tig0018459:89066-89085	Msa1366540:three_prime_UTR	40.0%
	TACTTTCAGTCCTTCGAACA+AGG	+	tig0018459:89079-89098	None:intergenic	40.0%
	TGCTCATGAAAAGCCTCTTA+AGG	+	tig0018459:89118-89137	None:intergenic	40.0%
!!	AACCTAGAAAGTGATAGTGG+TGG	+	tig0018459:89152-89171	None:intergenic	40.0%
!!	TAGGTTGATTCGTTACACCA+AGG	-	tig0018459:89166-89185	Msa1366540:CDS	40.0%
!!	AGGTTGATTCGTTACACCAA+GGG	-	tig0018459:89167-89186	Msa1366540:CDS	40.0%
	GCGATTATATACCTTTCCCT+TGG	+	tig0018459:89186-89205	None:intergenic	40.0%
!	ATAAGTACCGTACGAGTGTT+TGG	+	tig0018459:89444-89463	None:intergenic	40.0%
	TCAAAACAGGCCCATGTTAT+AGG	-	tig0018459:89491-89510	Msa1366540:intron	40.0%
	AACCCTAATGTCATCTGTCA+CGG	+	tig0018459:89703-89722	None:intergenic	40.0%
	AGAGCAGTTACCTTAATTGC+AGG	+	tig0018459:89735-89754	None:intergenic	40.0%
!	CAGGAAGTACACTAGATTTG+TGG	+	tig0018459:90242-90261	None:intergenic	40.0%
	CCGTGGAAAAAAATCACGAA+AGG	-	tig0018459:90585-90604	Msa1366540:intron	40.0%
!	CCATTCATTCCTTTTCCACT+TGG	+	tig0018459:90783-90802	None:intergenic	40.0%
	CCAAGTGGAAAAGGAATGAA+TGG	-	tig0018459:90780-90799	Msa1366540:intron	40.0%
!!!	ATGGGGCTAGGGTTTTGTTT+AGG	+	tig0018459:88715-88734	None:intergenic	45.0%
!	GAAGCTTCTTCTTCTAGCTG+CGG	+	tig0018459:88751-88770	None:intergenic	45.0%
	AGAAAGAGGAGTGAGATGAG+AGG	+	tig0018459:88843-88862	None:intergenic	45.0%
!	TCCTCTTTCTCTCTTTTCGC+AGG	-	tig0018459:88853-88872	Msa1366540:three_prime_UTR	45.0%
!	CCTCTTTCTCTCTTTTCGCA+GGG	-	tig0018459:88854-88873	Msa1366540:three_prime_UTR	45.0%
!!	TTCGCAGGGTATCGATTTGA+AGG	-	tig0018459:88868-88887	Msa1366540:three_prime_UTR	45.0%
!	TGCGGTACGTTTAGTCTTCT+TGG	+	tig0018459:88906-88925	None:intergenic	45.0%
	CTACCTCAAGCTTCTCGTTA+AGG	-	tig0018459:88943-88962	Msa1366540:three_prime_UTR	45.0%
	CAGTCCTTCGAACAAGGAAA+CGG	+	tig0018459:89073-89092	None:intergenic	45.0%
	AGCCACCACTATCACTTTCT+AGG	-	tig0018459:89147-89166	Msa1366540:CDS	45.0%
	GATTCGTTACACCAAGGGAA+AGG	-	tig0018459:89172-89191	Msa1366540:CDS	45.0%
	GGTAAGATTGCCGTAGTTGT+TGG	-	tig0018459:89675-89694	Msa1366540:intron	45.0%
	TGCCGTGACAGATGACATTA+GGG	-	tig0018459:89698-89717	Msa1366540:intron	45.0%
!!	TGCTCTAAGGTTCACCGAAA+AGG	-	tig0018459:89749-89768	Msa1366540:intron	45.0%
!!	AATTCTAGCCCTGGCCTTTT+CGG	+	tig0018459:89766-89785	None:intergenic	45.0%
	CTAGAATTGAGAAGGCTGGT+GGG	-	tig0018459:89778-89797	Msa1366540:intron	45.0%
	TAGAATTGAGAAGGCTGGTG+GGG	-	tig0018459:89779-89798	Msa1366540:intron	45.0%
	TCTAAGAGCCAGCTGATCAA+AGG	+	tig0018459:89814-89833	None:intergenic	45.0%
	TGGCTCTTAGAGCTCCTTTA+GGG	-	tig0018459:89823-89842	Msa1366540:intron	45.0%
!	TCTAATTTGCCGCAGCAGAT+AGG	+	tig0018459:90311-90330	None:intergenic	45.0%
	TTGAAGCCGCTAGAGGAAAA+AGG	-	tig0018459:90608-90627	Msa1366540:CDS	45.0%
!	GCTCTTCCTTTTTCCTCTAG+CGG	+	tig0018459:90617-90636	None:intergenic	45.0%
	AGAGGAAAAAGGAAGAGCAG+AGG	-	tig0018459:90619-90638	Msa1366540:CDS	45.0%
!!!	ATGGGGCTAGGGTTTTGTTT+AGG	+	tig0018459:88715-88734	None:intergenic	45.0%
!	GAAGCTTCTTCTTCTAGCTG+CGG	+	tig0018459:88751-88770	None:intergenic	45.0%
	AGAAAGAGGAGTGAGATGAG+AGG	+	tig0018459:88843-88862	None:intergenic	45.0%
!	TCCTCTTTCTCTCTTTTCGC+AGG	-	tig0018459:88853-88872	Msa1366540:three_prime_UTR	45.0%
!	CCTCTTTCTCTCTTTTCGCA+GGG	-	tig0018459:88854-88873	Msa1366540:three_prime_UTR	45.0%
!!	TTCGCAGGGTATCGATTTGA+AGG	-	tig0018459:88868-88887	Msa1366540:three_prime_UTR	45.0%
!	TGCGGTACGTTTAGTCTTCT+TGG	+	tig0018459:88906-88925	None:intergenic	45.0%
	CTACCTCAAGCTTCTCGTTA+AGG	-	tig0018459:88943-88962	Msa1366540:three_prime_UTR	45.0%
	CAGTCCTTCGAACAAGGAAA+CGG	+	tig0018459:89073-89092	None:intergenic	45.0%
	AGCCACCACTATCACTTTCT+AGG	-	tig0018459:89147-89166	Msa1366540:CDS	45.0%
	GATTCGTTACACCAAGGGAA+AGG	-	tig0018459:89172-89191	Msa1366540:CDS	45.0%
	GGTAAGATTGCCGTAGTTGT+TGG	-	tig0018459:89675-89694	Msa1366540:intron	45.0%
	TGCCGTGACAGATGACATTA+GGG	-	tig0018459:89698-89717	Msa1366540:intron	45.0%
!!	TGCTCTAAGGTTCACCGAAA+AGG	-	tig0018459:89749-89768	Msa1366540:intron	45.0%
!!	AATTCTAGCCCTGGCCTTTT+CGG	+	tig0018459:89766-89785	None:intergenic	45.0%
	CTAGAATTGAGAAGGCTGGT+GGG	-	tig0018459:89778-89797	Msa1366540:intron	45.0%
	TAGAATTGAGAAGGCTGGTG+GGG	-	tig0018459:89779-89798	Msa1366540:intron	45.0%
	TCTAAGAGCCAGCTGATCAA+AGG	+	tig0018459:89814-89833	None:intergenic	45.0%
	TGGCTCTTAGAGCTCCTTTA+GGG	-	tig0018459:89823-89842	Msa1366540:intron	45.0%
!	TCTAATTTGCCGCAGCAGAT+AGG	+	tig0018459:90311-90330	None:intergenic	45.0%
	TTGAAGCCGCTAGAGGAAAA+AGG	-	tig0018459:90608-90627	Msa1366540:CDS	45.0%
!	GCTCTTCCTTTTTCCTCTAG+CGG	+	tig0018459:90617-90636	None:intergenic	45.0%
	AGAGGAAAAAGGAAGAGCAG+AGG	-	tig0018459:90619-90638	Msa1366540:CDS	45.0%
	GAACGAGAGAAATGGGGCTA+GGG	+	tig0018459:88726-88745	None:intergenic	50.0%
	CTAGCCCCATTTCTCTCGTT+CGG	-	tig0018459:88725-88744	Msa1366540:three_prime_UTR	50.0%
	TGTAGAGGAGGAACGTACCA+TGG	+	tig0018459:88778-88797	None:intergenic	50.0%
	TCCTCCTCTACAATCCCCAT+CGG	-	tig0018459:88786-88805	Msa1366540:three_prime_UTR	50.0%
!	TAAGAAATGGTCGCGCCGAT+GGG	+	tig0018459:88804-88823	None:intergenic	50.0%
	ATAAGAAATGGTCGCGCCGA+TGG	+	tig0018459:88805-88824	None:intergenic	50.0%
	GGAGTGAGATGAGAGGTTGT+CGG	+	tig0018459:88836-88855	None:intergenic	50.0%
	CCCTGCGAAAAGAGAGAAAG+AGG	+	tig0018459:88857-88876	None:intergenic	50.0%
!!	CAGGGTATCGATTTGAAGGC+AGG	-	tig0018459:88872-88891	Msa1366540:three_prime_UTR	50.0%
!!	GGTATCGATTTGAAGGCAGG+AGG	-	tig0018459:88875-88894	Msa1366540:three_prime_UTR	50.0%
	TGTCACGGCACCAACAACTA+CGG	+	tig0018459:89688-89707	None:intergenic	50.0%
	GTGCCGTGACAGATGACATT+AGG	-	tig0018459:89697-89716	Msa1366540:intron	50.0%
	TAAGGTTCACCGAAAAGGCC+AGG	-	tig0018459:89754-89773	Msa1366540:intron	50.0%
	AAGGTTCACCGAAAAGGCCA+GGG	-	tig0018459:89755-89774	Msa1366540:intron	50.0%
	AGCCTTCTCAATTCTAGCCC+TGG	+	tig0018459:89775-89794	None:intergenic	50.0%
	AGGGCTAGAATTGAGAAGGC+TGG	-	tig0018459:89774-89793	Msa1366540:intron	50.0%
	GCTAGAATTGAGAAGGCTGG+TGG	-	tig0018459:89777-89796	Msa1366540:intron	50.0%
!	CTGGCTCTTAGAGCTCCTTT+AGG	-	tig0018459:89822-89841	Msa1366540:intron	50.0%
!!	AGCTCCTTTAGGGCAGAACA+CGG	-	tig0018459:89833-89852	Msa1366540:intron	50.0%
	CATACCGTGTTCTGCCCTAA+AGG	+	tig0018459:89840-89859	None:intergenic	50.0%
!	ACAGCCTCACGGGCATTTTT+GGG	+	tig0018459:90511-90530	None:intergenic	50.0%
!	AAAGTGCTTGACAGCCTCAC+GGG	+	tig0018459:90521-90540	None:intergenic	50.0%
!	CAAAGTGCTTGACAGCCTCA+CGG	+	tig0018459:90522-90541	None:intergenic	50.0%
!	TAGGGCTTAGTGTTGCTGTG+TGG	+	tig0018459:90562-90581	None:intergenic	50.0%
	AACACTAAGCCCTATGTCCG+TGG	-	tig0018459:90568-90587	Msa1366540:intron	50.0%
	TCCTTCTCCCCAAGTGGAAA+AGG	-	tig0018459:90771-90790	Msa1366540:intron	50.0%
!	TCCTTTTCCACTTGGGGAGA+AGG	+	tig0018459:90775-90794	None:intergenic	50.0%
	TTCTTGTGCGCTCGTAGTGT+TGG	-	tig0018459:90890-90909	Msa1366540:CDS	50.0%
	TCTTGTGCGCTCGTAGTGTT+GGG	-	tig0018459:90891-90910	Msa1366540:CDS	50.0%
	GGGGAGTTGAACTTGAAGCA+GGG	-	tig0018459:90917-90936	Msa1366540:intron	50.0%
	GAACGAGAGAAATGGGGCTA+GGG	+	tig0018459:88726-88745	None:intergenic	50.0%
	CTAGCCCCATTTCTCTCGTT+CGG	-	tig0018459:88725-88744	Msa1366540:three_prime_UTR	50.0%
	TGTAGAGGAGGAACGTACCA+TGG	+	tig0018459:88778-88797	None:intergenic	50.0%
	TCCTCCTCTACAATCCCCAT+CGG	-	tig0018459:88786-88805	Msa1366540:three_prime_UTR	50.0%
!	TAAGAAATGGTCGCGCCGAT+GGG	+	tig0018459:88804-88823	None:intergenic	50.0%
	ATAAGAAATGGTCGCGCCGA+TGG	+	tig0018459:88805-88824	None:intergenic	50.0%
	GGAGTGAGATGAGAGGTTGT+CGG	+	tig0018459:88836-88855	None:intergenic	50.0%
	CCCTGCGAAAAGAGAGAAAG+AGG	+	tig0018459:88857-88876	None:intergenic	50.0%
!!	CAGGGTATCGATTTGAAGGC+AGG	-	tig0018459:88872-88891	Msa1366540:three_prime_UTR	50.0%
!!	GGTATCGATTTGAAGGCAGG+AGG	-	tig0018459:88875-88894	Msa1366540:three_prime_UTR	50.0%
	TGTCACGGCACCAACAACTA+CGG	+	tig0018459:89688-89707	None:intergenic	50.0%
	GTGCCGTGACAGATGACATT+AGG	-	tig0018459:89697-89716	Msa1366540:intron	50.0%
	TAAGGTTCACCGAAAAGGCC+AGG	-	tig0018459:89754-89773	Msa1366540:intron	50.0%
	AAGGTTCACCGAAAAGGCCA+GGG	-	tig0018459:89755-89774	Msa1366540:intron	50.0%
	AGCCTTCTCAATTCTAGCCC+TGG	+	tig0018459:89775-89794	None:intergenic	50.0%
	AGGGCTAGAATTGAGAAGGC+TGG	-	tig0018459:89774-89793	Msa1366540:intron	50.0%
	GCTAGAATTGAGAAGGCTGG+TGG	-	tig0018459:89777-89796	Msa1366540:intron	50.0%
!	CTGGCTCTTAGAGCTCCTTT+AGG	-	tig0018459:89822-89841	Msa1366540:intron	50.0%
!!	AGCTCCTTTAGGGCAGAACA+CGG	-	tig0018459:89833-89852	Msa1366540:intron	50.0%
	CATACCGTGTTCTGCCCTAA+AGG	+	tig0018459:89840-89859	None:intergenic	50.0%
!	ACAGCCTCACGGGCATTTTT+GGG	+	tig0018459:90511-90530	None:intergenic	50.0%
!	AAAGTGCTTGACAGCCTCAC+GGG	+	tig0018459:90521-90540	None:intergenic	50.0%
!	CAAAGTGCTTGACAGCCTCA+CGG	+	tig0018459:90522-90541	None:intergenic	50.0%
!	TAGGGCTTAGTGTTGCTGTG+TGG	+	tig0018459:90562-90581	None:intergenic	50.0%
	AACACTAAGCCCTATGTCCG+TGG	-	tig0018459:90568-90587	Msa1366540:intron	50.0%
	TCCTTCTCCCCAAGTGGAAA+AGG	-	tig0018459:90771-90790	Msa1366540:intron	50.0%
!	TCCTTTTCCACTTGGGGAGA+AGG	+	tig0018459:90775-90794	None:intergenic	50.0%
	TTCTTGTGCGCTCGTAGTGT+TGG	-	tig0018459:90890-90909	Msa1366540:CDS	50.0%
	TCTTGTGCGCTCGTAGTGTT+GGG	-	tig0018459:90891-90910	Msa1366540:CDS	50.0%
	GGGGAGTTGAACTTGAAGCA+GGG	-	tig0018459:90917-90936	Msa1366540:intron	50.0%
	CGAACGAGAGAAATGGGGCT+AGG	+	tig0018459:88727-88746	None:intergenic	55.0%
	TGCGGCCGAACGAGAGAAAT+GGG	+	tig0018459:88733-88752	None:intergenic	55.0%
!	AAGAAATGGTCGCGCCGATG+GGG	+	tig0018459:88803-88822	None:intergenic	55.0%
	GGCCAGGGCTAGAATTGAGA+AGG	-	tig0018459:89770-89789	Msa1366540:intron	55.0%
	GTGCCTCACCTTTGATCAGC+TGG	-	tig0018459:89803-89822	Msa1366540:intron	55.0%
	GAGCCAGCTGATCAAAGGTG+AGG	+	tig0018459:89809-89828	None:intergenic	55.0%
	AGGTCCCAAAAATGCCCGTG+AGG	-	tig0018459:90504-90523	Msa1366540:intron	55.0%
!	GACAGCCTCACGGGCATTTT+TGG	+	tig0018459:90512-90531	None:intergenic	55.0%
	CGTGAGGCTGTCAAGCACTT+TGG	-	tig0018459:90520-90539	Msa1366540:intron	55.0%
	AAGCACTTTGGACGAGCTCC+TGG	-	tig0018459:90532-90551	Msa1366540:intron	55.0%
!	GTGTTGCTGTGTGGTACACC+AGG	+	tig0018459:90553-90572	None:intergenic	55.0%
	CGAAAGGTTGAAGCCGCTAG+AGG	-	tig0018459:90601-90620	Msa1366540:CDS	55.0%
	TTAGCGTCCTTCTCCCCAAG+TGG	-	tig0018459:90765-90784	Msa1366540:intron	55.0%
!	TGCGCTCGTAGTGTTGGGAA+GGG	-	tig0018459:90896-90915	Msa1366540:intron	55.0%
	GGGGGAGTTGAACTTGAAGC+AGG	-	tig0018459:90916-90935	Msa1366540:intron	55.0%
	CGAACGAGAGAAATGGGGCT+AGG	+	tig0018459:88727-88746	None:intergenic	55.0%
	TGCGGCCGAACGAGAGAAAT+GGG	+	tig0018459:88733-88752	None:intergenic	55.0%
!	AAGAAATGGTCGCGCCGATG+GGG	+	tig0018459:88803-88822	None:intergenic	55.0%
	GGCCAGGGCTAGAATTGAGA+AGG	-	tig0018459:89770-89789	Msa1366540:intron	55.0%
	GTGCCTCACCTTTGATCAGC+TGG	-	tig0018459:89803-89822	Msa1366540:intron	55.0%
	GAGCCAGCTGATCAAAGGTG+AGG	+	tig0018459:89809-89828	None:intergenic	55.0%
	AGGTCCCAAAAATGCCCGTG+AGG	-	tig0018459:90504-90523	Msa1366540:intron	55.0%
!	GACAGCCTCACGGGCATTTT+TGG	+	tig0018459:90512-90531	None:intergenic	55.0%
	CGTGAGGCTGTCAAGCACTT+TGG	-	tig0018459:90520-90539	Msa1366540:intron	55.0%
	AAGCACTTTGGACGAGCTCC+TGG	-	tig0018459:90532-90551	Msa1366540:intron	55.0%
!	GTGTTGCTGTGTGGTACACC+AGG	+	tig0018459:90553-90572	None:intergenic	55.0%
	CGAAAGGTTGAAGCCGCTAG+AGG	-	tig0018459:90601-90620	Msa1366540:CDS	55.0%
	TTAGCGTCCTTCTCCCCAAG+TGG	-	tig0018459:90765-90784	Msa1366540:intron	55.0%
!	TGCGCTCGTAGTGTTGGGAA+GGG	-	tig0018459:90896-90915	Msa1366540:intron	55.0%
	GGGGGAGTTGAACTTGAAGC+AGG	-	tig0018459:90916-90935	Msa1366540:intron	55.0%
	GCGGCCGAACGAGAGAAATG+GGG	+	tig0018459:88732-88751	None:intergenic	60.0%
	CTGCGGCCGAACGAGAGAAA+TGG	+	tig0018459:88734-88753	None:intergenic	60.0%
	GCCGATGGGGATTGTAGAGG+AGG	+	tig0018459:88790-88809	None:intergenic	60.0%
!	GTGCGCTCGTAGTGTTGGGA+AGG	-	tig0018459:90895-90914	Msa1366540:intron	60.0%
!	GCGCTCGTAGTGTTGGGAAG+GGG	-	tig0018459:90897-90916	Msa1366540:intron	60.0%
!	CGCTCGTAGTGTTGGGAAGG+GGG	-	tig0018459:90898-90917	Msa1366540:intron	60.0%
	GCGGCCGAACGAGAGAAATG+GGG	+	tig0018459:88732-88751	None:intergenic	60.0%
	CTGCGGCCGAACGAGAGAAA+TGG	+	tig0018459:88734-88753	None:intergenic	60.0%
	GCCGATGGGGATTGTAGAGG+AGG	+	tig0018459:88790-88809	None:intergenic	60.0%
!	GTGCGCTCGTAGTGTTGGGA+AGG	-	tig0018459:90895-90914	Msa1366540:intron	60.0%
!	GCGCTCGTAGTGTTGGGAAG+GGG	-	tig0018459:90897-90916	Msa1366540:intron	60.0%
!	CGCTCGTAGTGTTGGGAAGG+GGG	-	tig0018459:90898-90917	Msa1366540:intron	60.0%
!	CGCGCCGATGGGGATTGTAG+AGG	+	tig0018459:88793-88812	None:intergenic	65.0%
!	CGCGCCGATGGGGATTGTAG+AGG	+	tig0018459:88793-88812	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0018459	gene	88700	91086	88700	ID=Msa1366540;Name=Msa1366540
tig0018459	mRNA	88700	91086	88700	ID=Msa1366540-mRNA-1;Parent=Msa1366540;Name=Msa1366540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=77\|1\|1\|1\|1\|1\|5\|432\|188
tig0018459	exon	88700	89293	88700	ID=Msa1366540-mRNA-1:exon:15182;Parent=Msa1366540-mRNA-1
tig0018459	exon	89932	90114	89932	ID=Msa1366540-mRNA-1:exon:15181;Parent=Msa1366540-mRNA-1
tig0018459	exon	90593	90721	90593	ID=Msa1366540-mRNA-1:exon:15180;Parent=Msa1366540-mRNA-1
tig0018459	exon	90822	90911	90822	ID=Msa1366540-mRNA-1:exon:15179;Parent=Msa1366540-mRNA-1
tig0018459	exon	91007	91086	91007	ID=Msa1366540-mRNA-1:exon:15178;Parent=Msa1366540-mRNA-1
tig0018459	five_prime_UTR	91010	91086	91010	ID=Msa1366540-mRNA-1:five_prime_utr;Parent=Msa1366540-mRNA-1
tig0018459	CDS	91007	91009	91007	ID=Msa1366540-mRNA-1:cds;Parent=Msa1366540-mRNA-1
tig0018459	CDS	90822	90911	90822	ID=Msa1366540-mRNA-1:cds;Parent=Msa1366540-mRNA-1
tig0018459	CDS	90593	90721	90593	ID=Msa1366540-mRNA-1:cds;Parent=Msa1366540-mRNA-1
tig0018459	CDS	89932	90114	89932	ID=Msa1366540-mRNA-1:cds;Parent=Msa1366540-mRNA-1
tig0018459	CDS	89132	89293	89132	ID=Msa1366540-mRNA-1:cds;Parent=Msa1366540-mRNA-1
tig0018459	three_prime_UTR	88700	89131	88700	ID=Msa1366540-mRNA-1:three_prime_utr;Parent=Msa1366540-mRNA-1

Gene Sequence

>Msa1366540

ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACTAAACGTACCGCACCAAAATCCAATGATATCTACCTCAAGCTTCTCGTTAAGCTATACCGTTTCCTTGTTCGAAGGACTGAAAGTAATTTCAATAAGGTTATCCTTAAGAGGCTTTTCATGAGCAAAGTCAACAAGCCACCACTATCACTTTCTAGGTTGATTCGTTACACCAAGGGAAAGGAGGGTAAGATTGCCGTAGTTGTTGGTGCCGTGACAGATGACATTAGGGTTTATGAAGTACCTGCAATTAAGGTAACTGCTCTAAGGTTCACCGAAAAGGCCAGGGCTAGAATTGAGAAGGCTGGTGGGGAGTGCCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTAGGGCAGAACACGGTTCTTCTTAGAGGTCCCAAAAATGCCCGTGAGGCTGTCAAGCACTTTGGACGAGCTCCTGGTGTACCACACAGCAACACTAAGCCCTATGTCCGTGGAAAAAAATCACGAAAGGTTGAAGCCGCTAGAGGAAAAAGGAAGAGCAGAGGCTTTAAAGTTTGA

Protein sequence

>Msa1366540

MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKPPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKVEAARGKRKSRGFKV*